AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1130920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130920 MtrunA17_Chr7g0276361 88.257 545 35 3 1 545 81 596 0.0 978
Msa1130920 MtrunA17_Chr8g0345901 40.451 576 255 15 1 536 103 630 2.46e-90 290
Msa1130920 MtrunA17_Chr3g0127941 33.449 574 316 19 1 532 123 672 2.92e-65 224
Msa1130920 MtrunA17_Chr4g0030271 67.273 55 18 0 1 55 156 210 1.73e-20 95.5
Msa1130920 MtrunA17_Chr4g0030271 68.000 50 16 0 484 533 715 764 3.95e-16 82.0
Msa1130920 MtrunA17_Chr1g0181811 67.273 55 18 0 1 55 152 206 2.03e-20 95.5
Msa1130920 MtrunA17_Chr1g0181811 65.957 47 13 1 489 532 690 736 6.01e-12 68.6
Msa1130920 MtrunA17_Chr4g0061021 45.783 83 45 0 8 90 107 189 6.69e-17 84.0
Msa1130920 MtrunA17_Chr4g0061021 64.000 50 18 0 486 535 501 550 6.42e-15 77.8
Msa1130920 MtrunA17_Chr3g0091641 43.373 83 47 0 8 90 98 180 6.09e-16 80.9
Msa1130920 MtrunA17_Chr3g0091641 60.000 50 20 0 486 535 494 543 1.37e-13 73.6
Msa1130920 MtrunA17_Chr1g0161431 59.574 47 19 0 9 55 87 133 2.59e-11 66.2
Msa1130920 MtrunA17_Chr2g0304841 44.262 61 34 0 9 69 94 154 4.64e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130920 AT5G24470.1 56.098 82 36 0 1 82 117 198 4.07e-25 109
Msa1130920 AT5G24470.1 61.111 72 26 1 465 534 482 553 2.39e-19 92.0
Msa1130920 AT2G46790.3 72.727 55 15 0 1 55 104 158 6.78e-24 105
Msa1130920 AT2G46790.1 72.727 55 15 0 1 55 104 158 7.59e-24 105
Msa1130920 AT2G46790.1 84.783 46 7 0 488 533 415 460 2.90e-18 88.2
Msa1130920 AT5G60100.7 70.909 55 16 0 1 55 131 185 4.31e-22 99.4
Msa1130920 AT5G60100.6 70.909 55 16 0 1 55 131 185 4.31e-22 99.4
Msa1130920 AT5G60100.4 70.909 55 16 0 1 55 131 185 4.31e-22 99.4
Msa1130920 AT5G60100.5 70.909 55 16 0 1 55 131 185 5.82e-22 99.8
Msa1130920 AT5G60100.5 45.192 104 53 1 429 532 385 484 5.40e-16 81.3
Msa1130920 AT5G60100.3 70.909 55 16 0 1 55 131 185 5.82e-22 99.8
Msa1130920 AT5G60100.3 45.192 104 53 1 429 532 385 484 5.40e-16 81.3
Msa1130920 AT5G60100.1 70.909 55 16 0 1 55 131 185 5.82e-22 99.8
Msa1130920 AT5G60100.1 45.192 104 53 1 429 532 385 484 5.40e-16 81.3
Msa1130920 AT5G60100.2 70.909 55 16 0 1 55 131 185 1.17e-21 99.0
Msa1130920 AT5G60100.2 45.192 104 53 1 429 532 412 511 5.33e-16 81.3
Msa1130920 AT2G46670.1 84.783 46 7 0 488 533 130 175 9.66e-20 87.4
Msa1130920 AT5G02810.1 63.636 55 20 0 1 55 145 199 4.36e-19 91.7
Msa1130920 AT5G02810.1 74.468 47 12 0 486 532 665 711 9.26e-16 80.9
Msa1130920 AT2G46790.5 84.783 46 7 0 488 533 258 303 8.54e-19 87.8
Msa1130920 AT2G46790.4 84.783 46 7 0 488 533 258 303 8.54e-19 87.8
Msa1130920 AT2G46790.2 84.783 46 7 0 488 533 298 343 1.86e-18 87.4
Msa1130920 AT2G46790.2 75.610 41 10 0 15 55 1 41 1.45e-16 81.6
Msa1130920 AT5G02810.2 74.468 47 12 0 486 532 521 567 6.67e-16 81.3
Msa1130920 AT5G02810.2 65.217 46 16 0 10 55 10 55 1.05e-14 77.4
Msa1130920 AT5G61380.1 58.824 51 21 0 6 56 91 141 1.18e-14 77.4
Msa1130920 AT5G61380.1 64.000 50 18 0 486 535 529 578 7.79e-14 74.7
Msa1130920 AT3G16857.3 49.153 59 29 1 1 58 30 88 6.02e-12 68.9
Msa1130920 AT3G16857.2 49.153 59 29 1 1 58 100 158 9.33e-12 68.2
Msa1130920 AT3G16857.1 49.153 59 29 1 1 58 100 158 1.03e-11 68.2

Find 169 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTCTTTCTCAAATTAA+TGG 0.118862 7_3:+83214896 None:intergenic
CCACCATCCATTTCACCTTC+TGG 0.146378 7_3:+83215268 None:intergenic
TGACTGTCTCCTACAAATTT+AGG 0.180693 7_3:-83211076 Msa1130920:three_prime_UTR
TCTTATAAATCTTATTTGTT+AGG 0.228803 7_3:-83211003 Msa1130920:three_prime_UTR
CACCATCCATTTCACCTTCT+GGG 0.266073 7_3:+83215269 None:intergenic
GAACTCTTTGTTGGAAATAA+AGG 0.268310 7_3:+83212238 None:intergenic
CTTTCTTCAGTGGTAGGTTT+AGG 0.287572 7_3:+83213123 None:intergenic
AGCAGTTCGTGATGGGTTAA+AGG 0.296495 7_3:-83214604 Msa1130920:five_prime_UTR
CAATTTGCATGATTGCTCTT+TGG 0.310062 7_3:+83213231 None:intergenic
TCTTCAAATGCATGCTCAAT+GGG 0.318207 7_3:-83214318 Msa1130920:CDS
AATTACAATCCTAAATTTGT+AGG 0.331646 7_3:+83211067 None:intergenic
GCTGGAAGAATTGCATTTGC+AGG 0.336750 7_3:-83210922 Msa1130920:three_prime_UTR
CGCCAAGTACAGGGTGAACT+TGG 0.337409 7_3:-83211284 Msa1130920:CDS
GGAACTTGTGGCAGCATGTC+TGG 0.341325 7_3:-83214252 Msa1130920:CDS
GCAGGAAAATATCACATATC+TGG 0.343384 7_3:-83212149 Msa1130920:CDS
TGCTGGAGCTATTGACTTGA+TGG 0.350704 7_3:-83213271 Msa1130920:CDS
TTGTTCCTCCCACGATGCTT+AGG 0.351488 7_3:-83214849 Msa1130920:five_prime_UTR
TTGTTAGAGCTGCTTCTCTT+TGG 0.353419 7_3:+83211627 None:intergenic
TGTGATGGTCCATCATGATT+TGG 0.359441 7_3:+83214484 None:intergenic
AGACAGATGCTATGACAAAA+AGG 0.359785 7_3:-83211585 Msa1130920:intron
TCCAGCTAAAAGCAGGATCT+TGG 0.377228 7_3:+83210939 None:intergenic
GATTCATGAGAACTCTTTGT+TGG 0.378222 7_3:+83212229 None:intergenic
GTACAACTTTGACCATTAGA+TGG 0.381258 7_3:+83211821 None:intergenic
GCTGAGTATAACCACGAAAC+TGG 0.385036 7_3:-83213575 Msa1130920:CDS
CTTATAAATCTTATTTGTTA+GGG 0.386469 7_3:-83211002 Msa1130920:three_prime_UTR
TGAATCTTTGTATTATTATG+AGG 0.390909 7_3:+83213324 None:intergenic
CATTATTCATAGAACTTTCA+AGG 0.394099 7_3:+83211693 None:intergenic
CACTTCCGATAATAAGTCTA+TGG 0.395541 7_3:-83212062 Msa1130920:CDS
TCAAACTTGAAGAACTCTTC+AGG 0.397337 7_3:+83213651 None:intergenic
TTATTATATGTAGTAGTGAT+TGG 0.398867 7_3:-83211046 Msa1130920:three_prime_UTR
ATGTTCCATAGACTTATTAT+CGG 0.405466 7_3:+83212057 None:intergenic
CTCCCACTCCCATCAATCTC+TGG 0.409076 7_3:-83214522 Msa1130920:five_prime_UTR
ATTTCAACAGGTTTAATGCT+TGG 0.410650 7_3:-83213417 Msa1130920:CDS
CTAAGCTCATTCCTGCGAAC+TGG 0.412499 7_3:+83214274 None:intergenic
TCGGAAGTGGCCCCGGTGGC+TGG 0.413092 7_3:+83212076 None:intergenic
CTTACTTAAGACTCCAGCTT+TGG 0.414971 7_3:-83214952 Msa1130920:five_prime_UTR
GCAGTTTGTTCGCCAAGTAC+AGG 0.417594 7_3:-83211294 Msa1130920:CDS
TAGAGCTGCTTCTCTTTGGC+TGG 0.417856 7_3:+83211631 None:intergenic
GTCTTCAAATGCATGCTCAA+TGG 0.427096 7_3:-83214319 Msa1130920:CDS
CTTTGTATTATTATGAGGAC+TGG 0.431448 7_3:+83213329 None:intergenic
GGGTGTGACAAAATTTCAAC+AGG 0.435384 7_3:-83213429 Msa1130920:CDS
CCCCAAGTTCACCCTGTACT+TGG 0.437798 7_3:+83211282 None:intergenic
GAGGAAATACTTGCGGGAAA+TGG 0.439122 7_3:+83211947 None:intergenic
ATGCATGACTCTCCATCTAA+TGG 0.442942 7_3:-83211833 Msa1130920:CDS
TGTTCCTCCCACGATGCTTA+GGG 0.443009 7_3:-83214848 Msa1130920:five_prime_UTR
AGTGGTGTGGGTGAAGGCCT+AGG 0.446712 7_3:-83211764 Msa1130920:CDS
CTTGAATTCTTTCCAGCCAC+CGG 0.447171 7_3:-83212088 Msa1130920:CDS
TTGCAGTTATGGCAGCAGTA+TGG 0.448329 7_3:-83212269 Msa1130920:intron
AATATCACATATCTGGTGAT+TGG 0.451094 7_3:-83212142 Msa1130920:CDS
GTGATGGTCCATCATGATTT+GGG 0.451826 7_3:+83214485 None:intergenic
CACAGAAGCACTAGAATGAT+TGG 0.453271 7_3:+83214054 None:intergenic
GAATGGGAGGAAATACTTGC+GGG 0.457257 7_3:+83211941 None:intergenic
ATTGCTTTGATCGCAAGTAT+AGG 0.461942 7_3:+83211868 None:intergenic
TTAATTTGAGAAAGAAAGAA+TGG 0.465606 7_3:-83214893 Msa1130920:five_prime_UTR
GAAAACCGTGATGAAGTGTT+AGG 0.466999 7_3:-83213369 Msa1130920:CDS
ATTTGCCTTTCTTCAGTGGT+AGG 0.468067 7_3:+83213117 None:intergenic
TTGCTTCACCTGGTCAGTAT+TGG 0.470685 7_3:+83213628 None:intergenic
ATAATAGCATCGAAAGCTGC+AGG 0.477016 7_3:-83213450 Msa1130920:CDS
CCAAGAAAACGCAGAAGCAT+TGG 0.477432 7_3:+83213083 None:intergenic
AGTTGAAAACCAGAGATTGA+TGG 0.478148 7_3:+83214513 None:intergenic
TCGATGTTCAACGCACAATC+AGG 0.479414 7_3:-83212019 Msa1130920:CDS
GAACAAACTGCCCTTTCACC+CGG 0.480092 7_3:+83211306 None:intergenic
GGTGAAATGGATGGTGGAAA+AGG 0.481661 7_3:-83215262 Msa1130920:five_prime_UTR
GTTATATACCTCCAGTTTCG+TGG 0.481995 7_3:+83213564 None:intergenic
CATAGACTTATTATCGGAAG+TGG 0.483143 7_3:+83212063 None:intergenic
AATGCCCCTTCAGCTATTGT+AGG 0.487039 7_3:-83211725 Msa1130920:CDS
TTGAATTCTTTCCAGCCACC+GGG 0.489831 7_3:-83212087 Msa1130920:CDS
AATCTTATTTGTTAGGGCTG+TGG 0.490204 7_3:-83210996 Msa1130920:three_prime_UTR
TATCTGGTGATTGGTCAGTC+TGG 0.490312 7_3:-83212133 Msa1130920:CDS
AATACTACTCATCAGTATGA+TGG 0.494147 7_3:-83212184 Msa1130920:CDS
GTTGGTCCCAGAAGGTGAAA+TGG 0.496425 7_3:-83215275 Msa1130920:five_prime_UTR
TAGAATTAACTTGCTTCACC+TGG 0.498379 7_3:+83213618 None:intergenic
GATCTAGAAGACCATTCTGC+TGG 0.510166 7_3:-83213288 Msa1130920:CDS
AACAAACTGCCCTTTCACCC+GGG 0.514303 7_3:+83211307 None:intergenic
AATCAGGCATGCATCCTAGT+TGG 0.515363 7_3:-83212003 Msa1130920:CDS
CAGTTCGCAGGAATGAGCTT+AGG 0.516350 7_3:-83214273 Msa1130920:CDS
TAACAAATAAGATTTATAAG+AGG 0.516723 7_3:+83211005 None:intergenic
ATGTGGCGAGTAGAATCATC+AGG 0.517745 7_3:+83214811 None:intergenic
TACAGGTCCGATATGAAAGC+CGG 0.519302 7_3:-83211352 Msa1130920:intron
TAGGCCTTCACCCACACCAC+TGG 0.520612 7_3:+83211766 None:intergenic
GGAGGAGGCACGTGTGAAAG+AGG 0.525414 7_3:-83215300 None:intergenic
TTCCATCACTTACGCTGCCT+AGG 0.525766 7_3:+83211747 None:intergenic
TTAATTCTATCAAATATGAA+AGG 0.528745 7_3:-83213604 Msa1130920:CDS
CAAGGAATGAACGAAGGAAG+CGG 0.528877 7_3:-83215215 Msa1130920:five_prime_UTR
AAAATAATCTCAGTAGCCTC+TGG 0.528901 7_3:+83211250 None:intergenic
GAGTCATAACGCCAGTGGTG+TGG 0.529153 7_3:-83211777 Msa1130920:CDS
ATATGAAAGCCGGAAAAGAC+AGG 0.529638 7_3:-83211342 Msa1130920:CDS
TTCTTGCCTACAATAGCTGA+AGG 0.531323 7_3:+83211719 None:intergenic
GCCAAGTACAGGGTGAACTT+GGG 0.533640 7_3:-83211283 Msa1130920:CDS
TGAATAATGATCACCATGAC+GGG 0.535250 7_3:-83211679 Msa1130920:CDS
CAACAGAAGAGAACCAAAGC+TGG 0.537521 7_3:+83214939 None:intergenic
TTCTCATTAAACCAGTTCGC+AGG 0.537821 7_3:-83214285 Msa1130920:CDS
AACGCCAGTGGTGTGGGTGA+AGG 0.538842 7_3:-83211770 Msa1130920:CDS
CAATCATTCTAGTGCTTCTG+TGG 0.540350 7_3:-83214053 Msa1130920:CDS
CTAAACCTACCACTGAAGAA+AGG 0.540787 7_3:-83213122 Msa1130920:CDS
TTCGTGATGGGTTAAAGGCA+TGG 0.540917 7_3:-83214599 Msa1130920:five_prime_UTR
GCAGTTGCAGCAGTTCGTGA+TGG 0.541035 7_3:-83214612 Msa1130920:five_prime_UTR
GCAAATTGTAGTTTCAGTGA+TGG 0.541612 7_3:-83213216 Msa1130920:CDS
GTTGAAAACCAGAGATTGAT+GGG 0.542148 7_3:+83214514 None:intergenic
AGACTGTAAATCAATAATGA+AGG 0.542183 7_3:+83211216 None:intergenic
TTGTGTATCAAAATCAAACT+TGG 0.544194 7_3:+83213185 None:intergenic
CTTCGCAACTGCGGCTACAA+AGG 0.544954 7_3:-83214775 Msa1130920:five_prime_UTR
CAGTTGCAGCAGTTCGTGAT+GGG 0.544994 7_3:-83214611 Msa1130920:five_prime_UTR
AACCAGAGATTGATGGGAGT+GGG 0.548005 7_3:+83214520 None:intergenic
TCTACAATATCGCTCCTCAC+TGG 0.548160 7_3:-83214694 Msa1130920:five_prime_UTR
CAGTTTGTTCGCCAAGTACA+GGG 0.548311 7_3:-83211293 Msa1130920:CDS
AGTCATAACGCCAGTGGTGT+GGG 0.549753 7_3:-83211776 Msa1130920:CDS
TCTTTACAAAGAGATTCTCC+TGG 0.549770 7_3:-83213153 Msa1130920:CDS
CAATATTTGCCTTTCTTCAG+TGG 0.550440 7_3:+83213113 None:intergenic
TAATTTGAGAAAGAAAGAAT+GGG 0.557433 7_3:-83214892 Msa1130920:five_prime_UTR
AAACCAGAGATTGATGGGAG+TGG 0.557513 7_3:+83214519 None:intergenic
CTTATTATCGGAAGTGGCCC+CGG 0.559482 7_3:+83212069 None:intergenic
CAATTCTTCCAGCTAAAAGC+AGG 0.559751 7_3:+83210932 None:intergenic
TTGGTTCTCTTCTGTTGATG+CGG 0.559999 7_3:-83214933 Msa1130920:five_prime_UTR
TGTATCAAAATCAAACTTGG+CGG 0.561864 7_3:+83213188 None:intergenic
TTCTCAAGATTCAGTTAGCA+CGG 0.563846 7_3:-83214341 Msa1130920:CDS
CTCAGAACCTCATCACTGGT+TGG 0.564050 7_3:-83211900 Msa1130920:CDS
TAATTCTATCAAATATGAAA+GGG 0.564328 7_3:-83213603 Msa1130920:CDS
ATGAATAATGATCACCATGA+CGG 0.565500 7_3:-83211680 Msa1130920:CDS
TCGTGATGGGTTAAAGGCAT+GGG 0.566890 7_3:-83214598 Msa1130920:five_prime_UTR
AAAACAATTGAGTGGAGGAA+GGG 0.569639 7_3:+83215047 None:intergenic
AACATTACTATTCTTTAACG+TGG 0.578122 7_3:+83214662 None:intergenic
AGTCAATAGCTCCAGCAGAA+TGG 0.578827 7_3:+83213277 None:intergenic
CTTGCCTACAATAGCTGAAG+GGG 0.579471 7_3:+83211721 None:intergenic
ACTACTTACCCAAATCATGA+TGG 0.580209 7_3:-83214493 Msa1130920:exon
ACAAACTGCCCTTTCACCCG+GGG 0.585922 7_3:+83211308 None:intergenic
ACTCAACAATGGTTAACTGT+AGG 0.586187 7_3:-83211175 Msa1130920:three_prime_UTR
AGAACTCAGAACCTCATCAC+TGG 0.587454 7_3:-83211904 Msa1130920:CDS
TCTTGCCTACAATAGCTGAA+GGG 0.592508 7_3:+83211720 None:intergenic
ACACTAATTTGACTCAACAA+TGG 0.595619 7_3:-83211186 Msa1130920:three_prime_UTR
AAGTTGAATGAATGAATGAA+TGG 0.596929 7_3:+83214985 None:intergenic
TTGTGTCTCTAAGCCCGTCA+TGG 0.597875 7_3:+83211666 None:intergenic
CCAAGTACAGGGTGAACTTG+GGG 0.598254 7_3:-83211282 Msa1130920:CDS
AACTTGAAGAACTCTTCAGG+TGG 0.599681 7_3:+83213654 None:intergenic
TTTAATAACATACTTATGAG+AGG 0.605973 7_3:+83214447 None:intergenic
AAGAGGGTGTTGGTCCCAGA+AGG 0.606032 7_3:-83215283 Msa1130920:five_prime_UTR
GAAATGGATGGTGGAAAAGG+AGG 0.608385 7_3:-83215259 Msa1130920:five_prime_UTR
GTAGGTTTAGGTGAGATGCC+AGG 0.609368 7_3:+83213135 None:intergenic
GGTGGAAAAGGAGGCACGTG+AGG 0.615126 7_3:-83215250 Msa1130920:five_prime_UTR
GTGAGGAAAGAGTGAGGACA+AGG 0.617187 7_3:-83215233 Msa1130920:five_prime_UTR
GCTTTGATCGCAAGTATAGG+TGG 0.619142 7_3:+83211871 None:intergenic
GAGGAGGCACGTGTGAAAGA+GGG 0.620599 7_3:-83215299 None:intergenic
CTGTTCCTAACACTTCATCA+CGG 0.623164 7_3:+83213364 None:intergenic
AGTAAGACCCTAAGCATCGT+GGG 0.624384 7_3:+83214841 None:intergenic
TCTGCACTTCTTCGCAACTG+CGG 0.624661 7_3:-83214784 Msa1130920:five_prime_UTR
GCACGTGTGAAAGAGGGTGT+TGG 0.626743 7_3:-83215293 None:intergenic
AAGTTTGACCAATACTGACC+AGG 0.628089 7_3:-83213636 Msa1130920:CDS
GGAATGAGCTTAGGAACTTG+TGG 0.628795 7_3:-83214264 Msa1130920:CDS
TATCAAATATGAAAGGGAGT+CGG 0.629440 7_3:-83213597 Msa1130920:CDS
GCATCATCCAACCAGTGATG+AGG 0.630119 7_3:+83211893 None:intergenic
GCATTCAATATATTTGTGCG+TGG 0.632838 7_3:+83214027 None:intergenic
CCAGAAGGTGAAATGGATGG+TGG 0.634655 7_3:-83215268 Msa1130920:five_prime_UTR
GGAATGGGAGGAAATACTTG+CGG 0.634886 7_3:+83211940 None:intergenic
GAAGAAGTGCAGAAATAATG+TGG 0.645080 7_3:+83214794 None:intergenic
TAATAGCATCGAAAGCTGCA+GGG 0.660310 7_3:-83213449 Msa1130920:CDS
ACTTGAAGAACTCTTCAGGT+GGG 0.661573 7_3:+83213655 None:intergenic
AGGCACGTGAGGAAAGAGTG+AGG 0.666650 7_3:-83215239 Msa1130920:five_prime_UTR
CTTCAAATGCATGCTCAATG+GGG 0.668890 7_3:-83214317 Msa1130920:CDS
GTCCCAGAAGGTGAAATGGA+TGG 0.674515 7_3:-83215271 Msa1130920:five_prime_UTR
GAGTATAACCACGAAACTGG+AGG 0.676593 7_3:-83213572 Msa1130920:intron
TGAGGACAAGGAATGAACGA+AGG 0.679514 7_3:-83215221 Msa1130920:five_prime_UTR
GAGTAAGACCCTAAGCATCG+TGG 0.680732 7_3:+83214840 None:intergenic
GCGGAGAGTCATAACGCCAG+TGG 0.687526 7_3:-83211782 Msa1130920:CDS
TGAATTCTTTCCAGCCACCG+GGG 0.688194 7_3:-83212086 Msa1130920:CDS
CAAACTGCCCTTTCACCCGG+GGG 0.705042 7_3:+83211309 None:intergenic
AAGACCCTAAGCATCGTGGG+AGG 0.718715 7_3:+83214844 None:intergenic
CGTGGATTATATATCCAGTG+AGG 0.724175 7_3:+83214680 None:intergenic
CTTGGGGTAGCTGAAACCAG+AGG 0.735170 7_3:-83211266 Msa1130920:CDS
GCTTATGTCTAATAACGACG+AGG 0.765345 7_3:-83210962 Msa1130920:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAGAAAAAAAAAGAAT+GGG - chr7_3:83213532-83213551 Msa1130920:intron 10.0%
!! TTAATTCTATCAAATATGAA+AGG - chr7_3:83212603-83212622 Msa1130920:intron 15.0%
!! TAATTCTATCAAATATGAAA+GGG - chr7_3:83212604-83212623 Msa1130920:intron 15.0%
!!! GATTTATATTTTATTGTCTT+TGG - chr7_3:83213414-83213433 Msa1130920:CDS 15.0%
!!! CTTTTTAGAAAAAAAAAGAA+TGG - chr7_3:83213531-83213550 Msa1130920:intron 15.0%
!!! TTTTAGAAAAAAAAAGAATG+GGG - chr7_3:83213533-83213552 Msa1130920:intron 15.0%
!!! ATTTTATTATTAACATCTCT+TGG + chr7_3:83213747-83213766 None:intergenic 15.0%
!! ATAAATACATATTATCTACT+AGG + chr7_3:83213777-83213796 None:intergenic 15.0%
!!! ATAAAAAAATATTTCTAGAG+TGG + chr7_3:83214686-83214705 None:intergenic 15.0%
!! TAACAAATAAGATTTATAAG+AGG + chr7_3:83215205-83215224 None:intergenic 15.0%
!!! TCTTATAAATCTTATTTGTT+AGG - chr7_3:83215204-83215223 Msa1130920:five_prime_UTR 15.0%
!!! CTTATAAATCTTATTTGTTA+GGG - chr7_3:83215205-83215224 Msa1130920:five_prime_UTR 15.0%
!!! AAACTAAATATCTCTTTTTG+TGG + chr7_3:83211051-83211070 None:intergenic 20.0%
!! TTCTTTCTTTCTCAAATTAA+TGG + chr7_3:83211314-83211333 None:intergenic 20.0%
!!! TTAATTTGAGAAAGAAAGAA+TGG - chr7_3:83211314-83211333 Msa1130920:CDS 20.0%
!! TAATTTGAGAAAGAAAGAAT+GGG - chr7_3:83211315-83211334 Msa1130920:CDS 20.0%
!! TTTAATAACATACTTATGAG+AGG + chr7_3:83211763-83211782 None:intergenic 20.0%
!!! TAAATAAATACAAGTTGGAT+TGG + chr7_3:83212056-83212075 None:intergenic 20.0%
!! TGGTATAAATAAATACAAGT+TGG + chr7_3:83212061-83212080 None:intergenic 20.0%
!! ACATATCTAACAAATAACAA+CGG + chr7_3:83212280-83212299 None:intergenic 20.0%
!! AGAACATTAATAATGAAATC+CGG + chr7_3:83212349-83212368 None:intergenic 20.0%
!! GTCAATAACTAACAAAATAA+GGG + chr7_3:83212704-83212723 None:intergenic 20.0%
!! TGTCAATAACTAACAAAATA+AGG + chr7_3:83212705-83212724 None:intergenic 20.0%
!! TGAATCTTTGTATTATTATG+AGG + chr7_3:83212886-83212905 None:intergenic 20.0%
!!! TTTGAGTTGATTTATCAATA+TGG - chr7_3:83214718-83214737 Msa1130920:five_prime_UTR 20.0%
!!! ATTGCTCAAATTTATTTTAC+AGG - chr7_3:83214838-83214857 Msa1130920:five_prime_UTR 20.0%
!! AATTACAATCCTAAATTTGT+AGG + chr7_3:83215143-83215162 None:intergenic 20.0%
!! TTATTATATGTAGTAGTGAT+TGG - chr7_3:83215161-83215180 Msa1130920:five_prime_UTR 20.0%
!!! AAAGAGATATTTAGTTTTCG+TGG - chr7_3:83211054-83211073 Msa1130920:three_prime_UTR 25.0%
! TGAATGAAAAAACAATTGAG+TGG + chr7_3:83211171-83211190 None:intergenic 25.0%
! AAGTTGAATGAATGAATGAA+TGG + chr7_3:83211225-83211244 None:intergenic 25.0%
! AACATTACTATTCTTTAACG+TGG + chr7_3:83211548-83211567 None:intergenic 25.0%
!!! AATGTTGTTATATTTTGAGG+AGG + chr7_3:83212086-83212105 None:intergenic 25.0%
!! GGAAATGTTGTTATATTTTG+AGG + chr7_3:83212089-83212108 None:intergenic 25.0%
! TTACACTTTCAATCAATGTT+TGG - chr7_3:83212371-83212390 Msa1130920:intron 25.0%
! GCAGTTTGTATGTTAAAAAA+AGG + chr7_3:83212446-83212465 None:intergenic 25.0%
! TAAATACATGGAAAATATGC+AGG - chr7_3:83212523-83212542 Msa1130920:intron 25.0%
! TTGTGTATCAAAATCAAACT+TGG + chr7_3:83213025-83213044 None:intergenic 25.0%
! ACCAAAATAACAGTTATCTT+TGG - chr7_3:83213259-83213278 Msa1130920:CDS 25.0%
!!! ACCAAAGATAACTGTTATTT+TGG + chr7_3:83213263-83213282 None:intergenic 25.0%
! TTCATATGATATCACGAATT+AGG + chr7_3:83213372-83213391 None:intergenic 25.0%
! TTTGTATATCTGTCTCTAAT+CGG - chr7_3:83213797-83213816 Msa1130920:intron 25.0%
! ATGTTCCATAGACTTATTAT+CGG + chr7_3:83214153-83214172 None:intergenic 25.0%
! CATTATTCATAGAACTTTCA+AGG + chr7_3:83214517-83214536 None:intergenic 25.0%
!!! ATCAGTGTTTTTAGTAAGTT+TGG - chr7_3:83214742-83214761 Msa1130920:five_prime_UTR 25.0%
! AGACTGTAAATCAATAATGA+AGG + chr7_3:83214994-83215013 None:intergenic 25.0%
ATGAAAAAACAATTGAGTGG+AGG + chr7_3:83211168-83211187 None:intergenic 30.0%
!! GAATGTTTTTGCAATTGTGA+TGG + chr7_3:83211741-83211760 None:intergenic 30.0%
ATGAGGAATTGAGGATATAT+AGG + chr7_3:83211821-83211840 None:intergenic 30.0%
! AAATACAAGTTGGATTGGAT+TGG + chr7_3:83212051-83212070 None:intergenic 30.0%
ACATCATCAAGTTTATTCTG+TGG + chr7_3:83212110-83212129 None:intergenic 30.0%
ATGCACTCAAAAAATTAGTG+AGG - chr7_3:83212199-83212218 Msa1130920:CDS 30.0%
GTGTTTGAGTGAAATTTAGA+TGG + chr7_3:83212250-83212269 None:intergenic 30.0%
ATTAATAATGAAATCCGGTC+AGG + chr7_3:83212344-83212363 None:intergenic 30.0%
TTACTATCAGCTTCAGAAAA+TGG + chr7_3:83212506-83212525 None:intergenic 30.0%
TGAAGCTGATAGTAAATACA+TGG - chr7_3:83212511-83212530 Msa1130920:intron 30.0%
TATCAAATATGAAAGGGAGT+CGG - chr7_3:83212610-83212629 Msa1130920:intron 30.0%
ATTTCAACAGGTTTAATGCT+TGG - chr7_3:83212790-83212809 Msa1130920:intron 30.0%
CTTTGTATTATTATGAGGAC+TGG + chr7_3:83212881-83212900 None:intergenic 30.0%
TGTATCAAAATCAAACTTGG+CGG + chr7_3:83213022-83213041 None:intergenic 30.0%
ATATGATATCACGAATTAGG+TGG + chr7_3:83213369-83213388 None:intergenic 30.0%
TTGAGAGACAGAAGATATAT+TGG - chr7_3:83213471-83213490 Msa1130920:intron 30.0%
AGAAAAAAAAAGAATGGGGA+AGG - chr7_3:83213537-83213556 Msa1130920:intron 30.0%
GAAAAAAAAAGAATGGGGAA+GGG - chr7_3:83213538-83213557 Msa1130920:intron 30.0%
AAAAAAAAAGAATGGGGAAG+GGG - chr7_3:83213539-83213558 Msa1130920:intron 30.0%
TTGTATATCTGTCTCTAATC+GGG - chr7_3:83213798-83213817 Msa1130920:intron 30.0%
AAAATTCCCATTTGCAGTTA+TGG - chr7_3:83213927-83213946 Msa1130920:intron 30.0%
GAACTCTTTGTTGGAAATAA+AGG + chr7_3:83213972-83213991 None:intergenic 30.0%
AATACTACTCATCAGTATGA+TGG - chr7_3:83214023-83214042 Msa1130920:CDS 30.0%
TGATGGAAAAAAACAAAAGC+AGG - chr7_3:83214040-83214059 Msa1130920:CDS 30.0%
AATATCACATATCTGGTGAT+TGG - chr7_3:83214065-83214084 Msa1130920:CDS 30.0%
!!! TCTTTTTGGAACACTGATTT+TGG + chr7_3:83214233-83214252 None:intergenic 30.0%
ATGAATAATGATCACCATGA+CGG - chr7_3:83214527-83214546 Msa1130920:five_prime_UTR 30.0%
TAGTAATCTCAAACATGTCT+AGG - chr7_3:83214785-83214804 Msa1130920:five_prime_UTR 30.0%
ACACTAATTTGACTCAACAA+TGG - chr7_3:83215021-83215040 Msa1130920:five_prime_UTR 30.0%
AAAACAATTGAGTGGAGGAA+GGG + chr7_3:83211163-83211182 None:intergenic 35.0%
AAAAACAATTGAGTGGAGGA+AGG + chr7_3:83211164-83211183 None:intergenic 35.0%
! GAAGAAGTGCAGAAATAATG+TGG + chr7_3:83211416-83211435 None:intergenic 35.0%
GTTGAAAACCAGAGATTGAT+GGG + chr7_3:83211696-83211715 None:intergenic 35.0%
AGTTGAAAACCAGAGATTGA+TGG + chr7_3:83211697-83211716 None:intergenic 35.0%
ACTACTTACCCAAATCATGA+TGG - chr7_3:83211714-83211733 Msa1130920:CDS 35.0%
! ACATGAAGAAGAAGAAGTAC+AGG + chr7_3:83211792-83211811 None:intergenic 35.0%
TTCTCAAGATTCAGTTAGCA+CGG - chr7_3:83211866-83211885 Msa1130920:CDS 35.0%
TCTTCAAATGCATGCTCAAT+GGG - chr7_3:83211889-83211908 Msa1130920:CDS 35.0%
!! TGTTATATTTTGAGGAGGCA+TGG + chr7_3:83212081-83212100 None:intergenic 35.0%
GCATTCAATATATTTGTGCG+TGG + chr7_3:83212183-83212202 None:intergenic 35.0%
! ACAGTTAACTTTTACCTGAC+CGG - chr7_3:83212327-83212346 Msa1130920:intron 35.0%
! AAATGGTGATGTAGAAGTGA+AGG + chr7_3:83212489-83212508 None:intergenic 35.0%
TCAAACTTGAAGAACTCTTC+AGG + chr7_3:83212559-83212578 None:intergenic 35.0%
!! TAGAATTAACTTGCTTCACC+TGG + chr7_3:83212592-83212611 None:intergenic 35.0%
CAATTTGCATGATTGCTCTT+TGG + chr7_3:83212979-83212998 None:intergenic 35.0%
GCAAATTGTAGTTTCAGTGA+TGG - chr7_3:83212991-83213010 Msa1130920:intron 35.0%
TCTTTACAAAGAGATTCTCC+TGG - chr7_3:83213054-83213073 Msa1130920:intron 35.0%
CAATATTTGCCTTTCTTCAG+TGG + chr7_3:83213097-83213116 None:intergenic 35.0%
TGTAACAGCATAAACAAGAC+CGG + chr7_3:83213324-83213343 None:intergenic 35.0%
CTAAAACAACACAGAGAACA+TGG - chr7_3:83213392-83213411 Msa1130920:CDS 35.0%
! TGACAAATTTTACCACCAGT+TGG + chr7_3:83213445-83213464 None:intergenic 35.0%
AGCATTCACATACTTCCAAA+AGG + chr7_3:83213675-83213694 None:intergenic 35.0%
GATTCATGAGAACTCTTTGT+TGG + chr7_3:83213981-83214000 None:intergenic 35.0%
GCAGGAAAATATCACATATC+TGG - chr7_3:83214058-83214077 Msa1130920:CDS 35.0%
CATAGACTTATTATCGGAAG+TGG + chr7_3:83214147-83214166 None:intergenic 35.0%
CACTTCCGATAATAAGTCTA+TGG - chr7_3:83214145-83214164 Msa1130920:intron 35.0%
! GAAATGGAGAACTCTCTTTT+TGG + chr7_3:83214247-83214266 None:intergenic 35.0%
!!! CTGACTTTTAGGATTGGAAT+GGG + chr7_3:83214285-83214304 None:intergenic 35.0%
!!! TCTGACTTTTAGGATTGGAA+TGG + chr7_3:83214286-83214305 None:intergenic 35.0%
!!! TGAGTTCTGACTTTTAGGAT+TGG + chr7_3:83214291-83214310 None:intergenic 35.0%
ATTGCTTTGATCGCAAGTAT+AGG + chr7_3:83214342-83214361 None:intergenic 35.0%
GTACAACTTTGACCATTAGA+TGG + chr7_3:83214389-83214408 None:intergenic 35.0%
!!! TACTAGTTTTTACCATGACG+CGG - chr7_3:83214406-83214425 Msa1130920:intron 35.0%
TGAATAATGATCACCATGAC+GGG - chr7_3:83214528-83214547 Msa1130920:five_prime_UTR 35.0%
AGACAGATGCTATGACAAAA+AGG - chr7_3:83214622-83214641 Msa1130920:five_prime_UTR 35.0%
TCTCAGAAATAGTGATAGCA+TGG + chr7_3:83214659-83214678 None:intergenic 35.0%
AAAATAATCTCAGTAGCCTC+TGG + chr7_3:83214960-83214979 None:intergenic 35.0%
ACTCAACAATGGTTAACTGT+AGG - chr7_3:83215032-83215051 Msa1130920:five_prime_UTR 35.0%
!!! GCATTTTTAGTGCTTTCTGT+CGG - chr7_3:83215082-83215101 Msa1130920:five_prime_UTR 35.0%
TGACTGTCTCCTACAAATTT+AGG - chr7_3:83215131-83215150 Msa1130920:five_prime_UTR 35.0%
! AATCTTATTTGTTAGGGCTG+TGG - chr7_3:83215211-83215230 Msa1130920:five_prime_UTR 35.0%
!!! TTTAGTTTTCGTGGCTGTGA+TGG - chr7_3:83211063-83211082 Msa1130920:three_prime_UTR 40.0%
!! TTAGTTTTCGTGGCTGTGAT+GGG - chr7_3:83211064-83211083 Msa1130920:three_prime_UTR 40.0%
CTTACTTAAGACTCCAGCTT+TGG - chr7_3:83211255-83211274 Msa1130920:exon 40.0%
! TTGGTTCTCTTCTGTTGATG+CGG - chr7_3:83211274-83211293 Msa1130920:CDS 40.0%
! CGTGGATTATATATCCAGTG+AGG + chr7_3:83211530-83211549 None:intergenic 40.0%
GTGATGGTCCATCATGATTT+GGG + chr7_3:83211725-83211744 None:intergenic 40.0%
TGTGATGGTCCATCATGATT+TGG + chr7_3:83211726-83211745 None:intergenic 40.0%
! ATGATGGTGATGAGGAATTG+AGG + chr7_3:83211830-83211849 None:intergenic 40.0%
! TGCAATACATGATGGTGATG+AGG + chr7_3:83211838-83211857 None:intergenic 40.0%
GACATCACTGCAATACATGA+TGG + chr7_3:83211846-83211865 None:intergenic 40.0%
GTCTTCAAATGCATGCTCAA+TGG - chr7_3:83211888-83211907 Msa1130920:CDS 40.0%
CTTCAAATGCATGCTCAATG+GGG - chr7_3:83211890-83211909 Msa1130920:CDS 40.0%
TTCTCATTAAACCAGTTCGC+AGG - chr7_3:83211922-83211941 Msa1130920:CDS 40.0%
!! CACAGAAGCACTAGAATGAT+TGG + chr7_3:83212156-83212175 None:intergenic 40.0%
CAATCATTCTAGTGCTTCTG+TGG - chr7_3:83212154-83212173 Msa1130920:CDS 40.0%
GAAATTTAGATGGCGTGCAT+AGG + chr7_3:83212240-83212259 None:intergenic 40.0%
GAAATTTCCCTCAAGTTTGC+AGG + chr7_3:83212424-83212443 None:intergenic 40.0%
! AGAAGTGAAGGTACAAGAGT+TGG + chr7_3:83212477-83212496 None:intergenic 40.0%
ACTTGAAGAACTCTTCAGGT+GGG + chr7_3:83212555-83212574 None:intergenic 40.0%
AACTTGAAGAACTCTTCAGG+TGG + chr7_3:83212556-83212575 None:intergenic 40.0%
AAGTTTGACCAATACTGACC+AGG - chr7_3:83212571-83212590 Msa1130920:intron 40.0%
GTTATATACCTCCAGTTTCG+TGG + chr7_3:83212646-83212665 None:intergenic 40.0%
! ATAATAGCATCGAAAGCTGC+AGG - chr7_3:83212757-83212776 Msa1130920:intron 40.0%
! TAATAGCATCGAAAGCTGCA+GGG - chr7_3:83212758-83212777 Msa1130920:intron 40.0%
GGGTGTGACAAAATTTCAAC+AGG - chr7_3:83212778-83212797 Msa1130920:intron 40.0%
! GAAAACCGTGATGAAGTGTT+AGG - chr7_3:83212838-83212857 Msa1130920:intron 40.0%
CTGTTCCTAACACTTCATCA+CGG + chr7_3:83212846-83212865 None:intergenic 40.0%
CTTTCTTCAGTGGTAGGTTT+AGG + chr7_3:83213087-83213106 None:intergenic 40.0%
CTAAACCTACCACTGAAGAA+AGG - chr7_3:83213085-83213104 Msa1130920:CDS 40.0%
ATTTGCCTTTCTTCAGTGGT+AGG + chr7_3:83213093-83213112 None:intergenic 40.0%
! CATGATTTTTACCCCTTTCC+CGG - chr7_3:83213302-83213321 Msa1130920:CDS 40.0%
GTAACAGCATAAACAAGACC+GGG + chr7_3:83213323-83213342 None:intergenic 40.0%
ACAGAGTTTGAATCTCACCA+GGG + chr7_3:83213610-83213629 None:intergenic 40.0%
!!! GTTGAGAGCTCTTGTTTTGT+TGG - chr7_3:83213830-83213849 Msa1130920:intron 40.0%
!!! ACTGATTTTGGTGTCCAACT+AGG + chr7_3:83214221-83214240 None:intergenic 40.0%
!!! ACTTTTAGGATTGGAATGGG+AGG + chr7_3:83214282-83214301 None:intergenic 40.0%
!!! GGTTCTGAGTTCTGACTTTT+AGG + chr7_3:83214296-83214315 None:intergenic 40.0%
ATGCATGACTCTCCATCTAA+TGG - chr7_3:83214374-83214393 Msa1130920:intron 40.0%
TCTTGCCTACAATAGCTGAA+GGG + chr7_3:83214490-83214509 None:intergenic 40.0%
TTCTTGCCTACAATAGCTGA+AGG + chr7_3:83214491-83214510 None:intergenic 40.0%
TTGTTAGAGCTGCTTCTCTT+TGG + chr7_3:83214583-83214602 None:intergenic 40.0%
CAGAAATAGTGATAGCATGG+TGG + chr7_3:83214656-83214675 None:intergenic 40.0%
! GTCTTTTCCGGCTTTCATAT+CGG + chr7_3:83214865-83214884 None:intergenic 40.0%
ATATGAAAGCCGGAAAAGAC+AGG - chr7_3:83214865-83214884 Msa1130920:five_prime_UTR 40.0%
GCTTATGTCTAATAACGACG+AGG - chr7_3:83215245-83215264 Msa1130920:five_prime_UTR 40.0%
CAATTCTTCCAGCTAAAAGC+AGG + chr7_3:83215278-83215297 None:intergenic 40.0%
CACCATCCATTTCACCTTCT+GGG + chr7_3:83210941-83210960 None:intergenic 45.0%
!! GGTGAAATGGATGGTGGAAA+AGG - chr7_3:83210945-83210964 Msa1130920:three_prime_UTR 45.0%
!! GAAATGGATGGTGGAAAAGG+AGG - chr7_3:83210948-83210967 Msa1130920:three_prime_UTR 45.0%
TGAGGACAAGGAATGAACGA+AGG - chr7_3:83210986-83211005 Msa1130920:three_prime_UTR 45.0%
CAAGGAATGAACGAAGGAAG+CGG - chr7_3:83210992-83211011 Msa1130920:three_prime_UTR 45.0%
CAACAGAAGAGAACCAAAGC+TGG + chr7_3:83211271-83211290 None:intergenic 45.0%
! AGTAAGACCCTAAGCATCGT+GGG + chr7_3:83211369-83211388 None:intergenic 45.0%
ATGTGGCGAGTAGAATCATC+AGG + chr7_3:83211399-83211418 None:intergenic 45.0%
TCTACAATATCGCTCCTCAC+TGG - chr7_3:83211513-83211532 Msa1130920:intron 45.0%
!! AGCAGTTCGTGATGGGTTAA+AGG - chr7_3:83211603-83211622 Msa1130920:CDS 45.0%
!! TTCGTGATGGGTTAAAGGCA+TGG - chr7_3:83211608-83211627 Msa1130920:CDS 45.0%
!! TCGTGATGGGTTAAAGGCAT+GGG - chr7_3:83211609-83211628 Msa1130920:CDS 45.0%
AACCAGAGATTGATGGGAGT+GGG + chr7_3:83211690-83211709 None:intergenic 45.0%
AAACCAGAGATTGATGGGAG+TGG + chr7_3:83211691-83211710 None:intergenic 45.0%
GGAATGAGCTTAGGAACTTG+TGG - chr7_3:83211943-83211962 Msa1130920:CDS 45.0%
TTGCTTCACCTGGTCAGTAT+TGG + chr7_3:83212582-83212601 None:intergenic 45.0%
GCTGAGTATAACCACGAAAC+TGG - chr7_3:83212632-83212651 Msa1130920:intron 45.0%
GAGTATAACCACGAAACTGG+AGG - chr7_3:83212635-83212654 Msa1130920:intron 45.0%
GATCTAGAAGACCATTCTGC+TGG - chr7_3:83212919-83212938 Msa1130920:intron 45.0%
AGTCAATAGCTCCAGCAGAA+TGG + chr7_3:83212933-83212952 None:intergenic 45.0%
!! TGCTGGAGCTATTGACTTGA+TGG - chr7_3:83212936-83212955 Msa1130920:intron 45.0%
! CCAAGAAAACGCAGAAGCAT+TGG + chr7_3:83213127-83213146 None:intergenic 45.0%
! CCAATGCTTCTGCGTTTTCT+TGG - chr7_3:83213124-83213143 Msa1130920:CDS 45.0%
CATAAACAAGACCGGGAAAG+GGG + chr7_3:83213316-83213335 None:intergenic 45.0%
GCATAAACAAGACCGGGAAA+GGG + chr7_3:83213317-83213336 None:intergenic 45.0%
AGCATAAACAAGACCGGGAA+AGG + chr7_3:83213318-83213337 None:intergenic 45.0%
!! TTGTCTTTGGAAGCACCAAC+TGG - chr7_3:83213427-83213446 Msa1130920:CDS 45.0%
GACCATATTACAACTGTCCC+TGG - chr7_3:83213590-83213609 Msa1130920:CDS 45.0%
CACCAGGGACAGTTGTAATA+TGG + chr7_3:83213595-83213614 None:intergenic 45.0%
GACAGAGTTTGAATCTCACC+AGG + chr7_3:83213611-83213630 None:intergenic 45.0%
GAGATTCAAACTCTGTCTCG+AGG - chr7_3:83213614-83213633 Msa1130920:CDS 45.0%
ACTCTGTCTCGAGGTTATAC+AGG - chr7_3:83213623-83213642 Msa1130920:CDS 45.0%
CTGCTGCCATAACTGCAAAT+GGG + chr7_3:83213936-83213955 None:intergenic 45.0%
ACTGCTGCCATAACTGCAAA+TGG + chr7_3:83213937-83213956 None:intergenic 45.0%
TTGCAGTTATGGCAGCAGTA+TGG - chr7_3:83213938-83213957 Msa1130920:intron 45.0%
! TATCTGGTGATTGGTCAGTC+TGG - chr7_3:83214074-83214093 Msa1130920:CDS 45.0%
CTTGAATTCTTTCCAGCCAC+CGG - chr7_3:83214119-83214138 Msa1130920:intron 45.0%
TTGAATTCTTTCCAGCCACC+GGG - chr7_3:83214120-83214139 Msa1130920:intron 45.0%
TCGATGTTCAACGCACAATC+AGG - chr7_3:83214188-83214207 Msa1130920:intron 45.0%
AATCAGGCATGCATCCTAGT+TGG - chr7_3:83214204-83214223 Msa1130920:intron 45.0%
GAGGAAATACTTGCGGGAAA+TGG + chr7_3:83214263-83214282 None:intergenic 45.0%
GAATGGGAGGAAATACTTGC+GGG + chr7_3:83214269-83214288 None:intergenic 45.0%
GGAATGGGAGGAAATACTTG+CGG + chr7_3:83214270-83214289 None:intergenic 45.0%
AGAACTCAGAACCTCATCAC+TGG - chr7_3:83214303-83214322 Msa1130920:CDS 45.0%
GCTTTGATCGCAAGTATAGG+TGG + chr7_3:83214339-83214358 None:intergenic 45.0%
AATGCCCCTTCAGCTATTGT+AGG - chr7_3:83214482-83214501 Msa1130920:exon 45.0%
CTTGCCTACAATAGCTGAAG+GGG + chr7_3:83214489-83214508 None:intergenic 45.0%
GTTTGGAAACTTCTACAGCG+TGG - chr7_3:83214759-83214778 Msa1130920:five_prime_UTR 45.0%
TACAGGTCCGATATGAAAGC+CGG - chr7_3:83214855-83214874 Msa1130920:five_prime_UTR 45.0%
! CAGTTTGTTCGCCAAGTACA+GGG - chr7_3:83214914-83214933 Msa1130920:five_prime_UTR 45.0%
TCCAGCTAAAAGCAGGATCT+TGG + chr7_3:83215271-83215290 None:intergenic 45.0%
!!! TAGAAATATTTTTTTATTAT+AGG - chr7_3:83214689-83214708 Msa1130920:five_prime_UTR 5.0%
!!! AGAAATATTTTTTTATTATA+GGG - chr7_3:83214690-83214709 Msa1130920:five_prime_UTR 5.0%
GTTGGTCCCAGAAGGTGAAA+TGG - chr7_3:83210932-83210951 Msa1130920:three_prime_UTR 50.0%
GTCCCAGAAGGTGAAATGGA+TGG - chr7_3:83210936-83210955 Msa1130920:three_prime_UTR 50.0%
CCACCATCCATTTCACCTTC+TGG + chr7_3:83210942-83210961 None:intergenic 50.0%
CCAGAAGGTGAAATGGATGG+TGG - chr7_3:83210939-83210958 Msa1130920:three_prime_UTR 50.0%
GTGAGGAAAGAGTGAGGACA+AGG - chr7_3:83210974-83210993 Msa1130920:three_prime_UTR 50.0%
TTGTTCCTCCCACGATGCTT+AGG - chr7_3:83211358-83211377 Msa1130920:intron 50.0%
TGTTCCTCCCACGATGCTTA+GGG - chr7_3:83211359-83211378 Msa1130920:intron 50.0%
! GAGTAAGACCCTAAGCATCG+TGG + chr7_3:83211370-83211389 None:intergenic 50.0%
TCTGCACTTCTTCGCAACTG+CGG - chr7_3:83211423-83211442 Msa1130920:intron 50.0%
CAGTTGCAGCAGTTCGTGAT+GGG - chr7_3:83211596-83211615 Msa1130920:CDS 50.0%
CTAAGCTCATTCCTGCGAAC+TGG + chr7_3:83211936-83211955 None:intergenic 50.0%
CAGTTCGCAGGAATGAGCTT+AGG - chr7_3:83211934-83211953 Msa1130920:CDS 50.0%
CCACTCTCCTGCAAACTTGA+GGG - chr7_3:83212414-83212433 Msa1130920:intron 50.0%
GTAGGTTTAGGTGAGATGCC+AGG + chr7_3:83213075-83213094 None:intergenic 50.0%
!! TCTTTGGAAGCACCAACTGG+TGG - chr7_3:83213430-83213449 Msa1130920:CDS 50.0%
!! CAAAAGGTGTCGCAGCTCAA+TGG + chr7_3:83213659-83213678 None:intergenic 50.0%
! CATTGAGCTGCGACACCTTT+TGG - chr7_3:83213657-83213676 Msa1130920:CDS 50.0%
TGAATTCTTTCCAGCCACCG+GGG - chr7_3:83214121-83214140 Msa1130920:intron 50.0%
CTTATTATCGGAAGTGGCCC+CGG + chr7_3:83214141-83214160 None:intergenic 50.0%
CTCAGAACCTCATCACTGGT+TGG - chr7_3:83214307-83214326 Msa1130920:CDS 50.0%
GCATCATCCAACCAGTGATG+AGG + chr7_3:83214317-83214336 None:intergenic 50.0%
AGTCATAACGCCAGTGGTGT+GGG - chr7_3:83214431-83214450 Msa1130920:intron 50.0%
TTCCATCACTTACGCTGCCT+AGG + chr7_3:83214463-83214482 None:intergenic 50.0%
TTGTGTCTCTAAGCCCGTCA+TGG + chr7_3:83214544-83214563 None:intergenic 50.0%
TAGAGCTGCTTCTCTTTGGC+TGG + chr7_3:83214579-83214598 None:intergenic 50.0%
! GGTTCTCTGCCTGTCTTTTC+CGG + chr7_3:83214877-83214896 None:intergenic 50.0%
AACAAACTGCCCTTTCACCC+GGG + chr7_3:83214903-83214922 None:intergenic 50.0%
GAACAAACTGCCCTTTCACC+CGG + chr7_3:83214904-83214923 None:intergenic 50.0%
! GCAGTTTGTTCGCCAAGTAC+AGG - chr7_3:83214913-83214932 Msa1130920:five_prime_UTR 50.0%
GCCAAGTACAGGGTGAACTT+GGG - chr7_3:83214924-83214943 Msa1130920:five_prime_UTR 50.0%
CCAAGTACAGGGTGAACTTG+GGG - chr7_3:83214925-83214944 Msa1130920:five_prime_UTR 50.0%
!! GCCAAGATCCTGCTTTTAGC+TGG - chr7_3:83215267-83215286 Msa1130920:five_prime_UTR 50.0%
!! AAGAGGGTGTTGGTCCCAGA+AGG - chr7_3:83210924-83210943 Msa1130920:three_prime_UTR 55.0%
AGGCACGTGAGGAAAGAGTG+AGG - chr7_3:83210968-83210987 Msa1130920:three_prime_UTR 55.0%
!! GTTTTCGTGGCTGTGATGGG+AGG - chr7_3:83211067-83211086 Msa1130920:three_prime_UTR 55.0%
! AAGACCCTAAGCATCGTGGG+AGG + chr7_3:83211366-83211385 None:intergenic 55.0%
CTTCGCAACTGCGGCTACAA+AGG - chr7_3:83211432-83211451 Msa1130920:intron 55.0%
GCAGTTGCAGCAGTTCGTGA+TGG - chr7_3:83211595-83211614 Msa1130920:CDS 55.0%
CTCCCACTCCCATCAATCTC+TGG - chr7_3:83211685-83211704 Msa1130920:CDS 55.0%
GGAACTTGTGGCAGCATGTC+TGG - chr7_3:83211955-83211974 Msa1130920:CDS 55.0%
GCCACTCTCCTGCAAACTTG+AGG - chr7_3:83212413-83212432 Msa1130920:intron 55.0%
CCCTCAAGTTTGCAGGAGAG+TGG + chr7_3:83212417-83212436 None:intergenic 55.0%
CGTTATGACTCTCCGCGTCA+TGG + chr7_3:83214421-83214440 None:intergenic 55.0%
GAGTCATAACGCCAGTGGTG+TGG - chr7_3:83214430-83214449 Msa1130920:intron 55.0%
ACAAACTGCCCTTTCACCCG+GGG + chr7_3:83214902-83214921 None:intergenic 55.0%
CGCCAAGTACAGGGTGAACT+TGG - chr7_3:83214923-83214942 Msa1130920:five_prime_UTR 55.0%
CCCCAAGTTCACCCTGTACT+TGG + chr7_3:83214928-83214947 None:intergenic 55.0%
CTTGGGGTAGCTGAAACCAG+AGG - chr7_3:83214941-83214960 Msa1130920:five_prime_UTR 55.0%
! GGTGGAAAAGGAGGCACGTG+AGG - chr7_3:83210957-83210976 Msa1130920:three_prime_UTR 60.0%
ATTATCGGAAGTGGCCCCGG+TGG + chr7_3:83214138-83214157 None:intergenic 60.0%
GCGGAGAGTCATAACGCCAG+TGG - chr7_3:83214425-83214444 Msa1130920:intron 60.0%
AACGCCAGTGGTGTGGGTGA+AGG - chr7_3:83214437-83214456 Msa1130920:intron 60.0%
TAGGCCTTCACCCACACCAC+TGG + chr7_3:83214444-83214463 None:intergenic 60.0%
AGTGGTGTGGGTGAAGGCCT+AGG - chr7_3:83214443-83214462 Msa1130920:intron 60.0%
GGCCTAGGCAGCGTAAGTGA+TGG - chr7_3:83214458-83214477 Msa1130920:intron 60.0%
CAAACTGCCCTTTCACCCGG+GGG + chr7_3:83214901-83214920 None:intergenic 60.0%
AGAACCGCCCCCGGGTGAAA+GGG - chr7_3:83214891-83214910 Msa1130920:five_prime_UTR 65.0%
GACAGGCAGAGAACCGCCCC+CGG - chr7_3:83214882-83214901 Msa1130920:five_prime_UTR 70.0%
ACAGGCAGAGAACCGCCCCC+GGG - chr7_3:83214883-83214902 Msa1130920:five_prime_UTR 70.0%
GAGAACCGCCCCCGGGTGAA+AGG - chr7_3:83214890-83214909 Msa1130920:five_prime_UTR 70.0%
ACTGCCCTTTCACCCGGGGG+CGG + chr7_3:83214898-83214917 None:intergenic 70.0%
TCGGAAGTGGCCCCGGTGGC+TGG + chr7_3:83214134-83214153 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 83210922 83215307 83210922 ID=Msa1130920;Name=Msa1130920
chr7_3 mRNA 83210922 83215307 83210922 ID=Msa1130920-mRNA-1;Parent=Msa1130920;Name=Msa1130920-mRNA-1;_AED=0.07;_eAED=0.07;_QI=808|0.83|0.85|1|1|1|7|337|545
chr7_3 exon 83210922 83211369 83210922 ID=Msa1130920-mRNA-1:exon:24728;Parent=Msa1130920-mRNA-1
chr7_3 exon 83211586 83212285 83211586 ID=Msa1130920-mRNA-1:exon:24727;Parent=Msa1130920-mRNA-1
chr7_3 exon 83213084 83213483 83213084 ID=Msa1130920-mRNA-1:exon:24726;Parent=Msa1130920-mRNA-1
chr7_3 exon 83213573 83213684 83213573 ID=Msa1130920-mRNA-1:exon:24725;Parent=Msa1130920-mRNA-1
chr7_3 exon 83214003 83214116 83214003 ID=Msa1130920-mRNA-1:exon:24724;Parent=Msa1130920-mRNA-1
chr7_3 exon 83214210 83214370 83214210 ID=Msa1130920-mRNA-1:exon:24723;Parent=Msa1130920-mRNA-1
chr7_3 exon 83214460 83215307 83214460 ID=Msa1130920-mRNA-1:exon:24722;Parent=Msa1130920-mRNA-1
chr7_3 five_prime_UTR 83214500 83215307 83214500 ID=Msa1130920-mRNA-1:five_prime_utr;Parent=Msa1130920-mRNA-1
chr7_3 CDS 83214460 83214499 83214460 ID=Msa1130920-mRNA-1:cds;Parent=Msa1130920-mRNA-1
chr7_3 CDS 83214210 83214370 83214210 ID=Msa1130920-mRNA-1:cds;Parent=Msa1130920-mRNA-1
chr7_3 CDS 83214003 83214116 83214003 ID=Msa1130920-mRNA-1:cds;Parent=Msa1130920-mRNA-1
chr7_3 CDS 83213573 83213684 83213573 ID=Msa1130920-mRNA-1:cds;Parent=Msa1130920-mRNA-1
chr7_3 CDS 83213084 83213483 83213084 ID=Msa1130920-mRNA-1:cds;Parent=Msa1130920-mRNA-1
chr7_3 CDS 83211586 83212285 83211586 ID=Msa1130920-mRNA-1:cds;Parent=Msa1130920-mRNA-1
chr7_3 CDS 83211259 83211369 83211259 ID=Msa1130920-mRNA-1:cds;Parent=Msa1130920-mRNA-1
chr7_3 three_prime_UTR 83210922 83211258 83210922 ID=Msa1130920-mRNA-1:three_prime_utr;Parent=Msa1130920-mRNA-1
Gene Sequence

>Msa1130920

ATGATGGACCATCACAATTGCAAAAACATTCCTCTCATAATGATGTCTTCTCAAGATTCAGTTAGCACGGTCTTCAAATGCATGCTCAATGGGGCTGTCGATTTTCTCATTAAACCAGTTCGCAGGAATGAGCTTAGGAACTTGTGGCAGCATGTCTGGAGAAGAAGAAATACTACTACTACTACTACTACTACTACTACTAATAAACTTGATGATGTTGCTGCAGAAAACAATGCTGCAACCAATCATTCTAGTGCTTCTGTGGCTTCCACGCACAAATATATTGAATGCACTCAAAAAATTAGTGAGGCTCATGATATGTCCCACCTGAAGAGTTCTTCAAGTTTGACCAATACTGACCAGGTGAAGCAAGTTAATTCTATCAAATATGAAAGGGAGTCGGCTGAGTATAACCACGAAACTGGAGAGAAATCAACTATAATAGCATCGAAAGCTGCAGGGTGTGACAAAATTTCAACAGGTTTAATGCTTGGTCAAAACTATGATTATAGTGAAACAGAAAACCGTGATGAAGTGTTAGGAACAGAGTTAAGCAAAGCCAGTCCTCATAATAATACAAAGATTCATCAAAGCAATAATGATCTAGAAGACCATTCTGCTGGAGCTATTGACTTGATGGCTACTTTTGATAAACTTCCAAAGAGCAATCATGCAAATTGTAGTTTCAGTGATGGTAATACCGCCAAGTTTGATTTTGATACACAATTTGAACTTTCTTTACAAAGAGATTCTCCTGGCATCTCACCTAAACCTACCACTGAAGAAAGGCAAATATTGAATCATTCCAATGCTTCTGCGTTTTCTTGTTATGGCAGCAGTATGGTGTTGCAGCCTTTATTTCCAACAAAGAGTTCTCATGAATCACAAAAATTATCTGAAAATATAAATACTACTCATCAGTATGATGGAAAAAAACAAAAGCAGGAAAATATCACATATCTGGTGATTGGTCAGTCTGGACAAGTTGATACAAAATGTCAACTTGAATTCTTTCCAGCCACCGGGGCCACTTCCGATAATAAGTCTATGGAACATGATAACGTTTTACATTCGATGTTCAACGCACAATCAGGCATGCATCCTAGTTGGACACCAAAATCAGTGTTCCAAAAAGAGAGTTCTCCATTTCCCGCAAGTATTTCCTCCCATTCCAATCCTAAAAGTCAGAACTCAGAACCTCATCACTGGTTGGATGATGCCACCTATACTTGCGATCAAAGCAATAATGATTGTGCTATGCATGACTCTCCATCTAATGGTCAAAGTTGTACTAGTTTTTACCATGACGCGGAGAGTCATAACGCCAGTGGTGTGGGTGAAGGCCTAGGCAGCGTAAGTGATGGAAATGCCCCTTCAGCTATTGTAGGCAAGAACAACCTTGAAAGTTCTATGAATAATGATCACCATGACGGGCTTAGAGACACAAGTTCTCATCGCACCAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGACTGAAGCGAAAAGACAGATGCTATGACAAAAAGGTCCGATATGAAAGCCGGAAAAGACAGGCAGAGAACCGCCCCCGGGTGAAAGGGCAGTTTGTTCGCCAAGTACAGGGTGAACTTGGGGTAGCTGAAACCAGAGGCTACTGA

Protein sequence

>Msa1130920

MMDHHNCKNIPLIMMSSQDSVSTVFKCMLNGAVDFLIKPVRRNELRNLWQHVWRRRNTTTTTTTTTTNKLDDVAAENNAATNHSSASVASTHKYIECTQKISEAHDMSHLKSSSSLTNTDQVKQVNSIKYERESAEYNHETGEKSTIIASKAAGCDKISTGLMLGQNYDYSETENRDEVLGTELSKASPHNNTKIHQSNNDLEDHSAGAIDLMATFDKLPKSNHANCSFSDGNTAKFDFDTQFELSLQRDSPGISPKPTTEERQILNHSNASAFSCYGSSMVLQPLFPTKSSHESQKLSENINTTHQYDGKKQKQENITYLVIGQSGQVDTKCQLEFFPATGATSDNKSMEHDNVLHSMFNAQSGMHPSWTPKSVFQKESSPFPASISSHSNPKSQNSEPHHWLDDATYTCDQSNNDCAMHDSPSNGQSCTSFYHDAESHNASGVGEGLGSVSDGNAPSAIVGKNNLESSMNNDHHDGLRDTSSHRTSQREAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQVQGELGVAETRGY*