Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129940 | sp|Q9SVD0|SMXL3_ARATH | 46.002 | 863 | 395 | 24 | 1 | 845 | 1 | 810 | 0.0 | 634 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129940 | G7I415 | 96.938 | 849 | 24 | 2 | 1 | 847 | 1 | 849 | 0.0 | 1693 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0129940 | 0.848297 | 6.705407e-60 | -8.615850e-47 |
| Msa0002580 | Msa0129940 | 0.845949 | 2.951329e-59 | -8.615850e-47 |
| Msa0003700 | Msa0129940 | 0.808097 | 3.660924e-50 | -8.615850e-47 |
| Msa0005890 | Msa0129940 | 0.816466 | 5.451487e-52 | -8.615850e-47 |
| Msa0014990 | Msa0129940 | 0.805778 | 1.132653e-49 | -8.615850e-47 |
| Msa0027820 | Msa0129940 | 0.808856 | 2.520867e-50 | -8.615850e-47 |
| Msa0034810 | Msa0129940 | 0.871170 | 8.380077e-67 | -8.615850e-47 |
| Msa0036870 | Msa0129940 | 0.801829 | 7.484920e-49 | -8.615850e-47 |
| Msa0042610 | Msa0129940 | 0.832605 | 8.592026e-56 | -8.615850e-47 |
| Msa0061340 | Msa0129940 | 0.801412 | 9.114994e-49 | -8.615850e-47 |
| Msa0081520 | Msa0129940 | 0.842435 | 2.590866e-58 | -8.615850e-47 |
| Msa0094850 | Msa0129940 | 0.826708 | 2.338706e-54 | -8.615850e-47 |
| Msa0124060 | Msa0129940 | 0.800957 | 1.129484e-48 | -8.615850e-47 |
| Msa0129940 | Msa0146260 | 0.800046 | 1.732042e-48 | -8.615850e-47 |
| Msa0129940 | Msa0152400 | 0.817472 | 3.239279e-52 | -8.615850e-47 |
| Msa0129940 | Msa0164400 | 0.804058 | 2.591980e-49 | -8.615850e-47 |
| Msa0129940 | Msa0168500 | 0.802908 | 4.487578e-49 | -8.615850e-47 |
| Msa0129940 | Msa0173890 | 0.819256 | 1.277449e-52 | -8.615850e-47 |
| Msa0129940 | Msa0174450 | 0.805631 | 1.215815e-49 | -8.615850e-47 |
| Msa0129940 | Msa0175730 | 0.900858 | 4.805502e-78 | -8.615850e-47 |
| Msa0129940 | Msa0191020 | 0.816423 | 5.572082e-52 | -8.615850e-47 |
| Msa0129940 | Msa0194820 | 0.811309 | 7.466551e-51 | -8.615850e-47 |
| Msa0129940 | Msa0194840 | 0.813492 | 2.489932e-51 | -8.615850e-47 |
| Msa0129940 | Msa0211030 | 0.814207 | 1.732769e-51 | -8.615850e-47 |
| Msa0129940 | Msa0211150 | 0.821359 | 4.209828e-53 | -8.615850e-47 |
| Msa0129940 | Msa0221000 | 0.808631 | 2.816516e-50 | -8.615850e-47 |
| Msa0129940 | Msa0223080 | 0.829390 | 5.288209e-55 | -8.615850e-47 |
| Msa0129940 | Msa0224780 | 0.808593 | 2.869424e-50 | -8.615850e-47 |
| Msa0129940 | Msa0225100 | 0.837012 | 6.680070e-57 | -8.615850e-47 |
| Msa0129940 | Msa0225860 | 0.812268 | 4.617180e-51 | -8.615850e-47 |
| Msa0129940 | Msa0233320 | 0.820621 | 6.228264e-53 | -8.615850e-47 |
| Msa0129940 | Msa0237210 | 0.804798 | 1.816850e-49 | -8.615850e-47 |
| Msa0129940 | Msa0240900 | 0.805517 | 1.284669e-49 | -8.615850e-47 |
| Msa0129940 | Msa0244640 | 0.844249 | 8.496738e-59 | -8.615850e-47 |
| Msa0129940 | Msa0253290 | 0.801954 | 7.055731e-49 | -8.615850e-47 |
| Msa0129940 | Msa0254790 | 0.819300 | 1.248886e-52 | -8.615850e-47 |
| Msa0129940 | Msa0258310 | 0.817298 | 3.546290e-52 | -8.615850e-47 |
| Msa0129940 | Msa0259240 | 0.817028 | 4.078197e-52 | -8.615850e-47 |
| Msa0129940 | Msa0261340 | 0.807962 | 3.911218e-50 | -8.615850e-47 |
| Msa0129940 | Msa0265850 | 0.840902 | 6.572252e-58 | -8.615850e-47 |
| Msa0129940 | Msa0266180 | 0.831145 | 1.970352e-55 | -8.615850e-47 |
| Msa0129940 | Msa0267920 | 0.838303 | 3.116230e-57 | -8.615850e-47 |
| Msa0129940 | Msa0283330 | 0.850165 | 2.025765e-60 | -8.615850e-47 |
| Msa0129940 | Msa0287740 | 0.839692 | 1.361032e-57 | -8.615850e-47 |
| Msa0129940 | Msa0292120 | 0.812031 | 5.202584e-51 | -8.615850e-47 |
| Msa0129940 | Msa0298470 | 0.800761 | 1.238492e-48 | -8.615850e-47 |
| Msa0129940 | Msa0300270 | 0.860179 | 2.473005e-63 | -8.615850e-47 |
| Msa0129940 | Msa0300320 | 0.832961 | 7.009535e-56 | -8.615850e-47 |
| Msa0129940 | Msa0302160 | 0.825639 | 4.200159e-54 | -8.615850e-47 |
| Msa0129940 | Msa0302170 | 0.809657 | 1.698241e-50 | -8.615850e-47 |
| Msa0129940 | Msa0315690 | 0.808766 | 2.635673e-50 | -8.615850e-47 |
| Msa0129940 | Msa0316810 | 0.803256 | 3.802059e-49 | -8.615850e-47 |
| Msa0129940 | Msa0321620 | 0.830112 | 3.528698e-55 | -8.615850e-47 |
| Msa0129940 | Msa0326590 | 0.804556 | 2.040882e-49 | -8.615850e-47 |
| Msa0129940 | Msa0330340 | 0.811314 | 7.448645e-51 | -8.615850e-47 |
| Msa0129940 | Msa0331000 | 0.805742 | 1.152745e-49 | -8.615850e-47 |
| Msa0129940 | Msa0336290 | 0.819645 | 1.041982e-52 | -8.615850e-47 |
| Msa0129940 | Msa0337700 | 0.846976 | 1.548423e-59 | -8.615850e-47 |
| Msa0129940 | Msa0339490 | 0.828718 | 7.694273e-55 | -8.615850e-47 |
| Msa0129940 | Msa0339500 | 0.801596 | 8.356731e-49 | -8.615850e-47 |
| Msa0129940 | Msa0341690 | 0.801064 | 1.073817e-48 | -8.615850e-47 |
| Msa0129940 | Msa0344930 | 0.812436 | 4.244352e-51 | -8.615850e-47 |
| Msa0129940 | Msa0360210 | 0.827815 | 1.270423e-54 | -8.615850e-47 |
| Msa0129940 | Msa0363200 | 0.841751 | 3.930124e-58 | -8.615850e-47 |
| Msa0129940 | Msa0367870 | 0.810298 | 1.235454e-50 | -8.615850e-47 |
| Msa0129940 | Msa0371170 | 0.832289 | 1.028839e-55 | -8.615850e-47 |
| Msa0129940 | Msa0376350 | 0.812613 | 3.882400e-51 | -8.615850e-47 |
| Msa0129940 | Msa0376630 | 0.846994 | 1.530623e-59 | -8.615850e-47 |
| Msa0129940 | Msa0378720 | 0.840253 | 9.716294e-58 | -8.615850e-47 |
| Msa0129940 | Msa0388770 | 0.804850 | 1.772037e-49 | -8.615850e-47 |
| Msa0129940 | Msa0392510 | 0.802108 | 6.561067e-49 | -8.615850e-47 |
| Msa0129940 | Msa0403970 | 0.813337 | 2.693465e-51 | -8.615850e-47 |
| Msa0129940 | Msa0406770 | 0.824795 | 6.649977e-54 | -8.615850e-47 |
| Msa0129940 | Msa0417880 | 0.802640 | 5.096791e-49 | -8.615850e-47 |
| Msa0129940 | Msa0418970 | 0.802158 | 6.407479e-49 | -8.615850e-47 |
| Msa0129940 | Msa0424790 | 0.806742 | 7.094905e-50 | -8.615850e-47 |
| Msa0129940 | Msa0425170 | 0.825341 | 4.943008e-54 | -8.615850e-47 |
| Msa0129940 | Msa0428920 | 0.823007 | 1.746065e-53 | -8.615850e-47 |
| Msa0129940 | Msa0430260 | 0.808169 | 3.533951e-50 | -8.615850e-47 |
| Msa0129940 | Msa0430750 | 0.810864 | 9.325779e-51 | -8.615850e-47 |
| Msa0129940 | Msa0436910 | 0.846207 | 2.510855e-59 | -8.615850e-47 |
| Msa0129940 | Msa0450720 | 0.818210 | 2.207995e-52 | -8.615850e-47 |
| Msa0129940 | Msa0452710 | 0.806460 | 8.140362e-50 | -8.615850e-47 |
| Msa0129940 | Msa0462070 | 0.819637 | 1.045841e-52 | -8.615850e-47 |
| Msa0129940 | Msa0464680 | 0.834183 | 3.473880e-56 | -8.615850e-47 |
| Msa0129940 | Msa0465400 | 0.842901 | 1.948483e-58 | -8.615850e-47 |
| Msa0129940 | Msa0467430 | 0.819927 | 8.981542e-53 | -8.615850e-47 |
| Msa0129940 | Msa0471670 | 0.814936 | 1.195006e-51 | -8.615850e-47 |
| Msa0129940 | Msa0474730 | 0.840936 | 6.438559e-58 | -8.615850e-47 |
| Msa0129940 | Msa0474940 | 0.804453 | 2.144670e-49 | -8.615850e-47 |
| Msa0129940 | Msa0475790 | 0.820453 | 6.806239e-53 | -8.615850e-47 |
| Msa0129940 | Msa0479170 | 0.829131 | 6.112528e-55 | -8.615850e-47 |
| Msa0129940 | Msa0479200 | 0.804429 | 2.169731e-49 | -8.615850e-47 |
| Msa0129940 | Msa0481530 | 0.805386 | 1.369106e-49 | -8.615850e-47 |
| Msa0129940 | Msa0488560 | 0.809509 | 1.826542e-50 | -8.615850e-47 |
| Msa0129940 | Msa0498060 | 0.827189 | 1.794731e-54 | -8.615850e-47 |
| Msa0129940 | Msa0513160 | 0.807636 | 4.589444e-50 | -8.615850e-47 |
| Msa0129940 | Msa0516170 | 0.809641 | 1.711226e-50 | -8.615850e-47 |
| Msa0129940 | Msa0529890 | 0.814562 | 1.446319e-51 | -8.615850e-47 |
| Msa0129940 | Msa0531180 | 0.811754 | 5.978103e-51 | -8.615850e-47 |
| Msa0129940 | Msa0534720 | 0.803651 | 3.148835e-49 | -8.615850e-47 |
| Msa0129940 | Msa0545340 | 0.808147 | 3.573385e-50 | -8.615850e-47 |
| Msa0129940 | Msa0574390 | 0.816390 | 5.669894e-52 | -8.615850e-47 |
| Msa0129940 | Msa0576680 | 0.807074 | 6.036298e-50 | -8.615850e-47 |
| Msa0129940 | Msa0580370 | 0.834524 | 2.851596e-56 | -8.615850e-47 |
| Msa0129940 | Msa0585560 | 0.814926 | 1.201386e-51 | -8.615850e-47 |
| Msa0129940 | Msa0597790 | 0.808426 | 3.114721e-50 | -8.615850e-47 |
| Msa0129940 | Msa0611210 | 0.810095 | 1.366412e-50 | -8.615850e-47 |
| Msa0129940 | Msa0620230 | 0.806037 | 9.993944e-50 | -8.615850e-47 |
| Msa0129940 | Msa0623330 | 0.804058 | 2.591630e-49 | -8.615850e-47 |
| Msa0129940 | Msa0624470 | 0.803569 | 3.273888e-49 | -8.615850e-47 |
| Msa0129940 | Msa0625720 | 0.814414 | 1.559894e-51 | -8.615850e-47 |
| Msa0129940 | Msa0626450 | 0.811485 | 6.837077e-51 | -8.615850e-47 |
| Msa0129940 | Msa0626490 | 0.808383 | 3.181548e-50 | -8.615850e-47 |
| Msa0129940 | Msa0651550 | 0.809812 | 1.572549e-50 | -8.615850e-47 |
| Msa0129940 | Msa0662240 | 0.801787 | 7.635461e-49 | -8.615850e-47 |
| Msa0129940 | Msa0663390 | 0.804866 | 1.758785e-49 | -8.615850e-47 |
| Msa0129940 | Msa0664600 | 0.809378 | 1.949532e-50 | -8.615850e-47 |
| Msa0129940 | Msa0679870 | 0.813720 | 2.219269e-51 | -8.615850e-47 |
| Msa0129940 | Msa0717890 | 0.834326 | 3.197957e-56 | -8.615850e-47 |
| Msa0129940 | Msa0727640 | 0.806453 | 8.166359e-50 | -8.615850e-47 |
| Msa0129940 | Msa0730430 | 0.810501 | 1.116942e-50 | -8.615850e-47 |
| Msa0129940 | Msa0736960 | 0.808772 | 2.627730e-50 | -8.615850e-47 |
| Msa0129940 | Msa0741220 | 0.803545 | 3.311928e-49 | -8.615850e-47 |
| Msa0129940 | Msa0741240 | 0.809134 | 2.199134e-50 | -8.615850e-47 |
| Msa0129940 | Msa0742740 | 0.808494 | 3.012949e-50 | -8.615850e-47 |
| Msa0129940 | Msa0778590 | 0.802330 | 5.903583e-49 | -8.615850e-47 |
| Msa0129940 | Msa0780270 | 0.837671 | 4.529288e-57 | -8.615850e-47 |
| Msa0129940 | Msa0795870 | 0.833968 | 3.931568e-56 | -8.615850e-47 |
| Msa0129940 | Msa0796160 | 0.809903 | 1.503179e-50 | -8.615850e-47 |
| Msa0129940 | Msa0823820 | 0.807131 | 5.872591e-50 | -8.615850e-47 |
| Msa0129940 | Msa0824660 | 0.807602 | 4.665031e-50 | -8.615850e-47 |
| Msa0129940 | Msa0828560 | 0.841173 | 5.579272e-58 | -8.615850e-47 |
| Msa0129940 | Msa0829300 | 0.852921 | 3.361211e-61 | -8.615850e-47 |
| Msa0129940 | Msa0829330 | 0.854733 | 1.011121e-61 | -8.615850e-47 |
| Msa0129940 | Msa0832120 | 0.800268 | 1.561019e-48 | -8.615850e-47 |
| Msa0129940 | Msa0833650 | 0.836429 | 9.407638e-57 | -8.615850e-47 |
| Msa0129940 | Msa0833760 | 0.818860 | 1.572054e-52 | -8.615850e-47 |
| Msa0129940 | Msa0861510 | 0.832816 | 7.619142e-56 | -8.615850e-47 |
| Msa0129940 | Msa0861530 | 0.800481 | 1.412643e-48 | -8.615850e-47 |
| Msa0129940 | Msa0861600 | 0.842161 | 3.061052e-58 | -8.615850e-47 |
| Msa0129940 | Msa0861850 | 0.827903 | 1.209690e-54 | -8.615850e-47 |
| Msa0129940 | Msa0861870 | 0.807713 | 4.418067e-50 | -8.615850e-47 |
| Msa0129940 | Msa0863010 | 0.808849 | 2.530131e-50 | -8.615850e-47 |
| Msa0129940 | Msa0866520 | 0.817068 | 3.994150e-52 | -8.615850e-47 |
| Msa0129940 | Msa0875290 | 0.814618 | 1.405486e-51 | -8.615850e-47 |
| Msa0129940 | Msa0894790 | 0.801301 | 9.607027e-49 | -8.615850e-47 |
| Msa0129940 | Msa0896410 | 0.805909 | 1.062890e-49 | -8.615850e-47 |
| Msa0129940 | Msa0896540 | 0.810989 | 8.758754e-51 | -8.615850e-47 |
| Msa0129940 | Msa0898750 | 0.823639 | 1.242793e-53 | -8.615850e-47 |
| Msa0129940 | Msa0928130 | 0.823251 | 1.531525e-53 | -8.615850e-47 |
| Msa0129940 | Msa0964310 | 0.819918 | 9.023068e-53 | -8.615850e-47 |
| Msa0129940 | Msa0967380 | 0.802980 | 4.337139e-49 | -8.615850e-47 |
| Msa0129940 | Msa0967870 | 0.830283 | 3.203543e-55 | -8.615850e-47 |
| Msa0129940 | Msa0972100 | 0.800009 | 1.762336e-48 | -8.615850e-47 |
| Msa0129940 | Msa1004800 | 0.803264 | 3.786942e-49 | -8.615850e-47 |
| Msa0129940 | Msa1004840 | 0.800706 | 1.270698e-48 | -8.615850e-47 |
| Msa0129940 | Msa1019000 | 0.802538 | 5.349528e-49 | -8.615850e-47 |
| Msa0129940 | Msa1019430 | 0.811630 | 6.359534e-51 | -8.615850e-47 |
| Msa0129940 | Msa1019470 | 0.819848 | 9.360882e-53 | -8.615850e-47 |
| Msa0129940 | Msa1020630 | 0.808365 | 3.209546e-50 | -8.615850e-47 |
| Msa0129940 | Msa1031930 | 0.839329 | 1.691006e-57 | -8.615850e-47 |
| Msa0129940 | Msa1034500 | 0.801376 | 9.269638e-49 | -8.615850e-47 |
| Msa0129940 | Msa1035960 | 0.800515 | 1.389818e-48 | -8.615850e-47 |
| Msa0129940 | Msa1041670 | 0.816621 | 5.030980e-52 | -8.615850e-47 |
| Msa0129940 | Msa1043370 | 0.825143 | 5.504970e-54 | -8.615850e-47 |
| Msa0129940 | Msa1050910 | 0.821152 | 4.699173e-53 | -8.615850e-47 |
| Msa0129940 | Msa1050960 | 0.800343 | 1.506757e-48 | -8.615850e-47 |
| Msa0129940 | Msa1071770 | 0.813248 | 2.818119e-51 | -8.615850e-47 |
| Msa0129940 | Msa1094190 | 0.807016 | 6.210148e-50 | -8.615850e-47 |
| Msa0129940 | Msa1108160 | 0.819534 | 1.104105e-52 | -8.615850e-47 |
| Msa0129940 | Msa1113800 | 0.826152 | 3.172392e-54 | -8.615850e-47 |
| Msa0129940 | Msa1118600 | 0.804029 | 2.627877e-49 | -8.615850e-47 |
| Msa0129940 | Msa1122520 | 0.801398 | 9.174934e-49 | -8.615850e-47 |
| Msa0129940 | Msa1123380 | 0.807139 | 5.847310e-50 | -8.615850e-47 |
| Msa0129940 | Msa1124950 | 0.806449 | 8.180750e-50 | -8.615850e-47 |
| Msa0129940 | Msa1132700 | 0.816311 | 5.902455e-52 | -8.615850e-47 |
| Msa0129940 | Msa1132840 | 0.838792 | 2.330416e-57 | -8.615850e-47 |
| Msa0129940 | Msa1145810 | 0.801185 | 1.014329e-48 | -8.615850e-47 |
| Msa0129940 | Msa1150820 | 0.805340 | 1.399729e-49 | -8.615850e-47 |
| Msa0129940 | Msa1155170 | -0.812655 | 3.799833e-51 | -8.615850e-47 |
| Msa0129940 | Msa1158830 | 0.814839 | 1.256031e-51 | -8.615850e-47 |
| Msa0129940 | Msa1160500 | 0.824193 | 9.214283e-54 | -8.615850e-47 |
| Msa0129940 | Msa1161580 | 0.800868 | 1.177693e-48 | -8.615850e-47 |
| Msa0129940 | Msa1165740 | 0.806056 | 9.898795e-50 | -8.615850e-47 |
| Msa0129940 | Msa1166560 | 0.812708 | 3.701138e-51 | -8.615850e-47 |
| Msa0129940 | Msa1184330 | 0.825631 | 4.220169e-54 | -8.615850e-47 |
| Msa0129940 | Msa1189070 | 0.836181 | 1.087741e-56 | -8.615850e-47 |
| Msa0129940 | Msa1193290 | 0.803619 | 3.197538e-49 | -8.615850e-47 |
| Msa0129940 | Msa1196440 | 0.826055 | 3.345714e-54 | -8.615850e-47 |
| Msa0129940 | Msa1199570 | 0.835256 | 1.865562e-56 | -8.615850e-47 |
| Msa0129940 | Msa1205280 | 0.819084 | 1.398579e-52 | -8.615850e-47 |
| Msa0129940 | Msa1208430 | 0.815552 | 8.720669e-52 | -8.615850e-47 |
| Msa0129940 | Msa1209450 | 0.800152 | 1.647752e-48 | -8.615850e-47 |
| Msa0129940 | Msa1209460 | 0.807782 | 4.272009e-50 | -8.615850e-47 |
| Msa0129940 | Msa1221060 | 0.807775 | 4.286907e-50 | -8.615850e-47 |
| Msa0129940 | Msa1225860 | -0.800447 | 1.435150e-48 | -8.615850e-47 |
| Msa0129940 | Msa1227940 | 0.817541 | 3.125616e-52 | -8.615850e-47 |
| Msa0129940 | Msa1228200 | 0.859747 | 3.338657e-63 | -8.615850e-47 |
| Msa0129940 | Msa1239920 | 0.812155 | 4.886733e-51 | -8.615850e-47 |
| Msa0129940 | Msa1258340 | 0.808993 | 2.356707e-50 | -8.615850e-47 |
| Msa0129940 | Msa1265650 | 0.847557 | 1.072427e-59 | -8.615850e-47 |
| Msa0129940 | Msa1267770 | 0.826756 | 2.278209e-54 | -8.615850e-47 |
| Msa0129940 | Msa1271270 | 0.813143 | 2.971944e-51 | -8.615850e-47 |
| Msa0129940 | Msa1276660 | 0.834710 | 2.560813e-56 | -8.615850e-47 |
| Msa0129940 | Msa1284550 | 0.819657 | 1.035429e-52 | -8.615850e-47 |
| Msa0129940 | Msa1297230 | 0.813532 | 2.441233e-51 | -8.615850e-47 |
| Msa0129940 | Msa1298370 | 0.805651 | 1.204465e-49 | -8.615850e-47 |
| Msa0129940 | Msa1303560 | 0.851391 | 9.151391e-61 | -8.615850e-47 |
| Msa0129940 | Msa1303650 | 0.843183 | 1.638530e-58 | -8.615850e-47 |
| Msa0129940 | Msa1314650 | 0.802868 | 4.572538e-49 | -8.615850e-47 |
| Msa0129940 | Msa1328640 | 0.812737 | 3.646887e-51 | -8.615850e-47 |
| Msa0129940 | Msa1328710 | 0.830912 | 2.247605e-55 | -8.615850e-47 |
| Msa0129940 | Msa1330420 | 0.808574 | 2.897259e-50 | -8.615850e-47 |
| Msa0129940 | Msa1333480 | 0.834997 | 2.168108e-56 | -8.615850e-47 |
| Msa0129940 | Msa1353980 | 0.804880 | 1.746966e-49 | -8.615850e-47 |
| Msa0129940 | Msa1356830 | 0.829301 | 5.556211e-55 | -8.615850e-47 |
| Msa0129940 | Msa1361410 | 0.809982 | 1.445150e-50 | -8.615850e-47 |
| Msa0129940 | Msa1368430 | 0.814923 | 1.203081e-51 | -8.615850e-47 |
| Msa0129940 | Msa1369150 | 0.801099 | 1.056251e-48 | -8.615850e-47 |
| Msa0129940 | Msa1373100 | 0.806524 | 7.888320e-50 | -8.615850e-47 |
| Msa0129940 | Msa1374040 | 0.807883 | 4.066974e-50 | -8.615850e-47 |
| Msa0129940 | Msa1390670 | 0.815977 | 7.011750e-52 | -8.615850e-47 |
| Msa0129940 | Msa1392880 | 0.821668 | 3.573324e-53 | -8.615850e-47 |
| Msa0129940 | Msa1402400 | 0.813273 | 2.782761e-51 | -8.615850e-47 |
| Msa0129940 | Msa1422950 | 0.806323 | 8.696599e-50 | -8.615850e-47 |
| Msa0129940 | Msa1423350 | 0.807832 | 4.169019e-50 | -8.615850e-47 |
| Msa0129940 | Msa1425880 | 0.821199 | 4.583075e-53 | -8.615850e-47 |
| Msa0129940 | Msa1432500 | 0.812139 | 4.927301e-51 | -8.615850e-47 |
| Msa0129940 | Msa1433810 | 0.835743 | 1.404922e-56 | -8.615850e-47 |
| Msa0129940 | Msa1437940 | 0.815535 | 8.798382e-52 | -8.615850e-47 |
| Msa0129940 | Msa1439610 | 0.824624 | 7.296954e-54 | -8.615850e-47 |
| Msa0129940 | Msa1440310 | 0.807160 | 5.790280e-50 | -8.615850e-47 |
| Msa0129940 | Msa1440880 | 0.811615 | 6.406937e-51 | -8.615850e-47 |
| Msa0129940 | Msa1440960 | 0.800988 | 1.112817e-48 | -8.615850e-47 |
| Msa0129940 | Msa1445190 | 0.810647 | 1.038763e-50 | -8.615850e-47 |
| Msa0129940 | Msa1446820 | 0.825751 | 3.952111e-54 | -8.615850e-47 |
| Msa0129940 | Msa1450100 | 0.806879 | 6.639648e-50 | -8.615850e-47 |
| Msa0129940 | Msa1451160 | 0.809417 | 1.911859e-50 | -8.615850e-47 |
| Msa0129940 | Msa1464810 | 0.812561 | 3.985868e-51 | -8.615850e-47 |
| Msa0129940 | Msa1466540 | 0.800410 | 1.460560e-48 | -8.615850e-47 |
| Msa0129940 | Msa1466920 | 0.815537 | 8.786077e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129940 | MtrunA17_Chr1g0197121 | 96.938 | 849 | 24 | 2 | 1 | 847 | 1 | 849 | 0.0 | 1693 |
| Msa0129940 | MtrunA17_Chr1g0177421 | 47.691 | 866 | 373 | 23 | 1 | 847 | 1 | 805 | 0.0 | 653 |
| Msa0129940 | MtrunA17_Chr2g0298801 | 34.354 | 751 | 383 | 25 | 1 | 694 | 1 | 698 | 4.89e-102 | 339 |
| Msa0129940 | MtrunA17_Chr4g0073021 | 30.575 | 870 | 461 | 33 | 1 | 784 | 1 | 813 | 1.44e-91 | 311 |
| Msa0129940 | MtrunA17_Chr4g0071701 | 63.068 | 176 | 50 | 5 | 1 | 167 | 1 | 170 | 7.19e-54 | 201 |
| Msa0129940 | MtrunA17_Chr3g0105051 | 26.316 | 874 | 507 | 30 | 11 | 787 | 10 | 843 | 5.78e-48 | 184 |
| Msa0129940 | MtrunA17_Chr5g0430201 | 25.308 | 893 | 492 | 33 | 11 | 784 | 10 | 846 | 2.16e-38 | 154 |
| Msa0129940 | MtrunA17_Chr3g0113631 | 27.459 | 488 | 273 | 18 | 11 | 457 | 10 | 457 | 2.20e-26 | 116 |
| Msa0129940 | MtrunA17_Chr4g0061371 | 21.365 | 791 | 507 | 31 | 24 | 784 | 17 | 722 | 1.31e-20 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129940 | AT3G52490.1 | 46.002 | 863 | 395 | 24 | 1 | 845 | 1 | 810 | 0.0 | 634 |
| Msa0129940 | AT5G57710.1 | 31.840 | 848 | 430 | 31 | 1 | 784 | 1 | 764 | 2.98e-96 | 323 |
| Msa0129940 | AT5G57130.1 | 37.585 | 588 | 251 | 18 | 1 | 490 | 1 | 570 | 2.53e-90 | 308 |
| Msa0129940 | AT4G29920.2 | 36.315 | 559 | 274 | 16 | 1 | 495 | 1 | 541 | 1.22e-88 | 303 |
| Msa0129940 | AT4G29920.1 | 36.331 | 556 | 275 | 16 | 1 | 495 | 1 | 538 | 1.78e-88 | 302 |
| Msa0129940 | AT4G30350.1 | 31.152 | 825 | 425 | 28 | 1 | 786 | 1 | 721 | 3.91e-83 | 286 |
| Msa0129940 | AT2G29970.1 | 26.322 | 832 | 491 | 26 | 11 | 781 | 10 | 780 | 7.85e-56 | 209 |
| Msa0129940 | AT1G07200.2 | 25.568 | 837 | 484 | 28 | 11 | 784 | 10 | 770 | 7.67e-48 | 184 |
| Msa0129940 | AT2G40130.1 | 31.990 | 397 | 221 | 14 | 11 | 382 | 10 | 382 | 7.29e-36 | 147 |
| Msa0129940 | AT2G40130.2 | 31.990 | 397 | 221 | 14 | 11 | 382 | 10 | 382 | 8.37e-36 | 146 |
| Msa0129940 | AT1G74310.1 | 25.806 | 310 | 195 | 11 | 11 | 313 | 4 | 285 | 5.92e-16 | 83.2 |
| Msa0129940 | AT1G74310.2 | 25.806 | 310 | 195 | 11 | 11 | 313 | 4 | 285 | 6.21e-16 | 82.8 |
Find 139 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTATATATGTTAAATT+TGG | 0.080267 | 1_3:-60002134 | Msa0129940:three_prime_UTR |
| ACCCTTCCCTAGAAACTATT+TGG | 0.153510 | 1_3:-60004013 | Msa0129940:CDS |
| AGAGGGGTTATTCTTTATTT+AGG | 0.203554 | 1_3:-60004218 | Msa0129940:CDS |
| TTATTCAATGACTTGACTTT+TGG | 0.237281 | 1_3:-60003787 | Msa0129940:CDS |
| GAGTAGTAGATTATGGCTTA+TGG | 0.242761 | 1_3:-60004078 | Msa0129940:CDS |
| TCTCGATCGTTCCGCGTCTT+TGG | 0.250193 | 1_3:+60004774 | None:intergenic |
| AGGCTTAAGGCTAAGTTCTT+TGG | 0.260826 | 1_3:+60004547 | None:intergenic |
| GAGCTAGCTAAAGTTGTCTT+TGG | 0.278238 | 1_3:-60002672 | Msa0129940:CDS |
| TCCAACAAAGCCAACTAAAT+TGG | 0.291498 | 1_3:-60003133 | Msa0129940:CDS |
| TCCTTCACTTTCCAATGCTT+TGG | 0.297130 | 1_3:-60004825 | Msa0129940:CDS |
| TATAATAACTCACACTCTTT+TGG | 0.298041 | 1_3:+60003083 | None:intergenic |
| AAGCCTTGTGAAAAGCTATA+TGG | 0.299255 | 1_3:-60004243 | Msa0129940:CDS |
| CTTGTCAGGGAGGTAAATTT+TGG | 0.301446 | 1_3:+60005275 | None:intergenic |
| GTTCTATATATGTTAAATTT+GGG | 0.303820 | 1_3:-60002133 | Msa0129940:three_prime_UTR |
| TCACTTGAAGAAGCTGAGTT+TGG | 0.312758 | 1_3:+60002951 | None:intergenic |
| GAAGCTCCCAAATAGTTTCT+AGG | 0.313524 | 1_3:+60004006 | None:intergenic |
| TCCACGCAAAGTCCATTATT+AGG | 0.325092 | 1_3:-60004866 | Msa0129940:CDS |
| TGAAATGGTTGTTTGAGTTT+TGG | 0.332695 | 1_3:-60004190 | Msa0129940:CDS |
| TTTGACAAAAGATCTGGTTT+TGG | 0.333075 | 1_3:+60002987 | None:intergenic |
| TGTAACAACTTTATGACAAT+TGG | 0.336252 | 1_3:-60002645 | Msa0129940:CDS |
| GCTGAGTTTGGACTTGAGTT+AGG | 0.348418 | 1_3:+60002963 | None:intergenic |
| CTATTGTTCTGTTGAACATA+TGG | 0.348488 | 1_3:-60004138 | Msa0129940:CDS |
| TGTTGAGTGAATTAGTAAAA+AGG | 0.353427 | 1_3:-60004454 | Msa0129940:CDS |
| GCCAATTTAGTTGGCTTTGT+TGG | 0.356470 | 1_3:+60003132 | None:intergenic |
| AGTAGAGTTATGAGAGAAGC+TGG | 0.362568 | 1_3:-60004671 | Msa0129940:CDS |
| CTCCTTTGAGATATTCTCTC+TGG | 0.362644 | 1_3:+60002692 | None:intergenic |
| CTGCCAACAGGAATTGTAAA+AGG | 0.362782 | 1_3:+60003981 | None:intergenic |
| TCATTGTTAACACAATCTAT+AGG | 0.381114 | 1_3:+60004491 | None:intergenic |
| TTTATTTAGGTGATTTGAAA+TGG | 0.382295 | 1_3:-60004205 | Msa0129940:CDS |
| TCAAGCTAAGGAGAGAAGTA+TGG | 0.390308 | 1_3:-60003812 | Msa0129940:CDS |
| GCCATGCTTGCAACTTCAAC+AGG | 0.392420 | 1_3:-60004986 | Msa0129940:CDS |
| TGCAGCTTTCAAACGTGCTC+AGG | 0.397418 | 1_3:-60004801 | Msa0129940:CDS |
| AGCACTTATTTGCAAAGGTT+TGG | 0.400652 | 1_3:-60002537 | Msa0129940:CDS |
| AGTTGATCACTTTACTCAAA+AGG | 0.402733 | 1_3:-60002460 | Msa0129940:CDS |
| TTGAGGAATCATCATTTCCT+AGG | 0.403714 | 1_3:+60002604 | None:intergenic |
| TTAAGGATCTCTGCAAGAAA+TGG | 0.403868 | 1_3:-60003277 | Msa0129940:CDS |
| TCCTCATAGAGTGTTCTTCA+TGG | 0.406650 | 1_3:-60002496 | Msa0129940:CDS |
| GCCTAAGTTTGAACTTTGAC+AGG | 0.409277 | 1_3:-60003953 | Msa0129940:intron |
| AAATTACAGGCCAATTTAGT+TGG | 0.414926 | 1_3:+60003123 | None:intergenic |
| GTTAACACAATCTATAGGTT+TGG | 0.415012 | 1_3:+60004496 | None:intergenic |
| GAATATTGAGGACCTAATAA+TGG | 0.416354 | 1_3:+60004854 | None:intergenic |
| TTTGTTGAAGAAACTTCAAT+TGG | 0.417218 | 1_3:+60004599 | None:intergenic |
| CCCTTCCCTAGAAACTATTT+GGG | 0.418380 | 1_3:-60004012 | Msa0129940:CDS |
| ATAGGAAAATGCAAGACTTA+AGG | 0.420370 | 1_3:-60003294 | Msa0129940:intron |
| ACAAAGGCTACTAGTTGGTT+TGG | 0.420923 | 1_3:+60005196 | None:intergenic |
| AAGTAGTCTAAACCTCTCTT+TGG | 0.421938 | 1_3:-60002265 | Msa0129940:CDS |
| AAGCCTCAAGTTCTTAGCCT+TGG | 0.424000 | 1_3:-60004530 | Msa0129940:CDS |
| AGTAGTAGATTATGGCTTAT+GGG | 0.426917 | 1_3:-60004077 | Msa0129940:CDS |
| TTAGGATTTGACAAAAGATC+TGG | 0.427273 | 1_3:+60002981 | None:intergenic |
| GTGATGGAAAGGTTTGAGAT+AGG | 0.428812 | 1_3:-60004371 | Msa0129940:CDS |
| CCTCAAGTTCTTAGCCTTGG+TGG | 0.431448 | 1_3:-60004527 | Msa0129940:CDS |
| TCAAGTGAGGAAAATGAAGT+TGG | 0.432178 | 1_3:+60003170 | None:intergenic |
| GGCTAAGAACTTGAGGCTTA+AGG | 0.443449 | 1_3:+60004534 | None:intergenic |
| AAAAGAAACACTGTTATTGT+AGG | 0.444630 | 1_3:-60004431 | Msa0129940:CDS |
| GTGGTGAGAGTAGTAGATTA+TGG | 0.446323 | 1_3:-60004085 | Msa0129940:CDS |
| AAGTTACACAGTGGAAGATC+AGG | 0.449020 | 1_3:-60003614 | Msa0129940:intron |
| TGTAATTTCTGAACAAGAAA+AGG | 0.450081 | 1_3:-60003108 | Msa0129940:CDS |
| TTTGGAGATAAAGCAGGAGT+TGG | 0.452290 | 1_3:-60003769 | Msa0129940:CDS |
| GAAAAGACCAAGAGATGAGT+TGG | 0.452465 | 1_3:-60002562 | Msa0129940:CDS |
| GTGAAAAGCTATATGGGAAG+AGG | 0.452953 | 1_3:-60004236 | Msa0129940:CDS |
| CAAGATTCTCTGTGATGCCT+TGG | 0.460963 | 1_3:-60002871 | Msa0129940:CDS |
| TGAATCATTTCTTTATGTTG+TGG | 0.463114 | 1_3:+60002837 | None:intergenic |
| GGAAGTTGAAAAGAAATTTG+TGG | 0.463470 | 1_3:-60004273 | Msa0129940:CDS |
| TTTCAGCTATAGTTATTAGT+GGG | 0.463929 | 1_3:-60002061 | Msa0129940:three_prime_UTR |
| GATGATGATGATTGCTATGA+TGG | 0.465266 | 1_3:-60003044 | Msa0129940:CDS |
| TAAGGCTAAGTTCTTTGGAC+TGG | 0.466737 | 1_3:+60004552 | None:intergenic |
| TTCTGTTGAACATATGGTAA+TGG | 0.471687 | 1_3:-60004132 | Msa0129940:CDS |
| CTTAGGCTTAGGCTGCCAAC+AGG | 0.474888 | 1_3:+60003969 | None:intergenic |
| AGCCTTGTGAAAAGCTATAT+GGG | 0.482010 | 1_3:-60004242 | Msa0129940:CDS |
| GTTGATCACTTTACTCAAAA+GGG | 0.487558 | 1_3:-60002459 | Msa0129940:CDS |
| AACATGGCTTCAAAATTGTA+AGG | 0.492394 | 1_3:-60003644 | Msa0129940:CDS |
| TCCTGTTGAAGTTGCAAGCA+TGG | 0.496549 | 1_3:+60004985 | None:intergenic |
| CTCATAACTCTACTAACACT+TGG | 0.499188 | 1_3:+60004680 | None:intergenic |
| ACCTGTCAAAGTTCAAACTT+AGG | 0.500140 | 1_3:+60003952 | None:intergenic |
| TTTGCGTGGAAGCTGGTAAA+CGG | 0.504645 | 1_3:+60004879 | None:intergenic |
| AATGGACTTTGCGTGGAAGC+TGG | 0.504770 | 1_3:+60004872 | None:intergenic |
| AGCATTATCATGATCTTCAA+TGG | 0.505808 | 1_3:+60002230 | None:intergenic |
| TGAGATAGGTAATGTTCCTA+TGG | 0.506308 | 1_3:-60004357 | Msa0129940:CDS |
| AGTGGAACAGATTCACCATC+AGG | 0.509559 | 1_3:+60002399 | None:intergenic |
| CAAAGTTCAAACTTAGGCTT+AGG | 0.510365 | 1_3:+60003958 | None:intergenic |
| AAAAGACCAAGAGATGAGTT+GGG | 0.510626 | 1_3:-60002561 | Msa0129940:CDS |
| CATCATGTGCTGAAAACAAA+GGG | 0.511404 | 1_3:-60002314 | Msa0129940:CDS |
| GTGCTTCCCAACTCATCTCT+TGG | 0.513956 | 1_3:+60002555 | None:intergenic |
| ATATTCCTAAAACATATAAG+AGG | 0.515258 | 1_3:+60004305 | None:intergenic |
| GAAAGCTGCAACCAAAGCAT+TGG | 0.516890 | 1_3:+60004814 | None:intergenic |
| AGAAAACAAAGGCTACTAGT+TGG | 0.524805 | 1_3:+60005191 | None:intergenic |
| CCCAAATAGTTTCTAGGGAA+GGG | 0.525348 | 1_3:+60004012 | None:intergenic |
| AAGCTCCCAAATAGTTTCTA+GGG | 0.525655 | 1_3:+60004007 | None:intergenic |
| TGAAAAGCTATATGGGAAGA+GGG | 0.530391 | 1_3:-60004235 | Msa0129940:CDS |
| TAGCTAAAGGAGTGATGGAA+AGG | 0.535032 | 1_3:-60004382 | Msa0129940:CDS |
| TCTTGTTTGTCAAGAATCGA+AGG | 0.535551 | 1_3:+60003224 | None:intergenic |
| GAAAATGAAGTTGGTGATGA+AGG | 0.541235 | 1_3:+60003179 | None:intergenic |
| TCCCAAATAGTTTCTAGGGA+AGG | 0.541487 | 1_3:+60004011 | None:intergenic |
| ATTTACCTCCCTGACAAGAA+AGG | 0.546449 | 1_3:-60005270 | Msa0129940:five_prime_UTR |
| AGGGAAAGAGACCATGATAG+AGG | 0.549596 | 1_3:-60002295 | Msa0129940:CDS |
| AGCTTCTTCAAGTGAAGCAG+TGG | 0.550112 | 1_3:-60002943 | Msa0129940:CDS |
| TCCATGAAGAACACTCTATG+AGG | 0.550163 | 1_3:+60002495 | None:intergenic |
| AATGCTGAGGGAGTAGCTAA+AGG | 0.550237 | 1_3:-60004395 | Msa0129940:CDS |
| TCAAGAGCTTTGCATTGAAG+AGG | 0.552190 | 1_3:+60004926 | None:intergenic |
| GCAGTTCAAGCTTGCCAACA+TGG | 0.553169 | 1_3:-60003660 | Msa0129940:CDS |
| TGTACATATCTTAACTCCAT+AGG | 0.560856 | 1_3:+60004341 | None:intergenic |
| TGGGAAGCACTTATTTGCAA+AGG | 0.564536 | 1_3:-60002542 | Msa0129940:CDS |
| TCTTCAAGTGAAGCAGTGGA+TGG | 0.565452 | 1_3:-60002939 | Msa0129940:CDS |
| TGAGGAATCATCATTTCCTA+GGG | 0.565890 | 1_3:+60002605 | None:intergenic |
| AGAGAGTGTTTCTAATGCTG+AGG | 0.567960 | 1_3:-60004408 | Msa0129940:CDS |
| CAAGAGCTTTGCATTGAAGA+GGG | 0.570256 | 1_3:+60004927 | None:intergenic |
| GTGAATCTAGCAACAAGAAG+AGG | 0.571262 | 1_3:-60005043 | Msa0129940:CDS |
| ACTTTGATGATCCTCTATCA+TGG | 0.571869 | 1_3:+60002284 | None:intergenic |
| ATGAGCACTTTCTCTTCCCT+AGG | 0.572261 | 1_3:-60002621 | Msa0129940:CDS |
| ACCTAATAATGGACTTTGCG+TGG | 0.572737 | 1_3:+60004865 | None:intergenic |
| ATCAAGAAAGCAATTGAATG+TGG | 0.579531 | 1_3:-60002435 | Msa0129940:CDS |
| GGGAGTAGCTAAAGGAGTGA+TGG | 0.580375 | 1_3:-60004387 | Msa0129940:CDS |
| GTAGTAGATTATGGCTTATG+GGG | 0.580393 | 1_3:-60004076 | Msa0129940:CDS |
| TGGTGAATCTGTTCCACTCA+AGG | 0.581569 | 1_3:-60002394 | Msa0129940:CDS |
| TTGTGGAAACTTGTTCTCCA+AGG | 0.583160 | 1_3:+60002854 | None:intergenic |
| GAAGGAGTGGTTGAATATTG+AGG | 0.588763 | 1_3:+60004842 | None:intergenic |
| GAGAGTGTTTCTAATGCTGA+GGG | 0.596744 | 1_3:-60004407 | Msa0129940:CDS |
| ACCAAAGCATTGGAAAGTGA+AGG | 0.598141 | 1_3:+60004824 | None:intergenic |
| TCATCATGTGCTGAAAACAA+AGG | 0.599097 | 1_3:-60002315 | Msa0129940:CDS |
| ATGACAATGGCATCCTTGAG+TGG | 0.607162 | 1_3:+60002381 | None:intergenic |
| CCACCAAGGCTAAGAACTTG+AGG | 0.610990 | 1_3:+60004527 | None:intergenic |
| TTCAGCTATAGTTATTAGTG+GGG | 0.612891 | 1_3:-60002060 | Msa0129940:three_prime_UTR |
| CTTGTTTGTCAAGAATCGAA+GGG | 0.613568 | 1_3:+60003225 | None:intergenic |
| TTCACTACTGAAAATGACAA+TGG | 0.618443 | 1_3:+60002368 | None:intergenic |
| GATCATGATAATGCTGACAT+TGG | 0.618644 | 1_3:-60002222 | Msa0129940:CDS |
| AGAGAGAGAGTAGAAAACAA+AGG | 0.624359 | 1_3:+60005180 | None:intergenic |
| GAAAAGCTATATGGGAAGAG+GGG | 0.626232 | 1_3:-60004234 | Msa0129940:CDS |
| AGCATTGGAAAGTGAAGGAG+TGG | 0.626564 | 1_3:+60004829 | None:intergenic |
| TTATTATACACTGAAAGTGC+TGG | 0.631798 | 1_3:-60003068 | Msa0129940:CDS |
| AAAATCATAAGCAAGAAACA+TGG | 0.634641 | 1_3:-60002743 | Msa0129940:CDS |
| ATGGCACTAGCAACATGAAG+AGG | 0.635949 | 1_3:+60005004 | None:intergenic |
| CTATATTCAGATCCAAAGAG+AGG | 0.642276 | 1_3:+60002253 | None:intergenic |
| AGCCAGAGAGAATATCTCAA+AGG | 0.643310 | 1_3:-60002694 | Msa0129940:CDS |
| TTGTGCCTTTCTTGTCAGGG+AGG | 0.643684 | 1_3:+60005265 | None:intergenic |
| GGTACAATAAGAGCAAGATG+TGG | 0.689679 | 1_3:+60005217 | None:intergenic |
| GGAAGTATAACAATTCCTGA+TGG | 0.693696 | 1_3:-60002414 | Msa0129940:CDS |
| GGAAGAAAGAAGTTACACAG+TGG | 0.706086 | 1_3:-60003623 | Msa0129940:CDS |
| GCTCAGGCTCACCAAAGACG+CGG | 0.718198 | 1_3:-60004785 | Msa0129940:CDS |
| GTTTGGTGTATGAACCACCA+AGG | 0.726709 | 1_3:+60004513 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAATATTGGTTATT+TGG | + | chr1_3:60002095-60002114 | None:intergenic | 10.0% |
| !! | AAATAACAAAATTACTTTAA+TGG | - | chr1_3:60003745-60003764 | Msa0129940:CDS | 10.0% |
| !!! | AATTAGTTTTAATTTGTAAT+AGG | - | chr1_3:60005063-60005082 | Msa0129940:CDS | 10.0% |
| !! | GATCTTGAAAAAAAAAATAT+TGG | + | chr1_3:60002103-60002122 | None:intergenic | 15.0% |
| !! | AAAGATAAGAAAATAGAAAA+AGG | + | chr1_3:60003909-60003928 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTTTATGTGAAAT+AGG | - | chr1_3:60003926-60003945 | Msa0129940:intron | 15.0% |
| !! | TGTTCTATATATGTTAAATT+TGG | - | chr1_3:60005104-60005123 | Msa0129940:CDS | 15.0% |
| !! | GTTCTATATATGTTAAATTT+GGG | - | chr1_3:60005105-60005124 | Msa0129940:CDS | 15.0% |
| !! | ATATTCCTAAAACATATAAG+AGG | + | chr1_3:60002936-60002955 | None:intergenic | 20.0% |
| !!! | TTTTAGGAATATTAGTAAAG+AGG | - | chr1_3:60002944-60002963 | Msa0129940:CDS | 20.0% |
| !! | TTTATTTAGGTGATTTGAAA+TGG | - | chr1_3:60003033-60003052 | Msa0129940:CDS | 20.0% |
| !! | AACTATATATATGCAAAAAC+AGG | - | chr1_3:60003879-60003898 | Msa0129940:intron | 20.0% |
| !!! | TTTTTTTTCAAGATCATGAG+AGG | - | chr1_3:60002108-60002127 | Msa0129940:three_prime_UTR | 25.0% |
| ! | TTTGTTGAAGAAACTTCAAT+TGG | + | chr1_3:60002642-60002661 | None:intergenic | 25.0% |
| ! | TCATTGTTAACACAATCTAT+AGG | + | chr1_3:60002750-60002769 | None:intergenic | 25.0% |
| ! | TGTTGAGTGAATTAGTAAAA+AGG | - | chr1_3:60002784-60002803 | Msa0129940:CDS | 25.0% |
| ! | AAAAGAAACACTGTTATTGT+AGG | - | chr1_3:60002807-60002826 | Msa0129940:CDS | 25.0% |
| !!! | GGTAATGGAGATTAAAAAAT+TGG | - | chr1_3:60003121-60003140 | Msa0129940:CDS | 25.0% |
| ! | GAGATTAAAAAATTGGTTAG+TGG | - | chr1_3:60003128-60003147 | Msa0129940:CDS | 25.0% |
| !!! | TTATAGTGATTTTCAAGCTA+AGG | - | chr1_3:60003414-60003433 | Msa0129940:intron | 25.0% |
| !! | TTATTCAATGACTTGACTTT+TGG | - | chr1_3:60003451-60003470 | Msa0129940:intron | 25.0% |
| !! | TTCAGTGTGAAATTTTTGTA+CGG | - | chr1_3:60003831-60003850 | Msa0129940:intron | 25.0% |
| !! | TTTTCTTGTTCAGAAATTAC+AGG | + | chr1_3:60004131-60004150 | None:intergenic | 25.0% |
| ! | TGTAATTTCTGAACAAGAAA+AGG | - | chr1_3:60004130-60004149 | Msa0129940:CDS | 25.0% |
| !! | TATAATAACTCACACTCTTT+TGG | + | chr1_3:60004158-60004177 | None:intergenic | 25.0% |
| ! | TGAATCATTTCTTTATGTTG+TGG | + | chr1_3:60004404-60004423 | None:intergenic | 25.0% |
| ! | AAAATCATAAGCAAGAAACA+TGG | - | chr1_3:60004495-60004514 | Msa0129940:CDS | 25.0% |
| ! | TGTAACAACTTTATGACAAT+TGG | - | chr1_3:60004593-60004612 | Msa0129940:CDS | 25.0% |
| !! | TTTTCAGCTATAGTTATTAG+TGG | - | chr1_3:60005176-60005195 | Msa0129940:five_prime_UTR | 25.0% |
| ! | TTTCAGCTATAGTTATTAGT+GGG | - | chr1_3:60005177-60005196 | Msa0129940:five_prime_UTR | 25.0% |
| !!! | ATGCATGTATTTTTCAATCT+TGG | - | chr1_3:60005264-60005283 | Msa0129940:five_prime_UTR | 25.0% |
| !!! | ATGTATTTTTCAATCTTGGA+TGG | - | chr1_3:60005268-60005287 | Msa0129940:five_prime_UTR | 25.0% |
| GAATATTGAGGACCTAATAA+TGG | + | chr1_3:60002387-60002406 | None:intergenic | 30.0% | |
| GTTAACACAATCTATAGGTT+TGG | + | chr1_3:60002745-60002764 | None:intergenic | 30.0% | |
| TGTACATATCTTAACTCCAT+AGG | + | chr1_3:60002900-60002919 | None:intergenic | 30.0% | |
| ! | GTCTTCCTCTTATATGTTTT+AGG | - | chr1_3:60002928-60002947 | Msa0129940:CDS | 30.0% |
| GGAAGTTGAAAAGAAATTTG+TGG | - | chr1_3:60002965-60002984 | Msa0129940:CDS | 30.0% | |
| ! | AGAGGGGTTATTCTTTATTT+AGG | - | chr1_3:60003020-60003039 | Msa0129940:CDS | 30.0% |
| !! | TGAAATGGTTGTTTGAGTTT+TGG | - | chr1_3:60003048-60003067 | Msa0129940:CDS | 30.0% |
| CAAGTTACTGTGAACAAAAA+AGG | - | chr1_3:60003072-60003091 | Msa0129940:CDS | 30.0% | |
| CTATTGTTCTGTTGAACATA+TGG | - | chr1_3:60003100-60003119 | Msa0129940:CDS | 30.0% | |
| TTCTGTTGAACATATGGTAA+TGG | - | chr1_3:60003106-60003125 | Msa0129940:CDS | 30.0% | |
| AAAAAATTGGTTAGTGGAAG+TGG | - | chr1_3:60003134-60003153 | Msa0129940:CDS | 30.0% | |
| AGTAGTAGATTATGGCTTAT+GGG | - | chr1_3:60003161-60003180 | Msa0129940:CDS | 30.0% | |
| !!! | TTACAATTTTGAAGCCATGT+TGG | + | chr1_3:60003595-60003614 | None:intergenic | 30.0% |
| AACATGGCTTCAAAATTGTA+AGG | - | chr1_3:60003594-60003613 | Msa0129940:intron | 30.0% | |
| AATAGTCTCATACACATACT+TGG | - | chr1_3:60003657-60003676 | Msa0129940:CDS | 30.0% | |
| ATAGGAAAATGCAAGACTTA+AGG | - | chr1_3:60003944-60003963 | Msa0129940:intron | 30.0% | |
| !!! | GTTAGACTTTTTTTCAAGTG+AGG | + | chr1_3:60004084-60004103 | None:intergenic | 30.0% |
| AAATTACAGGCCAATTTAGT+TGG | + | chr1_3:60004118-60004137 | None:intergenic | 30.0% | |
| ! | TTATTATACACTGAAAGTGC+TGG | - | chr1_3:60004170-60004189 | Msa0129940:CDS | 30.0% |
| !! | TTTGACAAAAGATCTGGTTT+TGG | + | chr1_3:60004254-60004273 | None:intergenic | 30.0% |
| TTAGGATTTGACAAAAGATC+TGG | + | chr1_3:60004260-60004279 | None:intergenic | 30.0% | |
| TCATTCCTGATCTACAAAAA+AGG | + | chr1_3:60004445-60004464 | None:intergenic | 30.0% | |
| !!! | GAAACATGGATGTTTTTTCT+TGG | - | chr1_3:60004509-60004528 | Msa0129940:CDS | 30.0% |
| ! | TTTGGATTTTTCATCACTTG+AGG | + | chr1_3:60004654-60004673 | None:intergenic | 30.0% |
| CAAGTGATGAAAAATCCAAA+AGG | - | chr1_3:60004654-60004673 | Msa0129940:CDS | 30.0% | |
| AGTTGATCACTTTACTCAAA+AGG | - | chr1_3:60004778-60004797 | Msa0129940:CDS | 30.0% | |
| GTTGATCACTTTACTCAAAA+GGG | - | chr1_3:60004779-60004798 | Msa0129940:CDS | 30.0% | |
| ATCAAGAAAGCAATTGAATG+TGG | - | chr1_3:60004803-60004822 | Msa0129940:CDS | 30.0% | |
| TTCACTACTGAAAATGACAA+TGG | + | chr1_3:60004873-60004892 | None:intergenic | 30.0% | |
| AGCATTATCATGATCTTCAA+TGG | + | chr1_3:60005011-60005030 | None:intergenic | 30.0% | |
| CAAACAAGTAGAGCAAAAAA+AGG | + | chr1_3:60005155-60005174 | None:intergenic | 30.0% | |
| TTCAGCTATAGTTATTAGTG+GGG | - | chr1_3:60005178-60005197 | Msa0129940:five_prime_UTR | 30.0% | |
| ! | ATTTTGTGCCTTTCTTGTCA+GGG | + | chr1_3:60001979-60001998 | None:intergenic | 35.0% |
| ! | AATTTTGTGCCTTTCTTGTC+AGG | + | chr1_3:60001980-60001999 | None:intergenic | 35.0% |
| AGAAAACAAAGGCTACTAGT+TGG | + | chr1_3:60002050-60002069 | None:intergenic | 35.0% | |
| AGAGAGAGAGTAGAAAACAA+AGG | + | chr1_3:60002061-60002080 | None:intergenic | 35.0% | |
| !!! | TTTTTCAAGATCATGAGAGG+AGG | - | chr1_3:60002111-60002130 | Msa0129940:three_prime_UTR | 35.0% |
| CTCATAACTCTACTAACACT+TGG | + | chr1_3:60002561-60002580 | None:intergenic | 35.0% | |
| TGAGATAGGTAATGTTCCTA+TGG | - | chr1_3:60002881-60002900 | Msa0129940:CDS | 35.0% | |
| ! | AAGCCTTGTGAAAAGCTATA+TGG | - | chr1_3:60002995-60003014 | Msa0129940:CDS | 35.0% |
| ! | AGCCTTGTGAAAAGCTATAT+GGG | - | chr1_3:60002996-60003015 | Msa0129940:CDS | 35.0% |
| ! | TTCCCATATAGCTTTTCACA+AGG | + | chr1_3:60003001-60003020 | None:intergenic | 35.0% |
| TGAAAAGCTATATGGGAAGA+GGG | - | chr1_3:60003003-60003022 | Msa0129940:CDS | 35.0% | |
| GAGTAGTAGATTATGGCTTA+TGG | - | chr1_3:60003160-60003179 | Msa0129940:CDS | 35.0% | |
| GTAGTAGATTATGGCTTATG+GGG | - | chr1_3:60003162-60003181 | Msa0129940:CDS | 35.0% | |
| AAGCTCCCAAATAGTTTCTA+GGG | + | chr1_3:60003234-60003253 | None:intergenic | 35.0% | |
| ! | CATCCTTTTACAATTCCTGT+TGG | - | chr1_3:60003254-60003273 | Msa0129940:CDS | 35.0% |
| CAAAGTTCAAACTTAGGCTT+AGG | + | chr1_3:60003283-60003302 | None:intergenic | 35.0% | |
| ACCTGTCAAAGTTCAAACTT+AGG | + | chr1_3:60003289-60003308 | None:intergenic | 35.0% | |
| !! | TTGACTTTTGGAGATAAAGC+AGG | - | chr1_3:60003463-60003482 | Msa0129940:intron | 35.0% |
| TTAAGGATCTCTGCAAGAAA+TGG | - | chr1_3:60003961-60003980 | Msa0129940:CDS | 35.0% | |
| CTTGTTTGTCAAGAATCGAA+GGG | + | chr1_3:60004016-60004035 | None:intergenic | 35.0% | |
| ! | TCTTGTTTGTCAAGAATCGA+AGG | + | chr1_3:60004017-60004036 | None:intergenic | 35.0% |
| !! | GAAAATGAAGTTGGTGATGA+AGG | + | chr1_3:60004062-60004081 | None:intergenic | 35.0% |
| TCAAGTGAGGAAAATGAAGT+TGG | + | chr1_3:60004071-60004090 | None:intergenic | 35.0% | |
| TCCAACAAAGCCAACTAAAT+TGG | - | chr1_3:60004105-60004124 | Msa0129940:CDS | 35.0% | |
| ! | GATGATGATGATTGCTATGA+TGG | - | chr1_3:60004194-60004213 | Msa0129940:CDS | 35.0% |
| !!! | GGTTTTGGAACATTTCTATG+TGG | + | chr1_3:60004239-60004258 | None:intergenic | 35.0% |
| !!! | ACTGTCCTTTTTTGTAGATC+AGG | - | chr1_3:60004437-60004456 | Msa0129940:CDS | 35.0% |
| AGATCAGGAATGAGAAAAAG+AGG | - | chr1_3:60004452-60004471 | Msa0129940:CDS | 35.0% | |
| GATCAGGAATGAGAAAAAGA+GGG | - | chr1_3:60004453-60004472 | Msa0129940:CDS | 35.0% | |
| TGAGGAATCATCATTTCCTA+GGG | + | chr1_3:60004636-60004655 | None:intergenic | 35.0% | |
| TTGAGGAATCATCATTTCCT+AGG | + | chr1_3:60004637-60004656 | None:intergenic | 35.0% | |
| !! | ATCTCTTGGTCTTTTCCTTT+TGG | + | chr1_3:60004672-60004691 | None:intergenic | 35.0% |
| AAAAGACCAAGAGATGAGTT+GGG | - | chr1_3:60004677-60004696 | Msa0129940:CDS | 35.0% | |
| AGCACTTATTTGCAAAGGTT+TGG | - | chr1_3:60004701-60004720 | Msa0129940:CDS | 35.0% | |
| ! | GGAAGTATAACAATTCCTGA+TGG | - | chr1_3:60004824-60004843 | Msa0129940:CDS | 35.0% |
| ! | TTTTCAGCACATGATGATTG+TGG | + | chr1_3:60004920-60004939 | None:intergenic | 35.0% |
| TCATCATGTGCTGAAAACAA+AGG | - | chr1_3:60004923-60004942 | Msa0129940:CDS | 35.0% | |
| CATCATGTGCTGAAAACAAA+GGG | - | chr1_3:60004924-60004943 | Msa0129940:CDS | 35.0% | |
| ! | ACTTTGATGATCCTCTATCA+TGG | + | chr1_3:60004957-60004976 | None:intergenic | 35.0% |
| AAGTAGTCTAAACCTCTCTT+TGG | - | chr1_3:60004973-60004992 | Msa0129940:CDS | 35.0% | |
| CTATATTCAGATCCAAAGAG+AGG | + | chr1_3:60004988-60005007 | None:intergenic | 35.0% | |
| ! | GATCATGATAATGCTGACAT+TGG | - | chr1_3:60005016-60005035 | Msa0129940:CDS | 35.0% |
| ! | TTTTCAATCTTGGATGGAGA+TGG | - | chr1_3:60005274-60005293 | Msa0129940:five_prime_UTR | 35.0% |
| ! | CTTGTCAGGGAGGTAAATTT+TGG | + | chr1_3:60001966-60001985 | None:intergenic | 40.0% |
| ATTTACCTCCCTGACAAGAA+AGG | - | chr1_3:60001968-60001987 | Msa0129940:three_prime_UTR | 40.0% | |
| GGTACAATAAGAGCAAGATG+TGG | + | chr1_3:60002024-60002043 | None:intergenic | 40.0% | |
| ACAAAGGCTACTAGTTGGTT+TGG | + | chr1_3:60002045-60002064 | None:intergenic | 40.0% | |
| GTGAATCTAGCAACAAGAAG+AGG | - | chr1_3:60002195-60002214 | Msa0129940:CDS | 40.0% | |
| CAAGAGCTTTGCATTGAAGA+GGG | + | chr1_3:60002314-60002333 | None:intergenic | 40.0% | |
| TCAAGAGCTTTGCATTGAAG+AGG | + | chr1_3:60002315-60002334 | None:intergenic | 40.0% | |
| TCCACGCAAAGTCCATTATT+AGG | - | chr1_3:60002372-60002391 | Msa0129940:CDS | 40.0% | |
| !! | ACCTAATAATGGACTTTGCG+TGG | + | chr1_3:60002376-60002395 | None:intergenic | 40.0% |
| GAAGGAGTGGTTGAATATTG+AGG | + | chr1_3:60002399-60002418 | None:intergenic | 40.0% | |
| TCCTTCACTTTCCAATGCTT+TGG | - | chr1_3:60002413-60002432 | Msa0129940:CDS | 40.0% | |
| !! | ACCAAAGCATTGGAAAGTGA+AGG | + | chr1_3:60002417-60002436 | None:intergenic | 40.0% |
| AGTAGAGTTATGAGAGAAGC+TGG | - | chr1_3:60002567-60002586 | Msa0129940:CDS | 40.0% | |
| TAAGGCTAAGTTCTTTGGAC+TGG | + | chr1_3:60002689-60002708 | None:intergenic | 40.0% | |
| AGGCTTAAGGCTAAGTTCTT+TGG | + | chr1_3:60002694-60002713 | None:intergenic | 40.0% | |
| !! | AGAGAGTGTTTCTAATGCTG+AGG | - | chr1_3:60002830-60002849 | Msa0129940:CDS | 40.0% |
| !! | GAGAGTGTTTCTAATGCTGA+GGG | - | chr1_3:60002831-60002850 | Msa0129940:CDS | 40.0% |
| ! | TAGCTAAAGGAGTGATGGAA+AGG | - | chr1_3:60002856-60002875 | Msa0129940:CDS | 40.0% |
| ! | GTGATGGAAAGGTTTGAGAT+AGG | - | chr1_3:60002867-60002886 | Msa0129940:CDS | 40.0% |
| GTGAAAAGCTATATGGGAAG+AGG | - | chr1_3:60003002-60003021 | Msa0129940:CDS | 40.0% | |
| GAAAAGCTATATGGGAAGAG+GGG | - | chr1_3:60003004-60003023 | Msa0129940:CDS | 40.0% | |
| GTGGTGAGAGTAGTAGATTA+TGG | - | chr1_3:60003153-60003172 | Msa0129940:CDS | 40.0% | |
| ACCCTTCCCTAGAAACTATT+TGG | - | chr1_3:60003225-60003244 | Msa0129940:CDS | 40.0% | |
| ! | CCCAAATAGTTTCTAGGGAA+GGG | + | chr1_3:60003229-60003248 | None:intergenic | 40.0% |
| CCCTTCCCTAGAAACTATTT+GGG | - | chr1_3:60003226-60003245 | Msa0129940:CDS | 40.0% | |
| ! | TCCCAAATAGTTTCTAGGGA+AGG | + | chr1_3:60003230-60003249 | None:intergenic | 40.0% |
| GAAGCTCCCAAATAGTTTCT+AGG | + | chr1_3:60003235-60003254 | None:intergenic | 40.0% | |
| CTGCCAACAGGAATTGTAAA+AGG | + | chr1_3:60003260-60003279 | None:intergenic | 40.0% | |
| GCCTAAGTTTGAACTTTGAC+AGG | - | chr1_3:60003285-60003304 | Msa0129940:CDS | 40.0% | |
| TCAAGCTAAGGAGAGAAGTA+TGG | - | chr1_3:60003426-60003445 | Msa0129940:intron | 40.0% | |
| TTTGGAGATAAAGCAGGAGT+TGG | - | chr1_3:60003469-60003488 | Msa0129940:intron | 40.0% | |
| GGAAGAAAGAAGTTACACAG+TGG | - | chr1_3:60003615-60003634 | Msa0129940:CDS | 40.0% | |
| AAGTTACACAGTGGAAGATC+AGG | - | chr1_3:60003624-60003643 | Msa0129940:CDS | 40.0% | |
| !! | GCCAATTTAGTTGGCTTTGT+TGG | + | chr1_3:60004109-60004128 | None:intergenic | 40.0% |
| TCACTTGAAGAAGCTGAGTT+TGG | + | chr1_3:60004290-60004309 | None:intergenic | 40.0% | |
| ! | TTGTGGAAACTTGTTCTCCA+AGG | + | chr1_3:60004387-60004406 | None:intergenic | 40.0% |
| AGCCAGAGAGAATATCTCAA+AGG | - | chr1_3:60004544-60004563 | Msa0129940:CDS | 40.0% | |
| !! | CTCCTTTGAGATATTCTCTC+TGG | + | chr1_3:60004549-60004568 | None:intergenic | 40.0% |
| GAGCTAGCTAAAGTTGTCTT+TGG | - | chr1_3:60004566-60004585 | Msa0129940:CDS | 40.0% | |
| GAAAAGACCAAGAGATGAGT+TGG | - | chr1_3:60004676-60004695 | Msa0129940:CDS | 40.0% | |
| !! | TGGGAAGCACTTATTTGCAA+AGG | - | chr1_3:60004696-60004715 | Msa0129940:CDS | 40.0% |
| ! | TCCTCATAGAGTGTTCTTCA+TGG | - | chr1_3:60004742-60004761 | Msa0129940:CDS | 40.0% |
| TCCATGAAGAACACTCTATG+AGG | + | chr1_3:60004746-60004765 | None:intergenic | 40.0% | |
| ATGGCACTAGCAACATGAAG+AGG | + | chr1_3:60002237-60002256 | None:intergenic | 45.0% | |
| TCCTGTTGAAGTTGCAAGCA+TGG | + | chr1_3:60002256-60002275 | None:intergenic | 45.0% | |
| TTTGCGTGGAAGCTGGTAAA+CGG | + | chr1_3:60002362-60002381 | None:intergenic | 45.0% | |
| ! | AGCATTGGAAAGTGAAGGAG+TGG | + | chr1_3:60002412-60002431 | None:intergenic | 45.0% |
| GAAAGCTGCAACCAAAGCAT+TGG | + | chr1_3:60002427-60002446 | None:intergenic | 45.0% | |
| GGCTAAGAACTTGAGGCTTA+AGG | + | chr1_3:60002707-60002726 | None:intergenic | 45.0% | |
| AAGCCTCAAGTTCTTAGCCT+TGG | - | chr1_3:60002708-60002727 | Msa0129940:CDS | 45.0% | |
| !! | GTTTGGTGTATGAACCACCA+AGG | + | chr1_3:60002728-60002747 | None:intergenic | 45.0% |
| AATGCTGAGGGAGTAGCTAA+AGG | - | chr1_3:60002843-60002862 | Msa0129940:CDS | 45.0% | |
| ! | GTCGACAGCGTAAAGCATTT+AGG | + | chr1_3:60003725-60003744 | None:intergenic | 45.0% |
| GCTGAGTTTGGACTTGAGTT+AGG | + | chr1_3:60004278-60004297 | None:intergenic | 45.0% | |
| AGCTTCTTCAAGTGAAGCAG+TGG | - | chr1_3:60004295-60004314 | Msa0129940:CDS | 45.0% | |
| TCTTCAAGTGAAGCAGTGGA+TGG | - | chr1_3:60004299-60004318 | Msa0129940:CDS | 45.0% | |
| CAAGATTCTCTGTGATGCCT+TGG | - | chr1_3:60004367-60004386 | Msa0129940:CDS | 45.0% | |
| ATGAGCACTTTCTCTTCCCT+AGG | - | chr1_3:60004617-60004636 | Msa0129940:CDS | 45.0% | |
| AGTGGAACAGATTCACCATC+AGG | + | chr1_3:60004842-60004861 | None:intergenic | 45.0% | |
| TGGTGAATCTGTTCCACTCA+AGG | - | chr1_3:60004844-60004863 | Msa0129940:CDS | 45.0% | |
| ATGACAATGGCATCCTTGAG+TGG | + | chr1_3:60004860-60004879 | None:intergenic | 45.0% | |
| AGGGAAAGAGACCATGATAG+AGG | - | chr1_3:60004943-60004962 | Msa0129940:CDS | 45.0% | |
| TTGTGCCTTTCTTGTCAGGG+AGG | + | chr1_3:60001976-60001995 | None:intergenic | 50.0% | |
| GCCATGCTTGCAACTTCAAC+AGG | - | chr1_3:60002252-60002271 | Msa0129940:CDS | 50.0% | |
| ! | AATGGACTTTGCGTGGAAGC+TGG | + | chr1_3:60002369-60002388 | None:intergenic | 50.0% |
| TGCAGCTTTCAAACGTGCTC+AGG | - | chr1_3:60002437-60002456 | Msa0129940:CDS | 50.0% | |
| CCACCAAGGCTAAGAACTTG+AGG | + | chr1_3:60002714-60002733 | None:intergenic | 50.0% | |
| !! | CCTCAAGTTCTTAGCCTTGG+TGG | - | chr1_3:60002711-60002730 | Msa0129940:CDS | 50.0% |
| GGGAGTAGCTAAAGGAGTGA+TGG | - | chr1_3:60002851-60002870 | Msa0129940:CDS | 50.0% | |
| GCAGTTCAAGCTTGCCAACA+TGG | - | chr1_3:60003578-60003597 | Msa0129940:intron | 50.0% | |
| GTGCTTCCCAACTCATCTCT+TGG | + | chr1_3:60004686-60004705 | None:intergenic | 50.0% | |
| TCTCGATCGTTCCGCGTCTT+TGG | + | chr1_3:60002467-60002486 | None:intergenic | 55.0% | |
| CTTAGGCTTAGGCTGCCAAC+AGG | + | chr1_3:60003272-60003291 | None:intergenic | 55.0% | |
| GCTCAGGCTCACCAAAGACG+CGG | - | chr1_3:60002453-60002472 | Msa0129940:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 60001923 | 60005337 | 60001923 | ID=Msa0129940;Name=Msa0129940 |
| chr1_3 | mRNA | 60001923 | 60005337 | 60001923 | ID=Msa0129940-mRNA-1;Parent=Msa0129940;Name=Msa0129940-mRNA-1;_AED=0.00;_eAED=0.00;_QI=200|1|1|1|1|1|3|256|847 |
| chr1_3 | exon | 60001923 | 60003312 | 60001923 | ID=Msa0129940-mRNA-1:exon:19696;Parent=Msa0129940-mRNA-1 |
| chr1_3 | exon | 60003615 | 60003840 | 60003615 | ID=Msa0129940-mRNA-1:exon:19695;Parent=Msa0129940-mRNA-1 |
| chr1_3 | exon | 60003954 | 60005337 | 60003954 | ID=Msa0129940-mRNA-1:exon:19694;Parent=Msa0129940-mRNA-1 |
| chr1_3 | five_prime_UTR | 60005138 | 60005337 | 60005138 | ID=Msa0129940-mRNA-1:five_prime_utr;Parent=Msa0129940-mRNA-1 |
| chr1_3 | CDS | 60003954 | 60005137 | 60003954 | ID=Msa0129940-mRNA-1:cds;Parent=Msa0129940-mRNA-1 |
| chr1_3 | CDS | 60003615 | 60003840 | 60003615 | ID=Msa0129940-mRNA-1:cds;Parent=Msa0129940-mRNA-1 |
| chr1_3 | CDS | 60002179 | 60003312 | 60002179 | ID=Msa0129940-mRNA-1:cds;Parent=Msa0129940-mRNA-1 |
| chr1_3 | three_prime_UTR | 60001923 | 60002178 | 60001923 | ID=Msa0129940-mRNA-1:three_prime_utr;Parent=Msa0129940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
