Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263490 | XP_003610465.2 | 97.305 | 334 | 9 | 0 | 1 | 334 | 1 | 334 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263490 | A0A0C3X8T8 | 97.305 | 334 | 9 | 0 | 1 | 334 | 1 | 334 | 0.0 | 681 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1263490 | 0.838394 | 2.952429e-57 | -8.615850e-47 |
| Msa0001940 | Msa1263490 | 0.817906 | 2.585812e-52 | -8.615850e-47 |
| Msa0002580 | Msa1263490 | 0.809256 | 2.069981e-50 | -8.615850e-47 |
| Msa0005890 | Msa1263490 | 0.834335 | 3.181090e-56 | -8.615850e-47 |
| Msa0017950 | Msa1263490 | 0.812476 | 4.159642e-51 | -8.615850e-47 |
| Msa0027820 | Msa1263490 | 0.825444 | 4.671128e-54 | -8.615850e-47 |
| Msa0034810 | Msa1263490 | 0.815072 | 1.114962e-51 | -8.615850e-47 |
| Msa0050660 | Msa1263490 | 0.801248 | 9.850082e-49 | -8.615850e-47 |
| Msa0050700 | Msa1263490 | 0.803561 | 3.286540e-49 | -8.615850e-47 |
| Msa0050790 | Msa1263490 | 0.814079 | 1.849376e-51 | -8.615850e-47 |
| Msa0054690 | Msa1263490 | 0.827780 | 1.294820e-54 | -8.615850e-47 |
| Msa0071880 | Msa1263490 | 0.816474 | 5.429502e-52 | -8.615850e-47 |
| Msa0081520 | Msa1263490 | 0.834955 | 2.221499e-56 | -8.615850e-47 |
| Msa0094780 | Msa1263490 | 0.844973 | 5.423478e-59 | -8.615850e-47 |
| Msa0097770 | Msa1263490 | 0.806561 | 7.747888e-50 | -8.615850e-47 |
| Msa0611210 | Msa1263490 | 0.812426 | 4.265116e-51 | -8.615850e-47 |
| Msa0626450 | Msa1263490 | 0.843315 | 1.511388e-58 | -8.615850e-47 |
| Msa0626490 | Msa1263490 | 0.838069 | 3.578886e-57 | -8.615850e-47 |
| Msa0644410 | Msa1263490 | 0.843398 | 1.436218e-58 | -8.615850e-47 |
| Msa0651550 | Msa1263490 | 0.820538 | 6.505385e-53 | -8.615850e-47 |
| Msa0657440 | Msa1263490 | 0.808470 | 3.049146e-50 | -8.615850e-47 |
| Msa0661150 | Msa1263490 | 0.803880 | 2.822009e-49 | -8.615850e-47 |
| Msa0664600 | Msa1263490 | 0.838624 | 2.575443e-57 | -8.615850e-47 |
| Msa0675330 | Msa1263490 | 0.809142 | 2.189963e-50 | -8.615850e-47 |
| Msa0683570 | Msa1263490 | 0.804104 | 2.535454e-49 | -8.615850e-47 |
| Msa0693890 | Msa1263490 | 0.802407 | 5.691863e-49 | -8.615850e-47 |
| Msa0701700 | Msa1263490 | 0.810167 | 1.318664e-50 | -8.615850e-47 |
| Msa0715060 | Msa1263490 | 0.802770 | 4.791027e-49 | -8.615850e-47 |
| Msa0721080 | Msa1263490 | 0.813517 | 2.459562e-51 | -8.615850e-47 |
| Msa0724910 | Msa1263490 | 0.808985 | 2.365923e-50 | -8.615850e-47 |
| Msa0738700 | Msa1263490 | 0.802007 | 6.880271e-49 | -8.615850e-47 |
| Msa0741220 | Msa1263490 | 0.846339 | 2.311253e-59 | -8.615850e-47 |
| Msa0742740 | Msa1263490 | 0.824714 | 6.950240e-54 | -8.615850e-47 |
| Msa0756490 | Msa1263490 | 0.800034 | 1.741828e-48 | -8.615850e-47 |
| Msa0765240 | Msa1263490 | 0.829399 | 5.260184e-55 | -8.615850e-47 |
| Msa0769180 | Msa1263490 | 0.801139 | 1.036868e-48 | -8.615850e-47 |
| Msa0778590 | Msa1263490 | 0.817487 | 3.215215e-52 | -8.615850e-47 |
| Msa0779870 | Msa1263490 | 0.831243 | 1.864329e-55 | -8.615850e-47 |
| Msa0780270 | Msa1263490 | 0.849959 | 2.313430e-60 | -8.615850e-47 |
| Msa0783530 | Msa1263490 | 0.821948 | 3.076985e-53 | -8.615850e-47 |
| Msa0795870 | Msa1263490 | 0.851167 | 1.058711e-60 | -8.615850e-47 |
| Msa0815960 | Msa1263490 | 0.818665 | 1.741086e-52 | -8.615850e-47 |
| Msa0819170 | Msa1263490 | 0.819799 | 9.606288e-53 | -8.615850e-47 |
| Msa0821780 | Msa1263490 | 0.805414 | 1.350401e-49 | -8.615850e-47 |
| Msa0823820 | Msa1263490 | 0.835984 | 1.220554e-56 | -8.615850e-47 |
| Msa0824450 | Msa1263490 | 0.800499 | 1.400662e-48 | -8.615850e-47 |
| Msa0829330 | Msa1263490 | 0.807552 | 4.779638e-50 | -8.615850e-47 |
| Msa0833220 | Msa1263490 | 0.805468 | 1.315414e-49 | -8.615850e-47 |
| Msa0833650 | Msa1263490 | 0.847889 | 8.689521e-60 | -8.615850e-47 |
| Msa0835490 | Msa1263490 | 0.808623 | 2.827228e-50 | -8.615850e-47 |
| Msa0136650 | Msa1263490 | 0.823768 | 1.159701e-53 | -8.615850e-47 |
| Msa0173890 | Msa1263490 | 0.808010 | 3.820864e-50 | -8.615850e-47 |
| Msa0174450 | Msa1263490 | 0.837641 | 4.609470e-57 | -8.615850e-47 |
| Msa0190570 | Msa1263490 | 0.806037 | 9.993625e-50 | -8.615850e-47 |
| Msa0191020 | Msa1263490 | 0.801556 | 8.516035e-49 | -8.615850e-47 |
| Msa0219880 | Msa1263490 | 0.801829 | 7.486519e-49 | -8.615850e-47 |
| Msa0221000 | Msa1263490 | 0.832733 | 7.986646e-56 | -8.615850e-47 |
| Msa0225100 | Msa1263490 | 0.861740 | 8.298646e-64 | -8.615850e-47 |
| Msa0225860 | Msa1263490 | 0.841008 | 6.163110e-58 | -8.615850e-47 |
| Msa0233320 | Msa1263490 | 0.801209 | 1.002926e-48 | -8.615850e-47 |
| Msa1225860 | Msa1263490 | -0.820309 | 7.342827e-53 | -8.615850e-47 |
| Msa1228200 | Msa1263490 | 0.829995 | 3.766885e-55 | -8.615850e-47 |
| Msa1252200 | Msa1263490 | 0.803646 | 3.156190e-49 | -8.615850e-47 |
| Msa1252780 | Msa1263490 | 0.800462 | 1.425375e-48 | -8.615850e-47 |
| Msa1257300 | Msa1263490 | 0.802028 | 6.813898e-49 | -8.615850e-47 |
| Msa1263490 | Msa1265650 | 0.810344 | 1.207525e-50 | -8.615850e-47 |
| Msa1263490 | Msa1267770 | 0.824090 | 9.742443e-54 | -8.615850e-47 |
| Msa1263490 | Msa1277220 | 0.828315 | 9.626744e-55 | -8.615850e-47 |
| Msa1263490 | Msa1292590 | 0.833152 | 6.285510e-56 | -8.615850e-47 |
| Msa1263490 | Msa1297230 | 0.836174 | 1.092355e-56 | -8.615850e-47 |
| Msa1263490 | Msa1303560 | 0.825881 | 3.680978e-54 | -8.615850e-47 |
| Msa1263490 | Msa1303650 | 0.820242 | 7.608628e-53 | -8.615850e-47 |
| Msa1263490 | Msa1314650 | 0.807595 | 4.680699e-50 | -8.615850e-47 |
| Msa1263490 | Msa1315590 | 0.829796 | 4.212700e-55 | -8.615850e-47 |
| Msa1263490 | Msa1328710 | 0.803807 | 2.923253e-49 | -8.615850e-47 |
| Msa1263490 | Msa1330420 | 0.807614 | 4.638146e-50 | -8.615850e-47 |
| Msa1263490 | Msa1343170 | 0.805686 | 1.183976e-49 | -8.615850e-47 |
| Msa1263490 | Msa1343180 | 0.807202 | 5.672855e-50 | -8.615850e-47 |
| Msa1263490 | Msa1343430 | 0.841283 | 5.220376e-58 | -8.615850e-47 |
| Msa1263490 | Msa1346560 | 0.814364 | 1.599445e-51 | -8.615850e-47 |
| Msa1263490 | Msa1348090 | 0.806589 | 7.642472e-50 | -8.615850e-47 |
| Msa1263490 | Msa1356830 | 0.840008 | 1.126290e-57 | -8.615850e-47 |
| Msa1263490 | Msa1359690 | 0.818842 | 1.587103e-52 | -8.615850e-47 |
| Msa1263490 | Msa1372040 | 0.803160 | 3.980749e-49 | -8.615850e-47 |
| Msa1263490 | Msa1387620 | 0.956117 | 6.265768e-114 | -8.615850e-47 |
| Msa1263490 | Msa1397400 | 0.821849 | 3.243639e-53 | -8.615850e-47 |
| Msa1263490 | Msa1405460 | 0.804983 | 1.662003e-49 | -8.615850e-47 |
| Msa1263490 | Msa1415540 | 0.805339 | 1.400143e-49 | -8.615850e-47 |
| Msa1263490 | Msa1432500 | 0.813362 | 2.659264e-51 | -8.615850e-47 |
| Msa1263490 | Msa1433810 | 0.835458 | 1.658188e-56 | -8.615850e-47 |
| Msa1263490 | Msa1437940 | 0.811154 | 8.067574e-51 | -8.615850e-47 |
| Msa1263490 | Msa1440630 | 0.814129 | 1.802610e-51 | -8.615850e-47 |
| Msa1263490 | Msa1440960 | 0.837981 | 3.771683e-57 | -8.615850e-47 |
| Msa1263490 | Msa1449480 | 0.939945 | 5.403211e-100 | -8.615850e-47 |
| Msa0369790 | Msa1263490 | 0.845234 | 4.612760e-59 | -8.615850e-47 |
| Msa0378720 | Msa1263490 | 0.830487 | 2.856077e-55 | -8.615850e-47 |
| Msa0380620 | Msa1263490 | 0.828978 | 6.656619e-55 | -8.615850e-47 |
| Msa0425170 | Msa1263490 | 0.802828 | 4.661199e-49 | -8.615850e-47 |
| Msa0428370 | Msa1263490 | 0.835627 | 1.503531e-56 | -8.615850e-47 |
| Msa0430260 | Msa1263490 | 0.836600 | 8.509916e-57 | -8.615850e-47 |
| Msa0436910 | Msa1263490 | 0.810305 | 1.231491e-50 | -8.615850e-47 |
| Msa0440440 | Msa1263490 | 0.816677 | 4.888912e-52 | -8.615850e-47 |
| Msa0464000 | Msa1263490 | 0.841510 | 4.547456e-58 | -8.615850e-47 |
| Msa0465400 | Msa1263490 | 0.803210 | 3.887116e-49 | -8.615850e-47 |
| Msa0472950 | Msa1263490 | 0.810323 | 1.220621e-50 | -8.615850e-47 |
| Msa0474730 | Msa1263490 | 0.832383 | 9.756254e-56 | -8.615850e-47 |
| Msa1019430 | Msa1263490 | 0.811260 | 7.650428e-51 | -8.615850e-47 |
| Msa1019470 | Msa1263490 | 0.831726 | 1.417310e-55 | -8.615850e-47 |
| Msa1020510 | Msa1263490 | 0.818179 | 2.243451e-52 | -8.615850e-47 |
| Msa1023500 | Msa1263490 | 0.809700 | 1.661803e-50 | -8.615850e-47 |
| Msa1028280 | Msa1263490 | 0.806621 | 7.525852e-50 | -8.615850e-47 |
| Msa1031930 | Msa1263490 | 0.809567 | 1.775692e-50 | -8.615850e-47 |
| Msa1035960 | Msa1263490 | 0.805763 | 1.140721e-49 | -8.615850e-47 |
| Msa1042160 | Msa1263490 | 0.817710 | 2.864147e-52 | -8.615850e-47 |
| Msa1042190 | Msa1263490 | 0.813041 | 3.129063e-51 | -8.615850e-47 |
| Msa1043370 | Msa1263490 | 0.800463 | 1.424299e-48 | -8.615850e-47 |
| Msa1072940 | Msa1263490 | 0.822238 | 2.636611e-53 | -8.615850e-47 |
| Msa1101090 | Msa1263490 | 0.800369 | 1.488331e-48 | -8.615850e-47 |
| Msa0242590 | Msa1263490 | 0.803356 | 3.624922e-49 | -8.615850e-47 |
| Msa0244640 | Msa1263490 | 0.838921 | 2.157552e-57 | -8.615850e-47 |
| Msa0260510 | Msa1263490 | 0.807164 | 5.776834e-50 | -8.615850e-47 |
| Msa0261340 | Msa1263490 | 0.804472 | 2.125210e-49 | -8.615850e-47 |
| Msa0265850 | Msa1263490 | 0.839203 | 1.823271e-57 | -8.615850e-47 |
| Msa0266180 | Msa1263490 | 0.841130 | 5.725167e-58 | -8.615850e-47 |
| Msa0266350 | Msa1263490 | 0.805321 | 1.412162e-49 | -8.615850e-47 |
| Msa0271880 | Msa1263490 | 0.802373 | 5.786662e-49 | -8.615850e-47 |
| Msa0274980 | Msa1263490 | 0.800201 | 1.610488e-48 | -8.615850e-47 |
| Msa0283330 | Msa1263490 | 0.810483 | 1.127415e-50 | -8.615850e-47 |
| Msa0287740 | Msa1263490 | 0.844176 | 8.892216e-59 | -8.615850e-47 |
| Msa0297790 | Msa1263490 | 0.807507 | 4.887919e-50 | -8.615850e-47 |
| Msa0298470 | Msa1263490 | 0.813310 | 2.731081e-51 | -8.615850e-47 |
| Msa0300270 | Msa1263490 | 0.838024 | 3.675858e-57 | -8.615850e-47 |
| Msa0300320 | Msa1263490 | 0.831344 | 1.760849e-55 | -8.615850e-47 |
| Msa0307270 | Msa1263490 | 0.828020 | 1.133874e-54 | -8.615850e-47 |
| Msa0310850 | Msa1263490 | 0.803144 | 4.010953e-49 | -8.615850e-47 |
| Msa0321620 | Msa1263490 | 0.818705 | 1.704687e-52 | -8.615850e-47 |
| Msa0330380 | Msa1263490 | 0.816626 | 5.017807e-52 | -8.615850e-47 |
| Msa0337700 | Msa1263490 | 0.845347 | 4.297298e-59 | -8.615850e-47 |
| Msa0340500 | Msa1263490 | 0.818710 | 1.700625e-52 | -8.615850e-47 |
| Msa0341690 | Msa1263490 | 0.812558 | 3.991820e-51 | -8.615850e-47 |
| Msa0363200 | Msa1263490 | 0.814695 | 1.351515e-51 | -8.615850e-47 |
| Msa1113800 | Msa1263490 | 0.810499 | 1.118221e-50 | -8.615850e-47 |
| Msa1132840 | Msa1263490 | 0.852190 | 5.432440e-61 | -8.615850e-47 |
| Msa1140210 | Msa1263490 | 0.813016 | 3.168398e-51 | -8.615850e-47 |
| Msa1145810 | Msa1263490 | 0.802592 | 5.215509e-49 | -8.615850e-47 |
| Msa1155170 | Msa1263490 | -0.831916 | 1.272362e-55 | -8.615850e-47 |
| Msa1160500 | Msa1263490 | 0.819591 | 1.071566e-52 | -8.615850e-47 |
| Msa1160920 | Msa1263490 | 0.831216 | 1.892590e-55 | -8.615850e-47 |
| Msa1161680 | Msa1263490 | 0.803663 | 3.131488e-49 | -8.615850e-47 |
| Msa1186020 | Msa1263490 | 0.821747 | 3.425658e-53 | -8.615850e-47 |
| Msa1199570 | Msa1263490 | 0.807088 | 5.995726e-50 | -8.615850e-47 |
| Msa1200890 | Msa1263490 | 0.812230 | 4.707876e-51 | -8.615850e-47 |
| Msa1205280 | Msa1263490 | 0.803254 | 3.805276e-49 | -8.615850e-47 |
| Msa1208430 | Msa1263490 | 0.803319 | 3.689944e-49 | -8.615850e-47 |
| Msa1208950 | Msa1263490 | 0.814870 | 1.235952e-51 | -8.615850e-47 |
| Msa1223570 | Msa1263490 | 0.951938 | 7.077687e-110 | -8.615850e-47 |
| Msa0500380 | Msa1263490 | 0.808470 | 3.048775e-50 | -8.615850e-47 |
| Msa0509550 | Msa1263490 | 0.842503 | 2.485520e-58 | -8.615850e-47 |
| Msa0528570 | Msa1263490 | 0.824595 | 7.412127e-54 | -8.615850e-47 |
| Msa0529030 | Msa1263490 | 0.809245 | 2.081137e-50 | -8.615850e-47 |
| Msa0530780 | Msa1263490 | 0.804085 | 2.558384e-49 | -8.615850e-47 |
| Msa0534720 | Msa1263490 | 0.812301 | 4.542538e-51 | -8.615850e-47 |
| Msa0546500 | Msa1263490 | 0.817239 | 3.655845e-52 | -8.615850e-47 |
| Msa0548470 | Msa1263490 | 0.840326 | 9.301400e-58 | -8.615850e-47 |
| Msa0557460 | Msa1263490 | 0.841067 | 5.947819e-58 | -8.615850e-47 |
| Msa0580370 | Msa1263490 | 0.856891 | 2.367864e-62 | -8.615850e-47 |
| Msa0581470 | Msa1263490 | 0.818686 | 1.721917e-52 | -8.615850e-47 |
| Msa0583360 | Msa1263490 | -0.820789 | 5.698307e-53 | -8.615850e-47 |
| Msa0585020 | Msa1263490 | 0.800924 | 1.147224e-48 | -8.615850e-47 |
| Msa0590830 | Msa1263490 | 0.825345 | 4.930611e-54 | -8.615850e-47 |
| Msa0597270 | Msa1263490 | 0.825839 | 3.765424e-54 | -8.615850e-47 |
| Msa0597790 | Msa1263490 | 0.812126 | 4.960423e-51 | -8.615850e-47 |
| Msa0861510 | Msa1263490 | 0.818774 | 1.644756e-52 | -8.615850e-47 |
| Msa0861530 | Msa1263490 | 0.800000 | 1.769368e-48 | -8.615850e-47 |
| Msa0861600 | Msa1263490 | 0.823763 | 1.162872e-53 | -8.615850e-47 |
| Msa0861850 | Msa1263490 | 0.839298 | 1.723356e-57 | -8.615850e-47 |
| Msa0863010 | Msa1263490 | 0.838762 | 2.371159e-57 | -8.615850e-47 |
| Msa0866520 | Msa1263490 | 0.837332 | 5.531792e-57 | -8.615850e-47 |
| Msa0967870 | Msa1263490 | 0.827330 | 1.660864e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263490 | MtrunA17_Chr4g0075211 | 97.305 | 334 | 9 | 0 | 1 | 334 | 1 | 334 | 0.0 | 681 |
| Msa1263490 | MtrunA17_Chr2g0288891 | 78.033 | 305 | 65 | 2 | 31 | 334 | 17 | 320 | 1.13e-176 | 492 |
| Msa1263490 | MtrunA17_Chr4g0069121 | 33.750 | 240 | 133 | 12 | 38 | 269 | 34 | 255 | 1.02e-28 | 112 |
| Msa1263490 | MtrunA17_Chr8g0381971 | 28.223 | 287 | 159 | 12 | 17 | 283 | 10 | 269 | 3.53e-24 | 100 |
| Msa1263490 | MtrunA17_Chr5g0415341 | 27.458 | 295 | 178 | 12 | 24 | 298 | 13 | 291 | 4.69e-20 | 89.0 |
| Msa1263490 | MtrunA17_Chr4g0058901 | 25.161 | 310 | 192 | 12 | 15 | 301 | 13 | 305 | 1.62e-16 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263490 | AT1G11915.1 | 65.123 | 324 | 107 | 6 | 15 | 334 | 8 | 329 | 7.53e-136 | 389 |
| Msa1263490 | AT3G17350.1 | 31.873 | 251 | 144 | 11 | 33 | 271 | 26 | 261 | 1.20e-23 | 99.4 |
| Msa1263490 | AT3G17350.2 | 31.873 | 251 | 144 | 11 | 33 | 271 | 26 | 261 | 1.97e-23 | 98.2 |
| Msa1263490 | AT5G50290.1 | 27.143 | 280 | 171 | 10 | 16 | 277 | 3 | 267 | 1.41e-18 | 85.1 |
| Msa1263490 | AT1G10380.1 | 30.952 | 252 | 151 | 10 | 38 | 276 | 29 | 270 | 2.71e-18 | 84.3 |
| Msa1263490 | AT1G10380.2 | 30.952 | 252 | 151 | 10 | 38 | 276 | 29 | 270 | 3.03e-18 | 84.3 |
Find 67 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTTATTTATACAATTA+TGG | 0.120009 | 8_2:-66689414 | Msa1263490:three_prime_UTR |
| GTTACTGCTATTTCAGCTTT+TGG | 0.228291 | 8_2:-66689603 | Msa1263490:CDS |
| TTGGAATTGGAGGTGGTATT+TGG | 0.228294 | 8_2:-66689575 | Msa1263490:CDS |
| CAAGTTATGCTAGTGTTTAT+TGG | 0.239276 | 8_2:-66690312 | Msa1263490:CDS |
| TATGATCAAGTTCCTCAATA+TGG | 0.240179 | 8_2:-66690265 | Msa1263490:CDS |
| CTTTGAACTCCACATGTTAC+TGG | 0.265726 | 8_2:+66689525 | None:intergenic |
| CTCAAAGATTCAGTAGCTTT+AGG | 0.294315 | 8_2:+66690355 | None:intergenic |
| CAACCATCATCAATGGAAAA+AGG | 0.298240 | 8_2:+66690775 | None:intergenic |
| GAAAGAATGAATCTGTAATA+TGG | 0.324413 | 8_2:+66690745 | None:intergenic |
| TTATGGGGCCTCTCTTACTC+AGG | 0.325772 | 8_2:-66689397 | Msa1263490:three_prime_UTR |
| TTATTTATTTATACAATTAT+GGG | 0.332618 | 8_2:-66689413 | Msa1263490:three_prime_UTR |
| ACAAGTTCCACCACCACCTT+TGG | 0.367403 | 8_2:+66690183 | None:intergenic |
| TGTTCACAAAACACAGGCTT+TGG | 0.373458 | 8_2:+66690484 | None:intergenic |
| CAAGATGAATCACAGTGTTC+AGG | 0.400798 | 8_2:+66690457 | None:intergenic |
| GTGCTTGTGTCTAAACTAAA+TGG | 0.403773 | 8_2:+66690577 | None:intergenic |
| AGGAATGTCCATGTAATTGC+AGG | 0.403998 | 8_2:-66689754 | Msa1263490:intron |
| ATTATTGATAGTAATAAGAT+TGG | 0.411041 | 8_2:+66690883 | None:intergenic |
| CTAAAGCTACTGAATCTTTG+AGG | 0.411355 | 8_2:-66690354 | Msa1263490:CDS |
| ATGATCAAGTTCCTCAATAT+GGG | 0.412810 | 8_2:-66690264 | Msa1263490:CDS |
| CTTGAACTAAGAACACCTTC+TGG | 0.415837 | 8_2:-66690703 | Msa1263490:CDS |
| TTCAATCACCTGCAATTACA+TGG | 0.419145 | 8_2:+66689746 | None:intergenic |
| TGAAGACACCGCGTCGTCAC+TGG | 0.426939 | 8_2:+66690220 | None:intergenic |
| GAGTTTCTTGTGTTTATGTA+AGG | 0.427897 | 8_2:-66690140 | Msa1263490:CDS |
| ATGAACAGGTACTAGGTTGA+TGG | 0.445026 | 8_2:+66690965 | None:intergenic |
| TATTGAGGAACTTGATCATA+AGG | 0.446946 | 8_2:+66690268 | None:intergenic |
| AATAAACACAATAGCTCAAG+TGG | 0.451741 | 8_2:+66689431 | None:intergenic |
| TTTGGAGCACTTGGAATTGG+AGG | 0.470180 | 8_2:-66689585 | Msa1263490:CDS |
| TCTTCACAGTTCCACATGAA+TGG | 0.472468 | 8_2:+66690625 | None:intergenic |
| AATTTCACTACTCATTGTAA+TGG | 0.476094 | 8_2:-66690112 | Msa1263490:intron |
| ATATAGCTAACATTATGAAT+AGG | 0.481905 | 8_2:+66690673 | None:intergenic |
| TCTAAACTAAATGGTCTTGT+TGG | 0.485018 | 8_2:+66690586 | None:intergenic |
| GACGCGGTGTCTTCAATGTC+AGG | 0.485220 | 8_2:-66690212 | Msa1263490:CDS |
| GAGTTCAAAGCAATGAGAAC+AGG | 0.485646 | 8_2:-66689512 | Msa1263490:CDS |
| AGTGTTTATTGGAGAAATGT+TGG | 0.491654 | 8_2:-66690301 | Msa1263490:CDS |
| TTCTTGTGTTTATGTAAGGA+AGG | 0.498390 | 8_2:-66690136 | Msa1263490:CDS |
| GATCAATCCAAAGGTGGTGG+TGG | 0.501256 | 8_2:-66690190 | Msa1263490:CDS |
| TTAGAGATGAATGCATGAAC+AGG | 0.503392 | 8_2:+66690951 | None:intergenic |
| ATGATAATGCAAGGCACAGT+AGG | 0.505376 | 8_2:-66689774 | Msa1263490:CDS |
| TGAATGCATGAACAGGTACT+AGG | 0.510280 | 8_2:+66690958 | None:intergenic |
| AAAAGGATATTGGATTGGAA+TGG | 0.522600 | 8_2:+66690792 | None:intergenic |
| GGAGCACTTGGAATTGGAGG+TGG | 0.523403 | 8_2:-66689582 | Msa1263490:CDS |
| TGGGCTAAGAAAGTAACAAA+AGG | 0.540969 | 8_2:+66689451 | None:intergenic |
| ACTTCCACAACCATCATCAA+TGG | 0.544706 | 8_2:+66690768 | None:intergenic |
| ACATGAAGTTCTACAAAGGA+TGG | 0.551498 | 8_2:+66690819 | None:intergenic |
| TATTTATTTATACAATTATG+GGG | 0.552961 | 8_2:-66689412 | Msa1263490:three_prime_UTR |
| TATGGGGCCTCTCTTACTCA+GGG | 0.553640 | 8_2:-66689396 | Msa1263490:three_prime_UTR |
| TTTCATAAGCTATCCTGAAG+AGG | 0.567373 | 8_2:+66689249 | None:intergenic |
| ATCCTTTGTAGAACTTCATG+TGG | 0.569230 | 8_2:-66690817 | Msa1263490:CDS |
| AAAGGTGGTGGTGGAACTTG+TGG | 0.581771 | 8_2:-66690181 | Msa1263490:CDS |
| CAGGATCAATCCAAAGGTGG+TGG | 0.583668 | 8_2:-66690193 | Msa1263490:CDS |
| TCAACTCTAATCCCATATTG+AGG | 0.585217 | 8_2:+66690253 | None:intergenic |
| GGAAATTGTTCACAAAACAC+AGG | 0.597733 | 8_2:+66690478 | None:intergenic |
| TAGTCACCGATCCATTCATG+TGG | 0.610507 | 8_2:-66690636 | Msa1263490:CDS |
| ACAGTTCCACATGAATGGAT+CGG | 0.611522 | 8_2:+66690630 | None:intergenic |
| TGGGGCCTCTCTTACTCAGG+GGG | 0.613293 | 8_2:-66689394 | Msa1263490:three_prime_UTR |
| TTGATATTCCAGTGACGACG+CGG | 0.620201 | 8_2:-66690228 | Msa1263490:CDS |
| TGGCAGATCATGATAATGCA+AGG | 0.621886 | 8_2:-66689783 | Msa1263490:intron |
| TGAATAGGATATCTTCCAGA+AGG | 0.622548 | 8_2:+66690688 | None:intergenic |
| GGAACTTGATCATAAGGCTG+AGG | 0.624162 | 8_2:+66690274 | None:intergenic |
| GCTAAAGAACCAGTAACATG+TGG | 0.630947 | 8_2:-66689534 | Msa1263490:CDS |
| CTCATAGCAAAAGAACACTC+TGG | 0.643337 | 8_2:+66690403 | None:intergenic |
| CAATGTCAGGATCAATCCAA+AGG | 0.643953 | 8_2:-66690199 | Msa1263490:CDS |
| GGATCGGTGACTAAAATGTG+TGG | 0.665773 | 8_2:+66690646 | None:intergenic |
| TTCATGTGGAACTGTGAAGA+CGG | 0.666043 | 8_2:-66690622 | Msa1263490:CDS |
| ATAAACACAATAGCTCAAGT+GGG | 0.669427 | 8_2:+66689432 | None:intergenic |
| TGTCAGGATCAATCCAAAGG+TGG | 0.681857 | 8_2:-66690196 | Msa1263490:CDS |
| AACCACATGAAGTTCTACAA+AGG | 0.693483 | 8_2:+66690815 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTGAATTAATTTAAT+TGG | - | chr8_2:66690422-66690441 | Msa1263490:CDS | 10.0% |
| !! | TATTTATTTATACAATTATG+GGG | - | chr8_2:66690830-66690849 | Msa1263490:CDS | 10.0% |
| !!! | TGATTTTGAATTAATTTAAT+TGG | - | chr8_2:66690422-66690441 | Msa1263490:CDS | 10.0% |
| !! | TATTTATTTATACAATTATG+GGG | - | chr8_2:66690830-66690849 | Msa1263490:CDS | 10.0% |
| !!! | ATTATTGATAGTAATAAGAT+TGG | + | chr8_2:66689362-66689381 | None:intergenic | 15.0% |
| !!! | TACTTTTTTAATCATGTTAT+TGG | - | chr8_2:66690218-66690237 | Msa1263490:CDS | 15.0% |
| !! | AATTGGATTTATTATTTGTT+TGG | - | chr8_2:66690439-66690458 | Msa1263490:CDS | 15.0% |
| !!! | ATTATTGATAGTAATAAGAT+TGG | + | chr8_2:66689362-66689381 | None:intergenic | 15.0% |
| !!! | TACTTTTTTAATCATGTTAT+TGG | - | chr8_2:66690218-66690237 | Msa1263490:CDS | 15.0% |
| !! | AATTGGATTTATTATTTGTT+TGG | - | chr8_2:66690439-66690458 | Msa1263490:CDS | 15.0% |
| !!! | TAAGATTGGTTTTTGTTTTT+GGG | + | chr8_2:66689348-66689367 | None:intergenic | 20.0% |
| !!! | ATAAGATTGGTTTTTGTTTT+TGG | + | chr8_2:66689349-66689368 | None:intergenic | 20.0% |
| !! | ATATAGCTAACATTATGAAT+AGG | + | chr8_2:66689572-66689591 | None:intergenic | 20.0% |
| !!! | AACTATTGAGTAACAATTTT+TGG | - | chr8_2:66690398-66690417 | Msa1263490:CDS | 20.0% |
| !!! | TAAGATTGGTTTTTGTTTTT+GGG | + | chr8_2:66689348-66689367 | None:intergenic | 20.0% |
| !!! | ATAAGATTGGTTTTTGTTTT+TGG | + | chr8_2:66689349-66689368 | None:intergenic | 20.0% |
| !! | ATATAGCTAACATTATGAAT+AGG | + | chr8_2:66689572-66689591 | None:intergenic | 20.0% |
| !!! | AACTATTGAGTAACAATTTT+TGG | - | chr8_2:66690398-66690417 | Msa1263490:CDS | 20.0% |
| ! | GAAAGAATGAATCTGTAATA+TGG | + | chr8_2:66689500-66689519 | None:intergenic | 25.0% |
| ! | AATTTCACTACTCATTGTAA+TGG | - | chr8_2:66690130-66690149 | Msa1263490:CDS | 25.0% |
| ! | TCACAATCACAAGATAAAAT+AGG | + | chr8_2:66690177-66690196 | None:intergenic | 25.0% |
| ! | AATTAACATTCACAAAGTCA+TGG | - | chr8_2:66690541-66690560 | Msa1263490:CDS | 25.0% |
| ! | GAAAATTAAGCTTATGTTTG+TGG | - | chr8_2:66690575-66690594 | Msa1263490:CDS | 25.0% |
| ! | AAAGGAAAAATGTATGTATG+TGG | + | chr8_2:66690776-66690795 | None:intergenic | 25.0% |
| ! | GAAAGAATGAATCTGTAATA+TGG | + | chr8_2:66689500-66689519 | None:intergenic | 25.0% |
| ! | AATTTCACTACTCATTGTAA+TGG | - | chr8_2:66690130-66690149 | Msa1263490:CDS | 25.0% |
| ! | TCACAATCACAAGATAAAAT+AGG | + | chr8_2:66690177-66690196 | None:intergenic | 25.0% |
| ! | AATTAACATTCACAAAGTCA+TGG | - | chr8_2:66690541-66690560 | Msa1263490:CDS | 25.0% |
| ! | GAAAATTAAGCTTATGTTTG+TGG | - | chr8_2:66690575-66690594 | Msa1263490:CDS | 25.0% |
| ! | AAAGGAAAAATGTATGTATG+TGG | + | chr8_2:66690776-66690795 | None:intergenic | 25.0% |
| !!! | GTTTTTGGGTTATAGTTAGA+TGG | + | chr8_2:66689334-66689353 | None:intergenic | 30.0% |
| ! | AAAAGGATATTGGATTGGAA+TGG | + | chr8_2:66689453-66689472 | None:intergenic | 30.0% |
| ATGGAAAAAGGATATTGGAT+TGG | + | chr8_2:66689458-66689477 | None:intergenic | 30.0% | |
| CATCAATGGAAAAAGGATAT+TGG | + | chr8_2:66689463-66689482 | None:intergenic | 30.0% | |
| ! | TATCCTTTTTCCATTGATGA+TGG | - | chr8_2:66689464-66689483 | Msa1263490:three_prime_UTR | 30.0% |
| !! | TCTAAACTAAATGGTCTTGT+TGG | + | chr8_2:66689659-66689678 | None:intergenic | 30.0% |
| CAAGTTATGCTAGTGTTTAT+TGG | - | chr8_2:66689930-66689949 | Msa1263490:intron | 30.0% | |
| AGTGTTTATTGGAGAAATGT+TGG | - | chr8_2:66689941-66689960 | Msa1263490:intron | 30.0% | |
| TATTGAGGAACTTGATCATA+AGG | + | chr8_2:66689977-66689996 | None:intergenic | 30.0% | |
| TATGATCAAGTTCCTCAATA+TGG | - | chr8_2:66689977-66689996 | Msa1263490:intron | 30.0% | |
| ATGATCAAGTTCCTCAATAT+GGG | - | chr8_2:66689978-66689997 | Msa1263490:intron | 30.0% | |
| GAGTTTCTTGTGTTTATGTA+AGG | - | chr8_2:66690102-66690121 | Msa1263490:intron | 30.0% | |
| TTCTTGTGTTTATGTAAGGA+AGG | - | chr8_2:66690106-66690125 | Msa1263490:intron | 30.0% | |
| TTATCTTGTGATTGTGACTT+AGG | - | chr8_2:66690180-66690199 | Msa1263490:CDS | 30.0% | |
| GAAAAATGTATGTATGTGGT+TGG | + | chr8_2:66690772-66690791 | None:intergenic | 30.0% | |
| ATAAACACAATAGCTCAAGT+GGG | + | chr8_2:66690813-66690832 | None:intergenic | 30.0% | |
| AATAAACACAATAGCTCAAG+TGG | + | chr8_2:66690814-66690833 | None:intergenic | 30.0% | |
| !! | TTATTTTTCGTAACCTCTTC+AGG | - | chr8_2:66690980-66690999 | Msa1263490:five_prime_UTR | 30.0% |
| !!! | GTTTTTGGGTTATAGTTAGA+TGG | + | chr8_2:66689334-66689353 | None:intergenic | 30.0% |
| ! | AAAAGGATATTGGATTGGAA+TGG | + | chr8_2:66689453-66689472 | None:intergenic | 30.0% |
| ATGGAAAAAGGATATTGGAT+TGG | + | chr8_2:66689458-66689477 | None:intergenic | 30.0% | |
| CATCAATGGAAAAAGGATAT+TGG | + | chr8_2:66689463-66689482 | None:intergenic | 30.0% | |
| ! | TATCCTTTTTCCATTGATGA+TGG | - | chr8_2:66689464-66689483 | Msa1263490:three_prime_UTR | 30.0% |
| !! | TCTAAACTAAATGGTCTTGT+TGG | + | chr8_2:66689659-66689678 | None:intergenic | 30.0% |
| CAAGTTATGCTAGTGTTTAT+TGG | - | chr8_2:66689930-66689949 | Msa1263490:intron | 30.0% | |
| AGTGTTTATTGGAGAAATGT+TGG | - | chr8_2:66689941-66689960 | Msa1263490:intron | 30.0% | |
| TATTGAGGAACTTGATCATA+AGG | + | chr8_2:66689977-66689996 | None:intergenic | 30.0% | |
| TATGATCAAGTTCCTCAATA+TGG | - | chr8_2:66689977-66689996 | Msa1263490:intron | 30.0% | |
| ATGATCAAGTTCCTCAATAT+GGG | - | chr8_2:66689978-66689997 | Msa1263490:intron | 30.0% | |
| GAGTTTCTTGTGTTTATGTA+AGG | - | chr8_2:66690102-66690121 | Msa1263490:intron | 30.0% | |
| TTCTTGTGTTTATGTAAGGA+AGG | - | chr8_2:66690106-66690125 | Msa1263490:intron | 30.0% | |
| TTATCTTGTGATTGTGACTT+AGG | - | chr8_2:66690180-66690199 | Msa1263490:CDS | 30.0% | |
| GAAAAATGTATGTATGTGGT+TGG | + | chr8_2:66690772-66690791 | None:intergenic | 30.0% | |
| ATAAACACAATAGCTCAAGT+GGG | + | chr8_2:66690813-66690832 | None:intergenic | 30.0% | |
| AATAAACACAATAGCTCAAG+TGG | + | chr8_2:66690814-66690833 | None:intergenic | 30.0% | |
| TTAGAGATGAATGCATGAAC+AGG | + | chr8_2:66689294-66689313 | None:intergenic | 35.0% | |
| ! | GGATTGAGATTTTGTGAGAA+TGG | + | chr8_2:66689405-66689424 | None:intergenic | 35.0% |
| ACATGAAGTTCTACAAAGGA+TGG | + | chr8_2:66689426-66689445 | None:intergenic | 35.0% | |
| ATCCTTTGTAGAACTTCATG+TGG | - | chr8_2:66689425-66689444 | Msa1263490:three_prime_UTR | 35.0% | |
| AACCACATGAAGTTCTACAA+AGG | + | chr8_2:66689430-66689449 | None:intergenic | 35.0% | |
| CAACCATCATCAATGGAAAA+AGG | + | chr8_2:66689470-66689489 | None:intergenic | 35.0% | |
| !!! | TTTTCCATTGATGATGGTTG+TGG | - | chr8_2:66689470-66689489 | Msa1263490:three_prime_UTR | 35.0% |
| TGAATAGGATATCTTCCAGA+AGG | + | chr8_2:66689557-66689576 | None:intergenic | 35.0% | |
| GTGCTTGTGTCTAAACTAAA+TGG | + | chr8_2:66689668-66689687 | None:intergenic | 35.0% | |
| GGAAATTGTTCACAAAACAC+AGG | + | chr8_2:66689767-66689786 | None:intergenic | 35.0% | |
| CTCAAAGATTCAGTAGCTTT+AGG | + | chr8_2:66689890-66689909 | None:intergenic | 35.0% | |
| CTAAAGCTACTGAATCTTTG+AGG | - | chr8_2:66689888-66689907 | Msa1263490:intron | 35.0% | |
| TCAACTCTAATCCCATATTG+AGG | + | chr8_2:66689992-66690011 | None:intergenic | 35.0% | |
| ACTTGGATGATTACCTTTAG+TGG | - | chr8_2:66690257-66690276 | Msa1263490:CDS | 35.0% | |
| CTTGGATGATTACCTTTAGT+GGG | - | chr8_2:66690258-66690277 | Msa1263490:CDS | 35.0% | |
| TTGGATGATTACCTTTAGTG+GGG | - | chr8_2:66690259-66690278 | Msa1263490:CDS | 35.0% | |
| TATGTTAGTACGAGTGAAAC+TGG | + | chr8_2:66690354-66690373 | None:intergenic | 35.0% | |
| CACTCGTACTAACATAGTAT+TGG | - | chr8_2:66690358-66690377 | Msa1263490:CDS | 35.0% | |
| !! | CGTACTAACATAGTATTGGT+AGG | - | chr8_2:66690362-66690381 | Msa1263490:CDS | 35.0% |
| TTCAATCACCTGCAATTACA+TGG | + | chr8_2:66690499-66690518 | None:intergenic | 35.0% | |
| !! | TTTGTGGTTTTGCTTTGTGT+TGG | - | chr8_2:66690591-66690610 | Msa1263490:CDS | 35.0% |
| ! | GTTTTGCTTTGTGTTGGATT+TGG | - | chr8_2:66690597-66690616 | Msa1263490:CDS | 35.0% |
| ! | TTGTGTTGGATTTGGAATTC+TGG | - | chr8_2:66690605-66690624 | Msa1263490:CDS | 35.0% |
| !!! | GTTACTGCTATTTCAGCTTT+TGG | - | chr8_2:66690639-66690658 | Msa1263490:CDS | 35.0% |
| TGGGCTAAGAAAGTAACAAA+AGG | + | chr8_2:66690794-66690813 | None:intergenic | 35.0% | |
| TTAGAGATGAATGCATGAAC+AGG | + | chr8_2:66689294-66689313 | None:intergenic | 35.0% | |
| ! | GGATTGAGATTTTGTGAGAA+TGG | + | chr8_2:66689405-66689424 | None:intergenic | 35.0% |
| ACATGAAGTTCTACAAAGGA+TGG | + | chr8_2:66689426-66689445 | None:intergenic | 35.0% | |
| ATCCTTTGTAGAACTTCATG+TGG | - | chr8_2:66689425-66689444 | Msa1263490:three_prime_UTR | 35.0% | |
| AACCACATGAAGTTCTACAA+AGG | + | chr8_2:66689430-66689449 | None:intergenic | 35.0% | |
| CAACCATCATCAATGGAAAA+AGG | + | chr8_2:66689470-66689489 | None:intergenic | 35.0% | |
| !!! | TTTTCCATTGATGATGGTTG+TGG | - | chr8_2:66689470-66689489 | Msa1263490:three_prime_UTR | 35.0% |
| TGAATAGGATATCTTCCAGA+AGG | + | chr8_2:66689557-66689576 | None:intergenic | 35.0% | |
| GTGCTTGTGTCTAAACTAAA+TGG | + | chr8_2:66689668-66689687 | None:intergenic | 35.0% | |
| GGAAATTGTTCACAAAACAC+AGG | + | chr8_2:66689767-66689786 | None:intergenic | 35.0% | |
| CTCAAAGATTCAGTAGCTTT+AGG | + | chr8_2:66689890-66689909 | None:intergenic | 35.0% | |
| CTAAAGCTACTGAATCTTTG+AGG | - | chr8_2:66689888-66689907 | Msa1263490:intron | 35.0% | |
| TCAACTCTAATCCCATATTG+AGG | + | chr8_2:66689992-66690011 | None:intergenic | 35.0% | |
| ACTTGGATGATTACCTTTAG+TGG | - | chr8_2:66690257-66690276 | Msa1263490:CDS | 35.0% | |
| CTTGGATGATTACCTTTAGT+GGG | - | chr8_2:66690258-66690277 | Msa1263490:CDS | 35.0% | |
| TTGGATGATTACCTTTAGTG+GGG | - | chr8_2:66690259-66690278 | Msa1263490:CDS | 35.0% | |
| TATGTTAGTACGAGTGAAAC+TGG | + | chr8_2:66690354-66690373 | None:intergenic | 35.0% | |
| CACTCGTACTAACATAGTAT+TGG | - | chr8_2:66690358-66690377 | Msa1263490:CDS | 35.0% | |
| !! | CGTACTAACATAGTATTGGT+AGG | - | chr8_2:66690362-66690381 | Msa1263490:CDS | 35.0% |
| TTCAATCACCTGCAATTACA+TGG | + | chr8_2:66690499-66690518 | None:intergenic | 35.0% | |
| !! | TTTGTGGTTTTGCTTTGTGT+TGG | - | chr8_2:66690591-66690610 | Msa1263490:CDS | 35.0% |
| ! | GTTTTGCTTTGTGTTGGATT+TGG | - | chr8_2:66690597-66690616 | Msa1263490:CDS | 35.0% |
| ! | TTGTGTTGGATTTGGAATTC+TGG | - | chr8_2:66690605-66690624 | Msa1263490:CDS | 35.0% |
| !!! | GTTACTGCTATTTCAGCTTT+TGG | - | chr8_2:66690639-66690658 | Msa1263490:CDS | 35.0% |
| TGGGCTAAGAAAGTAACAAA+AGG | + | chr8_2:66690794-66690813 | None:intergenic | 35.0% | |
| ! | ATGAACAGGTACTAGGTTGA+TGG | + | chr8_2:66689280-66689299 | None:intergenic | 40.0% |
| TGAATGCATGAACAGGTACT+AGG | + | chr8_2:66689287-66689306 | None:intergenic | 40.0% | |
| ACTTCCACAACCATCATCAA+TGG | + | chr8_2:66689477-66689496 | None:intergenic | 40.0% | |
| CTTGAACTAAGAACACCTTC+TGG | - | chr8_2:66689539-66689558 | Msa1263490:CDS | 40.0% | |
| ACAGTTCCACATGAATGGAT+CGG | + | chr8_2:66689615-66689634 | None:intergenic | 40.0% | |
| TCTTCACAGTTCCACATGAA+TGG | + | chr8_2:66689620-66689639 | None:intergenic | 40.0% | |
| TTCATGTGGAACTGTGAAGA+CGG | - | chr8_2:66689620-66689639 | Msa1263490:intron | 40.0% | |
| TGTTCACAAAACACAGGCTT+TGG | + | chr8_2:66689761-66689780 | None:intergenic | 40.0% | |
| CAAGATGAATCACAGTGTTC+AGG | + | chr8_2:66689788-66689807 | None:intergenic | 40.0% | |
| CTCATAGCAAAAGAACACTC+TGG | + | chr8_2:66689842-66689861 | None:intergenic | 40.0% | |
| !! | GAGTGTTCTTTTGCTATGAG+TGG | - | chr8_2:66689842-66689861 | Msa1263490:intron | 40.0% |
| CAATGTCAGGATCAATCCAA+AGG | - | chr8_2:66690043-66690062 | Msa1263490:intron | 40.0% | |
| ! | GTGCAAAGTATCTATCGACT+TGG | - | chr8_2:66690240-66690259 | Msa1263490:CDS | 40.0% |
| ! | GATTACCTTTAGTGGGGTTT+TGG | - | chr8_2:66690265-66690284 | Msa1263490:CDS | 40.0% |
| AAGTTCCAAAACCCCACTAA+AGG | + | chr8_2:66690273-66690292 | None:intergenic | 40.0% | |
| GAACCTCAGATCTTGCTTAA+GGG | - | chr8_2:66690320-66690339 | Msa1263490:CDS | 40.0% | |
| ! | TGGCAGATCATGATAATGCA+AGG | - | chr8_2:66690459-66690478 | Msa1263490:CDS | 40.0% |
| ! | ATGATAATGCAAGGCACAGT+AGG | - | chr8_2:66690468-66690487 | Msa1263490:CDS | 40.0% |
| AGGAATGTCCATGTAATTGC+AGG | - | chr8_2:66690488-66690507 | Msa1263490:CDS | 40.0% | |
| !!! | ATTTCAGCTTTTGGAGCACT+TGG | - | chr8_2:66690648-66690667 | Msa1263490:CDS | 40.0% |
| TTGGAATTGGAGGTGGTATT+TGG | - | chr8_2:66690667-66690686 | Msa1263490:CDS | 40.0% | |
| GCTAAAGAACCAGTAACATG+TGG | - | chr8_2:66690708-66690727 | Msa1263490:CDS | 40.0% | |
| CTTTGAACTCCACATGTTAC+TGG | + | chr8_2:66690720-66690739 | None:intergenic | 40.0% | |
| GAGTTCAAAGCAATGAGAAC+AGG | - | chr8_2:66690730-66690749 | Msa1263490:CDS | 40.0% | |
| ! | ATGAACAGGTACTAGGTTGA+TGG | + | chr8_2:66689280-66689299 | None:intergenic | 40.0% |
| TGAATGCATGAACAGGTACT+AGG | + | chr8_2:66689287-66689306 | None:intergenic | 40.0% | |
| ACTTCCACAACCATCATCAA+TGG | + | chr8_2:66689477-66689496 | None:intergenic | 40.0% | |
| CTTGAACTAAGAACACCTTC+TGG | - | chr8_2:66689539-66689558 | Msa1263490:CDS | 40.0% | |
| ACAGTTCCACATGAATGGAT+CGG | + | chr8_2:66689615-66689634 | None:intergenic | 40.0% | |
| TCTTCACAGTTCCACATGAA+TGG | + | chr8_2:66689620-66689639 | None:intergenic | 40.0% | |
| TTCATGTGGAACTGTGAAGA+CGG | - | chr8_2:66689620-66689639 | Msa1263490:intron | 40.0% | |
| TGTTCACAAAACACAGGCTT+TGG | + | chr8_2:66689761-66689780 | None:intergenic | 40.0% | |
| CAAGATGAATCACAGTGTTC+AGG | + | chr8_2:66689788-66689807 | None:intergenic | 40.0% | |
| CTCATAGCAAAAGAACACTC+TGG | + | chr8_2:66689842-66689861 | None:intergenic | 40.0% | |
| !! | GAGTGTTCTTTTGCTATGAG+TGG | - | chr8_2:66689842-66689861 | Msa1263490:intron | 40.0% |
| CAATGTCAGGATCAATCCAA+AGG | - | chr8_2:66690043-66690062 | Msa1263490:intron | 40.0% | |
| ! | GTGCAAAGTATCTATCGACT+TGG | - | chr8_2:66690240-66690259 | Msa1263490:CDS | 40.0% |
| ! | GATTACCTTTAGTGGGGTTT+TGG | - | chr8_2:66690265-66690284 | Msa1263490:CDS | 40.0% |
| AAGTTCCAAAACCCCACTAA+AGG | + | chr8_2:66690273-66690292 | None:intergenic | 40.0% | |
| GAACCTCAGATCTTGCTTAA+GGG | - | chr8_2:66690320-66690339 | Msa1263490:CDS | 40.0% | |
| ! | TGGCAGATCATGATAATGCA+AGG | - | chr8_2:66690459-66690478 | Msa1263490:CDS | 40.0% |
| ! | ATGATAATGCAAGGCACAGT+AGG | - | chr8_2:66690468-66690487 | Msa1263490:CDS | 40.0% |
| AGGAATGTCCATGTAATTGC+AGG | - | chr8_2:66690488-66690507 | Msa1263490:CDS | 40.0% | |
| !!! | ATTTCAGCTTTTGGAGCACT+TGG | - | chr8_2:66690648-66690667 | Msa1263490:CDS | 40.0% |
| TTGGAATTGGAGGTGGTATT+TGG | - | chr8_2:66690667-66690686 | Msa1263490:CDS | 40.0% | |
| GCTAAAGAACCAGTAACATG+TGG | - | chr8_2:66690708-66690727 | Msa1263490:CDS | 40.0% | |
| CTTTGAACTCCACATGTTAC+TGG | + | chr8_2:66690720-66690739 | None:intergenic | 40.0% | |
| GAGTTCAAAGCAATGAGAAC+AGG | - | chr8_2:66690730-66690749 | Msa1263490:CDS | 40.0% | |
| GGATCGGTGACTAAAATGTG+TGG | + | chr8_2:66689599-66689618 | None:intergenic | 45.0% | |
| TAGTCACCGATCCATTCATG+TGG | - | chr8_2:66689606-66689625 | Msa1263490:CDS | 45.0% | |
| GGAACTTGATCATAAGGCTG+AGG | + | chr8_2:66689971-66689990 | None:intergenic | 45.0% | |
| TTGATATTCCAGTGACGACG+CGG | - | chr8_2:66690014-66690033 | Msa1263490:intron | 45.0% | |
| TGTCAGGATCAATCCAAAGG+TGG | - | chr8_2:66690046-66690065 | Msa1263490:intron | 45.0% | |
| TGAGGTTCGAACTTTGTCGA+TGG | + | chr8_2:66690308-66690327 | None:intergenic | 45.0% | |
| CGAACCTCAGATCTTGCTTA+AGG | - | chr8_2:66690319-66690338 | Msa1263490:CDS | 45.0% | |
| GATCCCTTAAGCAAGATCTG+AGG | + | chr8_2:66690326-66690345 | None:intergenic | 45.0% | |
| ! | GATTTGGAATTCTGGCTGCA+GGG | - | chr8_2:66690613-66690632 | Msa1263490:CDS | 45.0% |
| !!! | GCTTTTGGAGCACTTGGAAT+TGG | - | chr8_2:66690654-66690673 | Msa1263490:CDS | 45.0% |
| ! | TTTGGAGCACTTGGAATTGG+AGG | - | chr8_2:66690657-66690676 | Msa1263490:CDS | 45.0% |
| GGATCGGTGACTAAAATGTG+TGG | + | chr8_2:66689599-66689618 | None:intergenic | 45.0% | |
| TAGTCACCGATCCATTCATG+TGG | - | chr8_2:66689606-66689625 | Msa1263490:CDS | 45.0% | |
| GGAACTTGATCATAAGGCTG+AGG | + | chr8_2:66689971-66689990 | None:intergenic | 45.0% | |
| TTGATATTCCAGTGACGACG+CGG | - | chr8_2:66690014-66690033 | Msa1263490:intron | 45.0% | |
| TGTCAGGATCAATCCAAAGG+TGG | - | chr8_2:66690046-66690065 | Msa1263490:intron | 45.0% | |
| TGAGGTTCGAACTTTGTCGA+TGG | + | chr8_2:66690308-66690327 | None:intergenic | 45.0% | |
| CGAACCTCAGATCTTGCTTA+AGG | - | chr8_2:66690319-66690338 | Msa1263490:CDS | 45.0% | |
| GATCCCTTAAGCAAGATCTG+AGG | + | chr8_2:66690326-66690345 | None:intergenic | 45.0% | |
| ! | GATTTGGAATTCTGGCTGCA+GGG | - | chr8_2:66690613-66690632 | Msa1263490:CDS | 45.0% |
| !!! | GCTTTTGGAGCACTTGGAAT+TGG | - | chr8_2:66690654-66690673 | Msa1263490:CDS | 45.0% |
| ! | TTTGGAGCACTTGGAATTGG+AGG | - | chr8_2:66690657-66690676 | Msa1263490:CDS | 45.0% |
| !! | TTTATTTATTTATACAATTA+TGG | - | chr8_2:66690828-66690847 | Msa1263490:CDS | 5.0% |
| !! | TTATTTATTTATACAATTAT+GGG | - | chr8_2:66690829-66690848 | Msa1263490:CDS | 5.0% |
| !! | TTTATTTATTTATACAATTA+TGG | - | chr8_2:66690828-66690847 | Msa1263490:CDS | 5.0% |
| !! | TTATTTATTTATACAATTAT+GGG | - | chr8_2:66690829-66690848 | Msa1263490:CDS | 5.0% |
| CAGGATCAATCCAAAGGTGG+TGG | - | chr8_2:66690049-66690068 | Msa1263490:intron | 50.0% | |
| ! | GATCAATCCAAAGGTGGTGG+TGG | - | chr8_2:66690052-66690071 | Msa1263490:intron | 50.0% |
| ACAAGTTCCACCACCACCTT+TGG | + | chr8_2:66690062-66690081 | None:intergenic | 50.0% | |
| !! | AAAGGTGGTGGTGGAACTTG+TGG | - | chr8_2:66690061-66690080 | Msa1263490:intron | 50.0% |
| ! | GGATTTGGAATTCTGGCTGC+AGG | - | chr8_2:66690612-66690631 | Msa1263490:CDS | 50.0% |
| TTATGGGGCCTCTCTTACTC+AGG | - | chr8_2:66690845-66690864 | Msa1263490:CDS | 50.0% | |
| TATGGGGCCTCTCTTACTCA+GGG | - | chr8_2:66690846-66690865 | Msa1263490:CDS | 50.0% | |
| !!! | CTCAGGGGGCATGTTTTGAT+TGG | - | chr8_2:66690862-66690881 | Msa1263490:CDS | 50.0% |
| CAGGATCAATCCAAAGGTGG+TGG | - | chr8_2:66690049-66690068 | Msa1263490:intron | 50.0% | |
| ! | GATCAATCCAAAGGTGGTGG+TGG | - | chr8_2:66690052-66690071 | Msa1263490:intron | 50.0% |
| ACAAGTTCCACCACCACCTT+TGG | + | chr8_2:66690062-66690081 | None:intergenic | 50.0% | |
| !! | AAAGGTGGTGGTGGAACTTG+TGG | - | chr8_2:66690061-66690080 | Msa1263490:intron | 50.0% |
| ! | GGATTTGGAATTCTGGCTGC+AGG | - | chr8_2:66690612-66690631 | Msa1263490:CDS | 50.0% |
| TTATGGGGCCTCTCTTACTC+AGG | - | chr8_2:66690845-66690864 | Msa1263490:CDS | 50.0% | |
| TATGGGGCCTCTCTTACTCA+GGG | - | chr8_2:66690846-66690865 | Msa1263490:CDS | 50.0% | |
| !!! | CTCAGGGGGCATGTTTTGAT+TGG | - | chr8_2:66690862-66690881 | Msa1263490:CDS | 50.0% |
| GACGCGGTGTCTTCAATGTC+AGG | - | chr8_2:66690030-66690049 | Msa1263490:intron | 55.0% | |
| ! | GGAGCACTTGGAATTGGAGG+TGG | - | chr8_2:66690660-66690679 | Msa1263490:CDS | 55.0% |
| ATGGGGCCTCTCTTACTCAG+GGG | - | chr8_2:66690847-66690866 | Msa1263490:CDS | 55.0% | |
| ACATGCCCCCTGAGTAAGAG+AGG | + | chr8_2:66690856-66690875 | None:intergenic | 55.0% | |
| GACGCGGTGTCTTCAATGTC+AGG | - | chr8_2:66690030-66690049 | Msa1263490:intron | 55.0% | |
| ! | GGAGCACTTGGAATTGGAGG+TGG | - | chr8_2:66690660-66690679 | Msa1263490:CDS | 55.0% |
| ATGGGGCCTCTCTTACTCAG+GGG | - | chr8_2:66690847-66690866 | Msa1263490:CDS | 55.0% | |
| ACATGCCCCCTGAGTAAGAG+AGG | + | chr8_2:66690856-66690875 | None:intergenic | 55.0% | |
| TGAAGACACCGCGTCGTCAC+TGG | + | chr8_2:66690025-66690044 | None:intergenic | 60.0% | |
| TGGGGCCTCTCTTACTCAGG+GGG | - | chr8_2:66690848-66690867 | Msa1263490:CDS | 60.0% | |
| TGAAGACACCGCGTCGTCAC+TGG | + | chr8_2:66690025-66690044 | None:intergenic | 60.0% | |
| TGGGGCCTCTCTTACTCAGG+GGG | - | chr8_2:66690848-66690867 | Msa1263490:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 66689262 | 66691002 | 66689262 | ID=Msa1263490;Name=Msa1263490 |
| chr8_2 | mRNA | 66689262 | 66691002 | 66689262 | ID=Msa1263490-mRNA-1;Parent=Msa1263490;Name=Msa1263490-mRNA-1;_AED=0.01;_eAED=0.01;_QI=58|1|1|1|1|1|3|241|334 |
| chr8_2 | exon | 66689262 | 66689630 | 66689262 | ID=Msa1263490-mRNA-1:exon:21832;Parent=Msa1263490-mRNA-1 |
| chr8_2 | exon | 66689755 | 66689799 | 66689755 | ID=Msa1263490-mRNA-1:exon:21831;Parent=Msa1263490-mRNA-1 |
| chr8_2 | exon | 66690113 | 66691002 | 66690113 | ID=Msa1263490-mRNA-1:exon:21830;Parent=Msa1263490-mRNA-1 |
| chr8_2 | five_prime_UTR | 66690945 | 66691002 | 66690945 | ID=Msa1263490-mRNA-1:five_prime_utr;Parent=Msa1263490-mRNA-1 |
| chr8_2 | CDS | 66690113 | 66690944 | 66690113 | ID=Msa1263490-mRNA-1:cds;Parent=Msa1263490-mRNA-1 |
| chr8_2 | CDS | 66689755 | 66689799 | 66689755 | ID=Msa1263490-mRNA-1:cds;Parent=Msa1263490-mRNA-1 |
| chr8_2 | CDS | 66689503 | 66689630 | 66689503 | ID=Msa1263490-mRNA-1:cds;Parent=Msa1263490-mRNA-1 |
| chr8_2 | three_prime_UTR | 66689262 | 66689502 | 66689262 | ID=Msa1263490-mRNA-1:three_prime_utr;Parent=Msa1263490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
