Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522870 | XP_003603819.2 | 94.878 | 410 | 19 | 2 | 27 | 435 | 1 | 409 | 0.0 | 773 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522870 | sp|Q3ECD0|PUS2_ARATH | 67.521 | 351 | 97 | 3 | 88 | 435 | 62 | 398 | 2.41e-163 | 469 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522870 | G7J5V2 | 94.878 | 410 | 19 | 2 | 27 | 435 | 1 | 409 | 0.0 | 773 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001420 | Msa0522870 | 0.804985 | 1.660743e-49 | -8.615850e-47 |
| Msa0025340 | Msa0522870 | 0.801256 | 9.809665e-49 | -8.615850e-47 |
| Msa0032990 | Msa0522870 | 0.806666 | 7.361951e-50 | -8.615850e-47 |
| Msa0055530 | Msa0522870 | 0.802267 | 6.083886e-49 | -8.615850e-47 |
| Msa0072910 | Msa0522870 | 0.809525 | 1.812159e-50 | -8.615850e-47 |
| Msa0076550 | Msa0522870 | 0.828787 | 7.404223e-55 | -8.615850e-47 |
| Msa0121080 | Msa0522870 | 0.805868 | 1.084587e-49 | -8.615850e-47 |
| Msa0138800 | Msa0522870 | 0.804033 | 2.622552e-49 | -8.615850e-47 |
| Msa0190400 | Msa0522870 | 0.827639 | 1.399669e-54 | -8.615850e-47 |
| Msa0190840 | Msa0522870 | 0.802662 | 5.044572e-49 | -8.615850e-47 |
| Msa0192020 | Msa0522870 | 0.804208 | 2.412024e-49 | -8.615850e-47 |
| Msa0192710 | Msa0522870 | 0.809964 | 1.458480e-50 | -8.615850e-47 |
| Msa0218860 | Msa0522870 | 0.804462 | 2.135464e-49 | -8.615850e-47 |
| Msa0365350 | Msa0522870 | 0.803746 | 3.009035e-49 | -8.615850e-47 |
| Msa0373950 | Msa0522870 | 0.804338 | 2.266816e-49 | -8.615850e-47 |
| Msa0384570 | Msa0522870 | 0.832203 | 1.081098e-55 | -8.615850e-47 |
| Msa0385870 | Msa0522870 | 0.817919 | 2.568298e-52 | -8.615850e-47 |
| Msa0418790 | Msa0522870 | 0.802694 | 4.967108e-49 | -8.615850e-47 |
| Msa0420280 | Msa0522870 | 0.816104 | 6.568746e-52 | -8.615850e-47 |
| Msa0420800 | Msa0522870 | 0.805758 | 1.143680e-49 | -8.615850e-47 |
| Msa0434630 | Msa0522870 | 0.801649 | 8.149704e-49 | -8.615850e-47 |
| Msa0435740 | Msa0522870 | 0.963777 | 1.675553e-122 | -8.615850e-47 |
| Msa0440220 | Msa0522870 | 0.812621 | 3.866019e-51 | -8.615850e-47 |
| Msa0457380 | Msa0522870 | 0.804447 | 2.151062e-49 | -8.615850e-47 |
| Msa0474640 | Msa0522870 | 0.811061 | 8.453577e-51 | -8.615850e-47 |
| Msa0479640 | Msa0522870 | 0.962091 | 1.820701e-120 | -8.615850e-47 |
| Msa0244320 | Msa0522870 | 0.810807 | 9.593787e-51 | -8.615850e-47 |
| Msa0267130 | Msa0522870 | 0.808720 | 2.695829e-50 | -8.615850e-47 |
| Msa0273550 | Msa0522870 | 0.849009 | 4.255511e-60 | -8.615850e-47 |
| Msa0290590 | Msa0522870 | 0.811617 | 6.399819e-51 | -8.615850e-47 |
| Msa0290600 | Msa0522870 | 0.814798 | 1.282206e-51 | -8.615850e-47 |
| Msa0311130 | Msa0522870 | 0.806715 | 7.190008e-50 | -8.615850e-47 |
| Msa0319720 | Msa0522870 | 0.805592 | 1.239122e-49 | -8.615850e-47 |
| Msa0340440 | Msa0522870 | 0.806535 | 7.848504e-50 | -8.615850e-47 |
| Msa0519090 | Msa0522870 | 0.804797 | 1.817813e-49 | -8.615850e-47 |
| Msa0522870 | Msa0528870 | 0.830214 | 3.331048e-55 | -8.615850e-47 |
| Msa0522870 | Msa0553230 | 0.809599 | 1.747614e-50 | -8.615850e-47 |
| Msa0522870 | Msa0558220 | 0.816005 | 6.911722e-52 | -8.615850e-47 |
| Msa0522870 | Msa0695930 | 0.804763 | 1.848229e-49 | -8.615850e-47 |
| Msa0522870 | Msa0712500 | 0.812818 | 3.501634e-51 | -8.615850e-47 |
| Msa0522870 | Msa0755570 | 0.809178 | 2.151621e-50 | -8.615850e-47 |
| Msa0522870 | Msa0835030 | 0.810164 | 1.320733e-50 | -8.615850e-47 |
| Msa0522870 | Msa0905450 | 0.801722 | 7.872502e-49 | -8.615850e-47 |
| Msa0522870 | Msa1011060 | 0.822427 | 2.382157e-53 | -8.615850e-47 |
| Msa0522870 | Msa1038040 | 0.801121 | 1.045418e-48 | -8.615850e-47 |
| Msa0522870 | Msa1052600 | 0.829002 | 6.567850e-55 | -8.615850e-47 |
| Msa0522870 | Msa1068110 | 0.828077 | 1.098719e-54 | -8.615850e-47 |
| Msa0522870 | Msa1093250 | 0.815001 | 1.155822e-51 | -8.615850e-47 |
| Msa0522870 | Msa1106830 | 0.817252 | 3.631492e-52 | -8.615850e-47 |
| Msa0522870 | Msa1150250 | 0.836330 | 9.969234e-57 | -8.615850e-47 |
| Msa0522870 | Msa1243860 | 0.813539 | 2.432473e-51 | -8.615850e-47 |
| Msa0522870 | Msa1281220 | -0.803259 | 3.797013e-49 | -8.615850e-47 |
| Msa0522870 | Msa1296930 | 0.806218 | 9.152659e-50 | -8.615850e-47 |
| Msa0522870 | Msa1308010 | 0.801773 | 7.684904e-49 | -8.615850e-47 |
| Msa0522870 | Msa1335210 | 0.809445 | 1.885830e-50 | -8.615850e-47 |
| Msa0522870 | Msa1337950 | 0.811382 | 7.200122e-51 | -8.615850e-47 |
| Msa0522870 | Msa1348630 | 0.805086 | 1.581573e-49 | -8.615850e-47 |
| Msa0522870 | Msa1375600 | 0.816286 | 5.979374e-52 | -8.615850e-47 |
| Msa0522870 | Msa1376510 | 0.819420 | 1.172293e-52 | -8.615850e-47 |
| Msa0522870 | Msa1376590 | 0.842272 | 2.862343e-58 | -8.615850e-47 |
| Msa0522870 | Msa1437320 | 0.805414 | 1.350158e-49 | -8.615850e-47 |
| Msa0522870 | Msa1444070 | 0.841199 | 5.491946e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522870 | MtrunA17_Chr3g0143321 | 94.878 | 410 | 19 | 2 | 27 | 435 | 1 | 409 | 0.0 | 773 |
| Msa0522870 | MtrunA17_Chr1g0200011 | 25.271 | 277 | 153 | 7 | 134 | 395 | 54 | 291 | 1.55e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522870 | AT1G76050.2 | 67.521 | 351 | 97 | 3 | 88 | 435 | 62 | 398 | 2.45e-164 | 469 |
| Msa0522870 | AT1G76050.1 | 66.165 | 266 | 73 | 3 | 88 | 350 | 62 | 313 | 1.77e-115 | 341 |
| Msa0522870 | AT3G52260.4 | 26.429 | 280 | 147 | 7 | 134 | 394 | 56 | 295 | 9.64e-17 | 81.6 |
| Msa0522870 | AT3G52260.2 | 26.071 | 280 | 148 | 7 | 134 | 394 | 56 | 295 | 3.76e-16 | 80.1 |
Find 110 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCCGGCGTAATTCGATTT+TGG | 0.204182 | 3_4:+76201187 | None:intergenic |
| TCGTGCGCATGCCAAGTATT+TGG | 0.214985 | 3_4:-76197013 | Msa0522870:CDS |
| ACGGAATTTATAGTTGTTAA+TGG | 0.217365 | 3_4:+76201267 | None:intergenic |
| GAATCTGATGATGAACTTAA+TGG | 0.254410 | 3_4:-76199148 | Msa0522870:CDS |
| ATGAAGTTCGAAAGTGAAAT+TGG | 0.259397 | 3_4:+76201311 | None:intergenic |
| GGGGTACCTACTCCAGTTTC+TGG | 0.276248 | 3_4:-76198803 | Msa0522870:CDS |
| ATCATACGAAGCCGGTTATT+AGG | 0.304094 | 3_4:+76198752 | None:intergenic |
| ACGTCTGGGACACTTGTAAA+TGG | 0.307453 | 3_4:-76199238 | Msa0522870:CDS |
| TGCCTTCATGCTTTGACTCT+CGG | 0.309092 | 3_4:-76196862 | Msa0522870:CDS |
| CGTGCGCATGCCAAGTATTT+GGG | 0.328224 | 3_4:-76197012 | Msa0522870:CDS |
| CGGAATTTATAGTTGTTAAT+GGG | 0.336983 | 3_4:+76201268 | None:intergenic |
| ACCTCAACACGTCCAGAAAC+TGG | 0.356510 | 3_4:+76198791 | None:intergenic |
| GCCTTCATGCTTTGACTCTC+GGG | 0.373527 | 3_4:-76196861 | Msa0522870:CDS |
| CTGCTAGGTGATGAGGTATA+TGG | 0.375337 | 3_4:-76196982 | Msa0522870:CDS |
| AAAGTAATTGAGATACTTGC+TGG | 0.384759 | 3_4:-76198164 | Msa0522870:CDS |
| AAACAGTTTCTGAGCTAGAT+AGG | 0.391798 | 3_4:-76196888 | Msa0522870:CDS |
| TCTTTAGAAAATTCAACATT+TGG | 0.398853 | 3_4:+76199193 | None:intergenic |
| GTTGAGTGGAAGTTGGAAAC+TGG | 0.401765 | 3_4:-76198125 | Msa0522870:CDS |
| TCTAATCTGTGTACAATCCC+TGG | 0.409587 | 3_4:+76199061 | None:intergenic |
| GAAAATTGAGACTCGATAGT+TGG | 0.424427 | 3_4:-76201120 | Msa0522870:CDS |
| GGAAACTGGGCGCACTCATC+AGG | 0.428189 | 3_4:-76198111 | Msa0522870:intron |
| TTAATGGGAGAGAAGTAAAA+TGG | 0.431537 | 3_4:+76201283 | None:intergenic |
| CCAGCACCTGGCAATACGTC+TGG | 0.433660 | 3_4:-76199253 | Msa0522870:CDS |
| TAGAAAATTCAACATTTGGC+AGG | 0.440551 | 3_4:+76199197 | None:intergenic |
| TGGATTTCTTCTCGCATCAA+TGG | 0.441664 | 3_4:-76201100 | Msa0522870:CDS |
| GTTTCTTTCAATGTCAGAGC+TGG | 0.450108 | 3_4:-76199717 | Msa0522870:CDS |
| CAGAGGTACACCCAAATACT+TGG | 0.452967 | 3_4:+76197002 | None:intergenic |
| CTTCGTATGATCGCTGTAGC+TGG | 0.457054 | 3_4:-76198740 | Msa0522870:CDS |
| TACGACGGTGGAATCAAATC+TGG | 0.460914 | 3_4:-76201142 | Msa0522870:CDS |
| GTCTACGTTAGTCTCACTGC+CGG | 0.477724 | 3_4:-76198824 | Msa0522870:CDS |
| TTATTAGGATCACGGCCAAC+AGG | 0.479835 | 3_4:+76198767 | None:intergenic |
| TTCGGAATTACCATGTGAGC+AGG | 0.484681 | 3_4:+76199585 | None:intergenic |
| CAACATTTGGCAGGTTGCAA+TGG | 0.489674 | 3_4:+76199206 | None:intergenic |
| ACCCTTCAGAAGAACTTGAC+TGG | 0.494113 | 3_4:+76199116 | None:intergenic |
| TTTCTTTCAATGTCAGAGCT+GGG | 0.495851 | 3_4:-76199716 | Msa0522870:CDS |
| GAATTACGCCGGCGTGCGGT+TGG | 0.496847 | 3_4:-76201179 | Msa0522870:CDS |
| TTGGCCGTGATCCTAATAAC+CGG | 0.497077 | 3_4:-76198763 | Msa0522870:CDS |
| TGCATTGGTTGAGTGGAAGT+TGG | 0.497604 | 3_4:-76198132 | Msa0522870:CDS |
| TCCAGTTTCTGGACGTGTTG+AGG | 0.498584 | 3_4:-76198792 | Msa0522870:CDS |
| GCTGGACTCGTTCATGTCAA+TGG | 0.501112 | 3_4:-76201043 | Msa0522870:CDS |
| TCACCTACTAGCCGCATGAC+GGG | 0.501679 | 3_4:+76198697 | None:intergenic |
| AACATTTCGCTATGCAAACT+CGG | 0.501751 | 3_4:+76196913 | None:intergenic |
| GTAGCTGTGCATTGGTTGAG+TGG | 0.505625 | 3_4:-76198139 | Msa0522870:CDS |
| CAATGGCCGTGTTGTTGATA+AGG | 0.509560 | 3_4:-76201026 | Msa0522870:intron |
| GCAGCAGTTGAGAGCTGTGC+CGG | 0.509649 | 3_4:-76199664 | Msa0522870:CDS |
| CATAAATAAACCTGCTCACA+TGG | 0.510867 | 3_4:-76199595 | Msa0522870:intron |
| CTCACTTGATATGGAATGGA+AGG | 0.511310 | 3_4:-76201458 | None:intergenic |
| TCTACGTTAGTCTCACTGCC+GGG | 0.511350 | 3_4:-76198823 | Msa0522870:CDS |
| GTTTATTTATGACTAGCAAA+TGG | 0.513827 | 3_4:+76199607 | None:intergenic |
| AGTGTCCCAGACGTATTGCC+AGG | 0.521402 | 3_4:+76199247 | None:intergenic |
| GTCCAGTCAAGTATTAAAGC+TGG | 0.521976 | 3_4:-76201061 | Msa0522870:CDS |
| GAAATCGTCGACTACGACGG+TGG | 0.522087 | 3_4:-76201154 | Msa0522870:CDS |
| CGGATTTCGCAATGGAGGAA+CGG | 0.524552 | 3_4:+76201248 | None:intergenic |
| TGCAAACTCGGAGTTGTTCG+TGG | 0.526136 | 3_4:+76196925 | None:intergenic |
| TCAACTCACTTGATATGGAA+TGG | 0.526354 | 3_4:-76201462 | None:intergenic |
| TCCCAGTCAAGTTCTTCTGA+AGG | 0.527724 | 3_4:-76199118 | Msa0522870:CDS |
| GTCCAGCTTTAATACTTGAC+TGG | 0.528396 | 3_4:+76201059 | None:intergenic |
| CCCTTCAGAAGAACTTGACT+GGG | 0.529961 | 3_4:+76199117 | None:intergenic |
| AAGCCCGTCATGCGGCTAGT+AGG | 0.531246 | 3_4:-76198700 | Msa0522870:intron |
| ATCATCGAAGAAAGTAGAAA+CGG | 0.535644 | 3_4:+76201228 | None:intergenic |
| TTCGATGATTCAAACTCCAA+AGG | 0.541777 | 3_4:-76201214 | Msa0522870:CDS |
| TTATCGCTTAACACCTCATG+TGG | 0.549398 | 3_4:-76201367 | Msa0522870:CDS |
| TAGGTTGTGCATCCAGCACC+TGG | 0.549682 | 3_4:-76199265 | Msa0522870:CDS |
| CCAGACGTATTGCCAGGTGC+TGG | 0.551763 | 3_4:+76199253 | None:intergenic |
| CTAATCTGTGTACAATCCCT+GGG | 0.557086 | 3_4:+76199062 | None:intergenic |
| CCCAGTCAAGTTCTTCTGAA+GGG | 0.559475 | 3_4:-76199117 | Msa0522870:CDS |
| GGACGTGTTGAGGTTCCTGT+TGG | 0.563398 | 3_4:-76198782 | Msa0522870:CDS |
| TGGGTTACTAGTTGTCGCTA+AGG | 0.563661 | 3_4:-76199026 | Msa0522870:intron |
| TGTACCTCTGCTAGGTGATG+AGG | 0.565230 | 3_4:-76196989 | Msa0522870:CDS |
| AAGTAATTGAGATACTTGCT+GGG | 0.576544 | 3_4:-76198163 | Msa0522870:CDS |
| CAGCACCTGGCAATACGTCT+GGG | 0.578291 | 3_4:-76199252 | Msa0522870:CDS |
| TGTGCCGGAAAACATACCTC+TGG | 0.579322 | 3_4:-76199649 | Msa0522870:CDS |
| TCTGTGGCATCAATTCGCCC+AGG | 0.579381 | 3_4:-76199079 | Msa0522870:CDS |
| GCATGGTCTTGTCATTGCTA+CGG | 0.579433 | 3_4:-76196948 | Msa0522870:CDS |
| AGATTAGACAAAGGCACGAG+TGG | 0.588012 | 3_4:-76199046 | Msa0522870:CDS |
| ATCACCTACTAGCCGCATGA+CGG | 0.592873 | 3_4:+76198696 | None:intergenic |
| TTCTTTCAATGTCAGAGCTG+GGG | 0.593498 | 3_4:-76199715 | Msa0522870:CDS |
| CTAGGTGATGAGGTATATGG+AGG | 0.595073 | 3_4:-76196979 | Msa0522870:CDS |
| TATTTGGGTGTACCTCTGCT+AGG | 0.595506 | 3_4:-76196997 | Msa0522870:CDS |
| CTGTGGCATCAATTCGCCCA+GGG | 0.600609 | 3_4:-76199078 | Msa0522870:CDS |
| GTTAGATTCTAGATTGTCTG+TGG | 0.602572 | 3_4:-76199095 | Msa0522870:CDS |
| ACCCGAGAGTCAAAGCATGA+AGG | 0.607294 | 3_4:+76196860 | None:intergenic |
| TTCTGTGAAAGCCCGTCATG+CGG | 0.607595 | 3_4:-76198708 | Msa0522870:CDS |
| TTGAGTGGAAGTTGGAAACT+GGG | 0.615139 | 3_4:-76198124 | Msa0522870:CDS |
| AGAGTCAAAGCATGAAGGCA+AGG | 0.615312 | 3_4:+76196865 | None:intergenic |
| TCAAGCTACGCACTATCAAG+AGG | 0.626322 | 3_4:-76198847 | Msa0522870:CDS |
| AGTAGAAACGGATTTCGCAA+TGG | 0.630315 | 3_4:+76201240 | None:intergenic |
| GAAGAAATCGTCGACTACGA+CGG | 0.630430 | 3_4:-76201157 | Msa0522870:CDS |
| AATCGAATTACGCCGGCGTG+CGG | 0.637848 | 3_4:-76201183 | Msa0522870:CDS |
| CAAGCTACGCACTATCAAGA+GGG | 0.647303 | 3_4:-76198846 | Msa0522870:CDS |
| GATTAGACAAAGGCACGAGT+GGG | 0.651038 | 3_4:-76199045 | Msa0522870:CDS |
| AGTAATTGAGATACTTGCTG+GGG | 0.652006 | 3_4:-76198162 | Msa0522870:CDS |
| CTACAGCGATCATACGAAGC+CGG | 0.657140 | 3_4:+76198744 | None:intergenic |
| AGAAACGGATTTCGCAATGG+AGG | 0.657913 | 3_4:+76201243 | None:intergenic |
| ATATGGAGGGACGAAAAGCA+TGG | 0.659140 | 3_4:-76196965 | Msa0522870:CDS |
| GAACCAAAATCGAATTACGC+CGG | 0.662494 | 3_4:-76201190 | Msa0522870:CDS |
| TGAGATCAAATGTACGATTG+CGG | 0.665499 | 3_4:-76199691 | Msa0522870:CDS |
| CTCACTAGATAGAACTTCCG+CGG | 0.674317 | 3_4:+76201405 | None:intergenic |
| GAAGCCGGTTATTAGGATCA+CGG | 0.679316 | 3_4:+76198759 | None:intergenic |
| GATTTCTTCCAACCGCACGC+CGG | 0.680238 | 3_4:+76201171 | None:intergenic |
| ACACGTCCAGAAACTGGAGT+AGG | 0.683054 | 3_4:+76198797 | None:intergenic |
| TCTTCATAAACTATATCCAG+AGG | 0.684572 | 3_4:+76199633 | None:intergenic |
| CTACGTTAGTCTCACTGCCG+GGG | 0.686770 | 3_4:-76198822 | Msa0522870:CDS |
| AGAAACTGGAGTAGGTACCC+CGG | 0.688257 | 3_4:+76198805 | None:intergenic |
| TAGGTGATGAGGTATATGGA+GGG | 0.689938 | 3_4:-76196978 | Msa0522870:CDS |
| AACACCGCAAAATCCACATG+AGG | 0.697166 | 3_4:+76201354 | None:intergenic |
| TATACCTCATCACCTAGCAG+AGG | 0.705895 | 3_4:+76196985 | None:intergenic |
| AGACTACCTTATCAACAACA+CGG | 0.706446 | 3_4:+76201020 | None:intergenic |
| ATTGTACACAGATTAGACAA+AGG | 0.708980 | 3_4:-76199055 | Msa0522870:CDS |
| GTAATTGAGATACTTGCTGG+GGG | 0.718933 | 3_4:-76198161 | Msa0522870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTAATATTGAATTATATT+AGG | - | chr3_4:76199652-76199671 | Msa0522870:CDS | 10.0% |
| !! | TAATATTACATATTACATTT+GGG | - | chr3_4:76200009-76200028 | Msa0522870:intron | 10.0% |
| !! | AAATATTAAAATAGATTTAG+AGG | - | chr3_4:76201025-76201044 | Msa0522870:intron | 10.0% |
| !! | ATCATTTAAATATTCAAGAA+TGG | + | chr3_4:76198056-76198075 | None:intergenic | 15.0% |
| !! | ATATTACATATATTTAGCAA+TGG | + | chr3_4:76199995-76200014 | None:intergenic | 15.0% |
| !! | GTAATATTACATATTACATT+TGG | - | chr3_4:76200008-76200027 | Msa0522870:intron | 15.0% |
| !!! | GTTTTCATATATTATATCTT+AGG | + | chr3_4:76200482-76200501 | None:intergenic | 15.0% |
| !! | TTAGAAGATATTATAAGTTT+AGG | + | chr3_4:76201231-76201250 | None:intergenic | 15.0% |
| !!! | ATTACTACGAATTTTCTATT+TGG | - | chr3_4:76197344-76197363 | Msa0522870:intron | 20.0% |
| !!! | AATAAATAAATGCTCACTTT+TGG | + | chr3_4:76197620-76197639 | None:intergenic | 20.0% |
| !! | AAATATTCTGAGTATAATAG+TGG | - | chr3_4:76198220-76198239 | Msa0522870:intron | 20.0% |
| !! | ATAAATATATTCTAGGTCTA+GGG | + | chr3_4:76198361-76198380 | None:intergenic | 20.0% |
| !! | AAATAACCAAACAAAAAACT+GGG | + | chr3_4:76198388-76198407 | None:intergenic | 20.0% |
| !!! | ATTTTCATTCTAGATTACTT+AGG | - | chr3_4:76198480-76198499 | Msa0522870:intron | 20.0% |
| !!! | AATACTTGATGATTAAATTC+AGG | - | chr3_4:76198852-76198871 | Msa0522870:CDS | 20.0% |
| !!! | TCTTTAGAAAATTCAACATT+TGG | + | chr3_4:76199098-76199117 | None:intergenic | 20.0% |
| !!! | AAATGTTGAATTTTCTAAAG+AGG | - | chr3_4:76199097-76199116 | Msa0522870:CDS | 20.0% |
| !! | TTTACAGATAATGTATTCTT+AGG | - | chr3_4:76200379-76200398 | Msa0522870:intron | 20.0% |
| !! | TTACATAGTTTAAACATCTT+AGG | - | chr3_4:76200566-76200585 | Msa0522870:intron | 20.0% |
| !! | AAGTGTTTCATGTAATAAAA+AGG | - | chr3_4:76200671-76200690 | Msa0522870:intron | 20.0% |
| !!! | TTTCTTACTAAAGAACTTTT+AGG | + | chr3_4:76200941-76200960 | None:intergenic | 20.0% |
| !! | TAAAAGTTCTTTAGTAAGAA+AGG | - | chr3_4:76200940-76200959 | Msa0522870:intron | 20.0% |
| ! | CGGAATTTATAGTTGTTAAT+GGG | + | chr3_4:76197023-76197042 | None:intergenic | 25.0% |
| ! | ACGGAATTTATAGTTGTTAA+TGG | + | chr3_4:76197024-76197043 | None:intergenic | 25.0% |
| !! | ATATATCCCTTGTTTATTTG+TGG | - | chr3_4:76197814-76197833 | Msa0522870:intron | 25.0% |
| ! | TTCGAATATTTAGATGAGAA+AGG | - | chr3_4:76197860-76197879 | Msa0522870:intron | 25.0% |
| ! | TCGAATATTTAGATGAGAAA+GGG | - | chr3_4:76197861-76197880 | Msa0522870:intron | 25.0% |
| ! | CATAAATATATTCTAGGTCT+AGG | + | chr3_4:76198362-76198381 | None:intergenic | 25.0% |
| ! | GGGATACATAAATATATTCT+AGG | + | chr3_4:76198368-76198387 | None:intergenic | 25.0% |
| ! | GAAATAACCAAACAAAAAAC+TGG | + | chr3_4:76198389-76198408 | None:intergenic | 25.0% |
| !! | TGTTTGGTTATTTCATCAAT+TGG | - | chr3_4:76198395-76198414 | Msa0522870:intron | 25.0% |
| !! | ATTTATGATTTGCAAACAAG+AGG | + | chr3_4:76198460-76198479 | None:intergenic | 25.0% |
| ! | TAGATTACTTAGGTTCTTTA+AGG | - | chr3_4:76198490-76198509 | Msa0522870:intron | 25.0% |
| ! | GTTTATTTATGACTAGCAAA+TGG | + | chr3_4:76198684-76198703 | None:intergenic | 25.0% |
| !! | AGAAATTTTCAGAAGGAAAA+GGG | - | chr3_4:76198950-76198969 | Msa0522870:intron | 25.0% |
| !! | TGAATTATATTAGGTGCTTT+TGG | - | chr3_4:76199661-76199680 | Msa0522870:CDS | 25.0% |
| ! | ATAAATGTGTACACAAATGT+TGG | + | chr3_4:76199752-76199771 | None:intergenic | 25.0% |
| ! | TTTGAGAAGTTTATTCGAAA+TGG | - | chr3_4:76200038-76200057 | Msa0522870:intron | 25.0% |
| !! | GTTTTATATCAACTGCTTAA+TGG | - | chr3_4:76200060-76200079 | Msa0522870:intron | 25.0% |
| !! | AACTTTAGAGAAATCCTAAT+TGG | - | chr3_4:76200214-76200233 | Msa0522870:intron | 25.0% |
| !!! | TAAGACAACTTTTGTTTGAA+TGG | - | chr3_4:76200455-76200474 | Msa0522870:intron | 25.0% |
| ! | TGTTTAAACTATGTAACTTG+TGG | + | chr3_4:76200562-76200581 | None:intergenic | 25.0% |
| ! | AGGTCAAATGTTAAAAAAGA+TGG | - | chr3_4:76200586-76200605 | Msa0522870:intron | 25.0% |
| ! | AGATGTAAACATTTGATTCA+AGG | - | chr3_4:76200621-76200640 | Msa0522870:intron | 25.0% |
| ! | TTTATTACATGAAACACTTG+AGG | + | chr3_4:76200670-76200689 | None:intergenic | 25.0% |
| ATGAAGTTCGAAAGTGAAAT+TGG | + | chr3_4:76196980-76196999 | None:intergenic | 30.0% | |
| TTAATGGGAGAGAAGTAAAA+TGG | + | chr3_4:76197008-76197027 | None:intergenic | 30.0% | |
| ATCATCGAAGAAAGTAGAAA+CGG | + | chr3_4:76197063-76197082 | None:intergenic | 30.0% | |
| GTAGTAATTAGAGAACTTGT+AGG | + | chr3_4:76197332-76197351 | None:intergenic | 30.0% | |
| AACCAAAATCCATGTTTATG+AGG | + | chr3_4:76197457-76197476 | None:intergenic | 30.0% | |
| !! | TCATAAACATGGATTTTGGT+TGG | - | chr3_4:76197456-76197475 | Msa0522870:intron | 30.0% |
| GTGATGAGTTAACTAATAGA+AGG | + | chr3_4:76197570-76197589 | None:intergenic | 30.0% | |
| CAGAGATCCATTAATATCAA+TGG | - | chr3_4:76197594-76197613 | Msa0522870:intron | 30.0% | |
| ! | CTTTTGGCCATTGATATTAA+TGG | + | chr3_4:76197604-76197623 | None:intergenic | 30.0% |
| AAATTGTGAAGGACCAAATT+GGG | + | chr3_4:76197690-76197709 | None:intergenic | 30.0% | |
| AAAATTGTGAAGGACCAAAT+TGG | + | chr3_4:76197691-76197710 | None:intergenic | 30.0% | |
| AAATCCAGATCATTCAATCT+TGG | - | chr3_4:76197790-76197809 | Msa0522870:intron | 30.0% | |
| TATTCCAAGATTGAATGATC+TGG | + | chr3_4:76197797-76197816 | None:intergenic | 30.0% | |
| AACTGACCACAAATAAACAA+GGG | + | chr3_4:76197823-76197842 | None:intergenic | 30.0% | |
| TCATATATTGCATTTGCAAG+AGG | - | chr3_4:76197954-76197973 | Msa0522870:intron | 30.0% | |
| TTTAAATGATGCACCCAAAT+TGG | - | chr3_4:76198066-76198085 | Msa0522870:intron | 30.0% | |
| TTTGAGAACTACCATTACTT+AGG | - | chr3_4:76198165-76198184 | Msa0522870:CDS | 30.0% | |
| ACCATTACTTAGGACATTTA+AGG | - | chr3_4:76198175-76198194 | Msa0522870:intron | 30.0% | |
| !! | TACTTTTCGAACAAGTATTG+TGG | + | chr3_4:76198300-76198319 | None:intergenic | 30.0% |
| !!! | ATGTATCCCAGTTTTTTGTT+TGG | - | chr3_4:76198379-76198398 | Msa0522870:intron | 30.0% |
| GCTCAACTACAAATTAAGAA+AGG | + | chr3_4:76198530-76198549 | None:intergenic | 30.0% | |
| ! | TAATTTGTAGTTGAGCATTG+TGG | - | chr3_4:76198534-76198553 | Msa0522870:intron | 30.0% |
| TCTTCATAAACTATATCCAG+AGG | + | chr3_4:76198658-76198677 | None:intergenic | 30.0% | |
| AAATAACATCTTAGAGCAAG+TGG | + | chr3_4:76198729-76198748 | None:intergenic | 30.0% | |
| TATCTACTGTACAATTATGC+AGG | + | chr3_4:76198771-76198790 | None:intergenic | 30.0% | |
| ! | CAGAAATTTTCAGAAGGAAA+AGG | - | chr3_4:76198949-76198968 | Msa0522870:intron | 30.0% |
| TAGAAAATTCAACATTTGGC+AGG | + | chr3_4:76199094-76199113 | None:intergenic | 30.0% | |
| ! | GAATCTGATGATGAACTTAA+TGG | - | chr3_4:76199140-76199159 | Msa0522870:CDS | 30.0% |
| ATTGTACACAGATTAGACAA+AGG | - | chr3_4:76199233-76199252 | Msa0522870:CDS | 30.0% | |
| TATCAAGGCATACAAATACT+GGG | + | chr3_4:76199383-76199402 | None:intergenic | 30.0% | |
| ATATCAAGGCATACAAATAC+TGG | + | chr3_4:76199384-76199403 | None:intergenic | 30.0% | |
| TATTTGTATGCCTTGATATC+AGG | - | chr3_4:76199385-76199404 | Msa0522870:intron | 30.0% | |
| CCTACAGGTTAAAAGTTAAA+TGG | + | chr3_4:76199802-76199821 | None:intergenic | 30.0% | |
| !! | CCATTTAACTTTTAACCTGT+AGG | - | chr3_4:76199799-76199818 | Msa0522870:intron | 30.0% |
| TTTATAAGCTAATGACCTAC+AGG | + | chr3_4:76199817-76199836 | None:intergenic | 30.0% | |
| !! | TTTTAAGTGAGTGCAAACTA+TGG | + | chr3_4:76199868-76199887 | None:intergenic | 30.0% |
| ! | AAAGTTGATTACTAACTGTC+AGG | - | chr3_4:76200098-76200117 | Msa0522870:intron | 30.0% |
| AAAGTAATTGAGATACTTGC+TGG | - | chr3_4:76200124-76200143 | Msa0522870:intron | 30.0% | |
| AAGTAATTGAGATACTTGCT+GGG | - | chr3_4:76200125-76200144 | Msa0522870:intron | 30.0% | |
| ACAACAAGATTATGCCAATT+AGG | + | chr3_4:76200231-76200250 | None:intergenic | 30.0% | |
| TTGTAAGTGAGAGAACTAAA+GGG | - | chr3_4:76200247-76200266 | Msa0522870:intron | 30.0% | |
| ACATTGCATAGATGTACTAA+CGG | - | chr3_4:76200321-76200340 | Msa0522870:intron | 30.0% | |
| ACAGATAATGTATTCTTAGG+TGG | - | chr3_4:76200382-76200401 | Msa0522870:intron | 30.0% | |
| AAGAAAAAACCCTAGCTTAA+AGG | - | chr3_4:76200513-76200532 | Msa0522870:intron | 30.0% | |
| ! | CAACTTTTACCTTTAAGCTA+GGG | + | chr3_4:76200525-76200544 | None:intergenic | 30.0% |
| ! | ATGTAACTTGTGGTATTGTA+TGG | + | chr3_4:76200552-76200571 | None:intergenic | 30.0% |
| TAAAAAAGATGGAGAAACAG+AGG | - | chr3_4:76200597-76200616 | Msa0522870:intron | 30.0% | |
| AAAAAAGATGGAGAAACAGA+GGG | - | chr3_4:76200598-76200617 | Msa0522870:intron | 30.0% | |
| GTAAACATTTGATTCAAGGA+AGG | - | chr3_4:76200625-76200644 | Msa0522870:intron | 30.0% | |
| GAATGAGTGAAAATACTACA+CGG | - | chr3_4:76200816-76200835 | Msa0522870:intron | 30.0% | |
| AATGAGTGAAAATACTACAC+GGG | - | chr3_4:76200817-76200836 | Msa0522870:intron | 30.0% | |
| TTAGCATTCAAGCAATAGTT+GGG | - | chr3_4:76200855-76200874 | Msa0522870:intron | 30.0% | |
| TGGGTCTATTGTGTAAAAAT+TGG | - | chr3_4:76200874-76200893 | Msa0522870:intron | 30.0% | |
| AAGAAAGGTAGATTAGATCA+AGG | - | chr3_4:76200955-76200974 | Msa0522870:intron | 30.0% | |
| TAGGCTTTACTATATTACAG+TGG | + | chr3_4:76201212-76201231 | None:intergenic | 30.0% | |
| ! | AAGTTTTCATTTCAAAGCCG+CGG | - | chr3_4:76196866-76196885 | Msa0522870:CDS | 35.0% |
| ! | TTGGAATGCTTTTGTTGCTA+TGG | + | chr3_4:76196961-76196980 | None:intergenic | 35.0% |
| TTCGATGATTCAAACTCCAA+AGG | - | chr3_4:76197074-76197093 | Msa0522870:intron | 35.0% | |
| !!! | ATTCGATTTTGGTTCTCCTT+TGG | + | chr3_4:76197093-76197112 | None:intergenic | 35.0% |
| GAAAATTGAGACTCGATAGT+TGG | - | chr3_4:76197168-76197187 | Msa0522870:intron | 35.0% | |
| AGACTACCTTATCAACAACA+CGG | + | chr3_4:76197271-76197290 | None:intergenic | 35.0% | |
| CAAATTCGGAACAGTTGAAA+TGG | + | chr3_4:76197307-76197326 | None:intergenic | 35.0% | |
| AGAACTTGTAGGCACAAATT+CGG | + | chr3_4:76197321-76197340 | None:intergenic | 35.0% | |
| AAATCCATGTTTATGAGGCT+GGG | + | chr3_4:76197452-76197471 | None:intergenic | 35.0% | |
| AAAATCCATGTTTATGAGGC+TGG | + | chr3_4:76197453-76197472 | None:intergenic | 35.0% | |
| ! | AGCCTCATAAACATGGATTT+TGG | - | chr3_4:76197452-76197471 | Msa0522870:intron | 35.0% |
| !!! | AACATGGATTTTGGTTGGTT+AGG | - | chr3_4:76197461-76197480 | Msa0522870:intron | 35.0% |
| ! | TTTAGAGTGAAGACCCAATT+TGG | - | chr3_4:76197674-76197693 | Msa0522870:intron | 35.0% |
| CCTCTGTTTATAATGAGTCA+GGG | + | chr3_4:76197733-76197752 | None:intergenic | 35.0% | |
| CCTGACTCATTATAAACAGA+GGG | - | chr3_4:76197731-76197750 | Msa0522870:intron | 35.0% | |
| CTCATTATAAACAGAGGGAT+TGG | - | chr3_4:76197736-76197755 | Msa0522870:intron | 35.0% | |
| GAACTGACCACAAATAAACA+AGG | + | chr3_4:76197824-76197843 | None:intergenic | 35.0% | |
| ! | TATAGCTCTTGTTTGAGTCT+AGG | - | chr3_4:76197904-76197923 | Msa0522870:intron | 35.0% |
| ! | ATAGCTCTTGTTTGAGTCTA+GGG | - | chr3_4:76197905-76197924 | Msa0522870:intron | 35.0% |
| GAAGTCATAGATTCAAGTCA+TGG | + | chr3_4:76197986-76198005 | None:intergenic | 35.0% | |
| CAAGGAAAGACTTCCAATTT+GGG | + | chr3_4:76198082-76198101 | None:intergenic | 35.0% | |
| !! | ACTAGGAGATTATTTCTGCA+AGG | + | chr3_4:76198100-76198119 | None:intergenic | 35.0% |
| TTACAGATGTAGTCTCAACT+AGG | + | chr3_4:76198117-76198136 | None:intergenic | 35.0% | |
| GCCTTAAATGTCCTAAGTAA+TGG | + | chr3_4:76198179-76198198 | None:intergenic | 35.0% | |
| TTTCTTTCAATGTCAGAGCT+GGG | - | chr3_4:76198572-76198591 | Msa0522870:intron | 35.0% | |
| TGAGATCAAATGTACGATTG+CGG | - | chr3_4:76198597-76198616 | Msa0522870:intron | 35.0% | |
| !! | ATATCCAGAGGTATGTTTTC+CGG | + | chr3_4:76198646-76198665 | None:intergenic | 35.0% |
| CATAAATAAACCTGCTCACA+TGG | - | chr3_4:76198693-76198712 | Msa0522870:intron | 35.0% | |
| !!! | AGATAGTGCGACACTTTTTT+TGG | - | chr3_4:76198786-76198805 | Msa0522870:CDS | 35.0% |
| ! | CCTTCTGAAAATTTCTGACA+TGG | + | chr3_4:76198946-76198965 | None:intergenic | 35.0% |
| ! | CCATGTCAGAAATTTTCAGA+AGG | - | chr3_4:76198943-76198962 | Msa0522870:intron | 35.0% |
| CATTATATGCTCTTCAACCT+AGG | - | chr3_4:76199004-76199023 | Msa0522870:intron | 35.0% | |
| GTTAGATTCTAGATTGTCTG+TGG | - | chr3_4:76199193-76199212 | Msa0522870:CDS | 35.0% | |
| GAATGTTCATCCTGATATCA+AGG | + | chr3_4:76199398-76199417 | None:intergenic | 35.0% | |
| ! | AGTAATTGAGATACTTGCTG+GGG | - | chr3_4:76200126-76200145 | Msa0522870:intron | 35.0% |
| GTTGTAAGTGAGAGAACTAA+AGG | - | chr3_4:76200246-76200265 | Msa0522870:intron | 35.0% | |
| TAGTACATCTATGCAATGTC+CGG | + | chr3_4:76200320-76200339 | None:intergenic | 35.0% | |
| !!! | AGCTAGGGTTTTTTCTTCTT+TGG | + | chr3_4:76200510-76200529 | None:intergenic | 35.0% |
| ! | CCAACTTTTACCTTTAAGCT+AGG | + | chr3_4:76200526-76200545 | None:intergenic | 35.0% |
| CCTAGCTTAAAGGTAAAAGT+TGG | - | chr3_4:76200523-76200542 | Msa0522870:intron | 35.0% | |
| AACATTTGATTCAAGGAAGG+TGG | - | chr3_4:76200628-76200647 | Msa0522870:intron | 35.0% | |
| TTGATCGATAAAATGTTCCC+TGG | + | chr3_4:76200708-76200727 | None:intergenic | 35.0% | |
| GTATGAGAATGAGTGTTTGA+TGG | - | chr3_4:76200740-76200759 | Msa0522870:intron | 35.0% | |
| ATACTACACGGGATATGATT+AGG | - | chr3_4:76200828-76200847 | Msa0522870:intron | 35.0% | |
| GTTAGCATTCAAGCAATAGT+TGG | - | chr3_4:76200854-76200873 | Msa0522870:intron | 35.0% | |
| ! | TTTTGCCTTTAGTGATTGAG+TGG | + | chr3_4:76200982-76201001 | None:intergenic | 35.0% |
| AGATTTAGAGGACAATGCTT+TGG | - | chr3_4:76201037-76201056 | Msa0522870:CDS | 35.0% | |
| AACATTTCGCTATGCAAACT+CGG | + | chr3_4:76201378-76201397 | None:intergenic | 35.0% | |
| AAACAGTTTCTGAGCTAGAT+AGG | - | chr3_4:76201400-76201419 | Msa0522870:CDS | 35.0% | |
| TTATCGCTTAACACCTCATG+TGG | - | chr3_4:76196921-76196940 | Msa0522870:CDS | 40.0% | |
| ! | AACACCTCATGTGGATTTTG+CGG | - | chr3_4:76196930-76196949 | Msa0522870:CDS | 40.0% |
| ! | AGTAGAAACGGATTTCGCAA+TGG | + | chr3_4:76197051-76197070 | None:intergenic | 40.0% |
| GAACCAAAATCGAATTACGC+CGG | - | chr3_4:76197098-76197117 | Msa0522870:intron | 40.0% | |
| TGGATTTCTTCTCGCATCAA+TGG | - | chr3_4:76197188-76197207 | Msa0522870:intron | 40.0% | |
| GTCCAGTCAAGTATTAAAGC+TGG | - | chr3_4:76197227-76197246 | Msa0522870:intron | 40.0% | |
| ! | GTCCAGCTTTAATACTTGAC+TGG | + | chr3_4:76197232-76197251 | None:intergenic | 40.0% |
| CCTCCTTTCTCTTCTAAATG+CGG | - | chr3_4:76197422-76197441 | Msa0522870:intron | 40.0% | |
| CTCCTTTCTCTTCTAAATGC+GGG | - | chr3_4:76197423-76197442 | Msa0522870:intron | 40.0% | |
| TACCCGCATTTAGAAGAGAA+AGG | + | chr3_4:76197428-76197447 | None:intergenic | 40.0% | |
| GTTGGTTAGGAAGATCTAGA+GGG | - | chr3_4:76197474-76197493 | Msa0522870:intron | 40.0% | |
| GCATATCATCTGGAGAAGAA+GGG | - | chr3_4:76197496-76197515 | Msa0522870:intron | 40.0% | |
| !!! | GGCTGGTTTTAATGTGTATG+TGG | - | chr3_4:76197544-76197563 | Msa0522870:intron | 40.0% |
| ! | TCCTTCACAATTTTATGCCG+AGG | - | chr3_4:76197697-76197716 | Msa0522870:intron | 40.0% |
| TCCTCGGCATAAAATTGTGA+AGG | + | chr3_4:76197701-76197720 | None:intergenic | 40.0% | |
| CCCTGACTCATTATAAACAG+AGG | - | chr3_4:76197730-76197749 | Msa0522870:intron | 40.0% | |
| CCCTCTGTTTATAATGAGTC+AGG | + | chr3_4:76197734-76197753 | None:intergenic | 40.0% | |
| TTTAGATGAGAAAGGGCAAC+AGG | - | chr3_4:76197868-76197887 | Msa0522870:intron | 40.0% | |
| ACTGTACAATAGACCCACAA+TGG | + | chr3_4:76197935-76197954 | None:intergenic | 40.0% | |
| AAGAATGGAAGTCTTGCAGT+TGG | + | chr3_4:76198041-76198060 | None:intergenic | 40.0% | |
| GCAAGGAAAGACTTCCAATT+TGG | + | chr3_4:76198083-76198102 | None:intergenic | 40.0% | |
| TGAGACTACATCTGTAATGC+TGG | - | chr3_4:76198120-76198139 | Msa0522870:CDS | 40.0% | |
| AGTCACTAACTGCAACAAGA+TGG | + | chr3_4:76198146-76198165 | None:intergenic | 40.0% | |
| ! | TAGATCAAGTGTTGTGCTGA+AGG | - | chr3_4:76198256-76198275 | Msa0522870:intron | 40.0% |
| !! | GGCATGCTTTAGAATCATCT+TGG | + | chr3_4:76198340-76198359 | None:intergenic | 40.0% |
| GTTTCTTTCAATGTCAGAGC+TGG | - | chr3_4:76198571-76198590 | Msa0522870:intron | 40.0% | |
| TTCTTTCAATGTCAGAGCTG+GGG | - | chr3_4:76198573-76198592 | Msa0522870:intron | 40.0% | |
| ACATCTTAGAGCAAGTGGTT+CGG | + | chr3_4:76198724-76198743 | None:intergenic | 40.0% | |
| CTACTGTACAATTATGCAGG+TGG | + | chr3_4:76198768-76198787 | None:intergenic | 40.0% | |
| GCACTACAGAATAAAGTGGT+TGG | + | chr3_4:76198891-76198910 | None:intergenic | 40.0% | |
| CCTAGCACTACAGAATAAAG+TGG | + | chr3_4:76198895-76198914 | None:intergenic | 40.0% | |
| CCACTTTATTCTGTAGTGCT+AGG | - | chr3_4:76198892-76198911 | Msa0522870:intron | 40.0% | |
| CTAATCTGTGTACAATCCCT+GGG | + | chr3_4:76199229-76199248 | None:intergenic | 40.0% | |
| TCTAATCTGTGTACAATCCC+TGG | + | chr3_4:76199230-76199249 | None:intergenic | 40.0% | |
| ATCATACGAAGCCGGTTATT+AGG | + | chr3_4:76199539-76199558 | None:intergenic | 40.0% | |
| AGTTGAAAATCCCTTCTGTG+TGG | - | chr3_4:76199775-76199794 | Msa0522870:intron | 40.0% | |
| GTTAAATGGACCACACAGAA+GGG | + | chr3_4:76199788-76199807 | None:intergenic | 40.0% | |
| AGTTAAATGGACCACACAGA+AGG | + | chr3_4:76199789-76199808 | None:intergenic | 40.0% | |
| ! | GTAATTGAGATACTTGCTGG+GGG | - | chr3_4:76200127-76200146 | Msa0522870:intron | 40.0% |
| TTGAGTGGAAGTTGGAAACT+GGG | - | chr3_4:76200164-76200183 | Msa0522870:intron | 40.0% | |
| TTTACCATCGGAGTAAAACG+TGG | - | chr3_4:76200280-76200299 | Msa0522870:intron | 40.0% | |
| AAAACGTGGCCAAATTTCCA+TGG | - | chr3_4:76200294-76200313 | Msa0522870:intron | 40.0% | |
| ! | AAAAGCATGCTGCAAAGTGT+TGG | + | chr3_4:76200361-76200380 | None:intergenic | 40.0% |
| GAGAGTCGAGAGGAAATAAA+TGG | - | chr3_4:76200404-76200423 | Msa0522870:intron | 40.0% | |
| GTCGAGAGGAAATAAATGGA+AGG | - | chr3_4:76200408-76200427 | Msa0522870:intron | 40.0% | |
| TAAATGGAAGGTTAGAGACG+TGG | - | chr3_4:76200420-76200439 | Msa0522870:intron | 40.0% | |
| TTCAAGGAAGGTGGTTGAAA+TGG | - | chr3_4:76200637-76200656 | Msa0522870:intron | 40.0% | |
| ! | AAAAAGGTACAACTCAAGCC+AGG | - | chr3_4:76200687-76200706 | Msa0522870:intron | 40.0% |
| ! | AAAAGGTACAACTCAAGCCA+GGG | - | chr3_4:76200688-76200707 | Msa0522870:intron | 40.0% |
| GAATCTCAACCTAGATCGTT+TGG | - | chr3_4:76200899-76200918 | Msa0522870:intron | 40.0% | |
| AAGGACCACTCAATCACTAA+AGG | - | chr3_4:76200974-76200993 | Msa0522870:intron | 40.0% | |
| !! | CAAGTCTTATTCCACTAGGT+GGG | + | chr3_4:76201118-76201137 | None:intergenic | 40.0% |
| !! | AGACCAAGTCTTATTCCACT+AGG | + | chr3_4:76201122-76201141 | None:intergenic | 40.0% |
| TAGGTGATGAGGTATATGGA+GGG | - | chr3_4:76201310-76201329 | Msa0522870:CDS | 40.0% | |
| CTCACTAGATAGAACTTCCG+CGG | + | chr3_4:76196886-76196905 | None:intergenic | 45.0% | |
| AACACCGCAAAATCCACATG+AGG | + | chr3_4:76196937-76196956 | None:intergenic | 45.0% | |
| ! | AGAAACGGATTTCGCAATGG+AGG | + | chr3_4:76197048-76197067 | None:intergenic | 45.0% |
| ! | GAAGAAATCGTCGACTACGA+CGG | - | chr3_4:76197131-76197150 | Msa0522870:intron | 45.0% |
| TACGACGGTGGAATCAAATC+TGG | - | chr3_4:76197146-76197165 | Msa0522870:intron | 45.0% | |
| ! | CAATGGCCGTGTTGTTGATA+AGG | - | chr3_4:76197262-76197281 | Msa0522870:intron | 45.0% |
| CCGCATTTAGAAGAGAAAGG+AGG | + | chr3_4:76197425-76197444 | None:intergenic | 45.0% | |
| GTAACCCAGCCTCATAAACA+TGG | - | chr3_4:76197445-76197464 | Msa0522870:intron | 45.0% | |
| ! | GGTTGGTTAGGAAGATCTAG+AGG | - | chr3_4:76197473-76197492 | Msa0522870:intron | 45.0% |
| ! | GATCTAGAGGGCATATCATC+TGG | - | chr3_4:76197486-76197505 | Msa0522870:intron | 45.0% |
| GGCATATCATCTGGAGAAGA+AGG | - | chr3_4:76197495-76197514 | Msa0522870:intron | 45.0% | |
| CTGGAGAAGAAGGGTTAAGT+TGG | - | chr3_4:76197505-76197524 | Msa0522870:intron | 45.0% | |
| !! | TTAAGTTGGCATGCCAACCT+AGG | - | chr3_4:76197519-76197538 | Msa0522870:intron | 45.0% |
| ACATTAAAACCAGCCTGCCT+AGG | + | chr3_4:76197539-76197558 | None:intergenic | 45.0% | |
| ! | GTCAGGGACTAATTTGTCCT+CGG | + | chr3_4:76197717-76197736 | None:intergenic | 45.0% |
| AGTTGTGCAGTGTGCACTAA+AGG | + | chr3_4:76197768-76197787 | None:intergenic | 45.0% | |
| AACAAGAGCTATACAGCACC+AGG | + | chr3_4:76197897-76197916 | None:intergenic | 45.0% | |
| ! | AGTCTAGGGCAAACCATTGT+GGG | - | chr3_4:76197919-76197938 | Msa0522870:intron | 45.0% |
| CTTGCAGTTGGCAAAGTGAT+AGG | + | chr3_4:76198029-76198048 | None:intergenic | 45.0% | |
| CATTGTGGTGATACTTGAGC+AGG | - | chr3_4:76198549-76198568 | Msa0522870:intron | 45.0% | |
| TTCGGAATTACCATGTGAGC+AGG | + | chr3_4:76198706-76198725 | None:intergenic | 45.0% | |
| ! | ACGTCTGGGACACTTGTAAA+TGG | - | chr3_4:76199050-76199069 | Msa0522870:CDS | 45.0% |
| CAACATTTGGCAGGTTGCAA+TGG | + | chr3_4:76199085-76199104 | None:intergenic | 45.0% | |
| TCCCAGTCAAGTTCTTCTGA+AGG | - | chr3_4:76199170-76199189 | Msa0522870:CDS | 45.0% | |
| CCCTTCAGAAGAACTTGACT+GGG | + | chr3_4:76199174-76199193 | None:intergenic | 45.0% | |
| CCCAGTCAAGTTCTTCTGAA+GGG | - | chr3_4:76199171-76199190 | Msa0522870:CDS | 45.0% | |
| ACCCTTCAGAAGAACTTGAC+TGG | + | chr3_4:76199175-76199194 | None:intergenic | 45.0% | |
| ! | AGATTAGACAAAGGCACGAG+TGG | - | chr3_4:76199242-76199261 | Msa0522870:CDS | 45.0% |
| ! | GATTAGACAAAGGCACGAGT+GGG | - | chr3_4:76199243-76199262 | Msa0522870:CDS | 45.0% |
| TGGGTTACTAGTTGTCGCTA+AGG | - | chr3_4:76199262-76199281 | Msa0522870:CDS | 45.0% | |
| TCAAGCTACGCACTATCAAG+AGG | - | chr3_4:76199441-76199460 | Msa0522870:intron | 45.0% | |
| CAAGCTACGCACTATCAAGA+GGG | - | chr3_4:76199442-76199461 | Msa0522870:intron | 45.0% | |
| TTATTAGGATCACGGCCAAC+AGG | + | chr3_4:76199524-76199543 | None:intergenic | 45.0% | |
| TTGGCCGTGATCCTAATAAC+CGG | - | chr3_4:76199525-76199544 | Msa0522870:intron | 45.0% | |
| GAAGCCGGTTATTAGGATCA+CGG | + | chr3_4:76199532-76199551 | None:intergenic | 45.0% | |
| TGCGGCTAGTAGGTGATTTA+TGG | - | chr3_4:76199598-76199617 | Msa0522870:CDS | 45.0% | |
| TGAGTGCAAACTATGGAGCA+TGG | + | chr3_4:76199861-76199880 | None:intergenic | 45.0% | |
| !! | TGCATTGGTTGAGTGGAAGT+TGG | - | chr3_4:76200156-76200175 | Msa0522870:intron | 45.0% |
| GTTGAGTGGAAGTTGGAAAC+TGG | - | chr3_4:76200163-76200182 | Msa0522870:intron | 45.0% | |
| AATGTCCGGCCATGGAAATT+TGG | + | chr3_4:76200306-76200325 | None:intergenic | 45.0% | |
| AAGGAAGGTGGTTGAAATGG+AGG | - | chr3_4:76200640-76200659 | Msa0522870:intron | 45.0% | |
| AAGGTGGTTGAAATGGAGGA+GGG | - | chr3_4:76200644-76200663 | Msa0522870:intron | 45.0% | |
| CACACATGACCAAACGATCT+AGG | + | chr3_4:76200911-76200930 | None:intergenic | 45.0% | |
| CTAGATCGTTTGGTCATGTG+TGG | - | chr3_4:76200909-76200928 | Msa0522870:intron | 45.0% | |
| ATGTTGTCAATCCCACCTAG+TGG | - | chr3_4:76201104-76201123 | Msa0522870:CDS | 45.0% | |
| !! | CCAAGTCTTATTCCACTAGG+TGG | + | chr3_4:76201119-76201138 | None:intergenic | 45.0% |
| CCACCTAGTGGAATAAGACT+TGG | - | chr3_4:76201116-76201135 | Msa0522870:CDS | 45.0% | |
| ! | CAGAGGTACACCCAAATACT+TGG | + | chr3_4:76201289-76201308 | None:intergenic | 45.0% |
| TATTTGGGTGTACCTCTGCT+AGG | - | chr3_4:76201291-76201310 | Msa0522870:CDS | 45.0% | |
| TATACCTCATCACCTAGCAG+AGG | + | chr3_4:76201306-76201325 | None:intergenic | 45.0% | |
| CTGCTAGGTGATGAGGTATA+TGG | - | chr3_4:76201306-76201325 | Msa0522870:CDS | 45.0% | |
| CTAGGTGATGAGGTATATGG+AGG | - | chr3_4:76201309-76201328 | Msa0522870:CDS | 45.0% | |
| ATATGGAGGGACGAAAAGCA+TGG | - | chr3_4:76201323-76201342 | Msa0522870:CDS | 45.0% | |
| !! | GCATGGTCTTGTCATTGCTA+CGG | - | chr3_4:76201340-76201359 | Msa0522870:CDS | 45.0% |
| AGAGTCAAAGCATGAAGGCA+AGG | + | chr3_4:76201426-76201445 | None:intergenic | 45.0% | |
| TGCCTTCATGCTTTGACTCT+CGG | - | chr3_4:76201426-76201445 | Msa0522870:CDS | 45.0% | |
| CGGATTTCGCAATGGAGGAA+CGG | + | chr3_4:76197043-76197062 | None:intergenic | 50.0% | |
| ! | ACGCCGGCGTAATTCGATTT+TGG | + | chr3_4:76197104-76197123 | None:intergenic | 50.0% |
| GCTGGACTCGTTCATGTCAA+TGG | - | chr3_4:76197245-76197264 | Msa0522870:intron | 50.0% | |
| TAAAACCAGCCTGCCTAGGT+TGG | + | chr3_4:76197535-76197554 | None:intergenic | 50.0% | |
| ! | GAGTCTAGGGCAAACCATTG+TGG | - | chr3_4:76197918-76197937 | Msa0522870:intron | 50.0% |
| TGTGCCGGAAAACATACCTC+TGG | - | chr3_4:76198639-76198658 | Msa0522870:intron | 50.0% | |
| ! | GTCTACGTTAGTCTCACTGC+CGG | - | chr3_4:76199464-76199483 | Msa0522870:intron | 50.0% |
| ! | TCTACGTTAGTCTCACTGCC+GGG | - | chr3_4:76199465-76199484 | Msa0522870:intron | 50.0% |
| AGAAACTGGAGTAGGTACCC+CGG | + | chr3_4:76199486-76199505 | None:intergenic | 50.0% | |
| ACACGTCCAGAAACTGGAGT+AGG | + | chr3_4:76199494-76199513 | None:intergenic | 50.0% | |
| ! | TCCAGTTTCTGGACGTGTTG+AGG | - | chr3_4:76199496-76199515 | Msa0522870:intron | 50.0% |
| ACCTCAACACGTCCAGAAAC+TGG | + | chr3_4:76199500-76199519 | None:intergenic | 50.0% | |
| CTACAGCGATCATACGAAGC+CGG | + | chr3_4:76199547-76199566 | None:intergenic | 50.0% | |
| CTTCGTATGATCGCTGTAGC+TGG | - | chr3_4:76199548-76199567 | Msa0522870:intron | 50.0% | |
| TTCTGTGAAAGCCCGTCATG+CGG | - | chr3_4:76199580-76199599 | Msa0522870:intron | 50.0% | |
| ATCACCTACTAGCCGCATGA+CGG | + | chr3_4:76199595-76199614 | None:intergenic | 50.0% | |
| !! | GTAGCTGTGCATTGGTTGAG+TGG | - | chr3_4:76200149-76200168 | Msa0522870:intron | 50.0% |
| ! | GGTGCACTGCTGTTTACCAT+CGG | - | chr3_4:76200268-76200287 | Msa0522870:intron | 50.0% |
| ! | TTGGCCACGTTTTACTCCGA+TGG | + | chr3_4:76200287-76200306 | None:intergenic | 50.0% |
| ATCTATGCAATGTCCGGCCA+TGG | + | chr3_4:76200314-76200333 | None:intergenic | 50.0% | |
| TTCTTAGGTGGAGAGTCGAG+AGG | - | chr3_4:76200394-76200413 | Msa0522870:intron | 50.0% | |
| GAAGGTGGTTGAAATGGAGG+AGG | - | chr3_4:76200643-76200662 | Msa0522870:intron | 50.0% | |
| GATCGTTTGGTCATGTGTGG+AGG | - | chr3_4:76200912-76200931 | Msa0522870:intron | 50.0% | |
| TCGTGCGCATGCCAAGTATT+TGG | - | chr3_4:76201275-76201294 | Msa0522870:CDS | 50.0% | |
| CGTGCGCATGCCAAGTATTT+GGG | - | chr3_4:76201276-76201295 | Msa0522870:CDS | 50.0% | |
| TGTACCTCTGCTAGGTGATG+AGG | - | chr3_4:76201299-76201318 | Msa0522870:CDS | 50.0% | |
| TGCAAACTCGGAGTTGTTCG+TGG | + | chr3_4:76201366-76201385 | None:intergenic | 50.0% | |
| GCCTTCATGCTTTGACTCTC+GGG | - | chr3_4:76201427-76201446 | Msa0522870:CDS | 50.0% | |
| ACCCGAGAGTCAAAGCATGA+AGG | + | chr3_4:76201431-76201450 | None:intergenic | 50.0% | |
| AATCGAATTACGCCGGCGTG+CGG | - | chr3_4:76197105-76197124 | Msa0522870:intron | 55.0% | |
| GATTTCTTCCAACCGCACGC+CGG | + | chr3_4:76197120-76197139 | None:intergenic | 55.0% | |
| ! | GAAATCGTCGACTACGACGG+TGG | - | chr3_4:76197134-76197153 | Msa0522870:intron | 55.0% |
| AGAAAGGGCAACAGGCAACC+TGG | - | chr3_4:76197876-76197895 | Msa0522870:intron | 55.0% | |
| !! | AGGTGCTGGATGCACAACCT+AGG | + | chr3_4:76199024-76199043 | None:intergenic | 55.0% |
| TAGGTTGTGCATCCAGCACC+TGG | - | chr3_4:76199023-76199042 | Msa0522870:intron | 55.0% | |
| CAGCACCTGGCAATACGTCT+GGG | - | chr3_4:76199036-76199055 | Msa0522870:CDS | 55.0% | |
| AGTGTCCCAGACGTATTGCC+AGG | + | chr3_4:76199044-76199063 | None:intergenic | 55.0% | |
| TCTGTGGCATCAATTCGCCC+AGG | - | chr3_4:76199209-76199228 | Msa0522870:CDS | 55.0% | |
| CTGTGGCATCAATTCGCCCA+GGG | - | chr3_4:76199210-76199229 | Msa0522870:CDS | 55.0% | |
| ! | CTACGTTAGTCTCACTGCCG+GGG | - | chr3_4:76199466-76199485 | Msa0522870:intron | 55.0% |
| ! | GGGGTACCTACTCCAGTTTC+TGG | - | chr3_4:76199485-76199504 | Msa0522870:intron | 55.0% |
| GGACGTGTTGAGGTTCCTGT+TGG | - | chr3_4:76199506-76199525 | Msa0522870:intron | 55.0% | |
| TCACCTACTAGCCGCATGAC+GGG | + | chr3_4:76199594-76199613 | None:intergenic | 55.0% | |
| CGTGGCCAAATTTCCATGGC+CGG | - | chr3_4:76200298-76200317 | Msa0522870:intron | 55.0% | |
| GTTGGCATGCCAACCTAGGC+AGG | - | chr3_4:76197523-76197542 | Msa0522870:intron | 60.0% | |
| GCAGCAGTTGAGAGCTGTGC+CGG | - | chr3_4:76198624-76198643 | Msa0522870:intron | 60.0% | |
| CCAGACGTATTGCCAGGTGC+TGG | + | chr3_4:76199038-76199057 | None:intergenic | 60.0% | |
| CCAGCACCTGGCAATACGTC+TGG | - | chr3_4:76199035-76199054 | Msa0522870:CDS | 60.0% | |
| AAGCCCGTCATGCGGCTAGT+AGG | - | chr3_4:76199588-76199607 | Msa0522870:intron | 60.0% | |
| TGCTGGGGGTAGCTGTGCAT+TGG | - | chr3_4:76200141-76200160 | Msa0522870:intron | 60.0% | |
| GGAAACTGGGCGCACTCATC+AGG | - | chr3_4:76200177-76200196 | Msa0522870:intron | 60.0% | |
| GAATTACGCCGGCGTGCGGT+TGG | - | chr3_4:76197109-76197128 | Msa0522870:intron | 65.0% | |
| GCATGCCAACCTAGGCAGGC+TGG | - | chr3_4:76197527-76197546 | Msa0522870:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 76196840 | 76201470 | 76196840 | ID=Msa0522870;Name=Msa0522870 |
| chr3_4 | mRNA | 76196840 | 76201470 | 76196840 | ID=Msa0522870-mRNA-1;Parent=Msa0522870;Name=Msa0522870-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|1|0.83|1|0.8|0.83|6|18|435 |
| chr3_4 | exon | 76196840 | 76197037 | 76196840 | ID=Msa0522870-mRNA-1:exon:22017;Parent=Msa0522870-mRNA-1 |
| chr3_4 | exon | 76198112 | 76198190 | 76198112 | ID=Msa0522870-mRNA-1:exon:22016;Parent=Msa0522870-mRNA-1 |
| chr3_4 | exon | 76198701 | 76198903 | 76198701 | ID=Msa0522870-mRNA-1:exon:22015;Parent=Msa0522870-mRNA-1 |
| chr3_4 | exon | 76199027 | 76199284 | 76199027 | ID=Msa0522870-mRNA-1:exon:22014;Parent=Msa0522870-mRNA-1 |
| chr3_4 | exon | 76199596 | 76199739 | 76199596 | ID=Msa0522870-mRNA-1:exon:22013;Parent=Msa0522870-mRNA-1 |
| chr3_4 | exon | 76201027 | 76201470 | 76201027 | ID=Msa0522870-mRNA-1:exon:22012;Parent=Msa0522870-mRNA-1 |
| chr3_4 | CDS | 76201027 | 76201470 | 76201027 | ID=Msa0522870-mRNA-1:cds;Parent=Msa0522870-mRNA-1 |
| chr3_4 | CDS | 76199596 | 76199739 | 76199596 | ID=Msa0522870-mRNA-1:cds;Parent=Msa0522870-mRNA-1 |
| chr3_4 | CDS | 76199027 | 76199284 | 76199027 | ID=Msa0522870-mRNA-1:cds;Parent=Msa0522870-mRNA-1 |
| chr3_4 | CDS | 76198701 | 76198903 | 76198701 | ID=Msa0522870-mRNA-1:cds;Parent=Msa0522870-mRNA-1 |
| chr3_4 | CDS | 76198112 | 76198190 | 76198112 | ID=Msa0522870-mRNA-1:cds;Parent=Msa0522870-mRNA-1 |
| chr3_4 | CDS | 76196858 | 76197037 | 76196858 | ID=Msa0522870-mRNA-1:cds;Parent=Msa0522870-mRNA-1 |
| chr3_4 | three_prime_UTR | 76196840 | 76196857 | 76196840 | ID=Msa0522870-mRNA-1:three_prime_utr;Parent=Msa0522870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
