AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1093250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1093250 MtrunA17_Chr7g0227021 74.627 67 15 1 1 65 56 122 3.49e-24 92.8
Msa1093250 MtrunA17_Chr7g0227021 74.545 55 14 0 31 85 61 115 1.73e-18 77.8
Msa1093250 MtrunA17_Chr7g0227021 53.409 88 37 2 115 201 35 119 1.07e-17 75.9
Msa1093250 MtrunA17_Chr7g0227021 52.564 78 21 1 101 178 61 122 2.56e-14 67.0
Msa1093250 MtrunA17_Chr7g0227021 56.522 69 14 1 58 126 61 113 4.27e-13 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 42 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTACCAGTGGAAACTTTA+CGG 0.311011 7_3:+12871846 Msa1093250:CDS
CTCTACCGGTGGAAACTTTA+CGG 0.314138 7_3:+12874733 Msa1093250:CDS
CTCTACCGGTGGAAACTTTA+CGG 0.318546 7_3:+12870212 Msa1093250:CDS
ATTATTAATGAAATATTGAT+TGG 0.359224 7_3:+12874692 Msa1093250:CDS
GATGGGCATCAAACCTCCTT+TGG 0.405616 7_3:+12872535 Msa1093250:intron
ATTATTAATGAAATATTGAA+TGG 0.411626 7_3:+12870171 Msa1093250:CDS
ATTATTAATGAAATATTGAA+TGG 0.411626 7_3:+12871805 Msa1093250:CDS
ATTATTAATGAAATATTGAA+TGG 0.411626 7_3:+12873464 Msa1093250:CDS
GATGAGCGTCAGACCTCCTT+TGG 0.447497 7_3:+12870906 Msa1093250:intron
CGTAAAGTTTCCACTGGTAG+AGG 0.452636 7_3:-12871845 None:intergenic
CGTAAAGTTTCCACCGGTAG+AGG 0.461897 7_3:-12874732 None:intergenic
CTCTTCCGTAAAGTTTCCAC+TGG 0.464929 7_3:-12871851 None:intergenic
GATGGGCATCATACCTCCTC+TGG 0.480394 7_3:+12867622 Msa1093250:CDS
CGTAAAGTTTCCACCGGTAG+AGG 0.485524 7_3:-12870211 None:intergenic
TGGAGGAAACTTCACGAAAG+AGG 0.504865 7_3:+12872555 Msa1093250:CDS
TTTCGTGAAGTTTCCTCCAA+AGG 0.509184 7_3:-12872551 None:intergenic
TGGTGGAAACTTCACGAAAG+AGG 0.511536 7_3:+12870926 Msa1093250:CDS
ATTAATGAAATATTGATTGG+TGG 0.520168 7_3:+12874695 Msa1093250:CDS
CTCTTCCGTAAAGTTTCCAC+CGG 0.525681 7_3:-12874738 None:intergenic
CGTGAAGTTTCCACCAAAGG+AGG 0.525767 7_3:-12870919 None:intergenic
TTTCGTGAAGTTTCCTCTAG+AGG 0.534036 7_3:-12875463 None:intergenic
TTTCGTGAAGTTTCCACCAA+AGG 0.536555 7_3:-12870922 None:intergenic
TAGAGGAAACTTCACGAAAG+AGG 0.538490 7_3:+12875467 Msa1093250:CDS
GAGCGTCAGACCTCCTTTGG+TGG 0.540225 7_3:+12870909 Msa1093250:CDS
TTCTGTGAAGTTTCCACCAG+AGG 0.545010 7_3:-12867638 None:intergenic
GGGCATCAAACCTCCTTTGG+AGG 0.549110 7_3:+12872538 Msa1093250:CDS
CTCTACCGTAAAGTTTCCAC+CGG 0.549346 7_3:-12870217 None:intergenic
CGTGAAGTTTCCTCCAAAGG+AGG 0.554900 7_3:-12872548 None:intergenic
GATCAACATCATACCTCTAC+CGG 0.556600 7_3:+12870198 Msa1093250:CDS
GATCAACATCATACCTCTAC+CGG 0.556600 7_3:+12873491 Msa1093250:CDS
GATCAACATCATACCTCTAC+CGG 0.556600 7_3:+12874719 Msa1093250:CDS
CGTGAAGTTTCCTCTAGAGG+AGG 0.566124 7_3:-12875460 None:intergenic
ATTAATGAAATATTGAATGG+TGG 0.571912 7_3:+12870174 Msa1093250:CDS
ATTAATGAAATATTGAATGG+TGG 0.571912 7_3:+12873467 Msa1093250:CDS
GATGGACATCATACCTCCCC+AGG 0.583297 7_3:+12868690 Msa1093250:CDS
TGTGAAGTTTCCACCAGAGG+AGG 0.602149 7_3:-12867635 None:intergenic
TGGTGGAAACTTCACAGAAG+AGG 0.603811 7_3:+12867642 Msa1093250:CDS
GGGCATCATACCTCCTCTGG+TGG 0.613367 7_3:+12867625 Msa1093250:CDS
TTAATAATTGAAACTGCATG+TGG 0.637006 7_3:-12867580 None:intergenic
CAACATCATACCTCTACCAG+TGG 0.638485 7_3:+12871835 Msa1093250:CDS
CAACATCATACCTCTACCGG+TGG 0.645251 7_3:+12870201 Msa1093250:CDS
CAACATCATACCTCTACCGG+TGG 0.645251 7_3:+12874722 Msa1093250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAATGAAAAATTGAA+TGG + chr7_3:12867595-12867614 Msa1093250:CDS 10.0%
!!! CATAATAGTTATTTTAAAAT+AGG + chr7_3:12867858-12867877 Msa1093250:intron 10.0%
!! ATTGAAAAAATTATTATACT+CGG - chr7_3:12868255-12868274 None:intergenic 10.0%
!! AATTAATTTCAATCATATTA+TGG + chr7_3:12868770-12868789 Msa1093250:intron 10.0%
!! ATTGAAAAAATTATAATACT+CGG - chr7_3:12868978-12868997 None:intergenic 10.0%
!! ATTAAAAAAAATTAATTGTG+CGG + chr7_3:12869386-12869405 Msa1093250:intron 10.0%
!! ATTATTAATGAAATATTGAA+TGG + chr7_3:12870171-12870190 Msa1093250:CDS 10.0%
!! AATTAATTTCAATCATATTA+TGG + chr7_3:12868770-12868789 Msa1093250:intron 10.0%
!!! TTACTTTAAAAGAAAATTTT+GGG + chr7_3:12870776-12870795 Msa1093250:intron 10.0%
!! AAATAAGAAAATAACTTATT+TGG + chr7_3:12871486-12871505 Msa1093250:intron 10.0%
!! ATTATTAATGAAATATTGAA+TGG + chr7_3:12870171-12870190 Msa1093250:CDS 10.0%
!! GAATTATAAATTTAAATTGT+TGG + chr7_3:12872235-12872254 Msa1093250:intron 10.0%
!!! AAACATTGAATTATTATTTT+TGG - chr7_3:12872348-12872367 None:intergenic 10.0%
!! ATTATTAATGAAATATTGAA+TGG + chr7_3:12870171-12870190 Msa1093250:CDS 10.0%
!! ATTATTAATGAAATATTGAT+TGG + chr7_3:12874692-12874711 Msa1093250:CDS 10.0%
!! AATTAATTTCAATCATATTA+TGG + chr7_3:12868770-12868789 Msa1093250:intron 10.0%
!! ATAAAATATAAACTAATCTT+TGG + chr7_3:12872296-12872315 Msa1093250:intron 10.0%
!!! AATAATACATATTTTAAGCA+CGG + chr7_3:12867723-12867742 Msa1093250:intron 15.0%
!! TTGAAAAAATTATTATACTC+GGG - chr7_3:12868254-12868273 None:intergenic 15.0%
!!! TTGTTTTAAAGTTTATATCA+AGG + chr7_3:12868311-12868330 Msa1093250:intron 15.0%
!! ATCATTAATGAAAAATTGAA+TGG + chr7_3:12868663-12868682 Msa1093250:CDS 15.0%
!! TTGAAAAAATTATAATACTC+GGG - chr7_3:12868977-12868996 None:intergenic 15.0%
!!! AATTTGATCAATATTTTTGA+GGG + chr7_3:12869143-12869162 Msa1093250:intron 15.0%
!!! ACTTTGAATTTGTTTTTAAA+TGG - chr7_3:12869223-12869242 None:intergenic 15.0%
!!! AGATATTTAGAAGAAAATTT+TGG + chr7_3:12869270-12869289 Msa1093250:intron 15.0%
!!! GATATTTAGAAGAAAATTTT+GGG + chr7_3:12869271-12869290 Msa1093250:intron 15.0%
!! ATAGCTAATGTAAAAAAAAT+AGG + chr7_3:12869492-12869511 Msa1093250:intron 15.0%
!!! ACGATTTTTAATATTTTTCA+TGG - chr7_3:12869664-12869683 None:intergenic 15.0%
!!! CTATAAAGTATCTATAAATT+AGG - chr7_3:12870048-12870067 None:intergenic 15.0%
!! CTAATTTATAGATACTTTAT+AGG + chr7_3:12870046-12870065 Msa1093250:intron 15.0%
!!! GTTACTTTAAAAGAAAATTT+TGG + chr7_3:12870775-12870794 Msa1093250:intron 15.0%
!! GACAATAGATAAATTAATAA+TGG - chr7_3:12871281-12871300 None:intergenic 15.0%
!! ATTGTAAAAATTATCATACT+CGG - chr7_3:12870482-12870501 None:intergenic 15.0%
!!! TTACTTTAGTAGAAAATTTT+GGG + chr7_3:12872394-12872413 Msa1093250:intron 15.0%
!! AATAATAATTGAGATTACAA+GGG - chr7_3:12872462-12872481 None:intergenic 15.0%
!!! AAATAAATTGTTCAAGTTAA+AGG - chr7_3:12872876-12872895 None:intergenic 15.0%
!!! AACGTTTTTAAATTTTATGA+CGG - chr7_3:12871299-12871318 None:intergenic 15.0%
!! AAAGAAGAAAATAACTTATT+TGG + chr7_3:12869852-12869871 Msa1093250:intron 15.0%
!! AACTTATAGATATACTTTAT+AGG + chr7_3:12873339-12873358 Msa1093250:intron 15.0%
!!! ACTTTATAGGAATAAAATTT+TGG + chr7_3:12873352-12873371 Msa1093250:intron 15.0%
!! AATTCATTTCTATCATATTA+TGG + chr7_3:12873571-12873590 Msa1093250:intron 15.0%
!!! TATACTTTAGAAGAAAATTT+TGG + chr7_3:12874060-12874079 Msa1093250:intron 15.0%
!!! ATACTTTAGAAGAAAATTTT+GGG + chr7_3:12868550-12868569 Msa1093250:intron 15.0%
!! TTAACTTATAGATACTTTAT+AGG + chr7_3:12874567-12874586 Msa1093250:intron 15.0%
!! TTCAAAAAAATTATCATACT+CGG - chr7_3:12875005-12875024 None:intergenic 15.0%
!!! TATAATGATCTTTAAAATTG+TGG + chr7_3:12875120-12875139 Msa1093250:intron 15.0%
!!! AATTTGATCGATATTTTTTA+GGG + chr7_3:12875169-12875188 Msa1093250:intron 15.0%
!!! TTACTTTAGAAGAATATTTT+GGG + chr7_3:12875303-12875322 Msa1093250:intron 15.0%
!! ATTAATGAAAAATTGAATGG+TGG + chr7_3:12867598-12867617 Msa1093250:CDS 20.0%
!!! ATAATACATATTTTAAGCAC+GGG + chr7_3:12867724-12867743 Msa1093250:intron 20.0%
!!! TCAAATGATTAACTTTTACA+GGG - chr7_3:12867962-12867981 None:intergenic 20.0%
!!! TTCAAATGATTAACTTTTAC+AGG - chr7_3:12867963-12867982 None:intergenic 20.0%
!!! TTCAAAAGATTTACTTTTAC+AGG + chr7_3:12868152-12868171 Msa1093250:intron 20.0%
!!! TCAAAAGATTTACTTTTACA+GGG + chr7_3:12868153-12868172 Msa1093250:intron 20.0%
!! AGACAAATATTAAGATTACA+CGG - chr7_3:12868620-12868639 None:intergenic 20.0%
!! ATTAATGAAAAATTGAATGG+TGG + chr7_3:12867598-12867617 Msa1093250:CDS 20.0%
!! AATTCAATGAATATCAGTAT+AGG + chr7_3:12868894-12868913 Msa1093250:intron 20.0%
!!! GAATTTGATCAATATTTTTG+AGG + chr7_3:12869142-12869161 Msa1093250:intron 20.0%
!!! ATTTGATCAATATTTTTGAG+GGG + chr7_3:12869144-12869163 Msa1093250:intron 20.0%
!! GACAATAATTGAAATTATAC+CGG - chr7_3:12869339-12869358 None:intergenic 20.0%
!! TTAATAATTGAAACTACATG+TGG - chr7_3:12869371-12869390 None:intergenic 20.0%
!!! AATCTTGATCGTAATTTTTT+AGG + chr7_3:12869973-12869992 Msa1093250:intron 20.0%
!!! ATCTTGATCGTAATTTTTTA+GGG + chr7_3:12869974-12869993 Msa1093250:intron 20.0%
!! TACTTTATAGGAAGAAAATT+TGG + chr7_3:12870058-12870077 Msa1093250:intron 20.0%
!! ACTTTATAGGAAGAAAATTT+GGG + chr7_3:12870059-12870078 Msa1093250:intron 20.0%
!!! ATAGAAATTTTTTACTAGAG+AGG - chr7_3:12870106-12870125 None:intergenic 20.0%
!! ATTAATGAAATATTGAATGG+TGG + chr7_3:12870174-12870193 Msa1093250:CDS 20.0%
!! TTGTAAAAATTATCATACTC+AGG - chr7_3:12870481-12870500 None:intergenic 20.0%
!! GATAATGATCTTCAAAATTA+TGG + chr7_3:12870596-12870615 Msa1093250:intron 20.0%
!!! AATCAATTTTAGTCTCAATA+TGG + chr7_3:12870986-12871005 Msa1093250:intron 20.0%
!!! AATCTTGATCGATATTTTTT+AGG + chr7_3:12871611-12871630 Msa1093250:intron 20.0%
!!! ATCTTGATCGATATTTTTTA+GGG + chr7_3:12871612-12871631 Msa1093250:intron 20.0%
!! AAAGAAATTTGAATTGTACA+AGG - chr7_3:12871645-12871664 None:intergenic 20.0%
!!! ATTTTATGGCAAGAAAATTT+TGG + chr7_3:12871696-12871715 Msa1093250:intron 20.0%
!!! ATAGTAATTTTTTACTAGAG+AGG - chr7_3:12871743-12871762 None:intergenic 20.0%
!! TTGTAAAAATTATCATACTC+GGG - chr7_3:12870481-12870500 None:intergenic 20.0%
!!! AATTTGATCGATATTTTTGA+GGG + chr7_3:12872264-12872283 Msa1093250:intron 20.0%
!!! GTTACTTTAGTAGAAAATTT+TGG + chr7_3:12872393-12872412 Msa1093250:intron 20.0%
!! ATAATAATTGAGATTACAAG+GGG - chr7_3:12872461-12872480 None:intergenic 20.0%
!! GAATAATAATTGAGATTACA+AGG - chr7_3:12872463-12872482 None:intergenic 20.0%
!! TTAATAATTGAAACTACATG+TGG - chr7_3:12869371-12869390 None:intergenic 20.0%
!!! AATCAATTTTAGTCACAATA+TGG + chr7_3:12872615-12872634 Msa1093250:intron 20.0%
!!! AATCTTGATCGATATTTTTT+AGG + chr7_3:12871611-12871630 Msa1093250:intron 20.0%
!!! ATCTTGATCGATATTTTTTA+GGG + chr7_3:12871612-12871631 Msa1093250:intron 20.0%
!!! ATAGTAATTTTTTACTAGAG+AGG - chr7_3:12871743-12871762 None:intergenic 20.0%
!! ATTAATGAAATATTGAATGG+TGG + chr7_3:12870174-12870193 Msa1093250:CDS 20.0%
!! TTGTGAAAATTATCATACTA+GGG - chr7_3:12873770-12873789 None:intergenic 20.0%
!! ATTGTGAAAATTATCATACT+AGG - chr7_3:12873771-12873790 None:intergenic 20.0%
!! TATCGAGAATTATAAATTGT+TGG + chr7_3:12873902-12873921 Msa1093250:intron 20.0%
!!! AATTTGATCGATATTTTTGA+GGG + chr7_3:12872264-12872283 Msa1093250:intron 20.0%
!! TTAATAATTGAAACTACATG+TGG - chr7_3:12869371-12869390 None:intergenic 20.0%
!!! ACTTTATAGGAAGAAAATTT+TGG + chr7_3:12870059-12870078 Msa1093250:intron 20.0%
!!! ATAGTAATTTTTTACTAGAG+AGG - chr7_3:12871743-12871762 None:intergenic 20.0%
!! TTAATAATTGAAACTGTTTG+TGG - chr7_3:12874680-12874699 None:intergenic 20.0%
!!! ATTAATGAAATATTGATTGG+TGG + chr7_3:12874695-12874714 Msa1093250:CDS 20.0%
!! TCAAAAAAATTATCATACTC+GGG - chr7_3:12875004-12875023 None:intergenic 20.0%
!! TGGAGAATTATAAAAATTGT+TGG + chr7_3:12875140-12875159 Msa1093250:intron 20.0%
!!! GAATTTGATCGATATTTTTT+AGG + chr7_3:12875168-12875187 Msa1093250:intron 20.0%
!!! ATTTGATCGATATTTTTTAG+GGG + chr7_3:12875170-12875189 Msa1093250:intron 20.0%
!!! GTTACTTTAGAAGAATATTT+TGG + chr7_3:12875302-12875321 Msa1093250:intron 20.0%
!! TTAATAATTGAAACTACATG+TGG - chr7_3:12869371-12869390 None:intergenic 20.0%
! TTAATAATTGAAACTGCATG+TGG - chr7_3:12867583-12867602 None:intergenic 25.0%
!! CAAATGATTAACTTTTACAG+GGG - chr7_3:12867961-12867980 None:intergenic 25.0%
!!! CAAAAGATTTACTTTTACAG+GGG + chr7_3:12868154-12868173 Msa1093250:intron 25.0%
!!! ATCGTTGACACATATTTTAA+AGG - chr7_3:12868224-12868243 None:intergenic 25.0%
! AATTTGATCGATATTGTAGT+GGG + chr7_3:12868420-12868439 Msa1093250:intron 25.0%
! GACAAATATTAAGATTACAC+GGG - chr7_3:12868619-12868638 None:intergenic 25.0%
! TTAATGATTGAAACTACAAG+TGG - chr7_3:12868651-12868670 None:intergenic 25.0%
! AAAAAAATTAATTGTGCGGA+TGG + chr7_3:12869390-12869409 Msa1093250:intron 25.0%
! AAAAAATTAATTGTGCGGAT+GGG + chr7_3:12869391-12869410 Msa1093250:intron 25.0%
!!! TCTTGATCGTAATTTTTTAG+GGG + chr7_3:12869975-12869994 Msa1093250:intron 25.0%
! TTTGAAGATCATTATCAATC+TGG - chr7_3:12870592-12870611 None:intergenic 25.0%
!!! AATTTGATCGATAGTTTTGT+GGG + chr7_3:12870643-12870662 Msa1093250:intron 25.0%
!! ACAAGGGAAAAAACTTTTAT+GGG - chr7_3:12870817-12870836 None:intergenic 25.0%
!! TACAAGGGAAAAAACTTTTA+TGG - chr7_3:12870818-12870837 None:intergenic 25.0%
! ATCGCTAATGTATAAAACAT+AGG + chr7_3:12871143-12871162 Msa1093250:intron 25.0%
! ATATAAATAGCTCAAGTTAG+AGG - chr7_3:12871235-12871254 None:intergenic 25.0%
! TTATTTACTTCAGTATTCCT+AGG - chr7_3:12871472-12871491 None:intergenic 25.0%
! CCATAAAATATCTATAAGCT+AGG - chr7_3:12871685-12871704 None:intergenic 25.0%
!! CCTAGCTTATAGATATTTTA+TGG + chr7_3:12871682-12871701 Msa1093250:intron 25.0%
! AAATAAATCATCCACAACAA+CGG - chr7_3:12871964-12871983 None:intergenic 25.0%
!!! GAATTTGATCGATATTTTTG+AGG + chr7_3:12872263-12872282 Msa1093250:intron 25.0%
!!! ATTTGATCGATATTTTTGAG+GGG + chr7_3:12872265-12872284 Msa1093250:intron 25.0%
! TAATAATTGAGATTACAAGG+GGG - chr7_3:12872460-12872479 None:intergenic 25.0%
! AAGTCTACATGTAAACATTA+GGG + chr7_3:12872666-12872685 Msa1093250:intron 25.0%
! ATACAACATCAAATCAATTG+TGG + chr7_3:12872690-12872709 Msa1093250:intron 25.0%
!! TGCTATGTTTTATACAATAG+CGG - chr7_3:12872788-12872807 None:intergenic 25.0%
! GACGGTAGATAAATTAATAA+AGG - chr7_3:12872938-12872957 None:intergenic 25.0%
! TTCTTTACTTCAATATTCCT+AGG - chr7_3:12873130-12873149 None:intergenic 25.0%
!!! TCTTGATCGATATTTTTTAG+GGG + chr7_3:12871613-12871632 Msa1093250:intron 25.0%
! ATTTGAATTGTACAAAGAAG+AGG - chr7_3:12873293-12873312 None:intergenic 25.0%
! TTAATAATTGAAACTGCATG+TGG - chr7_3:12867583-12867602 None:intergenic 25.0%
! AAAATGTTGTAACACATACT+TGG - chr7_3:12873539-12873558 None:intergenic 25.0%
! AAATATATCATCCACAACAA+CGG - chr7_3:12873623-12873642 None:intergenic 25.0%
! TTTGAAGATCATTATCAATC+TGG - chr7_3:12870592-12870611 None:intergenic 25.0%
!!! GAATTTGATCGATATTTTTG+AGG + chr7_3:12872263-12872282 Msa1093250:intron 25.0%
!!! ATTTGATCGATATTTTTGAG+GGG + chr7_3:12872265-12872284 Msa1093250:intron 25.0%
!! ACAAAGGAGAAAACTTTTAT+GGG - chr7_3:12874113-12874132 None:intergenic 25.0%
!! TACAAAGGAGAAAACTTTTA+TGG - chr7_3:12874114-12874133 None:intergenic 25.0%
! GATAATAATCGAGATTACAA+AGG - chr7_3:12874129-12874148 None:intergenic 25.0%
! TTCTTCTTCTATTAAAAACG+CGG + chr7_3:12874266-12874285 Msa1093250:intron 25.0%
! AATCTTGAATATACTTTGTG+TGG + chr7_3:12874294-12874313 Msa1093250:intron 25.0%
! TTCTTTACTTCAATATTCCT+TGG - chr7_3:12873130-12873149 None:intergenic 25.0%
! AAAATGTTATAAGACGTACT+TGG - chr7_3:12874767-12874786 None:intergenic 25.0%
! AAATAAATCAACCACAACAA+CGG - chr7_3:12874850-12874869 None:intergenic 25.0%
! AATAATTGAGATGATTACAC+GGG - chr7_3:12875371-12875390 None:intergenic 25.0%
! CAATAATTGAGATGATTACA+CGG - chr7_3:12875372-12875391 None:intergenic 25.0%
! AAAAATTGAATGGTGGAGAT+GGG + chr7_3:12867605-12867624 Msa1093250:CDS 30.0%
!! AAAGTGTTGTAACACATACT+TGG - chr7_3:12867670-12867689 None:intergenic 30.0%
TCAAATGACCTATAATTGCA+GGG - chr7_3:12867902-12867921 None:intergenic 30.0%
ATCAAATGACCTATAATTGC+AGG - chr7_3:12867903-12867922 None:intergenic 30.0%
!! TGTTTAACTTGACCAACTAA+GGG - chr7_3:12868041-12868060 None:intergenic 30.0%
TTGGTCAAGTTAAACAGAAA+AGG + chr7_3:12868045-12868064 Msa1093250:intron 30.0%
GAATTTGATCGATATTGTAG+TGG + chr7_3:12868419-12868438 Msa1093250:intron 30.0%
ATTTGATCGATATTGTAGTG+GGG + chr7_3:12868421-12868440 Msa1093250:intron 30.0%
AAATAAATCGTCCACAACAA+CGG - chr7_3:12868824-12868843 None:intergenic 30.0%
! TAATATATTGGTAGCAGTGT+CGG - chr7_3:12869521-12869540 None:intergenic 30.0%
AAGTGTATGTGCTTCATAAA+AGG + chr7_3:12869934-12869953 Msa1093250:intron 30.0%
AAACTGCATGTGATACAAAA+AGG - chr7_3:12870149-12870168 None:intergenic 30.0%
AAAATGTTGTTACACGTACT+TGG - chr7_3:12870246-12870265 None:intergenic 30.0%
GGTAACATATATTTCAAGCA+CGG + chr7_3:12870299-12870318 Msa1093250:intron 30.0%
!! GAATTTGATCGATAGTTTTG+TGG + chr7_3:12870642-12870661 Msa1093250:intron 30.0%
!!! ATTTGATCGATAGTTTTGTG+GGG + chr7_3:12870644-12870663 Msa1093250:intron 30.0%
GACAGTAATTCAGATTACAA+GGG - chr7_3:12870833-12870852 None:intergenic 30.0%
AGACAGTAATTCAGATTACA+AGG - chr7_3:12870834-12870853 None:intergenic 30.0%
ACGTCTACATGTAAACATTA+GGG + chr7_3:12871037-12871056 Msa1093250:intron 30.0%
GTACAACATCAAATCAATTG+TGG + chr7_3:12871061-12871080 Msa1093250:intron 30.0%
TGTACATCATAACCATAACA+TGG - chr7_3:12871087-12871106 None:intergenic 30.0%
TATTATATAGGTAGCAGTGT+TGG - chr7_3:12871172-12871191 None:intergenic 30.0%
TTAATAATTGAAACTGCACG+TGG - chr7_3:12871793-12871812 None:intergenic 30.0%
GTAACACATATTTCAAGCAT+GGG + chr7_3:12871934-12871953 Msa1093250:intron 30.0%
TAACACATATTTCAAGCATG+GGG + chr7_3:12871935-12871954 Msa1093250:intron 30.0%
AAAATAGTTAATGGTGCAGA+TGG + chr7_3:12872517-12872536 Msa1093250:intron 30.0%
AAATAGTTAATGGTGCAGAT+GGG + chr7_3:12872518-12872537 Msa1093250:intron 30.0%
!! AAAGTTTTGTAACACGTACT+TGG - chr7_3:12872583-12872602 None:intergenic 30.0%
CAAGTCTACATGTAAACATT+AGG + chr7_3:12872665-12872684 Msa1093250:intron 30.0%
AGTCTACATGTAAACATTAG+GGG + chr7_3:12872667-12872686 Msa1093250:intron 30.0%
ACTCTTGAATATACTTTGTG+TGG + chr7_3:12871376-12871395 Msa1093250:intron 30.0%
! TACAAGTGTCATAGAAGTAT+CGG + chr7_3:12873188-12873207 Msa1093250:intron 30.0%
AATATATCATCCACAACAAC+GGG - chr7_3:12873622-12873641 None:intergenic 30.0%
TAAAAATTCAATGGTGCAGA+TGG + chr7_3:12874182-12874201 Msa1093250:intron 30.0%
AAAAATTCAATGGTGCAGAT+GGG + chr7_3:12874183-12874202 Msa1093250:intron 30.0%
!! AAAGTATTGTAACACGTACT+TGG - chr7_3:12874248-12874267 None:intergenic 30.0%
TACTTCAATATTCCTTGGTT+CGG - chr7_3:12874385-12874404 None:intergenic 30.0%
AATAAATCAACCACAACAAC+GGG - chr7_3:12874849-12874868 None:intergenic 30.0%
AAATATTGAATGGTGCAGAT+TGG + chr7_3:12870889-12870908 Msa1093250:intron 30.0%
! GAAAAATTGAATGGTGGAGA+TGG + chr7_3:12867604-12867623 Msa1093250:CDS 35.0%
CATTTCATCCCTGCAATTAT+AGG + chr7_3:12867891-12867910 Msa1093250:intron 35.0%
! TAACTTTTACAGGGGCAAAA+TGG - chr7_3:12867953-12867972 None:intergenic 35.0%
GCAATGATTAACTCTGATGA+GGG - chr7_3:12867993-12868012 None:intergenic 35.0%
!! CTGTTTAACTTGACCAACTA+AGG - chr7_3:12868042-12868061 None:intergenic 35.0%
!! AAAATGCCCTTAGTTGATGA+AGG - chr7_3:12868084-12868103 None:intergenic 35.0%
!!! TTCATCAACTAAGGGCATTT+TGG + chr7_3:12868083-12868102 Msa1093250:intron 35.0%
ATGAGTGATTAACTCTGATG+AGG + chr7_3:12868121-12868140 Msa1093250:intron 35.0%
TGAGTGATTAACTCTGATGA+GGG + chr7_3:12868122-12868141 Msa1093250:intron 35.0%
!! TTACTTTTACAGGGGCAAAA+TGG + chr7_3:12868162-12868181 Msa1093250:intron 35.0%
! TACTTTTACAGGGGCAAAAT+GGG + chr7_3:12868163-12868182 Msa1093250:intron 35.0%
! CACGGGAAACAATCTTTTAT+GGG - chr7_3:12868602-12868621 None:intergenic 35.0%
! ACACGGGAAACAATCTTTTA+TGG - chr7_3:12868603-12868622 None:intergenic 35.0%
! GAAAAATTGAATGGTGGAGA+TGG + chr7_3:12867604-12867623 Msa1093250:CDS 35.0%
!! AAAGTGTTGTAACACGTACT+TGG - chr7_3:12868738-12868757 None:intergenic 35.0%
GGTAACACATATTTCATGCA+CGG + chr7_3:12868791-12868810 Msa1093250:intron 35.0%
GTAACACATATTTCATGCAC+GGG + chr7_3:12868792-12868811 Msa1093250:intron 35.0%
AATAAATCGTCCACAACAAC+GGG - chr7_3:12868823-12868842 None:intergenic 35.0%
! ATACCGGAGACAACTTTTAT+GGG - chr7_3:12869323-12869342 None:intergenic 35.0%
! TATACCGGAGACAACTTTTA+TGG - chr7_3:12869324-12869343 None:intergenic 35.0%
!! AAAGTGTTGTAACTCGTACT+TGG - chr7_3:12869456-12869475 None:intergenic 35.0%
AGAAAATGTTTATCGACGAG+GGG - chr7_3:12869710-12869729 None:intergenic 35.0%
GAGAAAATGTTTATCGACGA+GGG - chr7_3:12869711-12869730 None:intergenic 35.0%
TGAGAAAATGTTTATCGACG+AGG - chr7_3:12869712-12869731 None:intergenic 35.0%
!! AAAAAGTGTCATAGGAGTGT+CGG + chr7_3:12869898-12869917 Msa1093250:intron 35.0%
TATGAAGCACATACACTTCT+AGG - chr7_3:12869932-12869951 None:intergenic 35.0%
GTGACACTCACAAACAAAAA+AGG - chr7_3:12870026-12870045 None:intergenic 35.0%
!! AAAATTTGGGAGTGTCACAT+TGG + chr7_3:12870072-12870091 Msa1093250:intron 35.0%
!!! TTTGATCGATAGTTTTGTGG+GGG + chr7_3:12870645-12870664 Msa1093250:intron 35.0%
!! AAAGTGTTGTAACACGTACT+TGG - chr7_3:12868738-12868757 None:intergenic 35.0%
CACGTCTACATGTAAACATT+AGG + chr7_3:12871036-12871055 Msa1093250:intron 35.0%
CGTCTACATGTAAACATTAG+GGG + chr7_3:12871038-12871057 Msa1093250:intron 35.0%
GTCTACATGTAAACATTAGG+GGG + chr7_3:12871039-12871058 Msa1093250:intron 35.0%
AATCAATTGTGGCCATGTTA+TGG + chr7_3:12871072-12871091 Msa1093250:intron 35.0%
ATGATGTACAAACTCTGACA+TGG + chr7_3:12871097-12871116 Msa1093250:intron 35.0%
TGAGAAATGTTGATCAACGA+CGG - chr7_3:12871346-12871365 None:intergenic 35.0%
GTTGATCAACATTTCTCACA+AGG + chr7_3:12871348-12871367 Msa1093250:intron 35.0%
TACTTCAGTATTCCTAGGTT+CGG - chr7_3:12871467-12871486 None:intergenic 35.0%
TATGAAGCACATACACTTCT+AGG - chr7_3:12869932-12869951 None:intergenic 35.0%
GGTAACACATATTTCAAGCA+TGG + chr7_3:12871933-12871952 Msa1093250:intron 35.0%
! ACAAGGGGGAAAACTTTTAT+GGG - chr7_3:12872446-12872465 None:intergenic 35.0%
! TACAAGGGGGAAAACTTTTA+TGG - chr7_3:12872447-12872466 None:intergenic 35.0%
AATCAATTGTGGCCATGTTA+TGG + chr7_3:12871072-12871091 Msa1093250:intron 35.0%
CATCATAGGTAACCATAACA+TGG - chr7_3:12872716-12872735 None:intergenic 35.0%
TGAGGAATGTTTATCAACGA+GGG - chr7_3:12873003-12873022 None:intergenic 35.0%
! GTTGATAAACATTCCTCACA+AGG + chr7_3:12873005-12873024 Msa1093250:intron 35.0%
TATGAAGCACATACACTTCT+AGG - chr7_3:12869932-12869951 None:intergenic 35.0%
! CTCTACCGGTGAAAATTTTA+CGG + chr7_3:12873505-12873524 Msa1093250:CDS 35.0%
! CTCTTCCGTAAAATTTTCAC+CGG - chr7_3:12873513-12873532 None:intergenic 35.0%
GGTAACACATATTTCAAGCA+CGG + chr7_3:12871933-12871952 Msa1093250:intron 35.0%
GTAACACATATTTCAAGCAC+GGG + chr7_3:12873593-12873612 Msa1093250:intron 35.0%
TAACACATATTTCAAGCACG+GGG + chr7_3:12873594-12873613 Msa1093250:intron 35.0%
TATGAAGCACATACACTTCT+AGG - chr7_3:12869932-12869951 None:intergenic 35.0%
AAGTGTATGTGCTTCATAGA+AGG + chr7_3:12871566-12871585 Msa1093250:intron 35.0%
! TGGAAGGATTAGTAAGCTCA+GGG - chr7_3:12867933-12867952 None:intergenic 40.0%
! ATGGAAGGATTAGTAAGCTC+AGG - chr7_3:12867934-12867953 None:intergenic 40.0%
! TTTTACAGGGGCAAAATGGA+AGG - chr7_3:12867949-12867968 None:intergenic 40.0%
GGCAATGATTAACTCTGATG+AGG - chr7_3:12867994-12868013 None:intergenic 40.0%
!! TTTGGTCATTTTGCGTGACA+TGG - chr7_3:12868015-12868034 None:intergenic 40.0%
ATGACCAAAATGCCCTTAGT+TGG + chr7_3:12868026-12868045 Msa1093250:intron 40.0%
!!! TTGACCAACTAAGGGCATTT+TGG - chr7_3:12868033-12868052 None:intergenic 40.0%
!!! GTTGATGAAGGAGGGTATTT+TGG - chr7_3:12868072-12868091 None:intergenic 40.0%
ATACCCTCCTTCATCAACTA+AGG + chr7_3:12868074-12868093 Msa1093250:intron 40.0%
TACCCTCCTTCATCAACTAA+GGG + chr7_3:12868075-12868094 Msa1093250:intron 40.0%
! ATGGGAGGATTAGTAAGCTT+AGG + chr7_3:12868181-12868200 Msa1093250:intron 40.0%
! TGGGAGGATTAGTAAGCTTA+GGG + chr7_3:12868182-12868201 Msa1093250:intron 40.0%
! TTCCGTGAAGTTTTTACCTG+GGG - chr7_3:12868709-12868728 None:intergenic 40.0%
! CTTCCGTGAAGTTTTTACCT+GGG - chr7_3:12868710-12868729 None:intergenic 40.0%
! TCTTCCGTGAAGTTTTTACC+TGG - chr7_3:12868711-12868730 None:intergenic 40.0%
AGGTAAAAACTTCACGGAAG+AGG + chr7_3:12868710-12868729 Msa1093250:CDS 40.0%
TCTCCCATAAAAGTTGTCTC+CGG + chr7_3:12869317-12869336 Msa1093250:intron 40.0%
CTCTTTCGTGAAGTTTCCAT+CGG - chr7_3:12869430-12869449 None:intergenic 40.0%
ACTCTTGAATCTACTGTGTG+TGG + chr7_3:12869742-12869761 Msa1093250:intron 40.0%
!! CGTGTCGTAAAAAGTGTCAT+AGG + chr7_3:12869890-12869909 Msa1093250:intron 40.0%
AGCACATACACTTCTAGGTT+CGG - chr7_3:12869927-12869946 None:intergenic 40.0%
GATCAACATCATACCTCTAC+CGG + chr7_3:12870198-12870217 Msa1093250:CDS 40.0%
TTTCGTGAAGTTTCCACCAA+AGG - chr7_3:12870925-12870944 None:intergenic 40.0%
GAGAAATGTTGATCAACGAC+GGG - chr7_3:12871345-12871364 None:intergenic 40.0%
GGACAACTCAAACAAATGTC+TGG - chr7_3:12871418-12871437 None:intergenic 40.0%
ACTTGTCGTACAAGTGTCTT+AGG + chr7_3:12871522-12871541 Msa1093250:intron 40.0%
CTCTACCAGTGGAAACTTTA+CGG + chr7_3:12871846-12871865 Msa1093250:CDS 40.0%
TTTCGTGAAGTTTCCTCCAA+AGG - chr7_3:12872554-12872573 None:intergenic 40.0%
TTCGTGAGTTCGTACATCAT+AGG - chr7_3:12872730-12872749 None:intergenic 40.0%
GAGGAATGTTTATCAACGAG+GGG - chr7_3:12873002-12873021 None:intergenic 40.0%
GTGAGGAATGTTTATCAACG+AGG - chr7_3:12873004-12873023 None:intergenic 40.0%
TCAAGAGTTAATGCCTTGTG+AGG - chr7_3:12873021-12873040 None:intergenic 40.0%
GGACAACTCAAACAAATGTC+TGG - chr7_3:12871418-12871437 None:intergenic 40.0%
CTGTGTCTGACACTTATATG+AGG - chr7_3:12873105-12873124 None:intergenic 40.0%
GATCAACATCATACCTCTAC+CGG + chr7_3:12870198-12870217 Msa1093250:CDS 40.0%
! CGTAAAATTTTCACCGGTAG+AGG - chr7_3:12873507-12873526 None:intergenic 40.0%
TTTCGTGAAGTTTCCTCCAA+TGG - chr7_3:12872554-12872573 None:intergenic 40.0%
GACACTTATATGAGGTGTGT+AGG - chr7_3:12874357-12874376 None:intergenic 40.0%
AGCACATACACTTCTAGGTA+CGG - chr7_3:12871559-12871578 None:intergenic 40.0%
GATCAACATCATACCTCTAC+CGG + chr7_3:12870198-12870217 Msa1093250:CDS 40.0%
GGTATCACGTATTTCATGCA+CGG + chr7_3:12874820-12874839 Msa1093250:intron 40.0%
GTATCACGTATTTCATGCAC+GGG + chr7_3:12874821-12874840 Msa1093250:intron 40.0%
! ACACGGGCGAAAACTTTTAT+GGG - chr7_3:12875355-12875374 None:intergenic 40.0%
! TACACGGGCGAAAACTTTTA+TGG - chr7_3:12875356-12875375 None:intergenic 40.0%
TTTCGTGAAGTTTCCTCTAG+AGG - chr7_3:12875466-12875485 None:intergenic 40.0%
TAGAGGAAACTTCACGAAAG+AGG + chr7_3:12875467-12875486 Msa1093250:CDS 40.0%
TTCTGTGAAGTTTCCACCAG+AGG - chr7_3:12867641-12867660 None:intergenic 45.0%
TGGTGGAAACTTCACAGAAG+AGG + chr7_3:12867642-12867661 Msa1093250:CDS 45.0%
!! TGCCCTTAGTTGATGAAGGA+GGG - chr7_3:12868080-12868099 None:intergenic 45.0%
!! ATGCCCTTAGTTGATGAAGG+AGG - chr7_3:12868081-12868100 None:intergenic 45.0%
! TTTTACAGGGGCAAAATGGG+AGG + chr7_3:12868166-12868185 Msa1093250:intron 45.0%
CTCCCCAGGTAAAAACTTCA+CGG + chr7_3:12868704-12868723 Msa1093250:CDS 45.0%
TTTCGTGAAGTTTCCATCGG+AGG - chr7_3:12869427-12869446 None:intergenic 45.0%
CGATGGAAACTTCACGAAAG+AGG + chr7_3:12869428-12869447 Msa1093250:intron 45.0%
TTCTTTACTCCGACAGTCCT+AGG - chr7_3:12869838-12869857 None:intergenic 45.0%
CTCTACCGGTGGAAACTTTA+CGG + chr7_3:12870212-12870231 Msa1093250:CDS 45.0%
CTCTACCGTAAAGTTTCCAC+CGG - chr7_3:12870220-12870239 None:intergenic 45.0%
TGGTGGAAACTTCACGAAAG+AGG + chr7_3:12870926-12870945 Msa1093250:CDS 45.0%
!! GTTGATCAACGACGGGTTAT+AGG - chr7_3:12871338-12871357 None:intergenic 45.0%
TCTGACGCTTATATGAGGTG+TGG - chr7_3:12871442-12871461 None:intergenic 45.0%
GACACTTGTACGACAAGTGT+CGG - chr7_3:12871520-12871539 None:intergenic 45.0%
CAACATCATACCTCTACCAG+TGG + chr7_3:12871835-12871854 Msa1093250:CDS 45.0%
CGTAAAGTTTCCACTGGTAG+AGG - chr7_3:12871848-12871867 None:intergenic 45.0%
CTCTTCCGTAAAGTTTCCAC+TGG - chr7_3:12871854-12871873 None:intergenic 45.0%
TGGAGGAAACTTCACGAAAG+AGG + chr7_3:12872555-12872574 Msa1093250:CDS 45.0%
GACACTTATATGAGGTGCGT+CGG - chr7_3:12873097-12873116 None:intergenic 45.0%
AAGTGTCAGACACAGAACCT+AGG + chr7_3:12873110-12873129 Msa1093250:intron 45.0%
GACACTTGTACGACATGTGT+CGG - chr7_3:12873178-12873197 None:intergenic 45.0%
GGACAACTCAAACAGATGTC+TGG - chr7_3:12874336-12874355 None:intergenic 45.0%
CGGTGTCTGACACTTATATG+AGG - chr7_3:12874365-12874384 None:intergenic 45.0%
ACGTGTCGTACAAGTGTCAT+TGG + chr7_3:12874440-12874459 Msa1093250:intron 45.0%
CTCTACCGGTGGAAACTTTA+CGG + chr7_3:12870212-12870231 Msa1093250:CDS 45.0%
CTCTTCCGTAAAGTTTCCAC+CGG - chr7_3:12871854-12871873 None:intergenic 45.0%
!!! ATAATAGTTATTTTAAAATA+GGG + chr7_3:12867859-12867878 Msa1093250:intron 5.0%
!! AGAAAAATAAATTAATATAT+TGG - chr7_3:12869533-12869552 None:intergenic 5.0%
!! TATTAAAAAAAAATATTGAA+TGG + chr7_3:12870879-12870898 Msa1093250:intron 5.0%
!! AGATAAATAAATTATTATAT+AGG - chr7_3:12871184-12871203 None:intergenic 5.0%
!!! AATTAATTTTAATCATATTA+TGG + chr7_3:12871912-12871931 Msa1093250:intron 5.0%
!! TATTAAAATAAAATAGTTAA+TGG + chr7_3:12872508-12872527 Msa1093250:intron 5.0%
!! AGATAAATAAATTATTATAT+AGG - chr7_3:12871184-12871203 None:intergenic 5.0%
!! ATTATTAAATAAAAATTCAA+TGG + chr7_3:12874173-12874192 Msa1093250:intron 5.0%
!! TATTAAAAAAAAATATTGAA+TGG + chr7_3:12870879-12870898 Msa1093250:intron 5.0%
TGTGAAGTTTCCACCAGAGG+AGG - chr7_3:12867638-12867657 None:intergenic 50.0%
! CGTGAAGTTTTTACCTGGGG+AGG - chr7_3:12868706-12868725 None:intergenic 50.0%
AGTTTCCATCGGAGGAAGTC+TGG - chr7_3:12869419-12869438 None:intergenic 50.0%
TACTCCGACAGTCCTAGGTT+CGG - chr7_3:12869833-12869852 None:intergenic 50.0%
CAACATCATACCTCTACCGG+TGG + chr7_3:12870201-12870220 Msa1093250:CDS 50.0%
CGTAAAGTTTCCACCGGTAG+AGG - chr7_3:12870214-12870233 None:intergenic 50.0%
AGCACGGATACTCATCGTTG+TGG + chr7_3:12870315-12870334 Msa1093250:intron 50.0%
CGTGAAGTTTCCACCAAAGG+AGG - chr7_3:12870922-12870941 None:intergenic 50.0%
GACGCTTATATGAGGTGTGG+CGG - chr7_3:12871439-12871458 None:intergenic 50.0%
CGGTGTCTGACGCTTATATG+AGG - chr7_3:12871447-12871466 None:intergenic 50.0%
GATGGGCATCAAACCTCCTT+TGG + chr7_3:12872535-12872554 Msa1093250:intron 50.0%
CGTGAAGTTTCCTCCAAAGG+AGG - chr7_3:12872551-12872570 None:intergenic 50.0%
CGTGAAGTTTCCTCCAATGG+AGG - chr7_3:12874216-12874235 None:intergenic 50.0%
AAGTGTCAGACACCGAACCA+AGG + chr7_3:12874370-12874389 Msa1093250:intron 50.0%
CAACATCATACCTCTACCGG+TGG + chr7_3:12870201-12870220 Msa1093250:CDS 50.0%
CGTAAAGTTTCCACCGGTAG+AGG - chr7_3:12870214-12870233 None:intergenic 50.0%
! CGTGAAGTTTCCTCTAGAGG+AGG - chr7_3:12875463-12875482 None:intergenic 50.0%
GATGGGCATCATACCTCCTC+TGG + chr7_3:12867622-12867641 Msa1093250:CDS 55.0%
GATGGACATCATACCTCCCC+AGG + chr7_3:12868690-12868709 Msa1093250:CDS 55.0%
ACGGGTAGTACCCGTTGTTG+TGG + chr7_3:12868810-12868829 Msa1093250:intron 55.0%
GTGTGTCAGACACCGAACCT+AGG + chr7_3:12869818-12869837 Msa1093250:intron 55.0%
GACACCGAACCTAGGACTGT+CGG + chr7_3:12869826-12869845 Msa1093250:intron 55.0%
GATGAGCGTCAGACCTCCTT+TGG + chr7_3:12870906-12870925 Msa1093250:intron 55.0%
AAGCGTCAGACACCGAACCT+AGG + chr7_3:12871452-12871471 Msa1093250:intron 55.0%
! GCATGGGGTATCCGTTGTTG+TGG + chr7_3:12871950-12871969 Msa1093250:intron 55.0%
GGGCATCAAACCTCCTTTGG+AGG + chr7_3:12872538-12872557 Msa1093250:CDS 55.0%
GGGCATCATACCTCCTCTGG+TGG + chr7_3:12867625-12867644 Msa1093250:CDS 60.0%
GAGCGTCAGACCTCCTTTGG+TGG + chr7_3:12870909-12870928 Msa1093250:CDS 60.0%
GATGGGCGTCAGACCTCCAT+TGG + chr7_3:12874200-12874219 Msa1093250:intron 60.0%
TGCACGGGTACCCGTTGTTG+TGG + chr7_3:12874836-12874855 Msa1093250:intron 60.0%
TGGCGTCAGACCTCCTCTAG+AGG + chr7_3:12875450-12875469 Msa1093250:CDS 60.0%
GGGTGCCAGACTTCCTCCGA+TGG + chr7_3:12869411-12869430 Msa1093250:intron 65.0%
! GCACGGGGTACCCGTTGTTG+TGG + chr7_3:12873609-12873628 Msa1093250:intron 65.0%
GGGCGTCAGACCTCCATTGG+AGG + chr7_3:12874203-12874222 Msa1093250:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 12867580 12875494 12867580 ID=Msa1093250;Name=Msa1093250
chr7_3 mRNA 12867580 12875494 12867580 ID=Msa1093250-mRNA-1;Parent=Msa1093250;Name=Msa1093250-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.75|0.77|1|0.87|0.88|9|0|213
chr7_3 exon 12867580 12867670 12867580 ID=Msa1093250-mRNA-1:exon:3013;Parent=Msa1093250-mRNA-1
chr7_3 exon 12868658 12868738 12868658 ID=Msa1093250-mRNA-1:exon:3014;Parent=Msa1093250-mRNA-1
chr7_3 exon 12870166 12870246 12870166 ID=Msa1093250-mRNA-1:exon:3015;Parent=Msa1093250-mRNA-1
chr7_3 exon 12870907 12870954 12870907 ID=Msa1093250-mRNA-1:exon:3016;Parent=Msa1093250-mRNA-1
chr7_3 exon 12871800 12871880 12871800 ID=Msa1093250-mRNA-1:exon:3017;Parent=Msa1093250-mRNA-1
chr7_3 exon 12872536 12872583 12872536 ID=Msa1093250-mRNA-1:exon:3018;Parent=Msa1093250-mRNA-1
chr7_3 exon 12873459 12873539 12873459 ID=Msa1093250-mRNA-1:exon:3019;Parent=Msa1093250-mRNA-1
chr7_3 exon 12874687 12874767 12874687 ID=Msa1093250-mRNA-1:exon:3020;Parent=Msa1093250-mRNA-1
chr7_3 exon 12875448 12875494 12875448 ID=Msa1093250-mRNA-1:exon:3021;Parent=Msa1093250-mRNA-1
chr7_3 CDS 12867580 12867670 12867580 ID=Msa1093250-mRNA-1:cds;Parent=Msa1093250-mRNA-1
chr7_3 CDS 12868658 12868738 12868658 ID=Msa1093250-mRNA-1:cds;Parent=Msa1093250-mRNA-1
chr7_3 CDS 12870166 12870246 12870166 ID=Msa1093250-mRNA-1:cds;Parent=Msa1093250-mRNA-1
chr7_3 CDS 12870907 12870954 12870907 ID=Msa1093250-mRNA-1:cds;Parent=Msa1093250-mRNA-1
chr7_3 CDS 12871800 12871880 12871800 ID=Msa1093250-mRNA-1:cds;Parent=Msa1093250-mRNA-1
chr7_3 CDS 12872536 12872583 12872536 ID=Msa1093250-mRNA-1:cds;Parent=Msa1093250-mRNA-1
chr7_3 CDS 12873459 12873539 12873459 ID=Msa1093250-mRNA-1:cds;Parent=Msa1093250-mRNA-1
chr7_3 CDS 12874687 12874767 12874687 ID=Msa1093250-mRNA-1:cds;Parent=Msa1093250-mRNA-1
chr7_3 CDS 12875448 12875494 12875448 ID=Msa1093250-mRNA-1:cds;Parent=Msa1093250-mRNA-1
Gene Sequence

>Msa1093250

CCACATGCAGTTTCAATTATTAATGAAAAATTGAATGGTGGAGATGGGCATCATACCTCCTCTGGTGGAAACTTCACAGAAGAGGATCCAATTTCAATCATTAATGAAAAATTGAATGGTGGAGATGGACATCATACCTCCCCAGGTAAAAACTTCACGGAAGAGGATCCAATTTCAATTATTAATGAAATATTGAATGGTGGAGATCAACATCATACCTCTACCGGTGGAAACTTTACGGTAGAGAATCCAAATGAGCGTCAGACCTCCTTTGGTGGAAACTTCACGAAAGAGGATCCAATTTCAATTATTAATGAAATATTGAATGGTGAAGATCAACATCATACCTCTACCAGTGGAAACTTTACGGAAGAGAATACAAATGGGCATCAAACCTCCTTTGGAGGAAACTTCACGAAAGAGGATCCAATTTCAATTATTAATGAAATATTGAATGGTGGAGATCAACATCATACCTCTACCGGTGAAAATTTTACGGAAGAGAATCCAATTTCAATTATTAATGAAATATTGATTGGTGGAGATCAACATCATACCTCTACCGGTGGAAACTTTACGGAAGAGAATCCAAATTGGCGTCAGACCTCCTCTAGAGGAAACTTCACGAAAGAGGATCCA

Protein sequence

>Msa1093250

PHAVSIINEKLNGGDGHHTSSGGNFTEEDPISIINEKLNGGDGHHTSPGKNFTEEDPISIINEILNGGDQHHTSTGGNFTVENPNERQTSFGGNFTKEDPISIINEILNGEDQHHTSTSGNFTEENTNGHQTSFGGNFTKEDPISIINEILNGGDQHHTSTGENFTEENPISIINEILIGGDQHHTSTGGNFTEENPNWRQTSSRGNFTKEDP