AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1038040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038040 MtrunA17_Chr7g0275111 89.027 483 28 5 1 481 1 460 0.0 833
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038040 AT1G08550.2 78.862 369 77 1 114 481 94 462 0.0 601
Msa1038040 AT1G08550.1 78.862 369 77 1 114 481 94 462 0.0 601
Msa1038040 AT1G08550.3 78.862 369 77 1 114 481 94 462 0.0 601

Find 122 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAACTCATTCTTTATAAA+TGG 0.171780 7_1:+74820969 Msa1038040:three_prime_UTR
AATAATAATAATTATGTATA+TGG 0.253753 7_1:+74817237 Msa1038040:exon
CTGTGTGAAATTCATGTAAT+TGG 0.253755 7_1:-74819538 None:intergenic
CTGGTCTATTGTTGCAAGTT+TGG 0.257638 7_1:-74819163 None:intergenic
TGATGGAACAATCATTAAAA+TGG 0.294429 7_1:-74817738 None:intergenic
GATGAGGAAAATTTCTTAAG+AGG 0.305895 7_1:+74820750 Msa1038040:CDS
AATTATGTATATGGCAACTT+TGG 0.318217 7_1:+74817246 Msa1038040:exon
CATTAAAATGGAAACCAATA+TGG 0.319532 7_1:-74817726 None:intergenic
TAAAGAAGAAATGGAGATAC+TGG 0.333234 7_1:+74820779 Msa1038040:CDS
TGTGGAAAGGCTGGAGAAAA+AGG 0.341274 7_1:+74820590 Msa1038040:CDS
GATACTGGACAGTCTCAAAT+TGG 0.354853 7_1:+74820794 Msa1038040:CDS
AGGGTTATCTAAAGAAGAAA+TGG 0.355152 7_1:+74820770 Msa1038040:CDS
AATCCAAGTAGCTGCCATAT+TGG 0.365045 7_1:+74817712 Msa1038040:CDS
TTTGACAGGTATTACAAAAT+GGG 0.371393 7_1:+74817642 Msa1038040:intron
TGAAGAGTTAGAAGAGGAGG+TGG 0.376505 7_1:+74820647 Msa1038040:CDS
GAGGAAGTAGAAGAGCTCTT+TGG 0.381319 7_1:+74820822 Msa1038040:CDS
TCATGATTATAGAGGATTCC+TGG 0.387098 7_1:-74819665 None:intergenic
CCGTGGGATGTTTGAAGGAT+TGG 0.387680 7_1:-74817506 None:intergenic
TGCTTGTTGTTCTTGAAGAT+TGG 0.391049 7_1:+74817675 Msa1038040:CDS
TCTCCCACATCAGATTTCTT+AGG 0.394772 7_1:-74819404 None:intergenic
CTTACCCGTGGGATGTTTGA+AGG 0.396877 7_1:-74817511 None:intergenic
TTACGTACGCAGGGTAGAAT+TGG 0.398619 7_1:+74819094 Msa1038040:intron
AAGATTCTCCTCTCCCTTTG+TGG 0.398745 7_1:-74817480 None:intergenic
TATTACAAAATGGGGTGAAT+AGG 0.403876 7_1:+74817651 Msa1038040:CDS
TTCACAAGGACATCCGGGTT+TGG 0.405604 7_1:-74819437 None:intergenic
AAGCTCTTCACAAGGACATC+CGG 0.409378 7_1:-74819443 None:intergenic
ACAGAATCAAATAAACTTGT+TGG 0.412183 7_1:+74819557 Msa1038040:CDS
CGTGGGATGTTTGAAGGATT+GGG 0.415113 7_1:-74817505 None:intergenic
ATTATGTATATGGCAACTTT+GGG 0.419532 7_1:+74817247 Msa1038040:exon
TTCGCCGCTCTATCAAGTTC+AGG 0.422854 7_1:-74820501 None:intergenic
ACCAGTCATCTTGATAGTTA+AGG 0.425692 7_1:-74819697 None:intergenic
GTTAGAAGAGGAGGTGGAGA+AGG 0.433135 7_1:+74820653 Msa1038040:CDS
ACTCATTATCATGATTATAG+AGG 0.437878 7_1:-74819673 None:intergenic
TCATCGTAATTCTCGCGGTT+CGG 0.440844 7_1:+74817438 Msa1038040:CDS
AGTTCAGGAATAATAGATTC+AGG 0.446993 7_1:-74820486 None:intergenic
GTTCAAGATCCTTCATATCC+AGG 0.447140 7_1:+74819647 Msa1038040:CDS
CAGAAATGACCTTGTTAGAA+AGG 0.448118 7_1:+74820697 Msa1038040:CDS
GCCTTCCATTGTGGAAAGGC+TGG 0.448724 7_1:+74820581 Msa1038040:CDS
AATATTATCTTTAGAAGTGA+TGG 0.453607 7_1:+74817280 Msa1038040:CDS
ATGAGGAAAATTTCTTAAGA+GGG 0.453670 7_1:+74820751 Msa1038040:CDS
CCCAGGCATCGTTTCTGCCT+CGG 0.454906 7_1:-74820419 None:intergenic
CTTTGTGGTGGTGTTGACAT+TGG 0.456892 7_1:-74817465 None:intergenic
AAACCAATATGGCAGCTACT+TGG 0.458398 7_1:-74817715 None:intergenic
AGGACATCCGGGTTTGGAAC+AGG 0.461375 7_1:-74819431 None:intergenic
CAGATGGTGGATTTCTTACA+AGG 0.464565 7_1:+74819606 Msa1038040:CDS
AGAAGAGGAGGTGGAGAAGG+AGG 0.466120 7_1:+74820656 Msa1038040:CDS
AATGACCTTGTTAGAAAGGC+TGG 0.466564 7_1:+74820701 Msa1038040:CDS
ACCGAGGCAGAAACGATGCC+TGG 0.468845 7_1:+74820418 Msa1038040:CDS
TATATAAATATATAATCATC+TGG 0.469487 7_1:-74820393 None:intergenic
ACTTGGCATTCAGTCTCATC+TGG 0.476003 7_1:-74819182 None:intergenic
GAGAAGGAGGTAGAGAAGGT+TGG 0.481401 7_1:+74820669 Msa1038040:CDS
TCCAGCCTTTCCACAATGGA+AGG 0.485251 7_1:-74820582 None:intergenic
CTTGTAAGAAATCCACCATC+TGG 0.490114 7_1:-74819605 None:intergenic
AGCTCTTCACAAGGACATCC+GGG 0.492212 7_1:-74819442 None:intergenic
TTGGACGTGCCTTGCCGCTA+AGG 0.495177 7_1:+74820841 Msa1038040:CDS
GGTGGAGAAGGAGGTAGAGA+AGG 0.496841 7_1:+74820665 Msa1038040:CDS
AGAATTTCCTGTTCCAAACC+CGG 0.504891 7_1:+74819424 Msa1038040:CDS
AATGTCAACACCACCACAAA+GGG 0.512415 7_1:+74817467 Msa1038040:CDS
CTTTCCACAATGGAAGGCTC+TGG 0.512849 7_1:-74820576 None:intergenic
TAGAGGATTCCTGGATATGA+AGG 0.513757 7_1:-74819656 None:intergenic
GCAATGTTGGCAGCACATGA+TGG 0.519953 7_1:-74819134 None:intergenic
CAGTCAAAGGCATCGAATGT+AGG 0.522113 7_1:-74819515 None:intergenic
TAAAGTGTTTCAAGAAGATG+AGG 0.526393 7_1:+74820734 Msa1038040:CDS
TTCTGCCAGCCTTTCTAACA+AGG 0.527062 7_1:-74820706 None:intergenic
AGTTATCTTAGTTTCCTTAG+CGG 0.539269 7_1:-74820855 None:intergenic
GGCAGAAACGATGCCTGGGA+TGG 0.540731 7_1:+74820423 Msa1038040:CDS
AGTTTGGAGACAAGCAATGT+TGG 0.543150 7_1:-74819147 None:intergenic
TATTGAATGAATTCTCATGT+TGG 0.544818 7_1:+74820930 Msa1038040:three_prime_UTR
CAATGTTGGCAGCACATGAT+GGG 0.546394 7_1:-74819133 None:intergenic
GGAAGTTGAAGAGTTAGAAG+AGG 0.548339 7_1:+74820641 Msa1038040:CDS
ACCTTAACTATCAAGATGAC+TGG 0.550190 7_1:+74819696 Msa1038040:CDS
TTCATGTAATTGGCAGTCAA+AGG 0.550423 7_1:-74819528 None:intergenic
GATAGAGCGGCGAAGAGTGT+AGG 0.550668 7_1:+74820510 Msa1038040:CDS
AGTTGAAGAGTTAGAAGAGG+AGG 0.551351 7_1:+74820644 Msa1038040:CDS
GCATCAACAGCATCAGCTGA+TGG 0.551936 7_1:-74817755 None:intergenic
ACTGCCACAGTACTACTACT+AGG 0.555129 7_1:-74817358 None:intergenic
TTGTTAGAAAGGCTGGCAGA+AGG 0.560265 7_1:+74820708 Msa1038040:CDS
CCAATCCTTCAAACATCCCA+CGG 0.560307 7_1:+74817506 Msa1038040:CDS
TCTTAGTTTCCTTAGCGGCA+AGG 0.562825 7_1:-74820850 None:intergenic
ATTCTCCTCTCCCTTTGTGG+TGG 0.565315 7_1:-74817477 None:intergenic
TCAGGTCACATTTGGATGTG+AGG 0.567777 7_1:+74817196 Msa1038040:five_prime_UTR
CTTAAAGGTGTCAAAGAATG+TGG 0.568773 7_1:+74821046 Msa1038040:three_prime_UTR
TGTTAGAAAGGCTGGCAGAA+GGG 0.570141 7_1:+74820709 Msa1038040:CDS
GGCACCACCATAGCCATCCC+AGG 0.571683 7_1:-74820436 None:intergenic
AGAAATCCACCATCTGGAGT+TGG 0.580800 7_1:-74819599 None:intergenic
AACGATGCCTGGGATGGCTA+TGG 0.580936 7_1:+74820429 Msa1038040:CDS
CTCTTCAACTTCCCTCACAA+TGG 0.580964 7_1:-74820631 None:intergenic
TTGACAGGTATTACAAAATG+GGG 0.581732 7_1:+74817643 Msa1038040:intron
CAGTCTCAAATTGGAAGCTG+AGG 0.583038 7_1:+74820803 Msa1038040:CDS
TTTCTCCAGCCTTTCCACAA+TGG 0.585799 7_1:-74820586 None:intergenic
CTTAAGAAATGCAATCGTGT+AGG 0.591361 7_1:-74817412 None:intergenic
ATCTTGAACAAATTTCTGCA+CGG 0.591441 7_1:-74819633 None:intergenic
CTTGTTTGCTCAAAGAATGC+AGG 0.593029 7_1:+74817792 Msa1038040:CDS
GGCAAGTGGTTCATCACTAG+TGG 0.595900 7_1:+74819485 Msa1038040:CDS
CAACACCACCACAAAGGGAG+AGG 0.598178 7_1:+74817472 Msa1038040:CDS
TATTCCTGAACTTGATAGAG+CGG 0.601431 7_1:+74820497 Msa1038040:CDS
CCGAGGCAGAAACGATGCCT+GGG 0.602451 7_1:+74820419 Msa1038040:CDS
TGGACCAGAGCCTTCCATTG+TGG 0.604287 7_1:+74820572 Msa1038040:CDS
AACTTGTTGGTAATATAACA+TGG 0.607222 7_1:+74819570 Msa1038040:CDS
TTATCTTTAGAAGTGATGGA+AGG 0.607789 7_1:+74817284 Msa1038040:CDS
AGGAGAGAAAACCATTGTGA+GGG 0.613949 7_1:+74820620 Msa1038040:CDS
CAGAGCCTTCCATTGTGGAA+AGG 0.614887 7_1:+74820577 Msa1038040:CDS
TCAATGAGTGCGCTGTATCG+AGG 0.615628 7_1:+74819369 Msa1038040:CDS
CTTCTTCTAAATTTGCAAGG+TGG 0.622005 7_1:+74817086 None:intergenic
CAATATTAAAGCTCTTCACA+AGG 0.624985 7_1:-74819451 None:intergenic
GATGCCTGGGATGGCTATGG+TGG 0.626359 7_1:+74820432 Msa1038040:CDS
CAATGTCAACACCACCACAA+AGG 0.627156 7_1:+74817466 Msa1038040:CDS
TGGAGGATACCAACTCCAGA+TGG 0.629230 7_1:+74819590 Msa1038040:CDS
AGACATCATCGTAATTCTCG+CGG 0.630016 7_1:+74817433 Msa1038040:CDS
CAATCCTTCAAACATCCCAC+GGG 0.630475 7_1:+74817507 Msa1038040:CDS
AAGGAGAGAAAACCATTGTG+AGG 0.639539 7_1:+74820619 Msa1038040:CDS
ATCAGAACAGATAACACATG+TGG 0.650232 7_1:+74820552 Msa1038040:CDS
AGGATACCAACTCCAGATGG+TGG 0.651782 7_1:+74819593 Msa1038040:CDS
CAACAGCAACAGCAACAGCA+AGG 0.653355 7_1:+74817323 Msa1038040:CDS
TATATATTTATATACTACCG+AGG 0.662016 7_1:+74820402 Msa1038040:CDS
TGTGCCTAAGAAATCTGATG+TGG 0.670104 7_1:+74819400 Msa1038040:CDS
GGATGTGTTTGAAAACAAAG+TGG 0.674134 7_1:+74819337 Msa1038040:CDS
TTCTCCTAGTAGTAGTACTG+TGG 0.674684 7_1:+74817354 Msa1038040:CDS
TGCACTCCTTGTGTACACAA+CGG 0.678381 7_1:-74820457 None:intergenic
GTGGTGCCGTTGTGTACACA+AGG 0.721149 7_1:+74820451 Msa1038040:CDS
GTGCCTAAGAAATCTGATGT+GGG 0.729699 7_1:+74819401 Msa1038040:CDS
TTGTTGGTAATATAACATGG+AGG 0.766559 7_1:+74819573 Msa1038040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATCTTTTATTATAGAAAT+AGG - chr7_1:74819972-74819991 None:intergenic 10.0%
!! TATATAAATATATAATCATC+TGG - chr7_1:74820396-74820415 None:intergenic 10.0%
!!! AATTTTACATTTTTTCACTA+TGG - chr7_1:74817586-74817605 None:intergenic 15.0%
!!! GAAATTGATTTTAATTTGTT+TGG + chr7_1:74818733-74818752 Msa1038040:intron 15.0%
!!! TTATTTTTATTATGGTTTTG+AGG - chr7_1:74819055-74819074 None:intergenic 15.0%
!!! TAATTTTATAGATCAAATGT+GGG + chr7_1:74819315-74819334 Msa1038040:intron 15.0%
!! ATATATGTCACAAAAAAATT+TGG + chr7_1:74820999-74821018 Msa1038040:three_prime_UTR 15.0%
!!! AAGAATTCATTTTATCTTAA+AGG + chr7_1:74821031-74821050 Msa1038040:three_prime_UTR 15.0%
!!! AATATTATCTTTAGAAGTGA+TGG + chr7_1:74817280-74817299 Msa1038040:CDS 20.0%
!! AAGGTAAAATGATTTATGTT+TGG - chr7_1:74818226-74818245 None:intergenic 20.0%
!!! AAAATTGATTTTGACATGTT+TGG - chr7_1:74818417-74818436 None:intergenic 20.0%
!! TAGAGTTAATTCTAATTTGA+AGG - chr7_1:74818867-74818886 None:intergenic 20.0%
!! TTCAAATTAGAATTAACTCT+AGG + chr7_1:74818866-74818885 Msa1038040:intron 20.0%
!! TCAAATTAGAATTAACTCTA+GGG + chr7_1:74818867-74818886 Msa1038040:intron 20.0%
!!! ATTGATTTTGATATGTTTGA+AGG - chr7_1:74818921-74818940 None:intergenic 20.0%
!!! GTAATTTTATAGATCAAATG+TGG + chr7_1:74819314-74819333 Msa1038040:intron 20.0%
!!! AATTTTATAGATCAAATGTG+GGG + chr7_1:74819316-74819335 Msa1038040:intron 20.0%
!!! TTTAATATTGCAGATTTTAG+TGG + chr7_1:74819464-74819483 Msa1038040:CDS 20.0%
!!! CTTTTTTTTTTTCCTTAAGT+TGG - chr7_1:74819879-74819898 None:intergenic 20.0%
!! CAACTTAAGGAAAAAAAAAA+AGG + chr7_1:74819877-74819896 Msa1038040:intron 20.0%
!! TATATATTTATATACTACCG+AGG + chr7_1:74820402-74820421 Msa1038040:CDS 20.0%
!! ATCAACTCATTCTTTATAAA+TGG + chr7_1:74820969-74820988 Msa1038040:three_prime_UTR 20.0%
!!! ATTTTTTTGTGACATATATG+AGG - chr7_1:74820998-74821017 None:intergenic 20.0%
!!! TATTGTTGTTCTGTATTTTC+AGG + chr7_1:74817178-74817197 Msa1038040:five_prime_UTR 25.0%
! AATTATGTATATGGCAACTT+TGG + chr7_1:74817246-74817265 Msa1038040:exon 25.0%
! ATTATGTATATGGCAACTTT+GGG + chr7_1:74817247-74817266 Msa1038040:exon 25.0%
!!! TATCCAATTTTCATTTTGAC+AGG + chr7_1:74817628-74817647 Msa1038040:intron 25.0%
! ATACCTGTCAAAATGAAAAT+TGG - chr7_1:74817634-74817653 None:intergenic 25.0%
!! TTTTGACAGGTATTACAAAA+TGG + chr7_1:74817641-74817660 Msa1038040:intron 25.0%
! TTTGACAGGTATTACAAAAT+GGG + chr7_1:74817642-74817661 Msa1038040:intron 25.0%
! CATTAAAATGGAAACCAATA+TGG - chr7_1:74817729-74817748 None:intergenic 25.0%
! TGATGGAACAATCATTAAAA+TGG - chr7_1:74817741-74817760 None:intergenic 25.0%
! AAAAACTAAGCACTAACATT+TGG - chr7_1:74817848-74817867 None:intergenic 25.0%
!!! ATGTTAGTGCTTAGTTTTTT+AGG + chr7_1:74817849-74817868 Msa1038040:intron 25.0%
! ATAGCTAAAGAGTTATATGT+AGG - chr7_1:74817916-74817935 None:intergenic 25.0%
! CTTGAAGTTAGAATCAATTA+TGG + chr7_1:74818379-74818398 Msa1038040:intron 25.0%
!! ATTGATTCTAACTTGAAGTT+AGG + chr7_1:74818789-74818808 Msa1038040:intron 25.0%
! TCTAATTTGAAGGTAGAATT+TGG - chr7_1:74818857-74818876 None:intergenic 25.0%
! CAAATTAGAATTAACTCTAG+GGG + chr7_1:74818868-74818887 Msa1038040:intron 25.0%
! GTAATGTATTAGTATGTGTA+TGG - chr7_1:74819033-74819052 None:intergenic 25.0%
! CAATGAAATATGAATGGTAA+AGG - chr7_1:74819236-74819255 None:intergenic 25.0%
! ACAGAATCAAATAAACTTGT+TGG + chr7_1:74819557-74819576 Msa1038040:CDS 25.0%
!!! AACTTGTTGGTAATATAACA+TGG + chr7_1:74819570-74819589 Msa1038040:CDS 25.0%
! ACTCATTATCATGATTATAG+AGG - chr7_1:74819676-74819695 None:intergenic 25.0%
!! ATTTTGAATAGCAAAATGCT+AGG - chr7_1:74819821-74819840 None:intergenic 25.0%
!!! TAGCATTTTGCTATTCAAAA+TGG + chr7_1:74819820-74819839 Msa1038040:intron 25.0%
! ACAGACTTCAACAAATATAA+AGG - chr7_1:74820303-74820322 None:intergenic 25.0%
! ATGAGGAAAATTTCTTAAGA+GGG + chr7_1:74820751-74820770 Msa1038040:CDS 25.0%
! TATTGAATGAATTCTCATGT+TGG + chr7_1:74820930-74820949 Msa1038040:three_prime_UTR 25.0%
! TTATCTTTAGAAGTGATGGA+AGG + chr7_1:74817284-74817303 Msa1038040:CDS 30.0%
TTGACAGGTATTACAAAATG+GGG + chr7_1:74817643-74817662 Msa1038040:intron 30.0%
TATTACAAAATGGGGTGAAT+AGG + chr7_1:74817651-74817670 Msa1038040:CDS 30.0%
ACATTTGGCAATAAACAAAC+AGG - chr7_1:74817833-74817852 None:intergenic 30.0%
ATATAACTCTTTAGCTATCC+CGG + chr7_1:74817918-74817937 Msa1038040:intron 30.0%
CAAACATGCACTTATATCAT+CGG - chr7_1:74817970-74817989 None:intergenic 30.0%
GATGATATAAGTGCATGTTT+GGG + chr7_1:74817969-74817988 Msa1038040:intron 30.0%
GCGGTGATAAAAAATGATAT+AGG + chr7_1:74817993-74818012 Msa1038040:intron 30.0%
TGATCCAATAAGTGTTTGTT+TGG + chr7_1:74818027-74818046 Msa1038040:intron 30.0%
GTAACCAAACAAACACTTAT+TGG - chr7_1:74818034-74818053 None:intergenic 30.0%
AGATGGGTCAAAATTGATTA+TGG + chr7_1:74818060-74818079 Msa1038040:intron 30.0%
!!! GGAATTGATTTTGAGATGTT+TGG + chr7_1:74818089-74818108 Msa1038040:intron 30.0%
!! TTAGTGTATGTTTTGTTCTG+CGG - chr7_1:74818312-74818331 None:intergenic 30.0%
GAAGTTAGAATCAATTATGG+AGG + chr7_1:74818382-74818401 Msa1038040:intron 30.0%
!!! ATCAATTTTGACTGCTACAA+AGG + chr7_1:74818428-74818447 Msa1038040:intron 30.0%
! GAATTGAGTTAGCTTATGTT+TGG - chr7_1:74818464-74818483 None:intergenic 30.0%
! AGTTCTTAACTCTCTTTTAG+TGG + chr7_1:74818485-74818504 Msa1038040:intron 30.0%
CATTGCAAATTTGCAATACA+TGG - chr7_1:74818512-74818531 None:intergenic 30.0%
CATTGAAGAGAAATTGAACA+GGG - chr7_1:74818549-74818568 None:intergenic 30.0%
! GTGAGTTTAGAATCTAAGTT+GGG - chr7_1:74818578-74818597 None:intergenic 30.0%
! AGTGAGTTTAGAATCTAAGT+TGG - chr7_1:74818579-74818598 None:intergenic 30.0%
ATACATTGTGGAGTTAAAGT+CGG - chr7_1:74818613-74818632 None:intergenic 30.0%
ATACACTTATTACACCATCT+CGG - chr7_1:74818668-74818687 None:intergenic 30.0%
AATTTGAAGGTAGAATTTGG+AGG - chr7_1:74818854-74818873 None:intergenic 30.0%
! AAACCTTATTTGTGTGTGTT+TGG - chr7_1:74818960-74818979 None:intergenic 30.0%
!! ATGAAGTTGATGTAAAGTAG+AGG - chr7_1:74819212-74819231 None:intergenic 30.0%
GGTGTACAATGAAATATGAA+TGG - chr7_1:74819242-74819261 None:intergenic 30.0%
CAATATTAAAGCTCTTCACA+AGG - chr7_1:74819454-74819473 None:intergenic 30.0%
CTGTGTGAAATTCATGTAAT+TGG - chr7_1:74819541-74819560 None:intergenic 30.0%
!! TTGTTGGTAATATAACATGG+AGG + chr7_1:74819573-74819592 Msa1038040:CDS 30.0%
ATCTTGAACAAATTTCTGCA+CGG - chr7_1:74819636-74819655 None:intergenic 30.0%
TTACTAACCTAAACATGTGT+AGG + chr7_1:74819753-74819772 Msa1038040:intron 30.0%
CATTATACCTACACATGTTT+AGG - chr7_1:74819763-74819782 None:intergenic 30.0%
CTAAACATGTGTAGGTATAA+TGG + chr7_1:74819761-74819780 Msa1038040:intron 30.0%
! TAAATGTCACTTCCAACTTA+AGG + chr7_1:74819864-74819883 Msa1038040:intron 30.0%
ATTTGTTTCCACAAGCTATT+CGG + chr7_1:74820024-74820043 Msa1038040:intron 30.0%
AATAAGCTGAAAACAGCTTA+TGG + chr7_1:74820060-74820079 Msa1038040:intron 30.0%
AATCATGAATTCTCATACAC+TGG - chr7_1:74820236-74820255 None:intergenic 30.0%
! CATGATTTTCTGTTACCTTT+AGG + chr7_1:74820249-74820268 Msa1038040:intron 30.0%
! TATTTGTTGAAGTCTGTCTT+TGG + chr7_1:74820306-74820325 Msa1038040:intron 30.0%
CTGATTGTAAATCCTCTATA+TGG - chr7_1:74820332-74820351 None:intergenic 30.0%
AGTTCAGGAATAATAGATTC+AGG - chr7_1:74820489-74820508 None:intergenic 30.0%
! TAAAGTGTTTCAAGAAGATG+AGG + chr7_1:74820734-74820753 Msa1038040:CDS 30.0%
GATGAGGAAAATTTCTTAAG+AGG + chr7_1:74820750-74820769 Msa1038040:CDS 30.0%
AGGGTTATCTAAAGAAGAAA+TGG + chr7_1:74820770-74820789 Msa1038040:CDS 30.0%
TAAAGAAGAAATGGAGATAC+TGG + chr7_1:74820779-74820798 Msa1038040:CDS 30.0%
AGTTATCTTAGTTTCCTTAG+CGG - chr7_1:74820858-74820877 None:intergenic 30.0%
! TGATTTTTCTGTTTGGATTC+TGG + chr7_1:74821074-74821093 Msa1038040:three_prime_UTR 30.0%
!!! CTGTATTTTCAGGTCACATT+TGG + chr7_1:74817188-74817207 Msa1038040:five_prime_UTR 35.0%
CTTAAGAAATGCAATCGTGT+AGG - chr7_1:74817415-74817434 None:intergenic 35.0%
TTACTTACTTACTTACCCGT+GGG - chr7_1:74817525-74817544 None:intergenic 35.0%
!! TGCTTGTTGTTCTTGAAGAT+TGG + chr7_1:74817675-74817694 Msa1038040:CDS 35.0%
!!! AGTGCTTAGTTTTTTAGGCA+AGG + chr7_1:74817854-74817873 Msa1038040:intron 35.0%
GCTAAAGAGTTATATGTAGG+CGG - chr7_1:74817913-74817932 None:intergenic 35.0%
CGATGATATAAGTGCATGTT+TGG + chr7_1:74817968-74817987 Msa1038040:intron 35.0%
TGTTTGGTTACACTTGTAGA+TGG + chr7_1:74818043-74818062 Msa1038040:intron 35.0%
GTTTGGTTACACTTGTAGAT+GGG + chr7_1:74818044-74818063 Msa1038040:intron 35.0%
TGGGTCAAAATTGATTATGG+AGG + chr7_1:74818063-74818082 Msa1038040:intron 35.0%
CAAAATTGATTATGGAGGTG+TGG + chr7_1:74818068-74818087 Msa1038040:intron 35.0%
! CAGACTAAAAAGTGAGTTGA+AGG - chr7_1:74818245-74818264 None:intergenic 35.0%
CCATTGAAGAGAAATTGAAC+AGG - chr7_1:74818550-74818569 None:intergenic 35.0%
CCTGTTCAATTTCTCTTCAA+TGG + chr7_1:74818547-74818566 Msa1038040:intron 35.0%
GAACTCGTTCTTATACATTG+TGG - chr7_1:74818625-74818644 None:intergenic 35.0%
! TAGAATTAACTCTAGGGGTT+AGG + chr7_1:74818873-74818892 Msa1038040:intron 35.0%
GAACCAAACACACACAAATA+AGG + chr7_1:74818954-74818973 Msa1038040:intron 35.0%
! TTAGTATGTGTATGGTTCTG+AGG - chr7_1:74819025-74819044 None:intergenic 35.0%
TGTAAAGTAGAGGACTAACT+TGG - chr7_1:74819202-74819221 None:intergenic 35.0%
!! GTTCAGGTTCTTTTGGTAAT+TGG - chr7_1:74819263-74819282 None:intergenic 35.0%
ATTTCATGAGCAAAGAGTTC+AGG - chr7_1:74819279-74819298 None:intergenic 35.0%
GGATGTGTTTGAAAACAAAG+TGG + chr7_1:74819337-74819356 Msa1038040:CDS 35.0%
TTCATGTAATTGGCAGTCAA+AGG - chr7_1:74819531-74819550 None:intergenic 35.0%
TCATGATTATAGAGGATTCC+TGG - chr7_1:74819668-74819687 None:intergenic 35.0%
ACCTTAACTATCAAGATGAC+TGG + chr7_1:74819696-74819715 Msa1038040:CDS 35.0%
! ACCAGTCATCTTGATAGTTA+AGG - chr7_1:74819700-74819719 None:intergenic 35.0%
AAAAAGAGAGTTTCTGAGCA+AGG - chr7_1:74819727-74819746 None:intergenic 35.0%
TTTGTTTCCACAAGCTATTC+GGG + chr7_1:74820025-74820044 Msa1038040:intron 35.0%
!!! CCGTTTTAAGGTATGCATAT+GGG - chr7_1:74820179-74820198 None:intergenic 35.0%
CCCATATGCATACCTTAAAA+CGG + chr7_1:74820176-74820195 Msa1038040:intron 35.0%
!!! ACCGTTTTAAGGTATGCATA+TGG - chr7_1:74820180-74820199 None:intergenic 35.0%
! CATCTTGGTTACACATTTTG+AGG + chr7_1:74820207-74820226 Msa1038040:intron 35.0%
!! CCTTTCAGGTTTAGCTAAAA+GGG - chr7_1:74820278-74820297 None:intergenic 35.0%
!! ACCTTTCAGGTTTAGCTAAA+AGG - chr7_1:74820279-74820298 None:intergenic 35.0%
!! CAAATATAAAGGCACCTTTC+AGG - chr7_1:74820292-74820311 None:intergenic 35.0%
ATTTACAATCAGTGATCTGC+AGG + chr7_1:74820340-74820359 Msa1038040:intron 35.0%
TATTCCTGAACTTGATAGAG+CGG + chr7_1:74820497-74820516 Msa1038040:CDS 35.0%
ATCAGAACAGATAACACATG+TGG + chr7_1:74820552-74820571 Msa1038040:CDS 35.0%
CAGAAATGACCTTGTTAGAA+AGG + chr7_1:74820697-74820716 Msa1038040:CDS 35.0%
!! CTTAAAGGTGTCAAAGAATG+TGG + chr7_1:74821046-74821065 Msa1038040:three_prime_UTR 35.0%
TTCTCCTAGTAGTAGTACTG+TGG + chr7_1:74817354-74817373 Msa1038040:CDS 40.0%
AGACATCATCGTAATTCTCG+CGG + chr7_1:74817433-74817452 Msa1038040:CDS 40.0%
AATGTCAACACCACCACAAA+GGG + chr7_1:74817467-74817486 Msa1038040:CDS 40.0%
CTTACTTACTTACTTACCCG+TGG - chr7_1:74817526-74817545 None:intergenic 40.0%
AATCCAAGTAGCTGCCATAT+TGG + chr7_1:74817712-74817731 Msa1038040:CDS 40.0%
AAACCAATATGGCAGCTACT+TGG - chr7_1:74817718-74817737 None:intergenic 40.0%
CTTGTTTGCTCAAAGAATGC+AGG + chr7_1:74817792-74817811 Msa1038040:CDS 40.0%
!!! GCTTAGTTTTTTAGGCAAGG+AGG + chr7_1:74817857-74817876 Msa1038040:intron 40.0%
GCACTTATATCATCGGAGTT+AGG - chr7_1:74817963-74817982 None:intergenic 40.0%
TATAAGTGCATGTTTGGGTG+CGG + chr7_1:74817974-74817993 Msa1038040:intron 40.0%
TGTATGTTCGATTCCACCTT+TGG + chr7_1:74818683-74818702 Msa1038040:intron 40.0%
! ATCAATTTTGCCTCCTCCAA+AGG - chr7_1:74818702-74818721 None:intergenic 40.0%
!! CTTCCATTTTTACGTACGCA+GGG + chr7_1:74819085-74819104 Msa1038040:intron 40.0%
AGTTTGGAGACAAGCAATGT+TGG - chr7_1:74819150-74819169 None:intergenic 40.0%
CTGGTCTATTGTTGCAAGTT+TGG - chr7_1:74819166-74819185 None:intergenic 40.0%
!! GCAAAGAGTTCAGGTTCTTT+TGG - chr7_1:74819270-74819289 None:intergenic 40.0%
TGTGCCTAAGAAATCTGATG+TGG + chr7_1:74819400-74819419 Msa1038040:CDS 40.0%
GTGCCTAAGAAATCTGATGT+GGG + chr7_1:74819401-74819420 Msa1038040:CDS 40.0%
TCTCCCACATCAGATTTCTT+AGG - chr7_1:74819407-74819426 None:intergenic 40.0%
AGAATTTCCTGTTCCAAACC+CGG + chr7_1:74819424-74819443 Msa1038040:CDS 40.0%
!! TTGCAGATTTTAGTGGCAAG+TGG + chr7_1:74819471-74819490 Msa1038040:CDS 40.0%
CTTGTAAGAAATCCACCATC+TGG - chr7_1:74819608-74819627 None:intergenic 40.0%
!! CAGATGGTGGATTTCTTACA+AGG + chr7_1:74819606-74819625 Msa1038040:CDS 40.0%
GTTCAAGATCCTTCATATCC+AGG + chr7_1:74819647-74819666 Msa1038040:CDS 40.0%
TAGAGGATTCCTGGATATGA+AGG - chr7_1:74819659-74819678 None:intergenic 40.0%
CTAGGAACATATGCTTCATG+TGG - chr7_1:74819803-74819822 None:intergenic 40.0%
CTGAAAACAGCTTATGGACA+TGG + chr7_1:74820066-74820085 Msa1038040:intron 40.0%
AAGCATATGCGAGACTGTTT+GGG - chr7_1:74820115-74820134 None:intergenic 40.0%
TAAGCATATGCGAGACTGTT+TGG - chr7_1:74820116-74820135 None:intergenic 40.0%
! GATGCTAGAGAACCGTTTTA+AGG - chr7_1:74820191-74820210 None:intergenic 40.0%
AAAACGGTTCTCTAGCATCT+TGG + chr7_1:74820192-74820211 Msa1038040:intron 40.0%
TAGCTAAAAGGGTTGCCTAA+AGG - chr7_1:74820267-74820286 None:intergenic 40.0%
!! CCCTTTTAGCTAAACCTGAA+AGG + chr7_1:74820275-74820294 Msa1038040:intron 40.0%
AAGGAGAGAAAACCATTGTG+AGG + chr7_1:74820619-74820638 Msa1038040:CDS 40.0%
AGGAGAGAAAACCATTGTGA+GGG + chr7_1:74820620-74820639 Msa1038040:CDS 40.0%
GGAAGTTGAAGAGTTAGAAG+AGG + chr7_1:74820641-74820660 Msa1038040:CDS 40.0%
AGTTGAAGAGTTAGAAGAGG+AGG + chr7_1:74820644-74820663 Msa1038040:CDS 40.0%
AATGACCTTGTTAGAAAGGC+TGG + chr7_1:74820701-74820720 Msa1038040:CDS 40.0%
GATACTGGACAGTCTCAAAT+TGG + chr7_1:74820794-74820813 Msa1038040:CDS 40.0%
!! GGTGCTGTGATTTTTCTGTT+TGG + chr7_1:74821067-74821086 Msa1038040:three_prime_UTR 40.0%
TCAGGTCACATTTGGATGTG+AGG + chr7_1:74817196-74817215 Msa1038040:five_prime_UTR 45.0%
ACTGCCACAGTACTACTACT+AGG - chr7_1:74817361-74817380 None:intergenic 45.0%
TCATCGTAATTCTCGCGGTT+CGG + chr7_1:74817438-74817457 Msa1038040:CDS 45.0%
!! CTTTGTGGTGGTGTTGACAT+TGG - chr7_1:74817468-74817487 None:intergenic 45.0%
CAATGTCAACACCACCACAA+AGG + chr7_1:74817466-74817485 Msa1038040:CDS 45.0%
AAGATTCTCCTCTCCCTTTG+TGG - chr7_1:74817483-74817502 None:intergenic 45.0%
CGTGGGATGTTTGAAGGATT+GGG - chr7_1:74817508-74817527 None:intergenic 45.0%
CCAATCCTTCAAACATCCCA+CGG + chr7_1:74817506-74817525 Msa1038040:CDS 45.0%
CAATCCTTCAAACATCCCAC+GGG + chr7_1:74817507-74817526 Msa1038040:CDS 45.0%
ATGTTCGATTCCACCTTTGG+AGG + chr7_1:74818686-74818705 Msa1038040:intron 45.0%
! AATTTTGCCTCCTCCAAAGG+TGG - chr7_1:74818699-74818718 None:intergenic 45.0%
GGAGGCAAAATTGATCTCAG+AGG + chr7_1:74818707-74818726 Msa1038040:intron 45.0%
! TGTGTGTGTTTGGTTCGAAG+AGG - chr7_1:74818950-74818969 None:intergenic 45.0%
CCTGCGTACGTAAAAATGGA+AGG - chr7_1:74819087-74819106 None:intergenic 45.0%
!! CCTTCCATTTTTACGTACGC+AGG + chr7_1:74819084-74819103 Msa1038040:intron 45.0%
CTACCCTGCGTACGTAAAAA+TGG - chr7_1:74819091-74819110 None:intergenic 45.0%
TTACGTACGCAGGGTAGAAT+TGG + chr7_1:74819094-74819113 Msa1038040:intron 45.0%
CAATGTTGGCAGCACATGAT+GGG - chr7_1:74819136-74819155 None:intergenic 45.0%
ACTTGGCATTCAGTCTCATC+TGG - chr7_1:74819185-74819204 None:intergenic 45.0%
AAGCTCTTCACAAGGACATC+CGG - chr7_1:74819446-74819465 None:intergenic 45.0%
!! CAGTCAAAGGCATCGAATGT+AGG - chr7_1:74819518-74819537 None:intergenic 45.0%
! AGAAATCCACCATCTGGAGT+TGG - chr7_1:74819602-74819621 None:intergenic 45.0%
! AAGCTATTCGGGAGAGCTTT+TGG + chr7_1:74820036-74820055 Msa1038040:intron 45.0%
! GGTATGCATATGGGCTTGTT+TGG - chr7_1:74820170-74820189 None:intergenic 45.0%
GTCTGTCTTTGGCCATATAG+AGG + chr7_1:74820317-74820336 Msa1038040:intron 45.0%
TGCACTCCTTGTGTACACAA+CGG - chr7_1:74820460-74820479 None:intergenic 45.0%
TTTCTCCAGCCTTTCCACAA+TGG - chr7_1:74820589-74820608 None:intergenic 45.0%
TGTGGAAAGGCTGGAGAAAA+AGG + chr7_1:74820590-74820609 Msa1038040:CDS 45.0%
AAGGCTGGAGAAAAAGGTAG+AGG + chr7_1:74820596-74820615 Msa1038040:CDS 45.0%
CTGGAGAAAAAGGTAGAGGA+AGG + chr7_1:74820600-74820619 Msa1038040:CDS 45.0%
CTCTTCAACTTCCCTCACAA+TGG - chr7_1:74820634-74820653 None:intergenic 45.0%
TGAAGAGTTAGAAGAGGAGG+TGG + chr7_1:74820647-74820666 Msa1038040:CDS 45.0%
TTCTGCCAGCCTTTCTAACA+AGG - chr7_1:74820709-74820728 None:intergenic 45.0%
TTGTTAGAAAGGCTGGCAGA+AGG + chr7_1:74820708-74820727 Msa1038040:CDS 45.0%
TGTTAGAAAGGCTGGCAGAA+GGG + chr7_1:74820709-74820728 Msa1038040:CDS 45.0%
CAGTCTCAAATTGGAAGCTG+AGG + chr7_1:74820803-74820822 Msa1038040:CDS 45.0%
GAGGAAGTAGAAGAGCTCTT+TGG + chr7_1:74820822-74820841 Msa1038040:CDS 45.0%
TCTTAGTTTCCTTAGCGGCA+AGG - chr7_1:74820853-74820872 None:intergenic 45.0%
!! AATAATAATAATTATGTATA+TGG + chr7_1:74817237-74817256 Msa1038040:exon 5.0%
!!! CTATTATATTATTTTTATTA+TGG - chr7_1:74819063-74819082 None:intergenic 5.0%
!! CATAATAAAAATAATATAAT+AGG + chr7_1:74819061-74819080 Msa1038040:intron 5.0%
CAACAGCAACAGCAACAGCA+AGG + chr7_1:74817323-74817342 Msa1038040:CDS 50.0%
ATTCTCCTCTCCCTTTGTGG+TGG - chr7_1:74817480-74817499 None:intergenic 50.0%
CCGTGGGATGTTTGAAGGAT+TGG - chr7_1:74817509-74817528 None:intergenic 50.0%
CTTACCCGTGGGATGTTTGA+AGG - chr7_1:74817514-74817533 None:intergenic 50.0%
GCATCAACAGCATCAGCTGA+TGG - chr7_1:74817758-74817777 None:intergenic 50.0%
TAGGAGTAGCTCCATGGCAT+AGG - chr7_1:74817944-74817963 None:intergenic 50.0%
TGACTGCTACAAAGGACACG+AGG + chr7_1:74818436-74818455 Msa1038040:intron 50.0%
ACAAGAACGTGCATCCGAGA+TGG + chr7_1:74818651-74818670 Msa1038040:intron 50.0%
! TTCGATTCCACCTTTGGAGG+AGG + chr7_1:74818689-74818708 Msa1038040:intron 50.0%
GCAATGTTGGCAGCACATGA+TGG - chr7_1:74819137-74819156 None:intergenic 50.0%
TCAATGAGTGCGCTGTATCG+AGG + chr7_1:74819369-74819388 Msa1038040:CDS 50.0%
TTCACAAGGACATCCGGGTT+TGG - chr7_1:74819440-74819459 None:intergenic 50.0%
AGCTCTTCACAAGGACATCC+GGG - chr7_1:74819445-74819464 None:intergenic 50.0%
GGCAAGTGGTTCATCACTAG+TGG + chr7_1:74819485-74819504 Msa1038040:CDS 50.0%
TGGAGGATACCAACTCCAGA+TGG + chr7_1:74819590-74819609 Msa1038040:CDS 50.0%
AGGATACCAACTCCAGATGG+TGG + chr7_1:74819593-74819612 Msa1038040:CDS 50.0%
AAGCTCTCCCGAATAGCTTG+TGG - chr7_1:74820035-74820054 None:intergenic 50.0%
TTCGCCGCTCTATCAAGTTC+AGG - chr7_1:74820504-74820523 None:intergenic 50.0%
CTTTCCACAATGGAAGGCTC+TGG - chr7_1:74820579-74820598 None:intergenic 50.0%
CAGAGCCTTCCATTGTGGAA+AGG + chr7_1:74820577-74820596 Msa1038040:CDS 50.0%
TCCAGCCTTTCCACAATGGA+AGG - chr7_1:74820585-74820604 None:intergenic 50.0%
GTTAGAAGAGGAGGTGGAGA+AGG + chr7_1:74820653-74820672 Msa1038040:CDS 50.0%
GAGAAGGAGGTAGAGAAGGT+TGG + chr7_1:74820669-74820688 Msa1038040:CDS 50.0%
CAACACCACCACAAAGGGAG+AGG + chr7_1:74817472-74817491 Msa1038040:CDS 55.0%
AGTAGCTCCATGGCATAGGC+CGG - chr7_1:74817940-74817959 None:intergenic 55.0%
CGGAGTTAGGAGTAGCTCCA+TGG - chr7_1:74817950-74817969 None:intergenic 55.0%
! AGGACATCCGGGTTTGGAAC+AGG - chr7_1:74819434-74819453 None:intergenic 55.0%
AACGATGCCTGGGATGGCTA+TGG + chr7_1:74820429-74820448 Msa1038040:CDS 55.0%
!! GTGGTGCCGTTGTGTACACA+AGG + chr7_1:74820451-74820470 Msa1038040:CDS 55.0%
! GATAGAGCGGCGAAGAGTGT+AGG + chr7_1:74820510-74820529 Msa1038040:CDS 55.0%
TGGACCAGAGCCTTCCATTG+TGG + chr7_1:74820572-74820591 Msa1038040:CDS 55.0%
GCCTTCCATTGTGGAAAGGC+TGG + chr7_1:74820581-74820600 Msa1038040:CDS 55.0%
AGAAGAGGAGGTGGAGAAGG+AGG + chr7_1:74820656-74820675 Msa1038040:CDS 55.0%
GGTGGAGAAGGAGGTAGAGA+AGG + chr7_1:74820665-74820684 Msa1038040:CDS 55.0%
AGCTATCCCGGCCTATGCCA+TGG + chr7_1:74817930-74817949 Msa1038040:intron 60.0%
GTAGCTCCATGGCATAGGCC+GGG - chr7_1:74817939-74817958 None:intergenic 60.0%
ACCGAGGCAGAAACGATGCC+TGG + chr7_1:74820418-74820437 Msa1038040:CDS 60.0%
! CCCAGGCATCGTTTCTGCCT+CGG - chr7_1:74820422-74820441 None:intergenic 60.0%
CCGAGGCAGAAACGATGCCT+GGG + chr7_1:74820419-74820438 Msa1038040:CDS 60.0%
GGCAGAAACGATGCCTGGGA+TGG + chr7_1:74820423-74820442 Msa1038040:CDS 60.0%
GATGCCTGGGATGGCTATGG+TGG + chr7_1:74820432-74820451 Msa1038040:CDS 60.0%
TTGGACGTGCCTTGCCGCTA+AGG + chr7_1:74820841-74820860 Msa1038040:CDS 60.0%
GGCACCACCATAGCCATCCC+AGG - chr7_1:74820439-74820458 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 74817099 74821121 74817099 ID=Msa1038040;Name=Msa1038040
chr7_1 mRNA 74817099 74821121 74817099 ID=Msa1038040-mRNA-1;Parent=Msa1038040;Name=Msa1038040-mRNA-1;_AED=0.10;_eAED=0.10;_QI=151|1|1|1|1|1|5|246|481
chr7_1 exon 74817099 74817528 74817099 ID=Msa1038040-mRNA-1:exon:18921;Parent=Msa1038040-mRNA-1
chr7_1 exon 74817650 74817813 74817650 ID=Msa1038040-mRNA-1:exon:18922;Parent=Msa1038040-mRNA-1
chr7_1 exon 74819106 74819202 74819106 ID=Msa1038040-mRNA-1:exon:18923;Parent=Msa1038040-mRNA-1
chr7_1 exon 74819326 74819717 74819326 ID=Msa1038040-mRNA-1:exon:18924;Parent=Msa1038040-mRNA-1
chr7_1 exon 74820362 74821121 74820362 ID=Msa1038040-mRNA-1:exon:18925;Parent=Msa1038040-mRNA-1
chr7_1 five_prime_UTR 74817099 74817249 74817099 ID=Msa1038040-mRNA-1:five_prime_utr;Parent=Msa1038040-mRNA-1
chr7_1 CDS 74817250 74817528 74817250 ID=Msa1038040-mRNA-1:cds;Parent=Msa1038040-mRNA-1
chr7_1 CDS 74817650 74817813 74817650 ID=Msa1038040-mRNA-1:cds;Parent=Msa1038040-mRNA-1
chr7_1 CDS 74819106 74819202 74819106 ID=Msa1038040-mRNA-1:cds;Parent=Msa1038040-mRNA-1
chr7_1 CDS 74819326 74819717 74819326 ID=Msa1038040-mRNA-1:cds;Parent=Msa1038040-mRNA-1
chr7_1 CDS 74820362 74820875 74820362 ID=Msa1038040-mRNA-1:cds;Parent=Msa1038040-mRNA-1
chr7_1 three_prime_UTR 74820876 74821121 74820876 ID=Msa1038040-mRNA-1:three_prime_utr;Parent=Msa1038040-mRNA-1
Gene Sequence

>Msa1038040

ATGTATATGGCAACTTTGGGTGCAAACTCAAATATTATCTTTAGAAGTGATGGAAGGTTTCATAGAACAACAACAACAGCAACAGCAACAGCAAGGTTTCAATATTCTCCTAGTAGTAGTACTGTGGCAGTGTTCAAAGTATTGTCTACAACTAGAAAACAACCTACACGATTGCATTTCTTAAGACATCATCGTAATTCTCGCGGTTCGGTATGCCAATGTCAACACCACCACAAAGGGAGAGGAGAATCTTCTCCCAATCCTTCAAACATCCCACGGGTATTACAAAATGGGGTGAATAGGATGCTTGTTGTTCTTGAAGATTGGAGAAATTCACGCATAATCCAAGTAGCTGCCATATTGGTTTCCATTTTAATGATTGTTCCATCAGCTGATGCTGTTGATGCACTCAAAACTTGTGCTTGTTTGCTCAAAGAATGCAGGGTAGAATTGGCTAAGTGTCTTGCAAACCCATCATGTGCTGCCAACATTGCTTGTCTCCAAACTTGCAACAATAGACCAGATGAGACTGAATGCCAAATCAAATGTGGGGATGTGTTTGAAAACAAAGTGGTTGATGAATTCAATGAGTGCGCTGTATCGAGGAAGAAATGTGTGCCTAAGAAATCTGATGTGGGAGAATTTCCTGTTCCAAACCCGGATGTCCTTGTGAAGAGCTTTAATATTGCAGATTTTAGTGGCAAGTGGTTCATCACTAGTGGCTTAAATCCTACATTCGATGCCTTTGACTGCCAATTACATGAATTTCACACAGAATCAAATAAACTTGTTGGTAATATAACATGGAGGATACCAACTCCAGATGGTGGATTTCTTACAAGGTCAGCCGTGCAGAAATTTGTTCAAGATCCTTCATATCCAGGAATCCTCTATAATCATGATAATGAGTACCTTAACTATCAAGATGACTGGTATGTCGTGTCATCTCAAATTGAGAATAAACCAGATGATTATATATTTATATACTACCGAGGCAGAAACGATGCCTGGGATGGCTATGGTGGTGCCGTTGTGTACACAAGGAGTGCAGTTTTACCTGAATCTATTATTCCTGAACTTGATAGAGCGGCGAAGAGTGTAGGAAGAGACTTTAGCAAGTTCATCAGAACAGATAACACATGTGGACCAGAGCCTTCCATTGTGGAAAGGCTGGAGAAAAAGGTAGAGGAAGGAGAGAAAACCATTGTGAGGGAAGTTGAAGAGTTAGAAGAGGAGGTGGAGAAGGAGGTAGAGAAGGTTGGTAAAACAGAAATGACCTTGTTAGAAAGGCTGGCAGAAGGGTTTAAAGTGTTTCAAGAAGATGAGGAAAATTTCTTAAGAGGGTTATCTAAAGAAGAAATGGAGATACTGGACAGTCTCAAATTGGAAGCTGAGGAAGTAGAAGAGCTCTTTGGACGTGCCTTGCCGCTAAGGAAACTAAGATAA

Protein sequence

>Msa1038040

MYMATLGANSNIIFRSDGRFHRTTTTATATARFQYSPSSSTVAVFKVLSTTRKQPTRLHFLRHHRNSRGSVCQCQHHHKGRGESSPNPSNIPRVLQNGVNRMLVVLEDWRNSRIIQVAAILVSILMIVPSADAVDALKTCACLLKECRVELAKCLANPSCAANIACLQTCNNRPDETECQIKCGDVFENKVVDEFNECAVSRKKCVPKKSDVGEFPVPNPDVLVKSFNIADFSGKWFITSGLNPTFDAFDCQLHEFHTESNKLVGNITWRIPTPDGGFLTRSAVQKFVQDPSYPGILYNHDNEYLNYQDDWYVVSSQIENKPDDYIFIYYRGRNDAWDGYGGAVVYTRSAVLPESIIPELDRAAKSVGRDFSKFIRTDNTCGPEPSIVERLEKKVEEGEKTIVREVEELEEEVEKEVEKVGKTEMTLLERLAEGFKVFQEDEENFLRGLSKEEMEILDSLKLEAEEVEELFGRALPLRKLR*