Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281220 | sp|Q8VYJ2|AHL1_ARATH | 55.705 | 298 | 114 | 7 | 11 | 292 | 22 | 317 | 7.46e-90 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281220 | A0A072TPB2 | 94.722 | 360 | 16 | 1 | 1 | 360 | 1 | 357 | 0.0 | 612 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006050 | Msa1281220 | -0.809488 | 1.846096e-50 | -8.615850e-47 |
| Msa0017980 | Msa1281220 | -0.829821 | 4.153917e-55 | -8.615850e-47 |
| Msa0021240 | Msa1281220 | -0.843674 | 1.212017e-58 | -8.615850e-47 |
| Msa0025340 | Msa1281220 | -0.820520 | 6.567985e-53 | -8.615850e-47 |
| Msa0028050 | Msa1281220 | -0.814507 | 1.487785e-51 | -8.615850e-47 |
| Msa0028450 | Msa1281220 | -0.800390 | 1.474069e-48 | -8.615850e-47 |
| Msa0030760 | Msa1281220 | -0.805267 | 1.450026e-49 | -8.615850e-47 |
| Msa0032990 | Msa1281220 | -0.837749 | 4.325216e-57 | -8.615850e-47 |
| Msa0039590 | Msa1281220 | -0.808991 | 2.359143e-50 | -8.615850e-47 |
| Msa0045530 | Msa1281220 | -0.821823 | 3.289967e-53 | -8.615850e-47 |
| Msa0046090 | Msa1281220 | -0.823707 | 1.198461e-53 | -8.615850e-47 |
| Msa0058140 | Msa1281220 | -0.812015 | 5.242188e-51 | -8.615850e-47 |
| Msa0067820 | Msa1281220 | -0.802688 | 4.981006e-49 | -8.615850e-47 |
| Msa0074220 | Msa1281220 | -0.815622 | 8.413378e-52 | -8.615850e-47 |
| Msa0078170 | Msa1281220 | -0.827778 | 1.296562e-54 | -8.615850e-47 |
| Msa0093830 | Msa1281220 | -0.806423 | 8.285089e-50 | -8.615850e-47 |
| Msa0097730 | Msa1281220 | -0.832415 | 9.575567e-56 | -8.615850e-47 |
| Msa0101150 | Msa1281220 | -0.805171 | 1.518448e-49 | -8.615850e-47 |
| Msa0101210 | Msa1281220 | -0.807661 | 4.532996e-50 | -8.615850e-47 |
| Msa0113910 | Msa1281220 | -0.851439 | 8.866229e-61 | -8.615850e-47 |
| Msa0115950 | Msa1281220 | -0.840662 | 7.595723e-58 | -8.615850e-47 |
| Msa0118250 | Msa1281220 | -0.800581 | 1.347598e-48 | -8.615850e-47 |
| Msa0606180 | Msa1281220 | -0.807293 | 5.424999e-50 | -8.615850e-47 |
| Msa0612890 | Msa1281220 | -0.814297 | 1.654917e-51 | -8.615850e-47 |
| Msa0614020 | Msa1281220 | -0.807188 | 5.709201e-50 | -8.615850e-47 |
| Msa0625900 | Msa1281220 | -0.813019 | 3.164170e-51 | -8.615850e-47 |
| Msa0632040 | Msa1281220 | -0.808163 | 3.544174e-50 | -8.615850e-47 |
| Msa0636840 | Msa1281220 | -0.814917 | 1.207053e-51 | -8.615850e-47 |
| Msa0653500 | Msa1281220 | -0.811072 | 8.405314e-51 | -8.615850e-47 |
| Msa0654560 | Msa1281220 | -0.823881 | 1.090673e-53 | -8.615850e-47 |
| Msa0657820 | Msa1281220 | -0.807544 | 4.799107e-50 | -8.615850e-47 |
| Msa0663540 | Msa1281220 | -0.810290 | 1.240370e-50 | -8.615850e-47 |
| Msa0663580 | Msa1281220 | -0.818496 | 1.901814e-52 | -8.615850e-47 |
| Msa0663690 | Msa1281220 | -0.811651 | 6.293938e-51 | -8.615850e-47 |
| Msa0690920 | Msa1281220 | -0.800542 | 1.372522e-48 | -8.615850e-47 |
| Msa0696600 | Msa1281220 | -0.803323 | 3.682202e-49 | -8.615850e-47 |
| Msa0703820 | Msa1281220 | -0.816602 | 5.081527e-52 | -8.615850e-47 |
| Msa0706130 | Msa1281220 | -0.824102 | 9.682487e-54 | -8.615850e-47 |
| Msa0707270 | Msa1281220 | -0.818870 | 1.564447e-52 | -8.615850e-47 |
| Msa0708380 | Msa1281220 | -0.810170 | 1.316993e-50 | -8.615850e-47 |
| Msa0708450 | Msa1281220 | -0.803938 | 2.745398e-49 | -8.615850e-47 |
| Msa0716430 | Msa1281220 | -0.827606 | 1.425577e-54 | -8.615850e-47 |
| Msa0716670 | Msa1281220 | -0.806891 | 6.598953e-50 | -8.615850e-47 |
| Msa0720850 | Msa1281220 | -0.812013 | 5.247559e-51 | -8.615850e-47 |
| Msa0721650 | Msa1281220 | -0.815602 | 8.500774e-52 | -8.615850e-47 |
| Msa0726000 | Msa1281220 | -0.801350 | 9.384747e-49 | -8.615850e-47 |
| Msa0749900 | Msa1281220 | -0.804908 | 1.723733e-49 | -8.615850e-47 |
| Msa0758000 | Msa1281220 | 0.810880 | 9.250325e-51 | -8.615850e-47 |
| Msa0762390 | Msa1281220 | -0.819365 | 1.206965e-52 | -8.615850e-47 |
| Msa0762470 | Msa1281220 | -0.803186 | 3.930748e-49 | -8.615850e-47 |
| Msa0766540 | Msa1281220 | -0.808805 | 2.586146e-50 | -8.615850e-47 |
| Msa0767040 | Msa1281220 | -0.808841 | 2.540722e-50 | -8.615850e-47 |
| Msa0772400 | Msa1281220 | -0.833973 | 3.919280e-56 | -8.615850e-47 |
| Msa0791700 | Msa1281220 | -0.805231 | 1.474955e-49 | -8.615850e-47 |
| Msa0803220 | Msa1281220 | -0.826291 | 2.941074e-54 | -8.615850e-47 |
| Msa0803930 | Msa1281220 | -0.812424 | 4.269393e-51 | -8.615850e-47 |
| Msa0807170 | Msa1281220 | -0.814372 | 1.592923e-51 | -8.615850e-47 |
| Msa0829110 | Msa1281220 | -0.801517 | 8.673914e-49 | -8.615850e-47 |
| Msa0831460 | Msa1281220 | -0.816225 | 6.169930e-52 | -8.615850e-47 |
| Msa0837590 | Msa1281220 | -0.815924 | 7.205540e-52 | -8.615850e-47 |
| Msa0838100 | Msa1281220 | -0.803297 | 3.728934e-49 | -8.615850e-47 |
| Msa0841570 | Msa1281220 | -0.802002 | 6.897468e-49 | -8.615850e-47 |
| Msa0121080 | Msa1281220 | -0.808613 | 2.842246e-50 | -8.615850e-47 |
| Msa0127060 | Msa1281220 | -0.802953 | 4.392503e-49 | -8.615850e-47 |
| Msa0127110 | Msa1281220 | -0.804351 | 2.252600e-49 | -8.615850e-47 |
| Msa0129270 | Msa1281220 | 0.817080 | 3.968977e-52 | -8.615850e-47 |
| Msa0136040 | Msa1281220 | -0.810421 | 1.162494e-50 | -8.615850e-47 |
| Msa0138800 | Msa1281220 | -0.800095 | 1.692340e-48 | -8.615850e-47 |
| Msa0168950 | Msa1281220 | -0.802832 | 4.651984e-49 | -8.615850e-47 |
| Msa0169320 | Msa1281220 | -0.815342 | 9.709418e-52 | -8.615850e-47 |
| Msa0170730 | Msa1281220 | -0.824354 | 8.445953e-54 | -8.615850e-47 |
| Msa0172820 | Msa1281220 | -0.805094 | 1.575760e-49 | -8.615850e-47 |
| Msa0186380 | Msa1281220 | -0.825045 | 5.805770e-54 | -8.615850e-47 |
| Msa0190400 | Msa1281220 | -0.839136 | 1.897774e-57 | -8.615850e-47 |
| Msa0192020 | Msa1281220 | -0.811622 | 6.383673e-51 | -8.615850e-47 |
| Msa0192710 | Msa1281220 | -0.830504 | 2.829671e-55 | -8.615850e-47 |
| Msa0207150 | Msa1281220 | -0.805109 | 1.564789e-49 | -8.615850e-47 |
| Msa0209590 | Msa1281220 | -0.814646 | 1.385623e-51 | -8.615850e-47 |
| Msa0218860 | Msa1281220 | -0.816281 | 5.996304e-52 | -8.615850e-47 |
| Msa0224980 | Msa1281220 | -0.806732 | 7.130009e-50 | -8.615850e-47 |
| Msa0225030 | Msa1281220 | -0.805024 | 1.629435e-49 | -8.615850e-47 |
| Msa0227970 | Msa1281220 | -0.809788 | 1.590961e-50 | -8.615850e-47 |
| Msa0237440 | Msa1281220 | -0.814314 | 1.641358e-51 | -8.615850e-47 |
| Msa1225240 | Msa1281220 | -0.814673 | 1.366456e-51 | -8.615850e-47 |
| Msa1225280 | Msa1281220 | -0.800707 | 1.270038e-48 | -8.615850e-47 |
| Msa1228600 | Msa1281220 | -0.817919 | 2.568596e-52 | -8.615850e-47 |
| Msa1229880 | Msa1281220 | -0.809910 | 1.498268e-50 | -8.615850e-47 |
| Msa1236090 | Msa1281220 | -0.820408 | 6.970175e-53 | -8.615850e-47 |
| Msa1239000 | Msa1281220 | -0.807011 | 6.224637e-50 | -8.615850e-47 |
| Msa1239870 | Msa1281220 | 0.898975 | 3.130077e-77 | -8.615850e-47 |
| Msa1251890 | Msa1281220 | -0.831940 | 1.255232e-55 | -8.615850e-47 |
| Msa1257860 | Msa1281220 | -0.810653 | 1.035613e-50 | -8.615850e-47 |
| Msa1258200 | Msa1281220 | -0.834059 | 3.731254e-56 | -8.615850e-47 |
| Msa1258770 | Msa1281220 | -0.803782 | 2.958233e-49 | -8.615850e-47 |
| Msa1263600 | Msa1281220 | -0.815259 | 1.013145e-51 | -8.615850e-47 |
| Msa1281220 | Msa1291140 | -0.802232 | 6.186644e-49 | -8.615850e-47 |
| Msa1281220 | Msa1297720 | -0.817970 | 2.501689e-52 | -8.615850e-47 |
| Msa1281220 | Msa1301610 | -0.808552 | 2.927715e-50 | -8.615850e-47 |
| Msa1281220 | Msa1302750 | -0.801464 | 8.893153e-49 | -8.615850e-47 |
| Msa1281220 | Msa1303040 | -0.810732 | 9.957926e-51 | -8.615850e-47 |
| Msa1281220 | Msa1310620 | -0.800624 | 1.320671e-48 | -8.615850e-47 |
| Msa1281220 | Msa1330280 | -0.809805 | 1.578160e-50 | -8.615850e-47 |
| Msa1281220 | Msa1331530 | -0.812569 | 3.969257e-51 | -8.615850e-47 |
| Msa1281220 | Msa1335500 | 0.808670 | 2.763779e-50 | -8.615850e-47 |
| Msa1281220 | Msa1336350 | -0.802721 | 4.904244e-49 | -8.615850e-47 |
| Msa1281220 | Msa1348630 | -0.821295 | 4.356883e-53 | -8.615850e-47 |
| Msa1281220 | Msa1349490 | -0.806503 | 7.968934e-50 | -8.615850e-47 |
| Msa1281220 | Msa1356500 | -0.808323 | 3.276458e-50 | -8.615850e-47 |
| Msa1281220 | Msa1356680 | -0.801319 | 9.522652e-49 | -8.615850e-47 |
| Msa1281220 | Msa1364420 | -0.808129 | 3.603448e-50 | -8.615850e-47 |
| Msa1281220 | Msa1366400 | -0.832857 | 7.438542e-56 | -8.615850e-47 |
| Msa1281220 | Msa1368150 | -0.811663 | 6.255945e-51 | -8.615850e-47 |
| Msa1281220 | Msa1368800 | -0.806100 | 9.689222e-50 | -8.615850e-47 |
| Msa1281220 | Msa1369220 | -0.803235 | 3.840268e-49 | -8.615850e-47 |
| Msa1281220 | Msa1371690 | -0.820729 | 5.879714e-53 | -8.615850e-47 |
| Msa1281220 | Msa1372570 | -0.807221 | 5.619406e-50 | -8.615850e-47 |
| Msa1281220 | Msa1373340 | -0.807890 | 4.051491e-50 | -8.615850e-47 |
| Msa1281220 | Msa1376230 | -0.814623 | 1.401956e-51 | -8.615850e-47 |
| Msa1281220 | Msa1376510 | -0.804216 | 2.402396e-49 | -8.615850e-47 |
| Msa1281220 | Msa1378840 | -0.812701 | 3.713422e-51 | -8.615850e-47 |
| Msa1281220 | Msa1379270 | -0.803414 | 3.525537e-49 | -8.615850e-47 |
| Msa1281220 | Msa1387100 | -0.803764 | 2.983311e-49 | -8.615850e-47 |
| Msa1281220 | Msa1393550 | -0.817098 | 3.933397e-52 | -8.615850e-47 |
| Msa1281220 | Msa1396310 | -0.856057 | 4.161598e-62 | -8.615850e-47 |
| Msa1281220 | Msa1412810 | -0.809403 | 1.925554e-50 | -8.615850e-47 |
| Msa1281220 | Msa1414280 | -0.804482 | 2.115370e-49 | -8.615850e-47 |
| Msa1281220 | Msa1425510 | -0.812772 | 3.583797e-51 | -8.615850e-47 |
| Msa1281220 | Msa1426310 | -0.819697 | 1.013535e-52 | -8.615850e-47 |
| Msa1281220 | Msa1426690 | -0.806964 | 6.368347e-50 | -8.615850e-47 |
| Msa1281220 | Msa1437650 | -0.808842 | 2.539217e-50 | -8.615850e-47 |
| Msa1281220 | Msa1444070 | -0.823044 | 1.711867e-53 | -8.615850e-47 |
| Msa1281220 | Msa1449510 | -0.809166 | 2.164080e-50 | -8.615850e-47 |
| Msa1281220 | Msa1459590 | -0.804307 | 2.300448e-49 | -8.615850e-47 |
| Msa1281220 | Msa1463500 | -0.804393 | 2.207189e-49 | -8.615850e-47 |
| Msa1281220 | Msa1465950 | -0.802257 | 6.113649e-49 | -8.615850e-47 |
| Msa0365350 | Msa1281220 | -0.826344 | 2.856942e-54 | -8.615850e-47 |
| Msa0366120 | Msa1281220 | -0.800930 | 1.144083e-48 | -8.615850e-47 |
| Msa0367600 | Msa1281220 | -0.800068 | 1.714434e-48 | -8.615850e-47 |
| Msa0378530 | Msa1281220 | -0.805398 | 1.361213e-49 | -8.615850e-47 |
| Msa0383110 | Msa1281220 | -0.807059 | 6.081921e-50 | -8.615850e-47 |
| Msa0384570 | Msa1281220 | -0.845848 | 3.144700e-59 | -8.615850e-47 |
| Msa0385870 | Msa1281220 | -0.826983 | 2.010173e-54 | -8.615850e-47 |
| Msa0386390 | Msa1281220 | -0.800823 | 1.202844e-48 | -8.615850e-47 |
| Msa0398850 | Msa1281220 | -0.806743 | 7.090963e-50 | -8.615850e-47 |
| Msa0422230 | Msa1281220 | -0.804716 | 1.889991e-49 | -8.615850e-47 |
| Msa0438440 | Msa1281220 | -0.800098 | 1.690346e-48 | -8.615850e-47 |
| Msa0439120 | Msa1281220 | -0.801428 | 9.046855e-49 | -8.615850e-47 |
| Msa0440220 | Msa1281220 | -0.803753 | 2.999249e-49 | -8.615850e-47 |
| Msa0452740 | Msa1281220 | -0.811905 | 5.540736e-51 | -8.615850e-47 |
| Msa0457380 | Msa1281220 | -0.800980 | 1.117302e-48 | -8.615850e-47 |
| Msa0471130 | Msa1281220 | -0.802838 | 4.640411e-49 | -8.615850e-47 |
| Msa0474220 | Msa1281220 | -0.823655 | 1.232550e-53 | -8.615850e-47 |
| Msa0475080 | Msa1281220 | -0.817680 | 2.908890e-52 | -8.615850e-47 |
| Msa0476820 | Msa1281220 | -0.801109 | 1.051376e-48 | -8.615850e-47 |
| Msa0985570 | Msa1281220 | -0.805381 | 1.371938e-49 | -8.615850e-47 |
| Msa1011060 | Msa1281220 | -0.834449 | 2.978000e-56 | -8.615850e-47 |
| Msa1031620 | Msa1281220 | -0.806193 | 9.264217e-50 | -8.615850e-47 |
| Msa1031650 | Msa1281220 | -0.810215 | 1.287808e-50 | -8.615850e-47 |
| Msa1033460 | Msa1281220 | -0.807934 | 3.965612e-50 | -8.615850e-47 |
| Msa1038040 | Msa1281220 | -0.806510 | 7.944318e-50 | -8.615850e-47 |
| Msa1052600 | Msa1281220 | -0.819533 | 1.104775e-52 | -8.615850e-47 |
| Msa1056790 | Msa1281220 | -0.801884 | 7.294825e-49 | -8.615850e-47 |
| Msa1068290 | Msa1281220 | -0.805002 | 1.647098e-49 | -8.615850e-47 |
| Msa1074630 | Msa1281220 | -0.806838 | 6.770602e-50 | -8.615850e-47 |
| Msa1078600 | Msa1281220 | -0.802136 | 6.474994e-49 | -8.615850e-47 |
| Msa1082760 | Msa1281220 | -0.801806 | 7.567528e-49 | -8.615850e-47 |
| Msa1091450 | Msa1281220 | -0.801850 | 7.411521e-49 | -8.615850e-47 |
| Msa1092430 | Msa1281220 | -0.812270 | 4.612873e-51 | -8.615850e-47 |
| Msa1106830 | Msa1281220 | -0.807209 | 5.651598e-50 | -8.615850e-47 |
| Msa0246470 | Msa1281220 | -0.806229 | 9.102167e-50 | -8.615850e-47 |
| Msa0249670 | Msa1281220 | -0.819603 | 1.064951e-52 | -8.615850e-47 |
| Msa0265440 | Msa1281220 | -0.809603 | 1.743834e-50 | -8.615850e-47 |
| Msa0266120 | Msa1281220 | -0.813367 | 2.653098e-51 | -8.615850e-47 |
| Msa0267130 | Msa1281220 | -0.835843 | 1.325169e-56 | -8.615850e-47 |
| Msa0269430 | Msa1281220 | -0.810668 | 1.027851e-50 | -8.615850e-47 |
| Msa0285510 | Msa1281220 | -0.803287 | 3.746125e-49 | -8.615850e-47 |
| Msa0297860 | Msa1281220 | -0.806670 | 7.348569e-50 | -8.615850e-47 |
| Msa0302020 | Msa1281220 | -0.811635 | 6.342799e-51 | -8.615850e-47 |
| Msa0309490 | Msa1281220 | -0.805670 | 1.193094e-49 | -8.615850e-47 |
| Msa0311130 | Msa1281220 | -0.829845 | 4.097642e-55 | -8.615850e-47 |
| Msa0323790 | Msa1281220 | -0.801498 | 8.750720e-49 | -8.615850e-47 |
| Msa0341710 | Msa1281220 | -0.812180 | 4.827076e-51 | -8.615850e-47 |
| Msa0343230 | Msa1281220 | -0.802433 | 5.624036e-49 | -8.615850e-47 |
| Msa1118870 | Msa1281220 | -0.812124 | 4.963371e-51 | -8.615850e-47 |
| Msa1118890 | Msa1281220 | -0.801191 | 1.011425e-48 | -8.615850e-47 |
| Msa1126910 | Msa1281220 | -0.813161 | 2.945060e-51 | -8.615850e-47 |
| Msa1126980 | Msa1281220 | -0.853670 | 2.049624e-61 | -8.615850e-47 |
| Msa1143060 | Msa1281220 | -0.806090 | 9.737368e-50 | -8.615850e-47 |
| Msa1150250 | Msa1281220 | -0.818345 | 2.057811e-52 | -8.615850e-47 |
| Msa1154130 | Msa1281220 | -0.805375 | 1.376205e-49 | -8.615850e-47 |
| Msa1158540 | Msa1281220 | -0.803015 | 4.264039e-49 | -8.615850e-47 |
| Msa1160470 | Msa1281220 | -0.802307 | 5.970206e-49 | -8.615850e-47 |
| Msa1166020 | Msa1281220 | -0.857960 | 1.143247e-62 | -8.615850e-47 |
| Msa1184640 | Msa1281220 | -0.806685 | 7.293988e-50 | -8.615850e-47 |
| Msa1185030 | Msa1281220 | -0.811622 | 6.386445e-51 | -8.615850e-47 |
| Msa1197210 | Msa1281220 | -0.815074 | 1.113972e-51 | -8.615850e-47 |
| Msa1199690 | Msa1281220 | -0.807898 | 4.035816e-50 | -8.615850e-47 |
| Msa1205520 | Msa1281220 | -0.820299 | 7.383076e-53 | -8.615850e-47 |
| Msa1205560 | Msa1281220 | -0.813149 | 2.962701e-51 | -8.615850e-47 |
| Msa1207770 | Msa1281220 | -0.809677 | 1.681096e-50 | -8.615850e-47 |
| Msa1207780 | Msa1281220 | -0.808779 | 2.618718e-50 | -8.615850e-47 |
| Msa1209650 | Msa1281220 | -0.801659 | 8.110215e-49 | -8.615850e-47 |
| Msa1223050 | Msa1281220 | -0.809782 | 1.595860e-50 | -8.615850e-47 |
| Msa1223520 | Msa1281220 | -0.801881 | 7.303521e-49 | -8.615850e-47 |
| Msa1223600 | Msa1281220 | -0.812277 | 4.597159e-51 | -8.615850e-47 |
| Msa0495510 | Msa1281220 | -0.813881 | 2.044615e-51 | -8.615850e-47 |
| Msa0499950 | Msa1281220 | -0.801268 | 9.754437e-49 | -8.615850e-47 |
| Msa0501920 | Msa1281220 | -0.806018 | 1.008289e-49 | -8.615850e-47 |
| Msa0504640 | Msa1281220 | -0.802471 | 5.522027e-49 | -8.615850e-47 |
| Msa0511930 | Msa1281220 | -0.800358 | 1.496142e-48 | -8.615850e-47 |
| Msa0513660 | Msa1281220 | -0.814311 | 1.643744e-51 | -8.615850e-47 |
| Msa0518720 | Msa1281220 | -0.801895 | 7.255480e-49 | -8.615850e-47 |
| Msa0522510 | Msa1281220 | -0.832861 | 7.422480e-56 | -8.615850e-47 |
| Msa0522810 | Msa1281220 | -0.824629 | 7.278221e-54 | -8.615850e-47 |
| Msa0522870 | Msa1281220 | -0.803259 | 3.797013e-49 | -8.615850e-47 |
| Msa0523400 | Msa1281220 | -0.814160 | 1.775068e-51 | -8.615850e-47 |
| Msa0524570 | Msa1281220 | -0.808165 | 3.541985e-50 | -8.615850e-47 |
| Msa0533140 | Msa1281220 | -0.813336 | 2.695205e-51 | -8.615850e-47 |
| Msa0539400 | Msa1281220 | -0.803533 | 3.331531e-49 | -8.615850e-47 |
| Msa0548230 | Msa1281220 | -0.807331 | 5.326103e-50 | -8.615850e-47 |
| Msa0557770 | Msa1281220 | -0.806192 | 9.267575e-50 | -8.615850e-47 |
| Msa0558160 | Msa1281220 | -0.817658 | 2.942457e-52 | -8.615850e-47 |
| Msa0559280 | Msa1281220 | -0.849773 | 2.607759e-60 | -8.615850e-47 |
| Msa0559890 | Msa1281220 | -0.813547 | 2.421564e-51 | -8.615850e-47 |
| Msa0562680 | Msa1281220 | -0.825065 | 5.743386e-54 | -8.615850e-47 |
| Msa0562740 | Msa1281220 | -0.809416 | 1.912774e-50 | -8.615850e-47 |
| Msa0565530 | Msa1281220 | -0.806088 | 9.749170e-50 | -8.615850e-47 |
| Msa0565930 | Msa1281220 | -0.823750 | 1.170781e-53 | -8.615850e-47 |
| Msa0567190 | Msa1281220 | -0.802522 | 5.390551e-49 | -8.615850e-47 |
| Msa0567490 | Msa1281220 | -0.805150 | 1.534155e-49 | -8.615850e-47 |
| Msa0568300 | Msa1281220 | -0.803465 | 3.441632e-49 | -8.615850e-47 |
| Msa0569930 | Msa1281220 | -0.809822 | 1.564767e-50 | -8.615850e-47 |
| Msa0573970 | Msa1281220 | -0.808088 | 3.677974e-50 | -8.615850e-47 |
| Msa0576640 | Msa1281220 | -0.819007 | 1.455539e-52 | -8.615850e-47 |
| Msa0581190 | Msa1281220 | -0.863392 | 2.572919e-64 | -8.615850e-47 |
| Msa0581490 | Msa1281220 | -0.824009 | 1.018265e-53 | -8.615850e-47 |
| Msa0585720 | Msa1281220 | -0.818930 | 1.515437e-52 | -8.615850e-47 |
| Msa0846180 | Msa1281220 | -0.823634 | 1.246416e-53 | -8.615850e-47 |
| Msa0880170 | Msa1281220 | -0.809648 | 1.705684e-50 | -8.615850e-47 |
| Msa0888900 | Msa1281220 | -0.804653 | 1.948611e-49 | -8.615850e-47 |
| Msa0932040 | Msa1281220 | -0.802231 | 6.188748e-49 | -8.615850e-47 |
| Msa0938190 | Msa1281220 | -0.822677 | 2.084005e-53 | -8.615850e-47 |
| Msa0968450 | Msa1281220 | -0.800675 | 1.289203e-48 | -8.615850e-47 |
| Msa0970160 | Msa1281220 | -0.808138 | 3.587910e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281220 | MtrunA17_Chr8g0351761 | 94.722 | 360 | 16 | 1 | 1 | 360 | 1 | 357 | 0.0 | 612 |
| Msa1281220 | MtrunA17_Chr7g0245841 | 69.697 | 363 | 78 | 10 | 1 | 360 | 1 | 334 | 3.96e-153 | 434 |
| Msa1281220 | MtrunA17_Chr4g0056761 | 49.575 | 353 | 128 | 6 | 17 | 358 | 17 | 330 | 7.26e-78 | 242 |
| Msa1281220 | MtrunA17_Chr1g0188211 | 43.417 | 357 | 141 | 10 | 1 | 342 | 1 | 311 | 5.10e-67 | 214 |
| Msa1281220 | MtrunA17_Chr5g0398621 | 44.487 | 263 | 103 | 5 | 15 | 272 | 4 | 228 | 2.21e-58 | 189 |
| Msa1281220 | MtrunA17_Chr1g0179461 | 41.250 | 320 | 141 | 11 | 69 | 359 | 64 | 365 | 1.06e-57 | 191 |
| Msa1281220 | MtrunA17_Chr5g0397551 | 43.295 | 261 | 127 | 6 | 72 | 327 | 68 | 312 | 8.29e-53 | 177 |
| Msa1281220 | MtrunA17_Chr6g0476061 | 50.000 | 224 | 87 | 8 | 64 | 272 | 43 | 256 | 4.81e-52 | 175 |
| Msa1281220 | MtrunA17_Chr8g0386741 | 47.761 | 201 | 101 | 3 | 73 | 273 | 96 | 292 | 5.40e-50 | 171 |
| Msa1281220 | MtrunA17_Chr8g0349091 | 52.083 | 192 | 86 | 2 | 74 | 265 | 89 | 274 | 9.85e-49 | 167 |
| Msa1281220 | MtrunA17_Chr4g0054661 | 49.741 | 193 | 85 | 6 | 74 | 262 | 73 | 257 | 1.10e-47 | 164 |
| Msa1281220 | MtrunA17_Chr7g0247431 | 45.327 | 214 | 107 | 3 | 72 | 282 | 87 | 293 | 2.72e-43 | 153 |
| Msa1281220 | MtrunA17_Chr1g0190011 | 34.667 | 300 | 145 | 11 | 74 | 353 | 43 | 311 | 1.99e-33 | 126 |
| Msa1281220 | MtrunA17_Chr4g0027331 | 53.435 | 131 | 58 | 3 | 127 | 255 | 2 | 131 | 3.21e-33 | 120 |
| Msa1281220 | MtrunA17_Chr4g0027371 | 47.518 | 141 | 72 | 2 | 134 | 272 | 8 | 148 | 8.34e-33 | 122 |
| Msa1281220 | MtrunA17_Chr4g0027351 | 56.757 | 111 | 44 | 2 | 147 | 256 | 21 | 128 | 1.60e-32 | 118 |
| Msa1281220 | MtrunA17_Chr7g0274821 | 35.034 | 294 | 157 | 9 | 73 | 353 | 73 | 345 | 9.22e-32 | 122 |
| Msa1281220 | MtrunA17_Chr1g0165101 | 36.653 | 251 | 124 | 9 | 71 | 303 | 82 | 315 | 9.28e-28 | 111 |
| Msa1281220 | MtrunA17_Chr4g0027301 | 45.522 | 134 | 68 | 3 | 125 | 256 | 9 | 139 | 3.59e-25 | 99.4 |
| Msa1281220 | MtrunA17_Chr6g0476241 | 39.806 | 206 | 104 | 8 | 74 | 279 | 120 | 305 | 6.25e-25 | 102 |
| Msa1281220 | MtrunA17_Chr5g0417581 | 40.288 | 139 | 64 | 4 | 139 | 261 | 13 | 148 | 1.17e-22 | 94.4 |
| Msa1281220 | MtrunA17_Chr3g0112131 | 41.803 | 122 | 67 | 1 | 148 | 269 | 109 | 226 | 3.13e-20 | 90.1 |
| Msa1281220 | MtrunA17_Chr3g0133051 | 39.837 | 123 | 71 | 3 | 147 | 267 | 103 | 224 | 1.90e-19 | 87.4 |
| Msa1281220 | MtrunA17_Chr5g0427311 | 38.636 | 132 | 75 | 4 | 139 | 267 | 74 | 202 | 3.00e-19 | 85.9 |
| Msa1281220 | MtrunA17_Chr4g0054651 | 43.443 | 122 | 65 | 1 | 148 | 269 | 106 | 223 | 4.00e-18 | 83.6 |
| Msa1281220 | MtrunA17_Chr1g0168121 | 41.803 | 122 | 67 | 1 | 148 | 269 | 72 | 189 | 1.14e-17 | 82.0 |
| Msa1281220 | MtrunA17_Chr7g0250031 | 41.860 | 129 | 71 | 1 | 148 | 276 | 87 | 211 | 2.13e-17 | 81.3 |
| Msa1281220 | MtrunA17_Chr5g0443311 | 34.158 | 202 | 84 | 5 | 62 | 262 | 38 | 191 | 2.28e-17 | 80.9 |
| Msa1281220 | MtrunA17_Chr3g0086021 | 42.857 | 112 | 57 | 3 | 157 | 265 | 118 | 225 | 6.35e-17 | 80.5 |
| Msa1281220 | MtrunA17_Chr5g0398531 | 40.984 | 122 | 68 | 1 | 148 | 269 | 130 | 247 | 2.76e-16 | 79.0 |
| Msa1281220 | MtrunA17_Chr5g0400531 | 39.850 | 133 | 63 | 5 | 75 | 200 | 121 | 243 | 1.10e-15 | 75.9 |
| Msa1281220 | MtrunA17_Chr8g0351651 | 42.623 | 122 | 66 | 1 | 148 | 269 | 116 | 233 | 1.17e-15 | 76.6 |
| Msa1281220 | MtrunA17_Chr1g0190051 | 39.344 | 122 | 70 | 1 | 148 | 269 | 104 | 221 | 9.22e-15 | 73.9 |
| Msa1281220 | MtrunA17_Chr5g0435681 | 40.496 | 121 | 68 | 1 | 149 | 269 | 120 | 236 | 2.18e-14 | 73.2 |
| Msa1281220 | MtrunA17_Chr5g0398591 | 34.513 | 113 | 64 | 2 | 197 | 309 | 11 | 113 | 4.54e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281220 | AT4G12080.1 | 55.705 | 298 | 114 | 7 | 11 | 292 | 22 | 317 | 7.58e-91 | 276 |
| Msa1281220 | AT4G22770.2 | 55.036 | 278 | 104 | 7 | 6 | 274 | 13 | 278 | 5.58e-75 | 235 |
| Msa1281220 | AT4G22770.1 | 55.036 | 278 | 104 | 7 | 6 | 274 | 13 | 278 | 5.58e-75 | 235 |
| Msa1281220 | AT4G00200.2 | 47.297 | 370 | 129 | 13 | 1 | 358 | 1 | 316 | 3.57e-68 | 217 |
| Msa1281220 | AT4G00200.1 | 47.297 | 370 | 129 | 13 | 1 | 358 | 1 | 316 | 3.57e-68 | 217 |
| Msa1281220 | AT4G25320.1 | 58.049 | 205 | 74 | 5 | 73 | 267 | 85 | 287 | 1.19e-67 | 218 |
| Msa1281220 | AT2G33620.1 | 49.213 | 254 | 111 | 7 | 66 | 310 | 85 | 329 | 9.92e-64 | 207 |
| Msa1281220 | AT2G33620.4 | 49.213 | 254 | 111 | 7 | 66 | 310 | 85 | 329 | 9.92e-64 | 207 |
| Msa1281220 | AT2G33620.2 | 49.213 | 254 | 111 | 7 | 66 | 310 | 85 | 329 | 9.92e-64 | 207 |
| Msa1281220 | AT2G33620.3 | 49.213 | 254 | 111 | 7 | 66 | 310 | 85 | 329 | 9.92e-64 | 207 |
| Msa1281220 | AT5G62260.1 | 55.603 | 232 | 83 | 9 | 59 | 275 | 62 | 288 | 1.40e-63 | 208 |
| Msa1281220 | AT5G62260.3 | 55.603 | 232 | 83 | 9 | 59 | 275 | 62 | 288 | 1.40e-63 | 208 |
| Msa1281220 | AT5G62260.2 | 52.609 | 230 | 90 | 8 | 59 | 273 | 62 | 287 | 1.85e-60 | 196 |
| Msa1281220 | AT5G51590.1 | 52.273 | 220 | 73 | 4 | 73 | 262 | 77 | 294 | 4.37e-58 | 194 |
| Msa1281220 | AT2G45850.1 | 42.105 | 285 | 127 | 7 | 73 | 355 | 97 | 345 | 1.48e-51 | 175 |
| Msa1281220 | AT2G45850.2 | 42.105 | 285 | 127 | 7 | 73 | 355 | 97 | 345 | 1.48e-51 | 175 |
| Msa1281220 | AT1G63470.1 | 51.309 | 191 | 90 | 3 | 73 | 262 | 104 | 292 | 1.47e-50 | 173 |
| Msa1281220 | AT3G61310.1 | 51.415 | 212 | 87 | 6 | 70 | 277 | 97 | 296 | 2.63e-48 | 167 |
| Msa1281220 | AT2G45850.3 | 51.852 | 189 | 83 | 2 | 73 | 261 | 97 | 277 | 1.94e-47 | 162 |
| Msa1281220 | AT4G17950.1 | 42.308 | 234 | 85 | 7 | 73 | 271 | 130 | 348 | 7.48e-45 | 160 |
| Msa1281220 | AT1G63480.5 | 47.368 | 190 | 88 | 4 | 73 | 262 | 92 | 269 | 1.06e-42 | 152 |
| Msa1281220 | AT1G63480.7 | 47.368 | 190 | 88 | 4 | 73 | 262 | 92 | 269 | 1.06e-42 | 152 |
| Msa1281220 | AT1G63480.4 | 47.368 | 190 | 88 | 4 | 73 | 262 | 92 | 269 | 1.06e-42 | 152 |
| Msa1281220 | AT1G63480.3 | 47.368 | 190 | 88 | 4 | 73 | 262 | 92 | 269 | 1.06e-42 | 152 |
| Msa1281220 | AT1G63480.6 | 47.368 | 190 | 88 | 4 | 73 | 262 | 92 | 269 | 1.06e-42 | 152 |
| Msa1281220 | AT1G63480.2 | 47.368 | 190 | 88 | 4 | 73 | 262 | 98 | 275 | 1.14e-42 | 152 |
| Msa1281220 | AT1G63480.1 | 47.368 | 190 | 88 | 4 | 73 | 262 | 98 | 275 | 1.14e-42 | 152 |
| Msa1281220 | AT5G46640.1 | 44.978 | 229 | 97 | 8 | 64 | 275 | 87 | 303 | 3.13e-41 | 149 |
| Msa1281220 | AT3G04590.1 | 41.053 | 190 | 101 | 5 | 73 | 261 | 104 | 283 | 6.55e-35 | 130 |
| Msa1281220 | AT3G04590.2 | 41.053 | 190 | 101 | 5 | 73 | 261 | 104 | 283 | 1.07e-33 | 129 |
| Msa1281220 | AT2G36560.1 | 38.922 | 167 | 99 | 2 | 134 | 297 | 94 | 260 | 7.11e-27 | 112 |
| Msa1281220 | AT3G60870.1 | 40.171 | 117 | 64 | 2 | 145 | 261 | 86 | 196 | 1.16e-18 | 85.1 |
| Msa1281220 | AT5G49700.1 | 37.600 | 125 | 74 | 3 | 147 | 267 | 85 | 209 | 4.47e-18 | 83.6 |
| Msa1281220 | AT2G42940.1 | 41.129 | 124 | 69 | 1 | 139 | 262 | 74 | 193 | 1.96e-17 | 81.6 |
| Msa1281220 | AT3G55560.1 | 40.984 | 122 | 69 | 1 | 148 | 269 | 118 | 236 | 7.64e-17 | 80.5 |
| Msa1281220 | AT1G14490.2 | 31.868 | 182 | 94 | 5 | 147 | 319 | 51 | 211 | 2.61e-16 | 77.8 |
| Msa1281220 | AT1G14490.1 | 31.868 | 182 | 94 | 5 | 147 | 319 | 32 | 192 | 2.83e-16 | 77.0 |
| Msa1281220 | AT5G28590.1 | 38.333 | 120 | 49 | 2 | 142 | 261 | 27 | 121 | 6.15e-16 | 76.3 |
| Msa1281220 | AT2G35270.1 | 40.984 | 122 | 68 | 1 | 148 | 269 | 108 | 225 | 1.24e-15 | 76.6 |
| Msa1281220 | AT4G14465.1 | 41.228 | 114 | 63 | 1 | 148 | 261 | 97 | 206 | 1.33e-15 | 76.6 |
| Msa1281220 | AT4G17800.1 | 40.984 | 122 | 68 | 1 | 148 | 269 | 112 | 229 | 2.43e-15 | 75.9 |
| Msa1281220 | AT4G22810.1 | 41.600 | 125 | 66 | 2 | 148 | 269 | 135 | 255 | 6.46e-14 | 72.4 |
| Msa1281220 | AT4G12050.1 | 41.463 | 123 | 67 | 2 | 148 | 269 | 148 | 266 | 1.26e-13 | 71.6 |
| Msa1281220 | AT1G76500.1 | 33.333 | 123 | 69 | 2 | 148 | 261 | 102 | 220 | 2.16e-13 | 70.5 |
| Msa1281220 | AT3G04570.1 | 36.154 | 130 | 71 | 2 | 148 | 269 | 110 | 235 | 8.83e-13 | 68.9 |
| Msa1281220 | AT4G35390.1 | 41.379 | 116 | 62 | 2 | 148 | 261 | 93 | 204 | 2.08e-12 | 67.4 |
| Msa1281220 | AT2G45430.1 | 40.476 | 126 | 67 | 2 | 148 | 269 | 119 | 240 | 3.44e-12 | 67.0 |
Find 140 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCGTCATCCAGATTCTTC+TGG | 0.185964 | 8_3:+20648389 | Msa1281220:CDS |
| TATTTACTTACGATTGAATT+TGG | 0.188768 | 8_3:+20650886 | Msa1281220:three_prime_UTR |
| GCTGCAGCTGTGGCTACTTC+AGG | 0.227842 | 8_3:-20646465 | None:intergenic |
| TTTATCAGCACTATTAGTTT+GGG | 0.229264 | 8_3:-20650409 | None:intergenic |
| CTTTATCAGCACTATTAGTT+TGG | 0.232275 | 8_3:-20650410 | None:intergenic |
| GTAGAGCATCTTTGATTTAT+CGG | 0.274166 | 8_3:+20650777 | Msa1281220:three_prime_UTR |
| AGAAGTGAAATTTGAGTTAA+GGG | 0.292527 | 8_3:-20650478 | None:intergenic |
| AGGGGTAGACCAAGGAAATA+TGG | 0.299572 | 8_3:+20646585 | Msa1281220:CDS |
| CCGCCTTTCGAAGGGAAAAC+TGG | 0.306082 | 8_3:+20650511 | Msa1281220:CDS |
| CTGCCCTGCTTCTTGTTCCT+TGG | 0.322269 | 8_3:-20649558 | None:intergenic |
| TGATACGCGGATGGAGCTTC+TGG | 0.325691 | 8_3:-20646402 | None:intergenic |
| AAATTCAATCGTAAGTAAAT+AGG | 0.329573 | 8_3:-20650884 | None:intergenic |
| GGACATGTACTGCAAAATTC+TGG | 0.336452 | 8_3:+20650453 | Msa1281220:CDS |
| CGATAATCAACTTAATTATC+AGG | 0.338753 | 8_3:-20650594 | None:intergenic |
| TTTGTAGGATATTACAAATA+AGG | 0.345980 | 8_3:+20648292 | Msa1281220:intron |
| TTTGAGATACTTTCCTTGTC+TGG | 0.346259 | 8_3:+20649511 | Msa1281220:CDS |
| GAGAAGTGAAATTTGAGTTA+AGG | 0.349352 | 8_3:-20650479 | None:intergenic |
| TCCGTCATCCAGATTCTTCT+GGG | 0.353528 | 8_3:+20648390 | Msa1281220:CDS |
| GTAGTAGGCGGTGGAGTTGC+TGG | 0.359916 | 8_3:+20649619 | Msa1281220:CDS |
| TTTCAGATTTAGAAGAAGAT+TGG | 0.377395 | 8_3:+20645241 | Msa1281220:intron |
| CAGATACCAGAGAACAGATT+TGG | 0.377430 | 8_3:-20650705 | None:intergenic |
| TGGTTTATTTCAGGTGGTGG+TGG | 0.379225 | 8_3:+20650275 | Msa1281220:intron |
| TCAGGGTTATGAACCTGGTT+TGG | 0.383570 | 8_3:-20646447 | None:intergenic |
| TGGTTTGGAACTTCATTCCT+TGG | 0.406728 | 8_3:-20646432 | None:intergenic |
| ATTGTTCCAAATCTGTTCTC+TGG | 0.408818 | 8_3:+20650699 | Msa1281220:three_prime_UTR |
| CTACTTCAGGGTTATGAACC+TGG | 0.411417 | 8_3:-20646452 | None:intergenic |
| CTGCAGCTGTGGCTACTTCA+GGG | 0.413234 | 8_3:-20646464 | None:intergenic |
| GTAGCCACAGCTGCAGCCGC+AGG | 0.416742 | 8_3:+20646471 | Msa1281220:CDS |
| CCATCTGGCCCATATTTCCT+TGG | 0.419968 | 8_3:-20646594 | None:intergenic |
| AGGTATCAATCCTGCGGTTA+CGG | 0.429267 | 8_3:+20646371 | Msa1281220:CDS |
| GTATCAGCAGCAGGAGCAGC+AGG | 0.430433 | 8_3:-20646510 | None:intergenic |
| TTCCCCGGTGAGTGTAGGTT+TGG | 0.435635 | 8_3:+20646542 | Msa1281220:CDS |
| ATATGTGTCTTATCGGCTAC+TGG | 0.439406 | 8_3:+20648347 | Msa1281220:CDS |
| TCCTCCTGCGGCTGCAGCTG+TGG | 0.444728 | 8_3:-20646475 | None:intergenic |
| GCGAGCAATATGTGTCTTAT+CGG | 0.444838 | 8_3:+20648340 | Msa1281220:CDS |
| GTTTGATAATATATACTTGA+GGG | 0.454467 | 8_3:+20646314 | Msa1281220:five_prime_UTR |
| CTTCGAAAGGCGGTGGGTGG+AGG | 0.455584 | 8_3:-20650501 | None:intergenic |
| GCACTATTAGTTTGGGGTGG+CGG | 0.460992 | 8_3:-20650402 | None:intergenic |
| AACTAATAGTGCTGATAAAG+AGG | 0.463078 | 8_3:+20650413 | Msa1281220:CDS |
| AGCATCTTTGATTTATCGGC+TGG | 0.466562 | 8_3:+20650781 | Msa1281220:three_prime_UTR |
| GGTTTATTTCAGGTGGTGGT+GGG | 0.467575 | 8_3:+20650276 | Msa1281220:intron |
| GGCGGAGCTGAAGATGAAAT+AGG | 0.469098 | 8_3:-20646645 | None:intergenic |
| CTCCACCCACCGCCTTTCGA+AGG | 0.470896 | 8_3:+20650502 | Msa1281220:CDS |
| TATCTGTTACTATAGTCTAT+AGG | 0.475294 | 8_3:+20650722 | Msa1281220:three_prime_UTR |
| GATTTATCGGCTGGTTACTT+AGG | 0.475425 | 8_3:+20650790 | Msa1281220:three_prime_UTR |
| GATTTACTGACGCACCTCAT+AGG | 0.475961 | 8_3:-20648423 | None:intergenic |
| ATGGAACCGTTAAGAAGAAA+AGG | 0.482189 | 8_3:+20646565 | Msa1281220:CDS |
| GAGGATGCCATGGGTGGCGG+TGG | 0.489674 | 8_3:+20650432 | Msa1281220:CDS |
| GTCTCACTGGCAAGCCCTGA+TGG | 0.493252 | 8_3:+20649592 | Msa1281220:CDS |
| AGCCCTGATGGTCGCGTAGT+AGG | 0.496107 | 8_3:+20649604 | Msa1281220:CDS |
| TATAGCTGCCACTCCTGTGC+AGG | 0.498450 | 8_3:+20649648 | Msa1281220:CDS |
| CTATTAGTTTGGGGTGGCGG+AGG | 0.501818 | 8_3:-20650399 | None:intergenic |
| TCTCAGTTGTAAATGTTGTC+AGG | 0.502735 | 8_3:-20650634 | None:intergenic |
| GCAAGTGAAACCACAGGGGA+TGG | 0.503140 | 8_3:+20646695 | Msa1281220:CDS |
| CATTTCATCACTGTCAATGC+CGG | 0.503879 | 8_3:+20648147 | Msa1281220:CDS |
| CCGGTGAGTGTAGGTTTGGA+TGG | 0.506054 | 8_3:+20646546 | Msa1281220:CDS |
| AAATTTGTGATGGATCATCT+AGG | 0.506878 | 8_3:+20646735 | Msa1281220:CDS |
| AATGGAATATTATGATAAGT+AGG | 0.507027 | 8_3:+20650825 | Msa1281220:three_prime_UTR |
| CGCCTTTCGAAGGGAAAACT+GGG | 0.507842 | 8_3:+20650512 | Msa1281220:CDS |
| CCAAGGAAATATGGGCCAGA+TGG | 0.510350 | 8_3:+20646594 | Msa1281220:CDS |
| TTATCAGCACTATTAGTTTG+GGG | 0.514408 | 8_3:-20650408 | None:intergenic |
| AAGTGTGGAATCACAGTGAC+AGG | 0.517609 | 8_3:+20645266 | Msa1281220:five_prime_UTR |
| GGGGTAGACCAAGGAAATAT+GGG | 0.519638 | 8_3:+20646586 | Msa1281220:CDS |
| GATGAGAAGTCTTTAGAAGA+AGG | 0.519933 | 8_3:-20646666 | None:intergenic |
| GGTGTTTCCCCGGTGAGTGT+AGG | 0.524269 | 8_3:+20646537 | Msa1281220:CDS |
| TGATACTGTCGGTGTTTCCC+CGG | 0.528819 | 8_3:+20646527 | Msa1281220:CDS |
| GGCATGTTGACAGACCCATC+TGG | 0.529102 | 8_3:-20646609 | None:intergenic |
| CCATCCAAACCTACACTCAC+CGG | 0.530701 | 8_3:-20646546 | None:intergenic |
| GAAAGGATGTTTACCTGCAC+AGG | 0.532950 | 8_3:-20649661 | None:intergenic |
| CAAGGAAATATGGGCCAGAT+GGG | 0.533009 | 8_3:+20646595 | Msa1281220:CDS |
| AGGTGGAATGAGTGTCTCAC+TGG | 0.534737 | 8_3:+20649579 | Msa1281220:CDS |
| GTTCCTTGGTTAGTATCAGT+AGG | 0.535654 | 8_3:-20649544 | None:intergenic |
| TGGAACCGTTAAGAAGAAAA+GGG | 0.536900 | 8_3:+20646566 | Msa1281220:CDS |
| GGCGCTATCACCGTAACCGC+AGG | 0.538939 | 8_3:-20646381 | None:intergenic |
| CAAGGAACAAGAAGCAGGGC+AGG | 0.539556 | 8_3:+20649559 | Msa1281220:CDS |
| AGAAGAAGATTGGTGAAGTG+TGG | 0.539931 | 8_3:+20645251 | Msa1281220:five_prime_UTR |
| CATCCAAACCTACACTCACC+GGG | 0.541795 | 8_3:-20646545 | None:intergenic |
| CAGTGTTGTTAGTTGCAGCT+AGG | 0.543039 | 8_3:+20650755 | Msa1281220:three_prime_UTR |
| GATGGTCGCGTAGTAGGCGG+TGG | 0.544887 | 8_3:+20649610 | Msa1281220:CDS |
| GCCACAGCTGCAGCCGCAGG+AGG | 0.547008 | 8_3:+20646474 | Msa1281220:CDS |
| TCCACCCACCGCCTTTCGAA+GGG | 0.550500 | 8_3:+20650503 | Msa1281220:CDS |
| AAAGAGGATGCCATGGGTGG+CGG | 0.553112 | 8_3:+20650429 | Msa1281220:CDS |
| CGTAAGTAAATAGGCAAACA+AGG | 0.557038 | 8_3:-20650875 | None:intergenic |
| GGTCAACATGCACTCTATGC+CGG | 0.563460 | 8_3:+20650533 | Msa1281220:CDS |
| CTAACCAAGGAACAAGAAGC+AGG | 0.565981 | 8_3:+20649554 | Msa1281220:CDS |
| TGCACCAGCCACATTTACTC+AGG | 0.575550 | 8_3:+20650356 | Msa1281220:CDS |
| AGGTGCTGCAGATACTGCAA+TGG | 0.578343 | 8_3:-20650379 | None:intergenic |
| TGCTGATAAAGAGGATGCCA+TGG | 0.579066 | 8_3:+20650422 | Msa1281220:CDS |
| GAAATAGGCAATGGTGACAA+TGG | 0.584349 | 8_3:-20646630 | None:intergenic |
| ACACCGACAGTATCAGCAGC+AGG | 0.584936 | 8_3:-20646519 | None:intergenic |
| TACATGTCCACCGCCACCCA+TGG | 0.588243 | 8_3:-20650439 | None:intergenic |
| ATGGCCTGAGTAAATGTGGC+TGG | 0.592651 | 8_3:-20650360 | None:intergenic |
| GTGAACATTCAATATATGCA+TGG | 0.593809 | 8_3:+20646338 | Msa1281220:exon |
| TTCAGATCTTGATGGCCGCT+AGG | 0.596191 | 8_3:-20650309 | None:intergenic |
| TGTGAAGCAAGTGAAACCAC+AGG | 0.599772 | 8_3:+20646689 | Msa1281220:CDS |
| ATATGCATGGAAGGAAGAGA+AGG | 0.600541 | 8_3:+20646351 | Msa1281220:exon |
| GCTCCTGCTGCTGATACTGT+CGG | 0.601485 | 8_3:+20646516 | Msa1281220:CDS |
| TGCATTCAAACATACCTCGC+CGG | 0.603353 | 8_3:-20648166 | None:intergenic |
| ACATTCAATATATGCATGGA+AGG | 0.604410 | 8_3:+20646342 | Msa1281220:exon |
| CCTGATGGTCGCGTAGTAGG+CGG | 0.607126 | 8_3:+20649607 | Msa1281220:CDS |
| GATGTTTACCTGCACAGGAG+TGG | 0.611223 | 8_3:-20649656 | None:intergenic |
| CTCTTGTATTCCATCCCCTG+TGG | 0.611712 | 8_3:-20646705 | None:intergenic |
| GCCATCAAGATCTGAAAACA+AGG | 0.613990 | 8_3:+20650316 | Msa1281220:CDS |
| GGAACAAGAAGCAGGGCAGG+TGG | 0.614997 | 8_3:+20649562 | Msa1281220:CDS |
| CCGTCATCCAGATTCTTCTG+GGG | 0.615042 | 8_3:+20648391 | Msa1281220:CDS |
| TCAGCACTATTAGTTTGGGG+TGG | 0.617347 | 8_3:-20650405 | None:intergenic |
| CGTCATCCAGATTCTTCTGG+GGG | 0.617667 | 8_3:+20648392 | Msa1281220:CDS |
| TGCAATGGCCTGAGTAAATG+TGG | 0.618756 | 8_3:-20650364 | None:intergenic |
| CACAGGGGATGGAATACAAG+AGG | 0.618940 | 8_3:+20646706 | Msa1281220:CDS |
| GGTTTGATAATATATACTTG+AGG | 0.619187 | 8_3:+20646313 | Msa1281220:five_prime_UTR |
| GAAATGAATGGGCACTCTGA+TGG | 0.621101 | 8_3:+20648108 | Msa1281220:CDS |
| CCCCAGAAGAATCTGGATGA+CGG | 0.622155 | 8_3:-20648391 | None:intergenic |
| CTTAGGTAGATGCAGCACAA+TGG | 0.630850 | 8_3:+20650807 | Msa1281220:three_prime_UTR |
| GCTGGTGCATAATCAGACTT+AGG | 0.632613 | 8_3:-20650342 | None:intergenic |
| CCTTGGTGCGACATGATACG+CGG | 0.636660 | 8_3:-20646415 | None:intergenic |
| GCTGAAGATGAAATAGGCAA+TGG | 0.637503 | 8_3:-20646639 | None:intergenic |
| CGCCTACTACGCGACCATCA+GGG | 0.640739 | 8_3:-20649606 | None:intergenic |
| GAGAAGTCTTTAGAAGAAGG+CGG | 0.641757 | 8_3:-20646663 | None:intergenic |
| AGAAGAAAAGGGGTAGACCA+AGG | 0.648040 | 8_3:+20646577 | Msa1281220:CDS |
| AAGGAATGAAGTTCCAAACC+AGG | 0.649098 | 8_3:+20646434 | Msa1281220:CDS |
| GGTGCGACATGATACGCGGA+TGG | 0.661584 | 8_3:-20646411 | None:intergenic |
| TAACCAAGGAACAAGAAGCA+GGG | 0.661712 | 8_3:+20649555 | Msa1281220:CDS |
| GTGAAGCAAGTGAAACCACA+GGG | 0.662135 | 8_3:+20646690 | Msa1281220:CDS |
| GCATTGACAGTGATGAAATG+CGG | 0.670620 | 8_3:-20648144 | None:intergenic |
| GATAAGACACATATTGCTCG+CGG | 0.677068 | 8_3:-20648338 | None:intergenic |
| CATCACTGTCAATGCCGGCG+AGG | 0.679492 | 8_3:+20648152 | Msa1281220:CDS |
| ACAGGGGATGGAATACAAGA+GGG | 0.685377 | 8_3:+20646707 | Msa1281220:CDS |
| AAATAGGCAAACAAGGACCA+AGG | 0.686050 | 8_3:-20650868 | None:intergenic |
| GTGGGAAGCTTTCTGCCTAG+CGG | 0.688039 | 8_3:+20650294 | Msa1281220:CDS |
| GGAACCGTTAAGAAGAAAAG+GGG | 0.688506 | 8_3:+20646567 | Msa1281220:CDS |
| TATGCCGGACACAAGAAAAG+CGG | 0.691783 | 8_3:+20650548 | Msa1281220:CDS |
| ATGCCTACTGATACTAACCA+AGG | 0.692561 | 8_3:+20649541 | Msa1281220:CDS |
| AGGCATGAATGATCCAGACA+AGG | 0.701025 | 8_3:-20649524 | None:intergenic |
| TAAGATAACAATAGAGAACA+CGG | 0.703524 | 8_3:-20650675 | None:intergenic |
| AGCAGCAGTAGATCCTCCTG+CGG | 0.704949 | 8_3:-20646487 | None:intergenic |
| AAGAGAAGGTATCAATCCTG+CGG | 0.707222 | 8_3:+20646365 | Msa1281220:CDS |
| GCTGATAAAGAGGATGCCAT+GGG | 0.708603 | 8_3:+20650423 | Msa1281220:CDS |
| GATAAAGAGGATGCCATGGG+TGG | 0.714274 | 8_3:+20650426 | Msa1281220:CDS |
| ATCCAAACCTACACTCACCG+GGG | 0.724447 | 8_3:-20646544 | None:intergenic |
| TGAAGCAAGTGAAACCACAG+GGG | 0.784596 | 8_3:+20646691 | Msa1281220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTATTTCATTTTC+TGG | + | chr8_3:20645136-20645155 | Msa1281220:intron | 10.0% |
| !!! | AAATAAAAAATCAATTTTGA+TGG | + | chr8_3:20645762-20645781 | Msa1281220:intron | 10.0% |
| !! | AATATTATTCATTATAACTT+TGG | - | chr8_3:20648253-20648272 | None:intergenic | 10.0% |
| !!! | TTTTGATTTTAAAGTCTTAA+TGG | + | chr8_3:20645651-20645670 | Msa1281220:intron | 15.0% |
| !! | TCAAGTTTAATTAATTCTTA+CGG | + | chr8_3:20647310-20647329 | Msa1281220:intron | 15.0% |
| !!! | AATTCAGAAATATTTTTTGT+TGG | + | chr8_3:20648072-20648091 | Msa1281220:intron | 15.0% |
| !!! | GATTGATAATATTTATAATC+AGG | + | chr8_3:20648573-20648592 | Msa1281220:intron | 15.0% |
| !! | ATGAAAAAAAAGAACAACTA+TGG | - | chr8_3:20645838-20645857 | None:intergenic | 20.0% |
| !! | AAAACAATCAGAAAGAAAAT+GGG | - | chr8_3:20646269-20646288 | None:intergenic | 20.0% |
| !! | TAAAACAATCAGAAAGAAAA+TGG | - | chr8_3:20646270-20646289 | None:intergenic | 20.0% |
| !!! | GTTTGATAATATATACTTGA+GGG | + | chr8_3:20646314-20646333 | Msa1281220:five_prime_UTR | 20.0% |
| !! | AGCATTAAATCAATGTATAA+AGG | - | chr8_3:20646772-20646791 | None:intergenic | 20.0% |
| !! | TACACAACTTGTATTTATAA+TGG | - | chr8_3:20647146-20647165 | None:intergenic | 20.0% |
| !! | AATTAATTAATTCCGCTATT+GGG | + | chr8_3:20647267-20647286 | Msa1281220:intron | 20.0% |
| !! | TAAGTAAATTCTATGTATCA+AGG | + | chr8_3:20647408-20647427 | Msa1281220:intron | 20.0% |
| !! | TTCTTTACAAATTACAATGA+GGG | - | chr8_3:20647587-20647606 | None:intergenic | 20.0% |
| !! | ATTCTTTACAAATTACAATG+AGG | - | chr8_3:20647588-20647607 | None:intergenic | 20.0% |
| !! | ATTTGTAAAGAATTACAATG+AGG | + | chr8_3:20647617-20647636 | Msa1281220:intron | 20.0% |
| !! | TTTGTAAAGAATTACAATGA+GGG | + | chr8_3:20647618-20647637 | Msa1281220:intron | 20.0% |
| !! | ACTGAAATTAATATAAGCAA+AGG | + | chr8_3:20647669-20647688 | Msa1281220:intron | 20.0% |
| !!! | CTTTTGTTTATAAACAGTAA+CGG | + | chr8_3:20647721-20647740 | Msa1281220:intron | 20.0% |
| !!! | TACACAACTTGTTTTTATAA+TGG | - | chr8_3:20647779-20647798 | None:intergenic | 20.0% |
| !! | ACTGAAATTAATATAAGCAA+CGG | + | chr8_3:20647669-20647688 | Msa1281220:intron | 20.0% |
| !! | TAAGTAAATTCTATGTATCA+AGG | - | chr8_3:20647408-20647427 | None:intergenic | 20.0% |
| !! | TTTGTAGGATATTACAAATA+AGG | + | chr8_3:20648292-20648311 | Msa1281220:intron | 20.0% |
| !!! | GTTTTTTGTTTATATGAGAA+TGG | + | chr8_3:20648624-20648643 | Msa1281220:intron | 20.0% |
| !!! | ATTTTGTAAATTAAGCAAGA+TGG | + | chr8_3:20648711-20648730 | Msa1281220:intron | 20.0% |
| !! | TCCAAAACATAATCAAATAT+CGG | + | chr8_3:20649248-20649267 | Msa1281220:intron | 20.0% |
| !! | ATATTAAACAGAAGATATTG+TGG | - | chr8_3:20649459-20649478 | None:intergenic | 20.0% |
| !!! | TATTTTTCTTGGTTTATTTC+AGG | + | chr8_3:20650266-20650285 | Msa1281220:intron | 20.0% |
| !! | AATGGAATATTATGATAAGT+AGG | + | chr8_3:20650825-20650844 | Msa1281220:three_prime_UTR | 20.0% |
| !! | AAATTCAATCGTAAGTAAAT+AGG | - | chr8_3:20650887-20650906 | None:intergenic | 20.0% |
| !! | TATTTACTTACGATTGAATT+TGG | + | chr8_3:20650886-20650905 | Msa1281220:three_prime_UTR | 20.0% |
| !!! | AAAAAAAACTGTTGAGTTGA+TGG | - | chr8_3:20645039-20645058 | None:intergenic | 25.0% |
| ! | TTATTTGTTCTGCAATTCAA+AGG | - | chr8_3:20645087-20645106 | None:intergenic | 25.0% |
| ! | TTTCAGATTTAGAAGAAGAT+TGG | + | chr8_3:20645241-20645260 | Msa1281220:intron | 25.0% |
| !!! | CTTTATGTCTTTTAAAGTTC+TGG | + | chr8_3:20645412-20645431 | Msa1281220:intron | 25.0% |
| !!! | TTCTGTTTTTGAATAGCTTT+TGG | + | chr8_3:20645467-20645486 | Msa1281220:intron | 25.0% |
| !!! | ACCAAATATTTTTACTCAAG+TGG | + | chr8_3:20645583-20645602 | Msa1281220:intron | 25.0% |
| !!! | CCAAATATTTTTACTCAAGT+GGG | + | chr8_3:20645584-20645603 | Msa1281220:intron | 25.0% |
| ! | AAACAATCAGAAAGAAAATG+GGG | - | chr8_3:20646268-20646287 | None:intergenic | 25.0% |
| !!! | CTGATTGTTTTATACTTTCT+TGG | + | chr8_3:20646278-20646297 | Msa1281220:intron | 25.0% |
| ! | TTTATACTTTCTTGGATTGT+AGG | + | chr8_3:20646286-20646305 | Msa1281220:intron | 25.0% |
| !! | GGTTTGATAATATATACTTG+AGG | + | chr8_3:20646313-20646332 | Msa1281220:five_prime_UTR | 25.0% |
| ! | AAACATCAACAAAAGGAAAA+AGG | - | chr8_3:20646849-20646868 | None:intergenic | 25.0% |
| ! | GTTGTACAATTAAAGGAATA+TGG | - | chr8_3:20647036-20647055 | None:intergenic | 25.0% |
| ! | CTATGAAGTTGTACAATTAA+AGG | - | chr8_3:20647043-20647062 | None:intergenic | 25.0% |
| ! | GAATTAATTAATTCCGCTAT+TGG | + | chr8_3:20647266-20647285 | Msa1281220:intron | 25.0% |
| ! | AAGGCAACTTGTATTTATAA+TGG | + | chr8_3:20647427-20647446 | Msa1281220:intron | 25.0% |
| ! | ATACCTTAATAAGTGTGAAA+TGG | - | chr8_3:20647511-20647530 | None:intergenic | 25.0% |
| ! | GCTGAAATTAATATAAGCAA+CGG | - | chr8_3:20647535-20647554 | None:intergenic | 25.0% |
| !!! | AATTACAATGAGGGTATTAT+GGG | - | chr8_3:20647578-20647597 | None:intergenic | 25.0% |
| !!! | AAATTACAATGAGGGTATTA+TGG | - | chr8_3:20647579-20647598 | None:intergenic | 25.0% |
| !!! | AAATTACAATGAGGGTATTT+TGG | + | chr8_3:20647834-20647853 | Msa1281220:intron | 25.0% |
| !!! | AATTACAATGAGGGTATTTT+GGG | + | chr8_3:20647835-20647854 | Msa1281220:intron | 25.0% |
| ! | AAGGCAACTTGTATTTATAA+TGG | - | chr8_3:20647427-20647446 | None:intergenic | 25.0% |
| !! | CATTATAACTTTGGAAGTAA+TGG | - | chr8_3:20648244-20648263 | None:intergenic | 25.0% |
| !! | TATTATCTTGCTATACTCTT+TGG | + | chr8_3:20648269-20648288 | Msa1281220:intron | 25.0% |
| !! | TGATATCATTTTCACAACAA+GGG | + | chr8_3:20648315-20648334 | Msa1281220:CDS | 25.0% |
| !! | GTTCTGTTTTATGTAAAGTA+TGG | + | chr8_3:20648519-20648538 | Msa1281220:intron | 25.0% |
| ! | TTATGTAAAGTATGGATCTA+AGG | + | chr8_3:20648527-20648546 | Msa1281220:intron | 25.0% |
| !! | TTAGGTATTGCAATAATCAT+CGG | + | chr8_3:20648551-20648570 | Msa1281220:intron | 25.0% |
| ! | GTTCAGTAAATTAATCAAGA+TGG | + | chr8_3:20648665-20648684 | Msa1281220:intron | 25.0% |
| !! | TTTTCAAAATAGGGTCAATT+TGG | - | chr8_3:20648931-20648950 | None:intergenic | 25.0% |
| !! | TCAAAGAGGTTTTCAAAATA+GGG | - | chr8_3:20648940-20648959 | None:intergenic | 25.0% |
| !!! | TATTTTGAAAACCTCTTTGA+GGG | + | chr8_3:20648940-20648959 | Msa1281220:intron | 25.0% |
| !!! | TCCTGTTTTCTTTTGTTTTA+TGG | + | chr8_3:20649059-20649078 | Msa1281220:intron | 25.0% |
| ! | ACCATAAAACAAAAGAAAAC+AGG | - | chr8_3:20649063-20649082 | None:intergenic | 25.0% |
| !!! | TTCCTCTGTTTTTTGTTTTT+TGG | + | chr8_3:20649111-20649130 | Msa1281220:intron | 25.0% |
| !! | ACCGATATTTGATTATGTTT+TGG | - | chr8_3:20649252-20649271 | None:intergenic | 25.0% |
| !! | GAATGTTGATGTATTGATAT+TGG | + | chr8_3:20649431-20649450 | Msa1281220:intron | 25.0% |
| ! | TTGTTTGGCAACTATATTAA+GGG | - | chr8_3:20649764-20649783 | None:intergenic | 25.0% |
| ! | TTTGTTTGGCAACTATATTA+AGG | - | chr8_3:20649765-20649784 | None:intergenic | 25.0% |
| ! | AATATAGTTGCCAAACAAAT+AGG | + | chr8_3:20649766-20649785 | Msa1281220:intron | 25.0% |
| ! | AATTCTCAATCCTATTTGTT+TGG | - | chr8_3:20649779-20649798 | None:intergenic | 25.0% |
| ! | AAACAGTGAAATATTTGGAA+AGG | - | chr8_3:20649892-20649911 | None:intergenic | 25.0% |
| ! | ATAGGAAACAGTGAAATATT+TGG | - | chr8_3:20649897-20649916 | None:intergenic | 25.0% |
| ! | CTGTTTACAAAGATTTGTAT+AGG | - | chr8_3:20649915-20649934 | None:intergenic | 25.0% |
| ! | TTAAATTCAATCACATGTGT+TGG | + | chr8_3:20650173-20650192 | Msa1281220:intron | 25.0% |
| !! | AGGATCACTTATATTTTTCT+TGG | + | chr8_3:20650255-20650274 | Msa1281220:intron | 25.0% |
| !! | TTTATCAGCACTATTAGTTT+GGG | - | chr8_3:20650412-20650431 | None:intergenic | 25.0% |
| !! | AGAAGTGAAATTTGAGTTAA+GGG | - | chr8_3:20650481-20650500 | None:intergenic | 25.0% |
| ! | CGATAATCAACTTAATTATC+AGG | - | chr8_3:20650597-20650616 | None:intergenic | 25.0% |
| ! | TAAGATAACAATAGAGAACA+CGG | - | chr8_3:20650678-20650697 | None:intergenic | 25.0% |
| ! | TATCTGTTACTATAGTCTAT+AGG | + | chr8_3:20650722-20650741 | Msa1281220:three_prime_UTR | 25.0% |
| !!! | TGAGTTGATGGTTTTTGTAA+AGG | - | chr8_3:20645027-20645046 | None:intergenic | 30.0% |
| !! | TTATTTCATTTTCTGGTGTG+AGG | + | chr8_3:20645143-20645162 | Msa1281220:intron | 30.0% |
| !! | TATTTCATTTTCTGGTGTGA+GGG | + | chr8_3:20645144-20645163 | Msa1281220:intron | 30.0% |
| AGACATAAAGCTGAAACTAA+CGG | - | chr8_3:20645402-20645421 | None:intergenic | 30.0% | |
| !! | TTTAAAGTTCTGGAAAATGC+TGG | + | chr8_3:20645422-20645441 | Msa1281220:intron | 30.0% |
| !! | TTAAAGTTCTGGAAAATGCT+GGG | + | chr8_3:20645423-20645442 | Msa1281220:intron | 30.0% |
| CCCACTTGAGTAAAAATATT+TGG | - | chr8_3:20645587-20645606 | None:intergenic | 30.0% | |
| !!! | GTGTATCTTTTTTCATCTTC+TGG | + | chr8_3:20645685-20645704 | Msa1281220:intron | 30.0% |
| !!! | TTTTTTCATCTTCTGGTATG+TGG | + | chr8_3:20645692-20645711 | Msa1281220:intron | 30.0% |
| AGAACAACTATGGTTCAAAT+TGG | - | chr8_3:20645828-20645847 | None:intergenic | 30.0% | |
| ! | CTTTTATTACATGCTCAACA+AGG | + | chr8_3:20645966-20645985 | Msa1281220:intron | 30.0% |
| ! | ATGCCTTCAATTTAAAGTGT+CGG | - | chr8_3:20646066-20646085 | None:intergenic | 30.0% |
| ! | CTTTAAATTGAAGGCATGTT+TGG | + | chr8_3:20646069-20646088 | Msa1281220:intron | 30.0% |
| AACAATCAGAAAGAAAATGG+GGG | - | chr8_3:20646267-20646286 | None:intergenic | 30.0% | |
| GTGAACATTCAATATATGCA+TGG | + | chr8_3:20646338-20646357 | Msa1281220:exon | 30.0% | |
| ACATTCAATATATGCATGGA+AGG | + | chr8_3:20646342-20646361 | Msa1281220:exon | 30.0% | |
| !! | AAATTTGTGATGGATCATCT+AGG | + | chr8_3:20646735-20646754 | Msa1281220:CDS | 30.0% |
| !! | CATTGATTTAATGCTCTTGT+TGG | + | chr8_3:20646777-20646796 | Msa1281220:intron | 30.0% |
| ACACTTCAAACATCAACAAA+AGG | - | chr8_3:20646856-20646875 | None:intergenic | 30.0% | |
| AACCTAGAAAGTTGTAAACT+CGG | - | chr8_3:20647084-20647103 | None:intergenic | 30.0% | |
| ! | TGCTTTTAAACAGTAACAGA+GGG | - | chr8_3:20647481-20647500 | None:intergenic | 30.0% |
| !! | TTGCTTTTAAACAGTAACAG+AGG | - | chr8_3:20647482-20647501 | None:intergenic | 30.0% |
| TCACCATTTCACACTTATTA+AGG | + | chr8_3:20647505-20647524 | Msa1281220:intron | 30.0% | |
| TTGTTTATAAACAGTAACGG+AGG | + | chr8_3:20647724-20647743 | Msa1281220:intron | 30.0% | |
| ! | TGTTTATAAACAGTAACGGA+GGG | + | chr8_3:20647725-20647744 | Msa1281220:intron | 30.0% |
| ACATTTCGCAAATTACAATG+AGG | + | chr8_3:20647825-20647844 | Msa1281220:intron | 30.0% | |
| CATTTCGCAAATTACAATGA+GGG | + | chr8_3:20647826-20647845 | Msa1281220:intron | 30.0% | |
| ATACCTTAACAAGTGTGAAA+TGG | + | chr8_3:20647902-20647921 | Msa1281220:intron | 30.0% | |
| !! | CTTTTGCTTTTAAACAGTAG+CGG | + | chr8_3:20647928-20647947 | Msa1281220:intron | 30.0% |
| !!! | TTTTTTGTTGGTACTTTTGC+AGG | + | chr8_3:20648084-20648103 | Msa1281220:intron | 30.0% |
| AATTTGTATAACGCTTAGGA+AGG | - | chr8_3:20648214-20648233 | None:intergenic | 30.0% | |
| CATCAATTTGTATAACGCTT+AGG | - | chr8_3:20648218-20648237 | None:intergenic | 30.0% | |
| ! | GTGATATCATTTTCACAACA+AGG | + | chr8_3:20648314-20648333 | Msa1281220:CDS | 30.0% |
| !! | ATGAATTTAGGCTTTAAGCA+TGG | - | chr8_3:20648476-20648495 | None:intergenic | 30.0% |
| CAGAAGCTTCAAATGAATTT+AGG | - | chr8_3:20648488-20648507 | None:intergenic | 30.0% | |
| ! | AAAGTATGGATCTAAGGTTT+AGG | + | chr8_3:20648533-20648552 | Msa1281220:intron | 30.0% |
| TTCTACTAATGTATTGAGTC+AGG | + | chr8_3:20648758-20648777 | Msa1281220:intron | 30.0% | |
| ATATGTTCAGTAGTCAATAG+TGG | + | chr8_3:20648810-20648829 | Msa1281220:intron | 30.0% | |
| !! | AGCTGCTATTTGATTTTAGT+AGG | + | chr8_3:20648899-20648918 | Msa1281220:intron | 30.0% |
| ! | CTCAAAGAGGTTTTCAAAAT+AGG | - | chr8_3:20648941-20648960 | None:intergenic | 30.0% |
| !! | CTATTTTGAAAACCTCTTTG+AGG | + | chr8_3:20648939-20648958 | Msa1281220:intron | 30.0% |
| !!! | TTTTTTCTTCCTCTGTTGTA+TGG | + | chr8_3:20649016-20649035 | Msa1281220:intron | 30.0% |
| CACCAAAAAACAAAAAACAG+AGG | - | chr8_3:20649116-20649135 | None:intergenic | 30.0% | |
| AACATAATAGTAGTCAATCC+CGG | - | chr8_3:20649299-20649318 | None:intergenic | 30.0% | |
| AAATGACTTTCACAAAAGTC+TGG | + | chr8_3:20649333-20649352 | Msa1281220:intron | 30.0% | |
| TGTTTGGCAACTATATTAAG+GGG | - | chr8_3:20649763-20649782 | None:intergenic | 30.0% | |
| GACATAGAATTGCAAGTTTA+GGG | - | chr8_3:20650024-20650043 | None:intergenic | 30.0% | |
| AGACATAGAATTGCAAGTTT+AGG | - | chr8_3:20650025-20650044 | None:intergenic | 30.0% | |
| GTATAGGAATCATGTTAACT+TGG | - | chr8_3:20650085-20650104 | None:intergenic | 30.0% | |
| ! | TATAAGTGATCCTTCTTTTG+AGG | - | chr8_3:20650248-20650267 | None:intergenic | 30.0% |
| ! | TTTTCTTGGTTTATTTCAGG+TGG | + | chr8_3:20650269-20650288 | Msa1281220:intron | 30.0% |
| ! | TTATCAGCACTATTAGTTTG+GGG | - | chr8_3:20650411-20650430 | None:intergenic | 30.0% |
| CTTTATCAGCACTATTAGTT+TGG | - | chr8_3:20650413-20650432 | None:intergenic | 30.0% | |
| !! | AACTAATAGTGCTGATAAAG+AGG | + | chr8_3:20650413-20650432 | Msa1281220:CDS | 30.0% |
| ! | GAGAAGTGAAATTTGAGTTA+AGG | - | chr8_3:20650482-20650501 | None:intergenic | 30.0% |
| ! | GTAGAGCATCTTTGATTTAT+CGG | + | chr8_3:20650777-20650796 | Msa1281220:three_prime_UTR | 30.0% |
| !! | GTAGGCTAATTTTGATGTAA+TGG | + | chr8_3:20650843-20650862 | Msa1281220:three_prime_UTR | 30.0% |
| !! | ATTTTGATGTAATGGTACCT+TGG | + | chr8_3:20650851-20650870 | Msa1281220:three_prime_UTR | 30.0% |
| ATCAAAGGATCACACAAATG+AGG | - | chr8_3:20645932-20645951 | None:intergenic | 35.0% | |
| CATTTGTGTGATCCTTTGAT+TGG | + | chr8_3:20645932-20645951 | Msa1281220:intron | 35.0% | |
| GCAGACTAAAAACCAATCAA+AGG | - | chr8_3:20645947-20645966 | None:intergenic | 35.0% | |
| ! | TCAACAAGGTTTGACTTTGA+AGG | + | chr8_3:20645980-20645999 | Msa1281220:intron | 35.0% |
| TCACCGACACTTTAAATTGA+AGG | + | chr8_3:20646060-20646079 | Msa1281220:intron | 35.0% | |
| GTCGAACATCTAACATATGT+CGG | - | chr8_3:20646150-20646169 | None:intergenic | 35.0% | |
| ATGGAACCGTTAAGAAGAAA+AGG | + | chr8_3:20646565-20646584 | Msa1281220:CDS | 35.0% | |
| TGGAACCGTTAAGAAGAAAA+GGG | + | chr8_3:20646566-20646585 | Msa1281220:CDS | 35.0% | |
| ! | TCTACCCCTTTTCTTCTTAA+CGG | - | chr8_3:20646574-20646593 | None:intergenic | 35.0% |
| ! | GATGAGAAGTCTTTAGAAGA+AGG | - | chr8_3:20646669-20646688 | None:intergenic | 35.0% |
| TGGATCATCTAGGTAATTGT+TGG | + | chr8_3:20646745-20646764 | Msa1281220:intron | 35.0% | |
| GATTTAATGCTCTTGTTGGT+TGG | + | chr8_3:20646781-20646800 | Msa1281220:intron | 35.0% | |
| TGGATTGAAGGAAAGTAGTT+CGG | - | chr8_3:20646945-20646964 | None:intergenic | 35.0% | |
| !! | CAAATTTGAGAGCTTTGTTG+TGG | - | chr8_3:20646965-20646984 | None:intergenic | 35.0% |
| ACCTAGAAAGTTGTAAACTC+GGG | - | chr8_3:20647083-20647102 | None:intergenic | 35.0% | |
| TTTCGCGCTTATTAAGGTAT+CGG | - | chr8_3:20647695-20647714 | None:intergenic | 35.0% | |
| ATACCTTAATAAGCGCGAAA+TGG | + | chr8_3:20647695-20647714 | Msa1281220:intron | 35.0% | |
| ! | TCACCATTTCACACTTGTTA+AGG | - | chr8_3:20647908-20647927 | None:intergenic | 35.0% |
| ! | ACTTTTGCAGGTGAAATGAA+TGG | + | chr8_3:20648096-20648115 | Msa1281220:intron | 35.0% |
| ! | CTTTTGCAGGTGAAATGAAT+GGG | + | chr8_3:20648097-20648116 | Msa1281220:intron | 35.0% |
| AGGAAGGTAAGAATAAAGGA+CGG | - | chr8_3:20648198-20648217 | None:intergenic | 35.0% | |
| GCTTAGGAAGGTAAGAATAA+AGG | - | chr8_3:20648202-20648221 | None:intergenic | 35.0% | |
| !! | TGCTATACTCTTTGGTTTGT+AGG | + | chr8_3:20648277-20648296 | Msa1281220:intron | 35.0% |
| TAAACCCTAACATTGCTTGA+TGG | + | chr8_3:20648979-20648998 | Msa1281220:intron | 35.0% | |
| GAAACCATCAAGCAATGTTA+GGG | - | chr8_3:20648986-20649005 | None:intergenic | 35.0% | |
| AGAAACCATCAAGCAATGTT+AGG | - | chr8_3:20648987-20649006 | None:intergenic | 35.0% | |
| TCAAATATCAGCTCAGACTA+TGG | - | chr8_3:20649364-20649383 | None:intergenic | 35.0% | |
| TAGTCTGAGCTGATATTTGA+TGG | + | chr8_3:20649364-20649383 | Msa1281220:intron | 35.0% | |
| TCTTCTAAATATGCTCTTGC+AGG | + | chr8_3:20649483-20649502 | Msa1281220:intron | 35.0% | |
| CTTCTAAATATGCTCTTGCA+GGG | + | chr8_3:20649484-20649503 | Msa1281220:intron | 35.0% | |
| ! | TTTGAGATACTTTCCTTGTC+TGG | + | chr8_3:20649511-20649530 | Msa1281220:CDS | 35.0% |
| ATCCTTTCACTCTTTACACT+TGG | + | chr8_3:20649676-20649695 | Msa1281220:intron | 35.0% | |
| TCCTTTCACTCTTTACACTT+GGG | + | chr8_3:20649677-20649696 | Msa1281220:intron | 35.0% | |
| ACTATATTAAGGGGAAATGG+TGG | - | chr8_3:20649754-20649773 | None:intergenic | 35.0% | |
| GCAACTATATTAAGGGGAAA+TGG | - | chr8_3:20649757-20649776 | None:intergenic | 35.0% | |
| !! | GAGATCGTTTTTGTGTAAGT+AGG | + | chr8_3:20650059-20650078 | Msa1281220:intron | 35.0% |
| TACAGTGTTCATGTTTGTGT+CGG | - | chr8_3:20650112-20650131 | None:intergenic | 35.0% | |
| ACAAACATGAACACTGTACA+TGG | + | chr8_3:20650114-20650133 | Msa1281220:intron | 35.0% | |
| GATGCAACACTTAAGATTGA+AGG | - | chr8_3:20650223-20650242 | None:intergenic | 35.0% | |
| !!! | TCCTTGTTTTCAGATCTTGA+TGG | - | chr8_3:20650320-20650339 | None:intergenic | 35.0% |
| TCTCAGTTGTAAATGTTGTC+AGG | - | chr8_3:20650637-20650656 | None:intergenic | 35.0% | |
| ATTGTTCCAAATCTGTTCTC+TGG | + | chr8_3:20650699-20650718 | Msa1281220:three_prime_UTR | 35.0% | |
| CGTAAGTAAATAGGCAAACA+AGG | - | chr8_3:20650878-20650897 | None:intergenic | 35.0% | |
| GAACTGAACTAGTTGAGTTC+TGG | + | chr8_3:20645166-20645185 | Msa1281220:intron | 40.0% | |
| AGAAGAAGATTGGTGAAGTG+TGG | + | chr8_3:20645251-20645270 | Msa1281220:five_prime_UTR | 40.0% | |
| GCTTCTGTCTGAGAAATATC+TGG | + | chr8_3:20645519-20645538 | Msa1281220:intron | 40.0% | |
| GATCACACAAATGAGGAAGA+AGG | - | chr8_3:20645925-20645944 | None:intergenic | 40.0% | |
| AAACGCAATCACATGTGTCA+CGG | - | chr8_3:20646172-20646191 | None:intergenic | 40.0% | |
| CTTTCTTGGATTGTAGGTGT+TGG | + | chr8_3:20646292-20646311 | Msa1281220:intron | 40.0% | |
| ATATGCATGGAAGGAAGAGA+AGG | + | chr8_3:20646351-20646370 | Msa1281220:exon | 40.0% | |
| !! | AAGAGAAGGTATCAATCCTG+CGG | + | chr8_3:20646365-20646384 | Msa1281220:CDS | 40.0% |
| ! | TGGTTTGGAACTTCATTCCT+TGG | - | chr8_3:20646435-20646454 | None:intergenic | 40.0% |
| AAGGAATGAAGTTCCAAACC+AGG | + | chr8_3:20646434-20646453 | Msa1281220:CDS | 40.0% | |
| GGAACCGTTAAGAAGAAAAG+GGG | + | chr8_3:20646567-20646586 | Msa1281220:CDS | 40.0% | |
| GAAATAGGCAATGGTGACAA+TGG | - | chr8_3:20646633-20646652 | None:intergenic | 40.0% | |
| GCTGAAGATGAAATAGGCAA+TGG | - | chr8_3:20646642-20646661 | None:intergenic | 40.0% | |
| ! | GAGAAGTCTTTAGAAGAAGG+CGG | - | chr8_3:20646666-20646685 | None:intergenic | 40.0% |
| GAGGGCGAAAAAATTTGTGA+TGG | + | chr8_3:20646725-20646744 | Msa1281220:CDS | 40.0% | |
| ! | GTTTGAAGTGTATCTCTGTC+TGG | + | chr8_3:20646865-20646884 | Msa1281220:intron | 40.0% |
| !! | AGAGCTTTGTTGTGGATTGA+AGG | - | chr8_3:20646957-20646976 | None:intergenic | 40.0% |
| CCTAGAAAGTTGTAAACTCG+GGG | - | chr8_3:20647082-20647101 | None:intergenic | 40.0% | |
| ! | GACATCTTTTGACCCAATAG+CGG | - | chr8_3:20647282-20647301 | None:intergenic | 40.0% |
| GAATTACAATGAGGGTAGTG+TGG | + | chr8_3:20647626-20647645 | Msa1281220:intron | 40.0% | |
| TCACCATTTCGCGCTTATTA+AGG | - | chr8_3:20647701-20647720 | None:intergenic | 40.0% | |
| !! | TTGCTTTTAAACAGTAGCGG+AGG | + | chr8_3:20647931-20647950 | Msa1281220:intron | 40.0% |
| !! | TGCTTTTAAACAGTAGCGGA+GGG | + | chr8_3:20647932-20647951 | Msa1281220:intron | 40.0% |
| ! | GCATTGACAGTGATGAAATG+CGG | - | chr8_3:20648147-20648166 | None:intergenic | 40.0% |
| CATTTCATCACTGTCAATGC+CGG | + | chr8_3:20648147-20648166 | Msa1281220:CDS | 40.0% | |
| GAAGGTAAGAATAAAGGACG+GGG | - | chr8_3:20648196-20648215 | None:intergenic | 40.0% | |
| GGAAGGTAAGAATAAAGGAC+GGG | - | chr8_3:20648197-20648216 | None:intergenic | 40.0% | |
| GATAAGACACATATTGCTCG+CGG | - | chr8_3:20648341-20648360 | None:intergenic | 40.0% | |
| GCGAGCAATATGTGTCTTAT+CGG | + | chr8_3:20648340-20648359 | Msa1281220:CDS | 40.0% | |
| ! | ATATGTGTCTTATCGGCTAC+TGG | + | chr8_3:20648347-20648366 | Msa1281220:CDS | 40.0% |
| ! | TCAAGATGGTGAGAAGCATA+TGG | + | chr8_3:20648679-20648698 | Msa1281220:intron | 40.0% |
| TAGTCAATAGTGGCTGATAG+CGG | + | chr8_3:20648820-20648839 | Msa1281220:intron | 40.0% | |
| !!! | AAACCTCTTTGAGGGCATTT+TGG | + | chr8_3:20648948-20648967 | Msa1281220:intron | 40.0% |
| !!! | AACCTCTTTGAGGGCATTTT+GGG | + | chr8_3:20648949-20648968 | Msa1281220:intron | 40.0% |
| TCCTCTGTTGTATGGTTTCT+CGG | + | chr8_3:20649024-20649043 | Msa1281220:intron | 40.0% | |
| CTTAAGTCCGCTATTGAGTT+TGG | + | chr8_3:20649394-20649413 | Msa1281220:intron | 40.0% | |
| CTACAGTCCAAACTCAATAG+CGG | - | chr8_3:20649404-20649423 | None:intergenic | 40.0% | |
| ATGCCTACTGATACTAACCA+AGG | + | chr8_3:20649541-20649560 | Msa1281220:CDS | 40.0% | |
| GTTCCTTGGTTAGTATCAGT+AGG | - | chr8_3:20649547-20649566 | None:intergenic | 40.0% | |
| TAACCAAGGAACAAGAAGCA+GGG | + | chr8_3:20649555-20649574 | Msa1281220:CDS | 40.0% | |
| ACCCAAGTGTAAAGAGTGAA+AGG | - | chr8_3:20649681-20649700 | None:intergenic | 40.0% | |
| GTTGCATCTTCCTCAAAAGA+AGG | + | chr8_3:20650235-20650254 | Msa1281220:intron | 40.0% | |
| ! | TCTTGGTTTATTTCAGGTGG+TGG | + | chr8_3:20650272-20650291 | Msa1281220:intron | 40.0% |
| GCCATCAAGATCTGAAAACA+AGG | + | chr8_3:20650316-20650335 | Msa1281220:CDS | 40.0% | |
| GGACATGTACTGCAAAATTC+TGG | + | chr8_3:20650453-20650472 | Msa1281220:CDS | 40.0% | |
| CAGATACCAGAGAACAGATT+TGG | - | chr8_3:20650708-20650727 | None:intergenic | 40.0% | |
| ! | AGCATCTTTGATTTATCGGC+TGG | + | chr8_3:20650781-20650800 | Msa1281220:three_prime_UTR | 40.0% |
| ! | GATTTATCGGCTGGTTACTT+AGG | + | chr8_3:20650790-20650809 | Msa1281220:three_prime_UTR | 40.0% |
| AAATAGGCAAACAAGGACCA+AGG | - | chr8_3:20650871-20650890 | None:intergenic | 40.0% | |
| AAGTGTGGAATCACAGTGAC+AGG | + | chr8_3:20645266-20645285 | Msa1281220:five_prime_UTR | 45.0% | |
| GAAAATGCTGGGTATGAAGC+AGG | + | chr8_3:20645434-20645453 | Msa1281220:intron | 45.0% | |
| !! | CATGTTTGGTGTTTGACACG+TGG | + | chr8_3:20646083-20646102 | Msa1281220:intron | 45.0% |
| TCGACATGTCAGTGTTGTGT+CGG | + | chr8_3:20646213-20646232 | Msa1281220:intron | 45.0% | |
| TTGTGTCGGGTGTTTGTATC+TGG | + | chr8_3:20646227-20646246 | Msa1281220:intron | 45.0% | |
| AGGTATCAATCCTGCGGTTA+CGG | + | chr8_3:20646371-20646390 | Msa1281220:CDS | 45.0% | |
| TCAGGGTTATGAACCTGGTT+TGG | - | chr8_3:20646450-20646469 | None:intergenic | 45.0% | |
| CTACTTCAGGGTTATGAACC+TGG | - | chr8_3:20646455-20646474 | None:intergenic | 45.0% | |
| AGAAGAAAAGGGGTAGACCA+AGG | + | chr8_3:20646577-20646596 | Msa1281220:CDS | 45.0% | |
| AGGGGTAGACCAAGGAAATA+TGG | + | chr8_3:20646585-20646604 | Msa1281220:CDS | 45.0% | |
| GGGGTAGACCAAGGAAATAT+GGG | + | chr8_3:20646586-20646605 | Msa1281220:CDS | 45.0% | |
| CAAGGAAATATGGGCCAGAT+GGG | + | chr8_3:20646595-20646614 | Msa1281220:CDS | 45.0% | |
| TGTGAAGCAAGTGAAACCAC+AGG | + | chr8_3:20646689-20646708 | Msa1281220:CDS | 45.0% | |
| GTGAAGCAAGTGAAACCACA+GGG | + | chr8_3:20646690-20646709 | Msa1281220:CDS | 45.0% | |
| TGAAGCAAGTGAAACCACAG+GGG | + | chr8_3:20646691-20646710 | Msa1281220:CDS | 45.0% | |
| ACAGGGGATGGAATACAAGA+GGG | + | chr8_3:20646707-20646726 | Msa1281220:CDS | 45.0% | |
| CCCCGAGTTTACAACTTTCT+AGG | + | chr8_3:20647079-20647098 | Msa1281220:intron | 45.0% | |
| GAAATGAATGGGCACTCTGA+TGG | + | chr8_3:20648108-20648127 | Msa1281220:CDS | 45.0% | |
| TGCATTCAAACATACCTCGC+CGG | - | chr8_3:20648169-20648188 | None:intergenic | 45.0% | |
| GTAAGAATAAAGGACGGGGA+TGG | - | chr8_3:20648192-20648211 | None:intergenic | 45.0% | |
| TCCGTCATCCAGATTCTTCT+GGG | + | chr8_3:20648390-20648409 | Msa1281220:CDS | 45.0% | |
| ! | AAAGTACCCCCAGAAGAATC+TGG | - | chr8_3:20648401-20648420 | None:intergenic | 45.0% |
| GATTTACTGACGCACCTCAT+AGG | - | chr8_3:20648426-20648445 | None:intergenic | 45.0% | |
| AGTCAGGAAATCAGCAGTGT+TGG | + | chr8_3:20648774-20648793 | Msa1281220:intron | 45.0% | |
| !!! | ACCTCTTTGAGGGCATTTTG+GGG | + | chr8_3:20648950-20648969 | Msa1281220:intron | 45.0% |
| ACCGAGAAACCATACAACAG+AGG | - | chr8_3:20649028-20649047 | None:intergenic | 45.0% | |
| CTATTTGTCACACCGCTATC+CGG | + | chr8_3:20649277-20649296 | Msa1281220:intron | 45.0% | |
| TATTTGTCACACCGCTATCC+GGG | + | chr8_3:20649278-20649297 | Msa1281220:intron | 45.0% | |
| TAGTAGTCAATCCCGGATAG+CGG | - | chr8_3:20649292-20649311 | None:intergenic | 45.0% | |
| AGGCATGAATGATCCAGACA+AGG | - | chr8_3:20649527-20649546 | None:intergenic | 45.0% | |
| CTAACCAAGGAACAAGAAGC+AGG | + | chr8_3:20649554-20649573 | Msa1281220:CDS | 45.0% | |
| GAAAGGATGTTTACCTGCAC+AGG | - | chr8_3:20649664-20649683 | None:intergenic | 45.0% | |
| !! | TGTTTGTGTCGGTGCTGTAT+AGG | - | chr8_3:20650101-20650120 | None:intergenic | 45.0% |
| ! | TGGTTTATTTCAGGTGGTGG+TGG | + | chr8_3:20650275-20650294 | Msa1281220:intron | 45.0% |
| ! | GGTTTATTTCAGGTGGTGGT+GGG | + | chr8_3:20650276-20650295 | Msa1281220:intron | 45.0% |
| GCTGGTGCATAATCAGACTT+AGG | - | chr8_3:20650345-20650364 | None:intergenic | 45.0% | |
| TGCAATGGCCTGAGTAAATG+TGG | - | chr8_3:20650367-20650386 | None:intergenic | 45.0% | |
| ! | TCAGCACTATTAGTTTGGGG+TGG | - | chr8_3:20650408-20650427 | None:intergenic | 45.0% |
| TGCTGATAAAGAGGATGCCA+TGG | + | chr8_3:20650422-20650441 | Msa1281220:CDS | 45.0% | |
| GCTGATAAAGAGGATGCCAT+GGG | + | chr8_3:20650423-20650442 | Msa1281220:CDS | 45.0% | |
| TATGCCGGACACAAGAAAAG+CGG | + | chr8_3:20650548-20650567 | Msa1281220:CDS | 45.0% | |
| ! | CAGTGTTGTTAGTTGCAGCT+AGG | + | chr8_3:20650755-20650774 | Msa1281220:three_prime_UTR | 45.0% |
| CTTAGGTAGATGCAGCACAA+TGG | + | chr8_3:20650807-20650826 | Msa1281220:three_prime_UTR | 45.0% | |
| !! | AAAAACAATTAATATATTTA+TGG | - | chr8_3:20645345-20645364 | None:intergenic | 5.0% |
| CGACATGTCAGTGTTGTGTC+GGG | + | chr8_3:20646214-20646233 | Msa1281220:intron | 50.0% | |
| ! | TGATACTGTCGGTGTTTCCC+CGG | + | chr8_3:20646527-20646546 | Msa1281220:CDS | 50.0% |
| ATCCAAACCTACACTCACCG+GGG | - | chr8_3:20646547-20646566 | None:intergenic | 50.0% | |
| CATCCAAACCTACACTCACC+GGG | - | chr8_3:20646548-20646567 | None:intergenic | 50.0% | |
| CCATCCAAACCTACACTCAC+CGG | - | chr8_3:20646549-20646568 | None:intergenic | 50.0% | |
| CCATCTGGCCCATATTTCCT+TGG | - | chr8_3:20646597-20646616 | None:intergenic | 50.0% | |
| CCAAGGAAATATGGGCCAGA+TGG | + | chr8_3:20646594-20646613 | Msa1281220:CDS | 50.0% | |
| GGCGGAGCTGAAGATGAAAT+AGG | - | chr8_3:20646648-20646667 | None:intergenic | 50.0% | |
| CTCTTGTATTCCATCCCCTG+TGG | - | chr8_3:20646708-20646727 | None:intergenic | 50.0% | |
| CACAGGGGATGGAATACAAG+AGG | + | chr8_3:20646706-20646725 | Msa1281220:CDS | 50.0% | |
| CTCCGTCATCCAGATTCTTC+TGG | + | chr8_3:20648389-20648408 | Msa1281220:CDS | 50.0% | |
| CCCCAGAAGAATCTGGATGA+CGG | - | chr8_3:20648394-20648413 | None:intergenic | 50.0% | |
| CCGTCATCCAGATTCTTCTG+GGG | + | chr8_3:20648391-20648410 | Msa1281220:CDS | 50.0% | |
| CGTCATCCAGATTCTTCTGG+GGG | + | chr8_3:20648392-20648411 | Msa1281220:CDS | 50.0% | |
| !! | TGGGGGTACTTTGACCTATG+AGG | + | chr8_3:20648409-20648428 | Msa1281220:CDS | 50.0% |
| TCCCCAAAATGCCCTCAAAG+AGG | - | chr8_3:20648954-20648973 | None:intergenic | 50.0% | |
| AGGTGGAATGAGTGTCTCAC+TGG | + | chr8_3:20649579-20649598 | Msa1281220:CDS | 50.0% | |
| GATGTTTACCTGCACAGGAG+TGG | - | chr8_3:20649659-20649678 | None:intergenic | 50.0% | |
| AGCATGAGCACTCGTGAACT+TGG | - | chr8_3:20649720-20649739 | None:intergenic | 50.0% | |
| AGTTCACGAGTGCTCATGCT+TGG | + | chr8_3:20649720-20649739 | Msa1281220:intron | 50.0% | |
| !! | TTGGTGTCAGACACACGTGT+TGG | + | chr8_3:20650192-20650211 | Msa1281220:intron | 50.0% |
| ! | TTCAGATCTTGATGGCCGCT+AGG | - | chr8_3:20650312-20650331 | None:intergenic | 50.0% |
| TGCACCAGCCACATTTACTC+AGG | + | chr8_3:20650356-20650375 | Msa1281220:CDS | 50.0% | |
| ATGGCCTGAGTAAATGTGGC+TGG | - | chr8_3:20650363-20650382 | None:intergenic | 50.0% | |
| ! | AGGTGCTGCAGATACTGCAA+TGG | - | chr8_3:20650382-20650401 | None:intergenic | 50.0% |
| ! | GCACTATTAGTTTGGGGTGG+CGG | - | chr8_3:20650405-20650424 | None:intergenic | 50.0% |
| GATAAAGAGGATGCCATGGG+TGG | + | chr8_3:20650426-20650445 | Msa1281220:CDS | 50.0% | |
| ! | TTTTCCCTTCGAAAGGCGGT+GGG | - | chr8_3:20650510-20650529 | None:intergenic | 50.0% |
| ! | CCAGTTTTCCCTTCGAAAGG+CGG | - | chr8_3:20650514-20650533 | None:intergenic | 50.0% |
| CGCCTTTCGAAGGGAAAACT+GGG | + | chr8_3:20650512-20650531 | Msa1281220:CDS | 50.0% | |
| ! | GACCCAGTTTTCCCTTCGAA+AGG | - | chr8_3:20650517-20650536 | None:intergenic | 50.0% |
| GGTCAACATGCACTCTATGC+CGG | + | chr8_3:20650533-20650552 | Msa1281220:CDS | 50.0% | |
| !!! | GTAGCCGCTTTTCTTGTGTC+CGG | - | chr8_3:20650555-20650574 | None:intergenic | 50.0% |
| TGATACGCGGATGGAGCTTC+TGG | - | chr8_3:20646405-20646424 | None:intergenic | 55.0% | |
| ! | CCTTGGTGCGACATGATACG+CGG | - | chr8_3:20646418-20646437 | None:intergenic | 55.0% |
| CTGCAGCTGTGGCTACTTCA+GGG | - | chr8_3:20646467-20646486 | None:intergenic | 55.0% | |
| AGCAGCAGTAGATCCTCCTG+CGG | - | chr8_3:20646490-20646509 | None:intergenic | 55.0% | |
| GCTCCTGCTGCTGATACTGT+CGG | + | chr8_3:20646516-20646535 | Msa1281220:CDS | 55.0% | |
| ACACCGACAGTATCAGCAGC+AGG | - | chr8_3:20646522-20646541 | None:intergenic | 55.0% | |
| TTCCCCGGTGAGTGTAGGTT+TGG | + | chr8_3:20646542-20646561 | Msa1281220:CDS | 55.0% | |
| CCGGTGAGTGTAGGTTTGGA+TGG | + | chr8_3:20646546-20646565 | Msa1281220:CDS | 55.0% | |
| GGCATGTTGACAGACCCATC+TGG | - | chr8_3:20646612-20646631 | None:intergenic | 55.0% | |
| GCAAGTGAAACCACAGGGGA+TGG | + | chr8_3:20646695-20646714 | Msa1281220:CDS | 55.0% | |
| !! | ATAGTGGCTGATAGCGGCGA+CGG | + | chr8_3:20648826-20648845 | Msa1281220:intron | 55.0% |
| ! | CTATTTGGTTCCGCACCGCT+GGG | - | chr8_3:20648869-20648888 | None:intergenic | 55.0% |
| AGCGGTGCGGAACCAAATAG+CGG | + | chr8_3:20648869-20648888 | Msa1281220:intron | 55.0% | |
| CAGCTGAAGCAGCCGCTATT+TGG | - | chr8_3:20648884-20648903 | None:intergenic | 55.0% | |
| CTGCCCTGCTTCTTGTTCCT+TGG | - | chr8_3:20649561-20649580 | None:intergenic | 55.0% | |
| CAAGGAACAAGAAGCAGGGC+AGG | + | chr8_3:20649559-20649578 | Msa1281220:CDS | 55.0% | |
| TATAGCTGCCACTCCTGTGC+AGG | + | chr8_3:20649648-20649667 | Msa1281220:CDS | 55.0% | |
| GTGGGAAGCTTTCTGCCTAG+CGG | + | chr8_3:20650294-20650313 | Msa1281220:CDS | 55.0% | |
| ! | CTATTAGTTTGGGGTGGCGG+AGG | - | chr8_3:20650402-20650421 | None:intergenic | 55.0% |
| AAAGAGGATGCCATGGGTGG+CGG | + | chr8_3:20650429-20650448 | Msa1281220:CDS | 55.0% | |
| ! | GTTTTCCCTTCGAAAGGCGG+TGG | - | chr8_3:20650511-20650530 | None:intergenic | 55.0% |
| CCGCCTTTCGAAGGGAAAAC+TGG | + | chr8_3:20650511-20650530 | Msa1281220:CDS | 55.0% | |
| GGTGCGACATGATACGCGGA+TGG | - | chr8_3:20646414-20646433 | None:intergenic | 60.0% | |
| CCGCGTATCATGTCGCACCA+AGG | + | chr8_3:20646415-20646434 | Msa1281220:CDS | 60.0% | |
| GCTGCAGCTGTGGCTACTTC+AGG | - | chr8_3:20646468-20646487 | None:intergenic | 60.0% | |
| GTATCAGCAGCAGGAGCAGC+AGG | - | chr8_3:20646513-20646532 | None:intergenic | 60.0% | |
| GGTGTTTCCCCGGTGAGTGT+AGG | + | chr8_3:20646537-20646556 | Msa1281220:CDS | 60.0% | |
| CATCACTGTCAATGCCGGCG+AGG | + | chr8_3:20648152-20648171 | Msa1281220:CDS | 60.0% | |
| CGCTGGGACGATTACCGTAG+CGG | - | chr8_3:20648853-20648872 | None:intergenic | 60.0% | |
| CGCTACGGTAATCGTCCCAG+CGG | + | chr8_3:20648851-20648870 | Msa1281220:intron | 60.0% | |
| ! | GCTATTTGGTTCCGCACCGC+TGG | - | chr8_3:20648870-20648889 | None:intergenic | 60.0% |
| GGAACAAGAAGCAGGGCAGG+TGG | + | chr8_3:20649562-20649581 | Msa1281220:CDS | 60.0% | |
| GTCTCACTGGCAAGCCCTGA+TGG | + | chr8_3:20649592-20649611 | Msa1281220:CDS | 60.0% | |
| AGCCCTGATGGTCGCGTAGT+AGG | + | chr8_3:20649604-20649623 | Msa1281220:CDS | 60.0% | |
| CGCCTACTACGCGACCATCA+GGG | - | chr8_3:20649609-20649628 | None:intergenic | 60.0% | |
| CCTGATGGTCGCGTAGTAGG+CGG | + | chr8_3:20649607-20649626 | Msa1281220:CDS | 60.0% | |
| GTAGTAGGCGGTGGAGTTGC+TGG | + | chr8_3:20649619-20649638 | Msa1281220:CDS | 60.0% | |
| TACATGTCCACCGCCACCCA+TGG | - | chr8_3:20650442-20650461 | None:intergenic | 60.0% | |
| TCCACCCACCGCCTTTCGAA+GGG | + | chr8_3:20650503-20650522 | Msa1281220:CDS | 60.0% | |
| GGCGCTATCACCGTAACCGC+AGG | - | chr8_3:20646384-20646403 | None:intergenic | 65.0% | |
| ATAGCGGCGACGGACCGCTA+CGG | + | chr8_3:20648836-20648855 | Msa1281220:intron | 65.0% | |
| CGGTAATCGTCCCAGCGGTG+CGG | + | chr8_3:20648856-20648875 | Msa1281220:intron | 65.0% | |
| CCGCCTACTACGCGACCATC+AGG | - | chr8_3:20649610-20649629 | None:intergenic | 65.0% | |
| GATGGTCGCGTAGTAGGCGG+TGG | + | chr8_3:20649610-20649629 | Msa1281220:CDS | 65.0% | |
| CTTCGAAAGGCGGTGGGTGG+AGG | - | chr8_3:20650504-20650523 | None:intergenic | 65.0% | |
| CTCCACCCACCGCCTTTCGA+AGG | + | chr8_3:20650502-20650521 | Msa1281220:CDS | 65.0% | |
| TCCCTTCGAAAGGCGGTGGG+TGG | - | chr8_3:20650507-20650526 | None:intergenic | 65.0% | |
| GTAGCCACAGCTGCAGCCGC+AGG | + | chr8_3:20646471-20646490 | Msa1281220:CDS | 70.0% | |
| TCCTCCTGCGGCTGCAGCTG+TGG | - | chr8_3:20646478-20646497 | None:intergenic | 70.0% | |
| ! | GAGGATGCCATGGGTGGCGG+TGG | + | chr8_3:20650432-20650451 | Msa1281220:CDS | 70.0% |
| GCCACAGCTGCAGCCGCAGG+AGG | + | chr8_3:20646474-20646493 | Msa1281220:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 20645018 | 20650929 | 20645018 | ID=Msa1281220;Name=Msa1281220 |
| chr8_3 | mRNA | 20645018 | 20650929 | 20645018 | ID=Msa1281220-mRNA-1;Parent=Msa1281220;Name=Msa1281220-mRNA-1;_AED=0.03;_eAED=0.03;_QI=149|1|1|1|0.66|0.57|7|324|360 |
| chr8_3 | exon | 20645018 | 20645076 | 20645018 | ID=Msa1281220-mRNA-1:exon:7522;Parent=Msa1281220-mRNA-1 |
| chr8_3 | exon | 20645247 | 20645287 | 20645247 | ID=Msa1281220-mRNA-1:exon:7523;Parent=Msa1281220-mRNA-1 |
| chr8_3 | exon | 20646308 | 20646756 | 20646308 | ID=Msa1281220-mRNA-1:exon:7524;Parent=Msa1281220-mRNA-1 |
| chr8_3 | exon | 20648106 | 20648173 | 20648106 | ID=Msa1281220-mRNA-1:exon:7525;Parent=Msa1281220-mRNA-1 |
| chr8_3 | exon | 20648299 | 20648430 | 20648299 | ID=Msa1281220-mRNA-1:exon:7526;Parent=Msa1281220-mRNA-1 |
| chr8_3 | exon | 20649505 | 20649669 | 20649505 | ID=Msa1281220-mRNA-1:exon:7527;Parent=Msa1281220-mRNA-1 |
| chr8_3 | exon | 20650288 | 20650929 | 20650288 | ID=Msa1281220-mRNA-1:exon:7528;Parent=Msa1281220-mRNA-1 |
| chr8_3 | five_prime_UTR | 20645018 | 20645076 | 20645018 | ID=Msa1281220-mRNA-1:five_prime_utr;Parent=Msa1281220-mRNA-1 |
| chr8_3 | five_prime_UTR | 20645247 | 20645287 | 20645247 | ID=Msa1281220-mRNA-1:five_prime_utr;Parent=Msa1281220-mRNA-1 |
| chr8_3 | five_prime_UTR | 20646308 | 20646356 | 20646308 | ID=Msa1281220-mRNA-1:five_prime_utr;Parent=Msa1281220-mRNA-1 |
| chr8_3 | CDS | 20646357 | 20646756 | 20646357 | ID=Msa1281220-mRNA-1:cds;Parent=Msa1281220-mRNA-1 |
| chr8_3 | CDS | 20648106 | 20648173 | 20648106 | ID=Msa1281220-mRNA-1:cds;Parent=Msa1281220-mRNA-1 |
| chr8_3 | CDS | 20648299 | 20648430 | 20648299 | ID=Msa1281220-mRNA-1:cds;Parent=Msa1281220-mRNA-1 |
| chr8_3 | CDS | 20649505 | 20649669 | 20649505 | ID=Msa1281220-mRNA-1:cds;Parent=Msa1281220-mRNA-1 |
| chr8_3 | CDS | 20650288 | 20650605 | 20650288 | ID=Msa1281220-mRNA-1:cds;Parent=Msa1281220-mRNA-1 |
| chr8_3 | three_prime_UTR | 20650606 | 20650929 | 20650606 | ID=Msa1281220-mRNA-1:three_prime_utr;Parent=Msa1281220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
