Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619990 | XP_024627450.2 | 91.912 | 272 | 5 | 1 | 1 | 272 | 1 | 255 | 4.83e-179 | 503 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619990 | sp|Q55CU8|PITC_DICDI | 32.524 | 206 | 130 | 4 | 67 | 264 | 73 | 277 | 1.27e-22 | 98.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044100 | Msa0619990 | 0.805492 | 1.300770e-49 | -8.615850e-47 |
| Msa0611380 | Msa0619990 | 0.836463 | 9.220983e-57 | -8.615850e-47 |
| Msa0619990 | Msa0628640 | 0.844420 | 7.646464e-59 | -8.615850e-47 |
| Msa0619990 | Msa0631120 | 0.855739 | 5.152547e-62 | -8.615850e-47 |
| Msa0619990 | Msa0666030 | 0.817632 | 2.982162e-52 | -8.615850e-47 |
| Msa0619990 | Msa0669340 | 0.864297 | 1.345200e-64 | -8.615850e-47 |
| Msa0619990 | Msa0684500 | 0.803378 | 3.587532e-49 | -8.615850e-47 |
| Msa0619990 | Msa0706360 | 0.824847 | 6.463980e-54 | -8.615850e-47 |
| Msa0619990 | Msa0706420 | 0.908683 | 1.306936e-81 | -8.615850e-47 |
| Msa0619990 | Msa0716450 | 0.853471 | 2.338092e-61 | -8.615850e-47 |
| Msa0619990 | Msa0717260 | 0.851584 | 8.067623e-61 | -8.615850e-47 |
| Msa0619990 | Msa0734230 | 0.805318 | 1.414169e-49 | -8.615850e-47 |
| Msa0619990 | Msa0758320 | 0.851861 | 6.733370e-61 | -8.615850e-47 |
| Msa0619990 | Msa0775440 | 0.831816 | 1.346962e-55 | -8.615850e-47 |
| Msa0619990 | Msa0799030 | 0.828584 | 8.287751e-55 | -8.615850e-47 |
| Msa0619990 | Msa0799700 | 0.800588 | 1.343526e-48 | -8.615850e-47 |
| Msa0619990 | Msa0810020 | 0.807086 | 6.002222e-50 | -8.615850e-47 |
| Msa0619990 | Msa0812820 | 0.820166 | 7.916419e-53 | -8.615850e-47 |
| Msa0619990 | Msa0837440 | 0.841668 | 4.133158e-58 | -8.615850e-47 |
| Msa0619990 | Msa0837980 | 0.860717 | 1.699529e-63 | -8.615850e-47 |
| Msa0619990 | Msa0853320 | 0.840830 | 6.866720e-58 | -8.615850e-47 |
| Msa0619990 | Msa1002620 | 0.824827 | 6.537459e-54 | -8.615850e-47 |
| Msa0619990 | Msa1033560 | 0.810310 | 1.228411e-50 | -8.615850e-47 |
| Msa0619990 | Msa1113850 | 0.814363 | 1.600681e-51 | -8.615850e-47 |
| Msa0619990 | Msa1160400 | 0.805378 | 1.373902e-49 | -8.615850e-47 |
| Msa0619990 | Msa1190120 | 0.805472 | 1.313395e-49 | -8.615850e-47 |
| Msa0619990 | Msa1197590 | 0.825496 | 4.540739e-54 | -8.615850e-47 |
| Msa0619990 | Msa1203000 | 0.833913 | 4.058543e-56 | -8.615850e-47 |
| Msa0619990 | Msa1211550 | 0.833163 | 6.243633e-56 | -8.615850e-47 |
| Msa0619990 | Msa1217940 | 0.815451 | 9.181185e-52 | -8.615850e-47 |
| Msa0619990 | Msa1219260 | 0.809968 | 1.455206e-50 | -8.615850e-47 |
| Msa0619990 | Msa1227950 | 0.821239 | 4.488233e-53 | -8.615850e-47 |
| Msa0619990 | Msa1227970 | 0.824109 | 9.643046e-54 | -8.615850e-47 |
| Msa0619990 | Msa1255280 | 0.827404 | 1.593662e-54 | -8.615850e-47 |
| Msa0619990 | Msa1266960 | 0.812433 | 4.249664e-51 | -8.615850e-47 |
| Msa0619990 | Msa1291870 | 0.818477 | 1.920665e-52 | -8.615850e-47 |
| Msa0619990 | Msa1339940 | 0.826343 | 2.857179e-54 | -8.615850e-47 |
| Msa0619990 | Msa1369700 | 0.800347 | 1.504352e-48 | -8.615850e-47 |
| Msa0619990 | Msa1397250 | 0.821606 | 3.692347e-53 | -8.615850e-47 |
| Msa0619990 | Msa1399560 | 0.818875 | 1.560159e-52 | -8.615850e-47 |
| Msa0619990 | Msa1401150 | 0.819620 | 1.055283e-52 | -8.615850e-47 |
| Msa0619990 | Msa1437190 | 0.804335 | 2.269319e-49 | -8.615850e-47 |
| Msa0619990 | Msa1443840 | 0.831715 | 1.426185e-55 | -8.615850e-47 |
| Msa0619990 | Msa1452060 | 0.826433 | 2.720490e-54 | -8.615850e-47 |
| Msa0619990 | Msa1460380 | 0.815887 | 7.342231e-52 | -8.615850e-47 |
| Msa0141100 | Msa0619990 | 0.849164 | 3.853514e-60 | -8.615850e-47 |
| Msa0183750 | Msa0619990 | 0.809945 | 1.472222e-50 | -8.615850e-47 |
| Msa0191040 | Msa0619990 | 0.821119 | 4.782398e-53 | -8.615850e-47 |
| Msa0225600 | Msa0619990 | 0.803845 | 2.870386e-49 | -8.615850e-47 |
| Msa0233340 | Msa0619990 | 0.820867 | 5.467376e-53 | -8.615850e-47 |
| Msa0374850 | Msa0619990 | 0.852741 | 3.783998e-61 | -8.615850e-47 |
| Msa0375090 | Msa0619990 | 0.848516 | 5.830365e-60 | -8.615850e-47 |
| Msa0470340 | Msa0619990 | 0.840080 | 1.078376e-57 | -8.615850e-47 |
| Msa0480950 | Msa0619990 | 0.802538 | 5.350200e-49 | -8.615850e-47 |
| Msa0251240 | Msa0619990 | 0.819034 | 1.435597e-52 | -8.615850e-47 |
| Msa0266450 | Msa0619990 | 0.815766 | 7.815341e-52 | -8.615850e-47 |
| Msa0311690 | Msa0619990 | 0.820957 | 5.212570e-53 | -8.615850e-47 |
| Msa0315250 | Msa0619990 | 0.800836 | 1.195750e-48 | -8.615850e-47 |
| Msa0326540 | Msa0619990 | 0.801715 | 7.899654e-49 | -8.615850e-47 |
| Msa0531430 | Msa0619990 | 0.865665 | 5.006985e-65 | -8.615850e-47 |
| Msa0534570 | Msa0619990 | 0.806129 | 9.554358e-50 | -8.615850e-47 |
| Msa0534590 | Msa0619990 | 0.846506 | 2.080911e-59 | -8.615850e-47 |
| Msa0565600 | Msa0619990 | 0.811871 | 5.635766e-51 | -8.615850e-47 |
| Msa0590800 | Msa0619990 | 0.850384 | 1.757800e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619990 | MtrunA17_Chr8g0385681 | 91.912 | 272 | 5 | 1 | 1 | 272 | 1 | 255 | 0.0 | 503 |
| Msa0619990 | MtrunA17_Chr8g0385691 | 87.259 | 259 | 22 | 1 | 13 | 271 | 4 | 251 | 3.16e-167 | 462 |
| Msa0619990 | MtrunA17_Chr3g0131581 | 74.026 | 231 | 60 | 0 | 41 | 271 | 41 | 271 | 3.24e-131 | 372 |
| Msa0619990 | MtrunA17_Chr1g0161441 | 40.417 | 240 | 134 | 4 | 38 | 272 | 3 | 238 | 1.22e-56 | 182 |
| Msa0619990 | MtrunA17_Chr1g0155071 | 34.826 | 201 | 124 | 6 | 67 | 263 | 43 | 240 | 2.33e-30 | 115 |
| Msa0619990 | MtrunA17_Chr7g0254621 | 29.000 | 200 | 136 | 4 | 67 | 263 | 44 | 240 | 7.47e-23 | 95.9 |
| Msa0619990 | MtrunA17_Chr3g0115591 | 29.515 | 227 | 153 | 6 | 40 | 262 | 21 | 244 | 2.00e-22 | 94.4 |
| Msa0619990 | MtrunA17_Chr4g0058811 | 28.049 | 164 | 116 | 2 | 65 | 227 | 69 | 231 | 6.51e-22 | 92.0 |
| Msa0619990 | MtrunA17_Chr8g0373391 | 31.527 | 203 | 134 | 4 | 67 | 266 | 43 | 243 | 8.45e-22 | 92.0 |
| Msa0619990 | MtrunA17_Chr4g0058791 | 25.434 | 173 | 127 | 2 | 65 | 236 | 67 | 238 | 1.08e-20 | 88.6 |
| Msa0619990 | MtrunA17_Chr5g0425421 | 28.902 | 173 | 119 | 3 | 67 | 238 | 46 | 215 | 7.17e-20 | 87.4 |
| Msa0619990 | MtrunA17_Chr1g0205531 | 25.980 | 204 | 145 | 3 | 38 | 236 | 6 | 208 | 1.67e-19 | 87.4 |
| Msa0619990 | MtrunA17_Chr3g0144891 | 32.420 | 219 | 129 | 5 | 62 | 262 | 90 | 307 | 2.16e-19 | 87.4 |
| Msa0619990 | MtrunA17_Chr4g0014901 | 32.558 | 215 | 126 | 7 | 64 | 262 | 266 | 477 | 2.32e-18 | 84.7 |
| Msa0619990 | MtrunA17_Chr3g0131071 | 30.476 | 210 | 132 | 5 | 67 | 262 | 247 | 456 | 5.98e-18 | 83.2 |
| Msa0619990 | MtrunA17_Chr3g0141821 | 32.243 | 214 | 126 | 7 | 72 | 267 | 96 | 308 | 6.82e-18 | 83.2 |
| Msa0619990 | MtrunA17_Chr4g0014911 | 30.047 | 213 | 133 | 6 | 64 | 262 | 134 | 344 | 1.44e-17 | 82.0 |
| Msa0619990 | MtrunA17_Chr4g0035391 | 30.400 | 250 | 154 | 7 | 32 | 262 | 69 | 317 | 5.57e-17 | 80.5 |
| Msa0619990 | MtrunA17_Chr1g0155521 | 30.357 | 224 | 137 | 6 | 62 | 267 | 105 | 327 | 6.50e-17 | 80.5 |
| Msa0619990 | MtrunA17_Chr2g0293201 | 30.734 | 218 | 134 | 9 | 60 | 262 | 134 | 349 | 1.02e-16 | 79.3 |
| Msa0619990 | MtrunA17_Chr3g0144911 | 32.057 | 209 | 123 | 6 | 72 | 262 | 113 | 320 | 1.93e-16 | 78.6 |
| Msa0619990 | MtrunA17_Chr4g0004981 | 28.436 | 211 | 133 | 6 | 67 | 262 | 123 | 330 | 4.08e-16 | 77.8 |
| Msa0619990 | MtrunA17_Chr5g0399151 | 31.169 | 231 | 114 | 8 | 63 | 262 | 109 | 325 | 6.63e-16 | 77.0 |
| Msa0619990 | MtrunA17_Chr8g0385291 | 29.493 | 217 | 129 | 7 | 64 | 262 | 176 | 386 | 5.29e-15 | 74.7 |
| Msa0619990 | MtrunA17_Chr3g0080051 | 27.600 | 250 | 153 | 8 | 38 | 265 | 73 | 316 | 1.75e-14 | 73.2 |
| Msa0619990 | MtrunA17_Chr7g0236461 | 31.982 | 222 | 112 | 10 | 69 | 262 | 100 | 310 | 1.84e-14 | 73.2 |
| Msa0619990 | MtrunA17_Chr4g0035381 | 27.111 | 225 | 131 | 6 | 63 | 262 | 78 | 294 | 6.06e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619990 | AT1G01630.1 | 64.348 | 230 | 82 | 0 | 42 | 271 | 25 | 254 | 8.85e-112 | 323 |
| Msa0619990 | AT1G14820.3 | 39.831 | 236 | 136 | 3 | 42 | 272 | 3 | 237 | 7.45e-50 | 165 |
| Msa0619990 | AT1G14820.2 | 41.935 | 217 | 120 | 3 | 61 | 272 | 9 | 224 | 7.85e-49 | 162 |
| Msa0619990 | AT1G14820.1 | 41.935 | 217 | 120 | 3 | 61 | 272 | 9 | 224 | 7.85e-49 | 162 |
| Msa0619990 | AT1G75170.2 | 33.171 | 205 | 130 | 5 | 66 | 266 | 43 | 244 | 3.82e-28 | 109 |
| Msa0619990 | AT1G75170.1 | 33.171 | 205 | 130 | 5 | 66 | 266 | 43 | 244 | 3.82e-28 | 109 |
| Msa0619990 | AT4G08690.2 | 31.004 | 229 | 149 | 6 | 39 | 262 | 14 | 238 | 1.16e-27 | 108 |
| Msa0619990 | AT4G08690.1 | 31.004 | 229 | 149 | 6 | 39 | 262 | 14 | 238 | 1.16e-27 | 108 |
| Msa0619990 | AT4G08690.3 | 31.004 | 229 | 149 | 6 | 39 | 262 | 14 | 238 | 1.16e-27 | 108 |
| Msa0619990 | AT4G36640.1 | 33.333 | 204 | 129 | 6 | 67 | 266 | 41 | 241 | 1.78e-25 | 102 |
| Msa0619990 | AT4G36640.3 | 33.333 | 204 | 129 | 6 | 67 | 266 | 41 | 241 | 1.78e-25 | 102 |
| Msa0619990 | AT1G22180.2 | 30.568 | 229 | 152 | 6 | 39 | 263 | 17 | 242 | 1.57e-24 | 100 |
| Msa0619990 | AT1G22180.4 | 30.568 | 229 | 152 | 6 | 39 | 263 | 17 | 242 | 1.57e-24 | 100 |
| Msa0619990 | AT5G63060.2 | 30.488 | 164 | 112 | 2 | 65 | 227 | 35 | 197 | 1.08e-21 | 90.9 |
| Msa0619990 | AT5G63060.1 | 30.488 | 164 | 112 | 2 | 65 | 227 | 70 | 232 | 1.76e-21 | 91.3 |
| Msa0619990 | AT4G39180.3 | 28.369 | 282 | 179 | 7 | 4 | 263 | 27 | 307 | 5.97e-20 | 89.7 |
| Msa0619990 | AT4G39180.2 | 28.369 | 282 | 179 | 7 | 4 | 263 | 27 | 307 | 5.97e-20 | 89.7 |
| Msa0619990 | AT4G39180.1 | 28.369 | 282 | 179 | 7 | 4 | 263 | 27 | 307 | 6.52e-20 | 89.4 |
| Msa0619990 | AT4G09160.2 | 28.226 | 248 | 151 | 7 | 40 | 262 | 276 | 521 | 9.26e-20 | 89.4 |
| Msa0619990 | AT4G09160.3 | 28.226 | 248 | 151 | 7 | 40 | 262 | 276 | 521 | 9.80e-20 | 89.0 |
| Msa0619990 | AT4G09160.1 | 28.226 | 248 | 151 | 7 | 40 | 262 | 301 | 546 | 1.03e-19 | 89.0 |
| Msa0619990 | AT1G22180.3 | 29.444 | 180 | 121 | 5 | 87 | 263 | 1 | 177 | 4.17e-18 | 81.6 |
| Msa0619990 | AT1G22180.1 | 29.444 | 180 | 121 | 5 | 87 | 263 | 1 | 177 | 4.17e-18 | 81.6 |
| Msa0619990 | AT3G24840.7 | 31.518 | 257 | 142 | 10 | 32 | 262 | 65 | 313 | 6.89e-18 | 83.6 |
| Msa0619990 | AT3G24840.3 | 31.518 | 257 | 142 | 10 | 32 | 262 | 65 | 313 | 6.89e-18 | 83.6 |
| Msa0619990 | AT3G24840.5 | 31.518 | 257 | 142 | 10 | 32 | 262 | 65 | 313 | 6.89e-18 | 83.6 |
| Msa0619990 | AT3G24840.1 | 31.518 | 257 | 142 | 10 | 32 | 262 | 65 | 313 | 7.01e-18 | 83.6 |
| Msa0619990 | AT3G24840.6 | 31.518 | 257 | 142 | 10 | 32 | 262 | 65 | 313 | 7.01e-18 | 83.6 |
| Msa0619990 | AT3G24840.4 | 31.518 | 257 | 142 | 10 | 32 | 262 | 65 | 313 | 7.01e-18 | 83.6 |
| Msa0619990 | AT3G24840.2 | 31.518 | 257 | 142 | 10 | 32 | 262 | 65 | 313 | 7.01e-18 | 83.6 |
| Msa0619990 | AT1G75170.3 | 32.653 | 147 | 94 | 3 | 123 | 266 | 17 | 161 | 7.89e-18 | 80.1 |
| Msa0619990 | AT4G36640.2 | 30.435 | 184 | 121 | 6 | 87 | 266 | 1 | 181 | 3.76e-17 | 79.0 |
| Msa0619990 | AT2G16380.2 | 30.620 | 258 | 158 | 9 | 25 | 262 | 42 | 298 | 7.59e-17 | 80.5 |
| Msa0619990 | AT2G16380.1 | 30.620 | 258 | 158 | 9 | 25 | 262 | 42 | 298 | 7.59e-17 | 80.5 |
| Msa0619990 | AT3G22410.1 | 28.571 | 196 | 132 | 5 | 47 | 236 | 7 | 200 | 1.74e-16 | 79.0 |
| Msa0619990 | AT1G05370.1 | 28.994 | 169 | 119 | 1 | 72 | 240 | 47 | 214 | 2.53e-16 | 78.6 |
| Msa0619990 | AT4G39170.2 | 33.028 | 218 | 127 | 7 | 63 | 262 | 102 | 318 | 9.98e-16 | 77.4 |
| Msa0619990 | AT4G39170.1 | 33.028 | 218 | 127 | 7 | 63 | 262 | 102 | 318 | 1.01e-15 | 77.4 |
| Msa0619990 | AT1G30690.1 | 29.327 | 208 | 136 | 7 | 64 | 262 | 217 | 422 | 2.18e-15 | 76.3 |
| Msa0619990 | AT1G30690.2 | 29.327 | 208 | 136 | 7 | 64 | 262 | 217 | 422 | 2.18e-15 | 76.3 |
| Msa0619990 | AT2G21520.1 | 31.193 | 218 | 131 | 6 | 63 | 262 | 104 | 320 | 2.53e-15 | 75.9 |
| Msa0619990 | AT2G21520.2 | 31.193 | 218 | 131 | 6 | 63 | 262 | 108 | 324 | 2.56e-15 | 75.9 |
| Msa0619990 | AT2G21520.3 | 31.193 | 218 | 131 | 6 | 63 | 262 | 108 | 324 | 2.56e-15 | 75.9 |
| Msa0619990 | AT1G19650.2 | 30.189 | 212 | 129 | 5 | 69 | 262 | 32 | 242 | 8.55e-15 | 74.3 |
| Msa0619990 | AT1G19650.1 | 30.622 | 209 | 126 | 5 | 72 | 262 | 107 | 314 | 1.03e-14 | 74.3 |
| Msa0619990 | AT5G47510.4 | 29.358 | 218 | 135 | 7 | 63 | 262 | 45 | 261 | 1.13e-14 | 73.6 |
| Msa0619990 | AT5G47510.2 | 29.358 | 218 | 135 | 7 | 63 | 262 | 45 | 261 | 1.15e-14 | 73.2 |
| Msa0619990 | AT5G47510.1 | 29.358 | 218 | 135 | 7 | 63 | 262 | 44 | 260 | 1.17e-14 | 73.6 |
| Msa0619990 | AT3G51670.1 | 26.923 | 208 | 139 | 5 | 67 | 262 | 82 | 288 | 1.28e-14 | 73.6 |
| Msa0619990 | AT1G19650.3 | 31.579 | 209 | 124 | 6 | 72 | 262 | 107 | 314 | 1.33e-14 | 73.6 |
| Msa0619990 | AT1G72160.1 | 27.962 | 211 | 134 | 6 | 67 | 262 | 164 | 371 | 1.02e-13 | 71.2 |
| Msa0619990 | AT5G56160.1 | 28.774 | 212 | 127 | 8 | 72 | 262 | 97 | 305 | 3.89e-11 | 63.5 |
| Msa0619990 | AT5G56160.3 | 28.774 | 212 | 127 | 8 | 72 | 262 | 97 | 305 | 3.89e-11 | 63.5 |
| Msa0619990 | AT5G56160.2 | 28.774 | 212 | 127 | 8 | 72 | 262 | 97 | 305 | 4.41e-11 | 63.2 |
| Msa0619990 | AT1G55840.1 | 27.004 | 237 | 142 | 9 | 48 | 258 | 9 | 240 | 5.24e-11 | 62.4 |
| Msa0619990 | AT5G47730.4 | 27.094 | 203 | 129 | 7 | 72 | 258 | 41 | 240 | 7.16e-11 | 62.4 |
| Msa0619990 | AT5G47730.1 | 27.094 | 203 | 129 | 7 | 72 | 258 | 41 | 240 | 7.16e-11 | 62.4 |
Find 70 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACTTCCCCAATCTTTC+AGG | 0.132673 | 4_2:+71295566 | None:intergenic |
| GGCTCTCACAAGACGGATTT+TGG | 0.165763 | 4_2:+71300585 | None:intergenic |
| CTCATAATTTATGTTATATA+TGG | 0.218621 | 4_2:-71294942 | Msa0619990:three_prime_UTR |
| AGTGAAGGGTTGTCATAATA+AGG | 0.249832 | 4_2:-71300713 | Msa0619990:CDS |
| AACTATATATACCTGCAAAA+TGG | 0.312721 | 4_2:+71295696 | None:intergenic |
| GACCAATCTTGTCGCGTCCT+TGG | 0.313425 | 4_2:+71296088 | None:intergenic |
| TTATAGTCTCATTAATTTCC+CGG | 0.334057 | 4_2:+71295025 | None:intergenic |
| AGGCCTTGTCGTCTGCAATT+TGG | 0.345554 | 4_2:+71296115 | None:intergenic |
| ACCAATCTTGTCGCGTCCTT+GGG | 0.377029 | 4_2:+71296089 | None:intergenic |
| GGATTACTACCCTGAAAGAT+TGG | 0.396743 | 4_2:-71295576 | Msa0619990:CDS |
| AGTCAACTCCCTGAGATATA+TGG | 0.398239 | 4_2:-71295100 | Msa0619990:CDS |
| ATTAGTTTAATTAGATATCC+TGG | 0.398913 | 4_2:+71295053 | None:intergenic |
| AAGAAGAATTCCATGGTTAC+TGG | 0.399039 | 4_2:+71294883 | None:intergenic |
| AGTATTTGTGGAGAACAATA+AGG | 0.402414 | 4_2:-71295155 | Msa0619990:CDS |
| TGTTCCTCAAGTACTTGAAA+TGG | 0.405903 | 4_2:-71296188 | Msa0619990:CDS |
| AGACATTCATTTGTTCCAAA+TGG | 0.425215 | 4_2:-71296165 | Msa0619990:CDS |
| GGAATTCTTCTTTGCAATCT+CGG | 0.425699 | 4_2:-71294872 | Msa0619990:three_prime_UTR |
| GATTACTACCCTGAAAGATT+GGG | 0.426754 | 4_2:-71295575 | Msa0619990:CDS |
| GATAGAGATATGGAACCATT+TGG | 0.426836 | 4_2:+71296150 | None:intergenic |
| ATCCTTGCAGATAGTATTTG+TGG | 0.435946 | 4_2:-71295167 | Msa0619990:intron |
| GGTTGTCATAATAAGGGAAC+AGG | 0.456087 | 4_2:-71300706 | Msa0619990:CDS |
| CCAGGACAAGAGAAATTTGT+TGG | 0.459213 | 4_2:-71295784 | Msa0619990:CDS |
| CCACCGAAGGCAATGAGTAT+AGG | 0.460670 | 4_2:+71296063 | None:intergenic |
| AGTTTGCCACCATATATCTC+AGG | 0.466880 | 4_2:+71295091 | None:intergenic |
| ATGAACCTGTGATAGAGATA+TGG | 0.468267 | 4_2:+71296140 | None:intergenic |
| GCCCAAGGACGCGACAAGAT+TGG | 0.471686 | 4_2:-71296090 | Msa0619990:CDS |
| CCAACAAATTTCTCTTGTCC+TGG | 0.481649 | 4_2:+71295784 | None:intergenic |
| ACAACTTCCCCAATCTTTCA+GGG | 0.493166 | 4_2:+71295567 | None:intergenic |
| GTGAAGGGTTGTCATAATAA+GGG | 0.498355 | 4_2:-71300712 | Msa0619990:CDS |
| ATTGAAAATGGAAGCAGTGA+AGG | 0.507099 | 4_2:-71300728 | None:intergenic |
| TTTAATTAGATATCCTGGAT+GGG | 0.507649 | 4_2:+71295058 | None:intergenic |
| AAAAGAAAATAGTCAAAGAA+AGG | 0.508788 | 4_2:+71294966 | None:intergenic |
| CGACCTATACTCATTGCCTT+CGG | 0.509268 | 4_2:-71296066 | Msa0619990:CDS |
| AGATTTAGCGTATGTAACTA+AGG | 0.511949 | 4_2:-71300665 | Msa0619990:CDS |
| GACGACAAGGCCTTCGCCCA+AGG | 0.521166 | 4_2:-71296105 | Msa0619990:CDS |
| GTTTAATTAGATATCCTGGA+TGG | 0.523947 | 4_2:+71295057 | None:intergenic |
| AAACATTATCAAAAGAAAGA+TGG | 0.532424 | 4_2:-71296039 | Msa0619990:CDS |
| ATAGGTAGTACCTTGGAAGA+TGG | 0.533530 | 4_2:+71300544 | None:intergenic |
| CTTGTCGCGTCCTTGGGCGA+AGG | 0.534331 | 4_2:+71296095 | None:intergenic |
| TGTTGGTATAGCAGAACTCA+AGG | 0.548158 | 4_2:-71295767 | Msa0619990:CDS |
| TGACAACAAAACTAAGAAGA+AGG | 0.549893 | 4_2:-71295486 | Msa0619990:intron |
| GTCTCCATTTCAAGTACTTG+AGG | 0.552376 | 4_2:+71296184 | None:intergenic |
| TATAGCAGAACTCAAGGGAT+GGG | 0.554676 | 4_2:-71295761 | Msa0619990:CDS |
| AGTGATGTTCGTGGATACAT+TGG | 0.558957 | 4_2:-71295727 | Msa0619990:CDS |
| ACTGCAATTAGTCCCCATCC+AGG | 0.559870 | 4_2:-71295071 | Msa0619990:CDS |
| TTAATTAGATATCCTGGATG+GGG | 0.560226 | 4_2:+71295059 | None:intergenic |
| TGGTTCCATATCTCTATCAC+AGG | 0.560409 | 4_2:-71296145 | Msa0619990:CDS |
| AGTTGTATTTCCAGTAACCA+TGG | 0.562231 | 4_2:-71294893 | Msa0619990:three_prime_UTR |
| CCTATACTCATTGCCTTCGG+TGG | 0.567691 | 4_2:-71296063 | Msa0619990:CDS |
| TACTCAAATAGTGATGTTCG+TGG | 0.571932 | 4_2:-71295736 | Msa0619990:CDS |
| CTAATTAAACTAATCAACAC+CGG | 0.572195 | 4_2:-71295044 | Msa0619990:exon |
| TGGATCTTGTGTTTCAACAA+AGG | 0.574409 | 4_2:+71300564 | None:intergenic |
| GATTGCAAAGAAGAATTCCA+TGG | 0.576206 | 4_2:+71294876 | None:intergenic |
| TCGTGATTTAGATGTGGAGA+AGG | 0.580581 | 4_2:-71296220 | Msa0619990:CDS |
| TTGAAAATGGAAGCAGTGAA+GGG | 0.584047 | 4_2:-71300727 | None:intergenic |
| ACAAATTTCTCTTGTCCTGG+TGG | 0.587062 | 4_2:+71295787 | None:intergenic |
| TGATGTATCAGCATGCCACC+AGG | 0.599653 | 4_2:-71295802 | Msa0619990:intron |
| CAACAAAGGCTCTCACAAGA+CGG | 0.602126 | 4_2:+71300578 | None:intergenic |
| AACACAAGATCCATCTTCCA+AGG | 0.605847 | 4_2:-71300554 | Msa0619990:intron |
| TAGCCAAATTGCAGACGACA+AGG | 0.617317 | 4_2:-71296118 | Msa0619990:CDS |
| GTATAGCAGAACTCAAGGGA+TGG | 0.617434 | 4_2:-71295762 | Msa0619990:CDS |
| ATTAGAAGCAAAAGCACAAG+TGG | 0.621641 | 4_2:-71300641 | Msa0619990:CDS |
| TTCTTGATAAACTATGTGCA+AGG | 0.626670 | 4_2:-71295910 | Msa0619990:intron |
| GTTTGCCACCATATATCTCA+GGG | 0.627343 | 4_2:+71295092 | None:intergenic |
| ATAGCAGAACTCAAGGGATG+GGG | 0.630684 | 4_2:-71295760 | Msa0619990:CDS |
| ATTACTACCCTGAAAGATTG+GGG | 0.630792 | 4_2:-71295574 | Msa0619990:CDS |
| ACGAGCTCGTGATTTAGATG+TGG | 0.640280 | 4_2:-71296226 | Msa0619990:CDS |
| GTTGGTATAGCAGAACTCAA+GGG | 0.644604 | 4_2:-71295766 | Msa0619990:CDS |
| TAATTAAACTAATCAACACC+GGG | 0.646365 | 4_2:-71295043 | Msa0619990:three_prime_UTR |
| CAACTCCCTGAGATATATGG+TGG | 0.663200 | 4_2:-71295097 | Msa0619990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGAAAAACATATAAAT+CGG | + | chr4_2:71295624-71295643 | None:intergenic | 10.0% |
| !!! | AAACTAATTTTATCAATTTA+AGG | + | chr4_2:71296194-71296213 | None:intergenic | 10.0% |
| !!! | TTAAAATTTTACTATATCAA+TGG | + | chr4_2:71297170-71297189 | None:intergenic | 10.0% |
| !!! | TTGATATAGTAAAATTTTAA+AGG | - | chr4_2:71297170-71297189 | Msa0619990:intron | 10.0% |
| !!! | TGATATAGTAAAATTTTAAA+GGG | - | chr4_2:71297171-71297190 | Msa0619990:intron | 10.0% |
| !!! | AATGTACTATTAATTTATTT+TGG | - | chr4_2:71297585-71297604 | Msa0619990:intron | 10.0% |
| !!! | CATTTTTATTAATTTTTTGA+GGG | + | chr4_2:71298044-71298063 | None:intergenic | 10.0% |
| !!! | TCATTTTTATTAATTTTTTG+AGG | + | chr4_2:71298045-71298064 | None:intergenic | 10.0% |
| !!! | ATCTTTTTTCATTTATTTTT+TGG | + | chr4_2:71298390-71298409 | None:intergenic | 10.0% |
| !!! | TGAACTTTTTTTAAATAAAA+AGG | + | chr4_2:71298828-71298847 | None:intergenic | 10.0% |
| !! | AATTATTCTCAATAAATAAT+TGG | + | chr4_2:71300140-71300159 | None:intergenic | 10.0% |
| !!! | GTCTGATTATTTTTTTTTAA+AGG | - | chr4_2:71295366-71295385 | Msa0619990:intron | 15.0% |
| !!! | GATTATTTTTTTTTAAAGGA+AGG | - | chr4_2:71295370-71295389 | Msa0619990:intron | 15.0% |
| !! | TCAAATTATATAAATACCAA+GGG | - | chr4_2:71296475-71296494 | Msa0619990:intron | 15.0% |
| !! | TGAATAAATAACAAAGTTTA+TGG | - | chr4_2:71296552-71296571 | Msa0619990:intron | 15.0% |
| !! | AATATTAATTGACTAAGATA+AGG | + | chr4_2:71296609-71296628 | None:intergenic | 15.0% |
| !! | ATAATAATTTGATATAAGGA+AGG | - | chr4_2:71297784-71297803 | Msa0619990:intron | 15.0% |
| !! | TCATAAAAATTCATATTGAA+TGG | - | chr4_2:71298231-71298250 | Msa0619990:intron | 15.0% |
| !! | GTTATGTTAAACATATTTAT+TGG | + | chr4_2:71298965-71298984 | None:intergenic | 15.0% |
| !! | ATGTTTAACATAACATTTAA+TGG | - | chr4_2:71298971-71298990 | Msa0619990:intron | 15.0% |
| !! | AGTGCTATATTAATATATAA+AGG | + | chr4_2:71299904-71299923 | None:intergenic | 15.0% |
| !! | ATGAGATGTTATATATAATT+TGG | + | chr4_2:71300274-71300293 | None:intergenic | 15.0% |
| !! | CTCATAATTTATGTTATATA+TGG | - | chr4_2:71300590-71300609 | Msa0619990:CDS | 15.0% |
| !!! | TTTTTGTAATATTATAGACG+TGG | + | chr4_2:71295048-71295067 | None:intergenic | 20.0% |
| !! | TTACAAAAAATTGCTTCATA+TGG | - | chr4_2:71295059-71295078 | Msa0619990:exon | 20.0% |
| !!! | TTTTAATTAGGAGTCATATA+CGG | - | chr4_2:71295578-71295597 | Msa0619990:CDS | 20.0% |
| !!! | TATACGGTTTTGTATTTTTT+TGG | - | chr4_2:71295594-71295613 | Msa0619990:intron | 20.0% |
| !!! | ATACGGTTTTGTATTTTTTT+GGG | - | chr4_2:71295595-71295614 | Msa0619990:intron | 20.0% |
| !! | GTTAGAGCAAATATTTAAAT+CGG | + | chr4_2:71295653-71295672 | None:intergenic | 20.0% |
| !!! | TGTTTTCTTTTTTGTTTTGA+CGG | - | chr4_2:71295941-71295960 | Msa0619990:intron | 20.0% |
| !! | AAAAAGAATAGATCAAATGT+AGG | + | chr4_2:71296013-71296032 | None:intergenic | 20.0% |
| !!! | CATTTGATCTATTCTTTTTT+TGG | - | chr4_2:71296014-71296033 | Msa0619990:intron | 20.0% |
| !!! | TTTAAAGGTTTTTTCAATTG+AGG | - | chr4_2:71296254-71296273 | Msa0619990:CDS | 20.0% |
| !!! | TTAAAGGTTTTTTCAATTGA+GGG | - | chr4_2:71296255-71296274 | Msa0619990:CDS | 20.0% |
| !! | GTCAAATTATATAAATACCA+AGG | - | chr4_2:71296474-71296493 | Msa0619990:intron | 20.0% |
| !!! | CTTAATATTCAACTTCTTTT+AGG | + | chr4_2:71296670-71296689 | None:intergenic | 20.0% |
| !! | AAAAGAAGTTGAATATTAAG+TGG | - | chr4_2:71296670-71296689 | Msa0619990:intron | 20.0% |
| !! | TACAAACAAATTATACTATC+AGG | + | chr4_2:71296919-71296938 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTTCTTATTCATT+TGG | - | chr4_2:71297054-71297073 | Msa0619990:intron | 20.0% |
| !!! | ATAGTAAAATTTTAAAGGGA+TGG | - | chr4_2:71297175-71297194 | Msa0619990:intron | 20.0% |
| !! | TTGTTTAAATTGATATGAAC+CGG | + | chr4_2:71297714-71297733 | None:intergenic | 20.0% |
| !! | GGTGAAAAAGTAAATTATTA+TGG | - | chr4_2:71297805-71297824 | Msa0619990:intron | 20.0% |
| !! | AGATTACAAGGATAATTTAT+GGG | - | chr4_2:71297859-71297878 | Msa0619990:intron | 20.0% |
| !!! | ATTTTATGATTCTCAACAAT+GGG | + | chr4_2:71298146-71298165 | None:intergenic | 20.0% |
| !! | TTGAGAATCATAAAATCATA+GGG | - | chr4_2:71298150-71298169 | Msa0619990:intron | 20.0% |
| !! | ATTATAAATGCCATCAATAT+GGG | + | chr4_2:71298554-71298573 | None:intergenic | 20.0% |
| !! | AATTATAAATGCCATCAATA+TGG | + | chr4_2:71298555-71298574 | None:intergenic | 20.0% |
| !!! | TTTTCATACCTCTAAAAAAA+AGG | - | chr4_2:71298877-71298896 | Msa0619990:intron | 20.0% |
| !!! | GAAAAATACCTTTTTTTTAG+AGG | + | chr4_2:71298888-71298907 | None:intergenic | 20.0% |
| !! | AAACATTATCAAAAGAAAGA+TGG | - | chr4_2:71299493-71299512 | Msa0619990:intron | 20.0% |
| !!! | TAATTCCTTATTTCAATCTA+TGG | - | chr4_2:71299649-71299668 | Msa0619990:intron | 20.0% |
| !! | TATATATTAATATAGCACTC+AGG | - | chr4_2:71299905-71299924 | Msa0619990:intron | 20.0% |
| !! | AAGGTGATGTTTAAATTATA+TGG | - | chr4_2:71300065-71300084 | Msa0619990:intron | 20.0% |
| !! | AGGTGATGTTTAAATTATAT+GGG | - | chr4_2:71300066-71300085 | Msa0619990:intron | 20.0% |
| !! | GAGAATAATTAATTCATATG+AGG | - | chr4_2:71300150-71300169 | Msa0619990:intron | 20.0% |
| !! | TACATTAACATGTACTTTAA+GGG | - | chr4_2:71300232-71300251 | Msa0619990:intron | 20.0% |
| !! | ATATATAACATCTCATTGTA+TGG | - | chr4_2:71300278-71300297 | Msa0619990:intron | 20.0% |
| !!! | TGTTTAAGTTTGAAATATTG+AGG | - | chr4_2:71300315-71300334 | Msa0619990:intron | 20.0% |
| !!! | GTTTAAGTTTGAAATATTGA+GGG | - | chr4_2:71300316-71300335 | Msa0619990:intron | 20.0% |
| !!! | ATTAGTTTAATTAGATATCC+TGG | + | chr4_2:71300482-71300501 | None:intergenic | 20.0% |
| !! | AAAAGAAAATAGTCAAAGAA+AGG | + | chr4_2:71300569-71300588 | None:intergenic | 20.0% |
| ! | TAAGAAATGAGGAAGATAAT+AGG | + | chr4_2:71295009-71295028 | None:intergenic | 25.0% |
| ! | TATGAGTATGATAAGAAATG+AGG | + | chr4_2:71295020-71295039 | None:intergenic | 25.0% |
| ! | AAAAATTGCTTCATATGGTT+TGG | - | chr4_2:71295064-71295083 | Msa0619990:CDS | 25.0% |
| ! | AGTATGAAACATGTGAATAT+AGG | + | chr4_2:71295098-71295117 | None:intergenic | 25.0% |
| ! | ACTAACATTTGATATCCTTA+AGG | + | chr4_2:71295324-71295343 | None:intergenic | 25.0% |
| !!! | TTAGTCATTTTATCTACTAC+CGG | - | chr4_2:71295487-71295506 | Msa0619990:CDS | 25.0% |
| !!! | GAACGTAAAATATCACTTTT+CGG | + | chr4_2:71295527-71295546 | None:intergenic | 25.0% |
| ! | CCTAATTAAAAATGTTCTGT+CGG | + | chr4_2:71295569-71295588 | None:intergenic | 25.0% |
| !!! | TAAAGGTTTTTTCAATTGAG+GGG | - | chr4_2:71296256-71296275 | Msa0619990:CDS | 25.0% |
| !!! | CGTACTTTTTCATTCATTTA+GGG | + | chr4_2:71296452-71296471 | None:intergenic | 25.0% |
| ! | CCTAAATGAATGAAAAAGTA+CGG | - | chr4_2:71296450-71296469 | Msa0619990:intron | 25.0% |
| !!! | TAAAATTTTAAAGGGATGGT+TGG | - | chr4_2:71297179-71297198 | Msa0619990:intron | 25.0% |
| !!! | AAAATTTTAAAGGGATGGTT+GGG | - | chr4_2:71297180-71297199 | Msa0619990:intron | 25.0% |
| !!! | CATGGATATATTTTTAGAGA+GGG | + | chr4_2:71297394-71297413 | None:intergenic | 25.0% |
| !!! | TCATGGATATATTTTTAGAG+AGG | + | chr4_2:71297395-71297414 | None:intergenic | 25.0% |
| ! | TTTATTCATCAGATGAATCA+TGG | + | chr4_2:71297412-71297431 | None:intergenic | 25.0% |
| ! | TTCCATCTTTCATATATCTA+TGG | - | chr4_2:71297461-71297480 | Msa0619990:intron | 25.0% |
| ! | TCCATCTTTCATATATCTAT+GGG | - | chr4_2:71297462-71297481 | Msa0619990:intron | 25.0% |
| ! | TCTGAAAAATATTGTAAGAG+AGG | + | chr4_2:71297522-71297541 | None:intergenic | 25.0% |
| !!! | GTGTATCACTTTTTTTAACA+AGG | + | chr4_2:71297654-71297673 | None:intergenic | 25.0% |
| ! | TTATTATGGTAAGATGTAGT+AGG | - | chr4_2:71297819-71297838 | Msa0619990:intron | 25.0% |
| ! | GAGATTACAAGGATAATTTA+TGG | - | chr4_2:71297858-71297877 | Msa0619990:intron | 25.0% |
| ! | TAATGTAAAAGAAAGGAAGA+TGG | - | chr4_2:71297917-71297936 | Msa0619990:intron | 25.0% |
| !! | GATTTTATGATTCTCAACAA+TGG | + | chr4_2:71298147-71298166 | None:intergenic | 25.0% |
| ! | GTTGAGAATCATAAAATCAT+AGG | - | chr4_2:71298149-71298168 | Msa0619990:intron | 25.0% |
| !! | ATAACATATGTGTATTGATG+AGG | - | chr4_2:71298201-71298220 | Msa0619990:intron | 25.0% |
| ! | ATATTGCATATTATATGCAG+AGG | - | chr4_2:71298313-71298332 | Msa0619990:intron | 25.0% |
| ! | TTACTAGTTAAAGTCATAGA+GGG | + | chr4_2:71298446-71298465 | None:intergenic | 25.0% |
| ! | AAGTTATCTCAAGTTAATCA+AGG | + | chr4_2:71298518-71298537 | None:intergenic | 25.0% |
| !! | TCAATATGGGTTAAAATAGT+TGG | + | chr4_2:71298541-71298560 | None:intergenic | 25.0% |
| !!! | ACTATTTTAACCCATATTGA+TGG | - | chr4_2:71298541-71298560 | Msa0619990:intron | 25.0% |
| !!! | GAGACTTATTTTTGAATTCA+TGG | - | chr4_2:71298590-71298609 | Msa0619990:intron | 25.0% |
| !! | CTTTTGACATATCAGATTAT+CGG | + | chr4_2:71298616-71298635 | None:intergenic | 25.0% |
| ! | ATAATCTGATATGTCAAAAG+TGG | - | chr4_2:71298616-71298635 | Msa0619990:intron | 25.0% |
| !!! | AAAAGGTATTTTTCAGTGAT+TGG | - | chr4_2:71298894-71298913 | Msa0619990:intron | 25.0% |
| ! | CTCACAAATTAAATTTCACA+TGG | + | chr4_2:71299153-71299172 | None:intergenic | 25.0% |
| ! | ATTTAAGCATAACTTCTACT+TGG | + | chr4_2:71299204-71299223 | None:intergenic | 25.0% |
| ! | GAAGTTATGCTTAAATTTGT+TGG | - | chr4_2:71299208-71299227 | Msa0619990:intron | 25.0% |
| !! | AAGAGGATATATTTTACTCT+TGG | - | chr4_2:71299245-71299264 | Msa0619990:intron | 25.0% |
| !! | TTAACAATTTTCTGTGATAC+AGG | - | chr4_2:71299585-71299604 | Msa0619990:intron | 25.0% |
| !!! | AATTTCACGGTTTTATAAAC+TGG | + | chr4_2:71299677-71299696 | None:intergenic | 25.0% |
| ! | AGTTTATAAAACCGTGAAAT+TGG | - | chr4_2:71299676-71299695 | Msa0619990:intron | 25.0% |
| ! | AACTATATATACCTGCAAAA+TGG | + | chr4_2:71299839-71299858 | None:intergenic | 25.0% |
| ! | CACACTTTCATAAAAATGTA+CGG | + | chr4_2:71300005-71300024 | None:intergenic | 25.0% |
| !!! | TTAGTTTTGTTGTCAATGAA+CGG | + | chr4_2:71300041-71300060 | None:intergenic | 25.0% |
| ! | ATCCTTAACATATACCTTAA+GGG | + | chr4_2:71300107-71300126 | None:intergenic | 25.0% |
| ! | AATCCTTAACATATACCTTA+AGG | + | chr4_2:71300108-71300127 | None:intergenic | 25.0% |
| ! | GTACATTAACATGTACTTTA+AGG | - | chr4_2:71300231-71300250 | Msa0619990:intron | 25.0% |
| ! | TTTAATTAGATATCCTGGAT+GGG | + | chr4_2:71300477-71300496 | None:intergenic | 25.0% |
| ! | CTAATTAAACTAATCAACAC+CGG | - | chr4_2:71300488-71300507 | Msa0619990:intron | 25.0% |
| ! | TAATTAAACTAATCAACACC+GGG | - | chr4_2:71300489-71300508 | Msa0619990:intron | 25.0% |
| ! | TTATAGTCTCATTAATTTCC+CGG | + | chr4_2:71300510-71300529 | None:intergenic | 25.0% |
| AGATTTAGCGTATGTAACTA+AGG | - | chr4_2:71294867-71294886 | Msa0619990:three_prime_UTR | 30.0% | |
| GACAATATCTTTGATCCTTA+AGG | - | chr4_2:71295306-71295325 | Msa0619990:intron | 30.0% | |
| !! | CCGACAGAACATTTTTAATT+AGG | - | chr4_2:71295566-71295585 | Msa0619990:CDS | 30.0% |
| AAGAGAGATTAAAATTAGCG+TGG | - | chr4_2:71295795-71295814 | Msa0619990:intron | 30.0% | |
| !! | TATGTTGAAGAGGGTATTAA+AGG | + | chr4_2:71295892-71295911 | None:intergenic | 30.0% |
| TAGTACTAGTATGTTGAAGA+GGG | + | chr4_2:71295901-71295920 | None:intergenic | 30.0% | |
| !!! | TTTTCAATTGAGGGGTATTT+TGG | - | chr4_2:71296264-71296283 | Msa0619990:intron | 30.0% |
| !! | AGTAGATTTGGTGTATTGTT+TGG | + | chr4_2:71296348-71296367 | None:intergenic | 30.0% |
| TGGGAGAAATAAAGTAGATT+TGG | + | chr4_2:71296360-71296379 | None:intergenic | 30.0% | |
| GTATGAGAAGAGAGAATTAT+GGG | + | chr4_2:71296379-71296398 | None:intergenic | 30.0% | |
| AGTATGAGAAGAGAGAATTA+TGG | + | chr4_2:71296380-71296399 | None:intergenic | 30.0% | |
| !!! | CCGTACTTTTTCATTCATTT+AGG | + | chr4_2:71296453-71296472 | None:intergenic | 30.0% |
| !! | CATTTCATTTTTCATTCCCT+TGG | + | chr4_2:71296494-71296513 | None:intergenic | 30.0% |
| GGAATGAAAAATGAAATGCA+GGG | - | chr4_2:71296496-71296515 | Msa0619990:intron | 30.0% | |
| TTAATTGACTAAGATAAGGC+TGG | + | chr4_2:71296605-71296624 | None:intergenic | 30.0% | |
| AGAAGTTGAATATTAAGTGG+TGG | - | chr4_2:71296673-71296692 | Msa0619990:intron | 30.0% | |
| GAGAAAGGCAATTATCAATA+TGG | - | chr4_2:71296799-71296818 | Msa0619990:intron | 30.0% | |
| ATTTGTGGTAAACTATCAAG+AGG | + | chr4_2:71296829-71296848 | None:intergenic | 30.0% | |
| ! | TACTATGGATTGACTATTTG+TGG | + | chr4_2:71296844-71296863 | None:intergenic | 30.0% |
| AAATAGTCAATCCATAGTAG+TGG | - | chr4_2:71296845-71296864 | Msa0619990:intron | 30.0% | |
| !! | AATCCTTTAGAACAAACTCA+TGG | - | chr4_2:71296874-71296893 | Msa0619990:intron | 30.0% |
| ! | AAACCATGAGTTTGTTCTAA+AGG | + | chr4_2:71296880-71296899 | None:intergenic | 30.0% |
| !!! | GTTGAGGGTTTGTTTTAATT+TGG | - | chr4_2:71297101-71297120 | Msa0619990:intron | 30.0% |
| AAAAACAATCTAGTGCAATC+AGG | + | chr4_2:71297261-71297280 | None:intergenic | 30.0% | |
| CCATCTTTCATATATCTATG+GGG | - | chr4_2:71297463-71297482 | Msa0619990:intron | 30.0% | |
| ATATATCTATGGGGAACAAT+GGG | - | chr4_2:71297472-71297491 | Msa0619990:intron | 30.0% | |
| TTACAAGGATAATTTATGGG+AGG | - | chr4_2:71297862-71297881 | Msa0619990:intron | 30.0% | |
| TACAAGGATAATTTATGGGA+GGG | - | chr4_2:71297863-71297882 | Msa0619990:intron | 30.0% | |
| ATGTGAGTGAAAGAAAAAGA+AGG | - | chr4_2:71297889-71297908 | Msa0619990:intron | 30.0% | |
| TGTGAGTGAAAGAAAAAGAA+GGG | - | chr4_2:71297890-71297909 | Msa0619990:intron | 30.0% | |
| GGGGAATTAATGTAAAAGAA+AGG | - | chr4_2:71297910-71297929 | Msa0619990:intron | 30.0% | |
| !!! | TTTTTTGAGGGAAAATGTGT+AGG | + | chr4_2:71298032-71298051 | None:intergenic | 30.0% |
| ! | CTTAAATGACTTAGTATTGG+AGG | + | chr4_2:71298078-71298097 | None:intergenic | 30.0% |
| CCACTTAAATGACTTAGTAT+TGG | + | chr4_2:71298081-71298100 | None:intergenic | 30.0% | |
| CCAATACTAAGTCATTTAAG+TGG | - | chr4_2:71298078-71298097 | Msa0619990:intron | 30.0% | |
| AATCTAGTGTATAGAGAGAT+GGG | + | chr4_2:71298361-71298380 | None:intergenic | 30.0% | |
| TAATCTAGTGTATAGAGAGA+TGG | + | chr4_2:71298362-71298381 | None:intergenic | 30.0% | |
| GTTACTAGTTAAAGTCATAG+AGG | + | chr4_2:71298447-71298466 | None:intergenic | 30.0% | |
| AACTAGTAACCATCTAACTA+TGG | - | chr4_2:71298457-71298476 | Msa0619990:intron | 30.0% | |
| TCAGCAATTAATTCCCATTA+TGG | + | chr4_2:71298704-71298723 | None:intergenic | 30.0% | |
| CTATGCCTATGACATATATT+TGG | - | chr4_2:71299173-71299192 | Msa0619990:intron | 30.0% | |
| !! | TGGCTTTAGTAAATAGTAAG+AGG | - | chr4_2:71299228-71299247 | Msa0619990:intron | 30.0% |
| ! | TATATTTTACTCTTGGTTGC+AGG | - | chr4_2:71299252-71299271 | Msa0619990:intron | 30.0% |
| AGACATTCATTTGTTCCAAA+TGG | - | chr4_2:71299367-71299386 | Msa0619990:intron | 30.0% | |
| GATGAATTCAAACGTATGTA+TGG | - | chr4_2:71299520-71299539 | Msa0619990:intron | 30.0% | |
| CACAGAAAATTGTTAATGAG+TGG | + | chr4_2:71299581-71299600 | None:intergenic | 30.0% | |
| TTCTTGATAAACTATGTGCA+AGG | - | chr4_2:71299622-71299641 | Msa0619990:intron | 30.0% | |
| TGGATCCATAGATTGAAATA+AGG | + | chr4_2:71299657-71299676 | None:intergenic | 30.0% | |
| CAAGATTCTAACCAATTTCA+CGG | + | chr4_2:71299690-71299709 | None:intergenic | 30.0% | |
| CCAAGAAATCAACAATCATA+AGG | + | chr4_2:71299931-71299950 | None:intergenic | 30.0% | |
| !! | CCTTATGATTGTTGATTTCT+TGG | - | chr4_2:71299928-71299947 | Msa0619990:intron | 30.0% |
| ! | CGTACATTTTTATGAAAGTG+TGG | - | chr4_2:71300003-71300022 | Msa0619990:intron | 30.0% |
| !!! | TAGTTTTGTTGTCAATGAAC+GGG | + | chr4_2:71300040-71300059 | None:intergenic | 30.0% |
| TGACAACAAAACTAAGAAGA+AGG | - | chr4_2:71300046-71300065 | Msa0619990:intron | 30.0% | |
| TACCCTTAAGGTATATGTTA+AGG | - | chr4_2:71300102-71300121 | Msa0619990:intron | 30.0% | |
| AGTATTTGTGGAGAACAATA+AGG | - | chr4_2:71300377-71300396 | Msa0619990:intron | 30.0% | |
| TTAATTAGATATCCTGGATG+GGG | + | chr4_2:71300476-71300495 | None:intergenic | 30.0% | |
| GTTTAATTAGATATCCTGGA+TGG | + | chr4_2:71300478-71300497 | None:intergenic | 30.0% | |
| AGTGAAGGGTTGTCATAATA+AGG | - | chr4_2:71294819-71294838 | Msa0619990:three_prime_UTR | 35.0% | |
| GTGAAGGGTTGTCATAATAA+GGG | - | chr4_2:71294820-71294839 | Msa0619990:three_prime_UTR | 35.0% | |
| ! | ATTAGAAGCAAAAGCACAAG+TGG | - | chr4_2:71294891-71294910 | Msa0619990:three_prime_UTR | 35.0% |
| TGGATCTTGTGTTTCAACAA+AGG | + | chr4_2:71294971-71294990 | None:intergenic | 35.0% | |
| GAAGATAATAGGTAGTACCT+TGG | + | chr4_2:71294998-71295017 | None:intergenic | 35.0% | |
| GAAACATGTGAATATAGGTG+AGG | + | chr4_2:71295093-71295112 | None:intergenic | 35.0% | |
| !! | TCATGAAACCTAGTCGTTTT+TGG | - | chr4_2:71295156-71295175 | Msa0619990:CDS | 35.0% |
| TCTATCTACCAAAAACGACT+AGG | + | chr4_2:71295167-71295186 | None:intergenic | 35.0% | |
| TTATGTGTGCGAGTTTCAAA+TGG | + | chr4_2:71295204-71295223 | None:intergenic | 35.0% | |
| !!! | GACATTTTTCTAGTTGAGCT+AGG | - | chr4_2:71295276-71295295 | Msa0619990:intron | 35.0% |
| TACTACCGGAAAAAAACCAA+TGG | - | chr4_2:71295501-71295520 | Msa0619990:CDS | 35.0% | |
| !! | AAATATCACTTTTCGGCCAT+TGG | + | chr4_2:71295520-71295539 | None:intergenic | 35.0% |
| TCTAACAAGTGAAGTATGCA+CGG | - | chr4_2:71295667-71295686 | Msa0619990:intron | 35.0% | |
| AAACAAGGAAGAGAGATTGA+GGG | - | chr4_2:71295713-71295732 | Msa0619990:CDS | 35.0% | |
| GTAGTACTAGTATGTTGAAG+AGG | + | chr4_2:71295902-71295921 | None:intergenic | 35.0% | |
| ! | TCATTCATTTAGGGTGTGTT+TGG | + | chr4_2:71296443-71296462 | None:intergenic | 35.0% |
| GGGAATGAAAAATGAAATGC+AGG | - | chr4_2:71296495-71296514 | Msa0619990:intron | 35.0% | |
| !! | CTCATGCTCAACTATTTTGA+CGG | - | chr4_2:71296756-71296775 | Msa0619990:intron | 35.0% |
| !!! | TCATGCTCAACTATTTTGAC+GGG | - | chr4_2:71296757-71296776 | Msa0619990:intron | 35.0% |
| GTAAAAACACATGGAGAGAA+AGG | - | chr4_2:71296784-71296803 | Msa0619990:intron | 35.0% | |
| GGATTGAAAAACCACTACTA+TGG | + | chr4_2:71296859-71296878 | None:intergenic | 35.0% | |
| TCATCCGATGATATTGTTGA+GGG | - | chr4_2:71297086-71297105 | Msa0619990:intron | 35.0% | |
| CAAACCCTCAACAATATCAT+CGG | + | chr4_2:71297093-71297112 | None:intergenic | 35.0% | |
| ATCAATGGTCTGTATTCAAC+TGG | + | chr4_2:71297155-71297174 | None:intergenic | 35.0% | |
| ! | GATGGTTGGGATTTGAATTT+TGG | - | chr4_2:71297193-71297212 | Msa0619990:intron | 35.0% |
| !! | ATTTTTAGAGAGGGATCTAG+TGG | + | chr4_2:71297385-71297404 | None:intergenic | 35.0% |
| CCCCATAGATATATGAAAGA+TGG | + | chr4_2:71297466-71297485 | None:intergenic | 35.0% | |
| CATATATCTATGGGGAACAA+TGG | - | chr4_2:71297471-71297490 | Msa0619990:intron | 35.0% | |
| ! | TACATTCAACATTTTTCCCC+AGG | + | chr4_2:71297571-71297590 | None:intergenic | 35.0% |
| GTGAGTGAAAGAAAAAGAAG+GGG | - | chr4_2:71297891-71297910 | Msa0619990:intron | 35.0% | |
| GTAAAAGAAAGGAAGATGGT+AGG | - | chr4_2:71297921-71297940 | Msa0619990:intron | 35.0% | |
| CTCTGCTATTAAACCTTCAT+TGG | + | chr4_2:71297949-71297968 | None:intergenic | 35.0% | |
| AAGGTTTAATAGCAGAGAAG+TGG | - | chr4_2:71297952-71297971 | Msa0619990:intron | 35.0% | |
| AGGTTTAATAGCAGAGAAGT+GGG | - | chr4_2:71297953-71297972 | Msa0619990:intron | 35.0% | |
| TCTAAGTGGTGCAAGTTAAA+TGG | - | chr4_2:71298119-71298138 | Msa0619990:intron | 35.0% | |
| CATATTATATGCAGAGGTTG+AGG | - | chr4_2:71298319-71298338 | Msa0619990:intron | 35.0% | |
| ATCTAGTGTATAGAGAGATG+GGG | + | chr4_2:71298360-71298379 | None:intergenic | 35.0% | |
| TAGTAACCATCTAACTATGG+TGG | - | chr4_2:71298460-71298479 | Msa0619990:intron | 35.0% | |
| ACTTAACCACCATAGTTAGA+TGG | + | chr4_2:71298469-71298488 | None:intergenic | 35.0% | |
| !! | AGGTATTTTTCAGTGATTGG+AGG | - | chr4_2:71298897-71298916 | Msa0619990:intron | 35.0% |
| !! | GGTATTTTTCAGTGATTGGA+GGG | - | chr4_2:71298898-71298917 | Msa0619990:intron | 35.0% |
| ! | AAGATTAGTGGTGCTAAGAA+TGG | + | chr4_2:71299098-71299117 | None:intergenic | 35.0% |
| TTCTTAGCACCACTAATCTT+TGG | - | chr4_2:71299098-71299117 | Msa0619990:intron | 35.0% | |
| CCACACCAAATATATGTCAT+AGG | + | chr4_2:71299181-71299200 | None:intergenic | 35.0% | |
| ! | CCTATGACATATATTTGGTG+TGG | - | chr4_2:71299178-71299197 | Msa0619990:intron | 35.0% |
| TGTTCCTCAAGTACTTGAAA+TGG | - | chr4_2:71299344-71299363 | Msa0619990:intron | 35.0% | |
| GATAGAGATATGGAACCATT+TGG | + | chr4_2:71299385-71299404 | None:intergenic | 35.0% | |
| ATGAACCTGTGATAGAGATA+TGG | + | chr4_2:71299395-71299414 | None:intergenic | 35.0% | |
| !!! | TTGATAATGTTTTCCACCGA+AGG | + | chr4_2:71299485-71299504 | None:intergenic | 35.0% |
| TCAAACGTATGTATGGTTTG+TGG | - | chr4_2:71299527-71299546 | Msa0619990:intron | 35.0% | |
| !! | ATTGTTGATTTCTTGGATGC+AGG | - | chr4_2:71299935-71299954 | Msa0619990:intron | 35.0% |
| GATTACTACCCTGAAAGATT+GGG | - | chr4_2:71299957-71299976 | Msa0619990:intron | 35.0% | |
| ATTACTACCCTGAAAGATTG+GGG | - | chr4_2:71299958-71299977 | Msa0619990:intron | 35.0% | |
| TCATAAAAATGTACGGTGCA+TGG | + | chr4_2:71299998-71300017 | None:intergenic | 35.0% | |
| CTAGCTAACTTATACCCTTA+AGG | - | chr4_2:71300090-71300109 | Msa0619990:intron | 35.0% | |
| ATCCTTGCAGATAGTATTTG+TGG | - | chr4_2:71300365-71300384 | Msa0619990:intron | 35.0% | |
| AGTTGTATTTCCAGTAACCA+TGG | - | chr4_2:71300639-71300658 | Msa0619990:CDS | 35.0% | |
| AAGAAGAATTCCATGGTTAC+TGG | + | chr4_2:71300652-71300671 | None:intergenic | 35.0% | |
| GATTGCAAAGAAGAATTCCA+TGG | + | chr4_2:71300659-71300678 | None:intergenic | 35.0% | |
| GGAATTCTTCTTTGCAATCT+CGG | - | chr4_2:71300660-71300679 | Msa0619990:CDS | 35.0% | |
| GGTTGTCATAATAAGGGAAC+AGG | - | chr4_2:71294826-71294845 | Msa0619990:three_prime_UTR | 40.0% | |
| AACACAAGATCCATCTTCCA+AGG | - | chr4_2:71294978-71294997 | Msa0619990:three_prime_UTR | 40.0% | |
| ATAGGTAGTACCTTGGAAGA+TGG | + | chr4_2:71294991-71295010 | None:intergenic | 40.0% | |
| TTGAAACTCGCACACATAAC+TGG | - | chr4_2:71295205-71295224 | Msa0619990:intron | 40.0% | |
| TAGATTGAACACCACGACTT+AGG | + | chr4_2:71295248-71295267 | None:intergenic | 40.0% | |
| !! | CAAGATTCTGGAGTCAAACT+CGG | + | chr4_2:71295443-71295462 | None:intergenic | 40.0% |
| CTCACACTATTGCAAGATTC+TGG | + | chr4_2:71295455-71295474 | None:intergenic | 40.0% | |
| !!! | TTCGGCCATTGGTTTTTTTC+CGG | + | chr4_2:71295509-71295528 | None:intergenic | 40.0% |
| TGTTTGGTACGAGAGAAACA+AGG | - | chr4_2:71295698-71295717 | Msa0619990:intron | 40.0% | |
| GAAACAAGGAAGAGAGATTG+AGG | - | chr4_2:71295712-71295731 | Msa0619990:CDS | 40.0% | |
| AATGTCAAAGTCACCCTGTT+TGG | - | chr4_2:71295755-71295774 | Msa0619990:CDS | 40.0% | |
| GCGAGAAACAAATTCTTGTG+GGG | + | chr4_2:71295822-71295841 | None:intergenic | 40.0% | |
| GGCGAGAAACAAATTCTTGT+GGG | + | chr4_2:71295823-71295842 | None:intergenic | 40.0% | |
| TGGCGAGAAACAAATTCTTG+TGG | + | chr4_2:71295824-71295843 | None:intergenic | 40.0% | |
| ! | TCCTTGTTTCTTGGCATAGT+TGG | + | chr4_2:71295844-71295863 | None:intergenic | 40.0% |
| ACTATGCCAAGAAACAAGGA+TGG | - | chr4_2:71295844-71295863 | Msa0619990:intron | 40.0% | |
| ! | CTATCTCCATCCTTGTTTCT+TGG | + | chr4_2:71295853-71295872 | None:intergenic | 40.0% |
| GAAGTTGTGAAGAGAGAAAG+AGG | + | chr4_2:71296411-71296430 | None:intergenic | 40.0% | |
| ACGGGATGAGTAAAAACACA+TGG | - | chr4_2:71296775-71296794 | Msa0619990:intron | 40.0% | |
| GAAGAGAAGAAGAGAAAACG+AGG | - | chr4_2:71296942-71296961 | Msa0619990:intron | 40.0% | |
| CTCATCCGATGATATTGTTG+AGG | - | chr4_2:71297085-71297104 | Msa0619990:intron | 40.0% | |
| AGTTGGACTCAAACTCTATG+TGG | + | chr4_2:71297128-71297147 | None:intergenic | 40.0% | |
| CATAGAGTTTGAGTCCAACT+TGG | - | chr4_2:71297128-71297147 | Msa0619990:intron | 40.0% | |
| TGTATTCAACTGGTCCAAGT+TGG | + | chr4_2:71297145-71297164 | None:intergenic | 40.0% | |
| CAGTTTGTGAAATAGCTCCT+TGG | - | chr4_2:71297283-71297302 | Msa0619990:intron | 40.0% | |
| GATGTAGTAGGTTGTGATAG+TGG | - | chr4_2:71297831-71297850 | Msa0619990:intron | 40.0% | |
| ATAGTGGCGAAGAGATTACA+AGG | - | chr4_2:71297847-71297866 | Msa0619990:intron | 40.0% | |
| AAGATGGTAGGTACCAATGA+AGG | - | chr4_2:71297933-71297952 | Msa0619990:intron | 40.0% | |
| TTTAATAGCAGAGAAGTGGG+AGG | - | chr4_2:71297956-71297975 | Msa0619990:intron | 40.0% | |
| AGAGAGGAAGAGAAAGAGAT+GGG | - | chr4_2:71297991-71298010 | Msa0619990:intron | 40.0% | |
| GTCATTTAAGTGGTCCAAGT+TGG | - | chr4_2:71298088-71298107 | Msa0619990:intron | 40.0% | |
| !! | CTTAGAGTTTTGGTCCAACT+TGG | + | chr4_2:71298105-71298124 | None:intergenic | 40.0% |
| AGTTGGACCAAAACTCTAAG+TGG | - | chr4_2:71298105-71298124 | Msa0619990:intron | 40.0% | |
| ! | ACTTGCACCACTTAGAGTTT+TGG | + | chr4_2:71298115-71298134 | None:intergenic | 40.0% |
| ACCAAATAGAGCTAAGCACA+CGG | + | chr4_2:71298289-71298308 | None:intergenic | 40.0% | |
| !! | TGTGCTTAGCTCTATTTGGT+AGG | - | chr4_2:71298289-71298308 | Msa0619990:intron | 40.0% |
| !! | GTGCTTAGCTCTATTTGGTA+GGG | - | chr4_2:71298290-71298309 | Msa0619990:intron | 40.0% |
| TGCTGTAGTTAGTACTTGGT+AGG | + | chr4_2:71298645-71298664 | None:intergenic | 40.0% | |
| ATGCTGCTGTAGTTAGTACT+TGG | + | chr4_2:71298649-71298668 | None:intergenic | 40.0% | |
| ! | GATTGGAGGGTGTAATACAT+TGG | - | chr4_2:71298911-71298930 | Msa0619990:intron | 40.0% |
| TAGCTGTTTGTTTAGCTGTC+AGG | - | chr4_2:71299028-71299047 | Msa0619990:intron | 40.0% | |
| AGCTGTTTGTTTAGCTGTCA+GGG | - | chr4_2:71299029-71299048 | Msa0619990:intron | 40.0% | |
| TTTGTTTAGCTGTCAGGGAT+TGG | - | chr4_2:71299034-71299053 | Msa0619990:intron | 40.0% | |
| ACATGACTGCCAAAGATTAG+TGG | + | chr4_2:71299110-71299129 | None:intergenic | 40.0% | |
| TCGTGATTTAGATGTGGAGA+AGG | - | chr4_2:71299312-71299331 | Msa0619990:intron | 40.0% | |
| ! | GTCTCCATTTCAAGTACTTG+AGG | + | chr4_2:71299351-71299370 | None:intergenic | 40.0% |
| TGGTTCCATATCTCTATCAC+AGG | - | chr4_2:71299387-71299406 | Msa0619990:intron | 40.0% | |
| ! | TGGTTTGTGGTAGTTAAGCT+AGG | - | chr4_2:71299540-71299559 | Msa0619990:intron | 40.0% |
| ACAAATTTCTCTTGTCCTGG+TGG | + | chr4_2:71299748-71299767 | None:intergenic | 40.0% | |
| CCAACAAATTTCTCTTGTCC+TGG | + | chr4_2:71299751-71299770 | None:intergenic | 40.0% | |
| CCAGGACAAGAGAAATTTGT+TGG | - | chr4_2:71299748-71299767 | Msa0619990:intron | 40.0% | |
| TGTTGGTATAGCAGAACTCA+AGG | - | chr4_2:71299765-71299784 | Msa0619990:intron | 40.0% | |
| GTTGGTATAGCAGAACTCAA+GGG | - | chr4_2:71299766-71299785 | Msa0619990:intron | 40.0% | |
| TATAGCAGAACTCAAGGGAT+GGG | - | chr4_2:71299771-71299790 | Msa0619990:intron | 40.0% | |
| GGATTACTACCCTGAAAGAT+TGG | - | chr4_2:71299956-71299975 | Msa0619990:intron | 40.0% | |
| ACAACTTCCCCAATCTTTCA+GGG | + | chr4_2:71299968-71299987 | None:intergenic | 40.0% | |
| AACAACTTCCCCAATCTTTC+AGG | + | chr4_2:71299969-71299988 | None:intergenic | 40.0% | |
| CTCCACAAATACTATCTGCA+AGG | + | chr4_2:71300370-71300389 | None:intergenic | 40.0% | |
| AGTCAACTCCCTGAGATATA+TGG | - | chr4_2:71300432-71300451 | Msa0619990:intron | 40.0% | |
| GTTTGCCACCATATATCTCA+GGG | + | chr4_2:71300443-71300462 | None:intergenic | 40.0% | |
| AGTTTGCCACCATATATCTC+AGG | + | chr4_2:71300444-71300463 | None:intergenic | 40.0% | |
| CAACAAAGGCTCTCACAAGA+CGG | + | chr4_2:71294957-71294976 | None:intergenic | 45.0% | |
| TCTAGTTGAGCTAGGACAAG+TGG | - | chr4_2:71295284-71295303 | Msa0619990:intron | 45.0% | |
| CTGGAGTCAAACTCGGATAA+AGG | + | chr4_2:71295436-71295455 | None:intergenic | 45.0% | |
| GTTTCTCTCGTACCAAACAG+AGG | + | chr4_2:71295697-71295716 | None:intergenic | 45.0% | |
| CTTTCTCTCCTCACCAAACA+GGG | + | chr4_2:71295771-71295790 | None:intergenic | 45.0% | |
| TCTTTCTCTCCTCACCAAAC+AGG | + | chr4_2:71295772-71295791 | None:intergenic | 45.0% | |
| ! | TGTTTGGTGAGGAGAGAAAG+AGG | - | chr4_2:71295771-71295790 | Msa0619990:CDS | 45.0% |
| ! | GTTTGGTGAGGAGAGAAAGA+GGG | - | chr4_2:71295772-71295791 | Msa0619990:CDS | 45.0% |
| GCCAACTATGCCAAGAAACA+AGG | - | chr4_2:71295840-71295859 | Msa0619990:intron | 45.0% | |
| CGTGAGTTAACTCACTTAGG+TGG | + | chr4_2:71296711-71296730 | None:intergenic | 45.0% | |
| CAGCGTGAGTTAACTCACTT+AGG | + | chr4_2:71296714-71296733 | None:intergenic | 45.0% | |
| GGAACTTGATGTCCAAGTTG+TGG | - | chr4_2:71297214-71297233 | Msa0619990:intron | 45.0% | |
| TCCAAGTTGTGGCTATGTGA+AGG | - | chr4_2:71297225-71297244 | Msa0619990:intron | 45.0% | |
| ACCTTCACATAGCCACAACT+TGG | + | chr4_2:71297229-71297248 | None:intergenic | 45.0% | |
| AGAGAAGATGGAGGAAAGAG+GGG | + | chr4_2:71297314-71297333 | None:intergenic | 45.0% | |
| GAGAGAAGATGGAGGAAAGA+GGG | + | chr4_2:71297315-71297334 | None:intergenic | 45.0% | |
| AGAGAGAAGATGGAGGAAAG+AGG | + | chr4_2:71297316-71297335 | None:intergenic | 45.0% | |
| ATCCAACGTGAGAGAGAAGA+TGG | + | chr4_2:71297326-71297345 | None:intergenic | 45.0% | |
| TTTAGAGAGGGATCTAGTGG+TGG | + | chr4_2:71297382-71297401 | None:intergenic | 45.0% | |
| ! | CAACCCACTGATTAGAGATC+CGG | - | chr4_2:71297692-71297711 | Msa0619990:intron | 45.0% |
| GAACCGGATCTCTAATCAGT+GGG | + | chr4_2:71297698-71297717 | None:intergenic | 45.0% | |
| TGAACCGGATCTCTAATCAG+TGG | + | chr4_2:71297699-71297718 | None:intergenic | 45.0% | |
| GAGAGAGGAAGAGAAAGAGA+TGG | - | chr4_2:71297990-71298009 | Msa0619990:intron | 45.0% | |
| CCAAATAGAGCTAAGCACAC+GGG | + | chr4_2:71298288-71298307 | None:intergenic | 45.0% | |
| ! | GCTAAGTGCAGAAGTGGATT+TGG | + | chr4_2:71299012-71299031 | None:intergenic | 45.0% |
| CAAACAGCTAAGTGCAGAAG+TGG | + | chr4_2:71299018-71299037 | None:intergenic | 45.0% | |
| ACGAGCTCGTGATTTAGATG+TGG | - | chr4_2:71299306-71299325 | Msa0619990:intron | 45.0% | |
| TAGCCAAATTGCAGACGACA+AGG | - | chr4_2:71299414-71299433 | Msa0619990:intron | 45.0% | |
| CGACCTATACTCATTGCCTT+CGG | - | chr4_2:71299466-71299485 | Msa0619990:intron | 45.0% | |
| GTATAGCAGAACTCAAGGGA+TGG | - | chr4_2:71299770-71299789 | Msa0619990:intron | 45.0% | |
| ATAGCAGAACTCAAGGGATG+GGG | - | chr4_2:71299772-71299791 | Msa0619990:intron | 45.0% | |
| CAACTCCCTGAGATATATGG+TGG | - | chr4_2:71300435-71300454 | Msa0619990:intron | 45.0% | |
| !!! | TTTGATAAAATTTATTTTAA+AGG | - | chr4_2:71296239-71296258 | Msa0619990:CDS | 5.0% |
| !! | ATTTATAATAATTTGATATA+AGG | - | chr4_2:71297780-71297799 | Msa0619990:intron | 5.0% |
| !! | GGCTCTCACAAGACGGATTT+TGG | + | chr4_2:71294950-71294969 | None:intergenic | 50.0% |
| GCACACATAACTGGACGAGT+TGG | - | chr4_2:71295214-71295233 | Msa0619990:intron | 50.0% | |
| TGGAGTTCGAACCTAAGTCG+TGG | - | chr4_2:71295234-71295253 | Msa0619990:intron | 50.0% | |
| ATGCACGGTAAGCCTCTGTT+TGG | - | chr4_2:71295682-71295701 | Msa0619990:intron | 50.0% | |
| ! | CAAAGTCACCCTGTTTGGTG+AGG | - | chr4_2:71295760-71295779 | Msa0619990:CDS | 50.0% |
| GAGCATGAGTTAACTCACGC+AGG | + | chr4_2:71296745-71296764 | None:intergenic | 50.0% | |
| GAGAAGATGGAGGAAAGAGG+GGG | + | chr4_2:71297313-71297332 | None:intergenic | 50.0% | |
| CAACGTGAGAGAGAAGATGG+AGG | + | chr4_2:71297323-71297342 | None:intergenic | 50.0% | |
| CTCCATCTTCTCTCTCACGT+TGG | - | chr4_2:71297321-71297340 | Msa0619990:intron | 50.0% | |
| ACGTCATCTCTCTCTCTTGC+TGG | - | chr4_2:71297543-71297562 | Msa0619990:intron | 50.0% | |
| TCTCTCTCTTGCTGGAACCT+GGG | - | chr4_2:71297551-71297570 | Msa0619990:intron | 50.0% | |
| CGGATCTCTAATCAGTGGGT+TGG | + | chr4_2:71297694-71297713 | None:intergenic | 50.0% | |
| GAGGAAAGAGTGACAGAGAG+AGG | - | chr4_2:71297975-71297994 | Msa0619990:intron | 50.0% | |
| !! | CCCGTGTGCTTAGCTCTATT+TGG | - | chr4_2:71298285-71298304 | Msa0619990:intron | 50.0% |
| AGAGGTTGAGGTTCGAACCT+CGG | - | chr4_2:71298331-71298350 | Msa0619990:intron | 50.0% | |
| ACACTGGCACACTGCCATAA+TGG | - | chr4_2:71298687-71298706 | Msa0619990:intron | 50.0% | |
| CACTGGCACACTGCCATAAT+GGG | - | chr4_2:71298688-71298707 | Msa0619990:intron | 50.0% | |
| ! | AGGCCTTGTCGTCTGCAATT+TGG | + | chr4_2:71299420-71299439 | None:intergenic | 50.0% |
| ACCAATCTTGTCGCGTCCTT+GGG | + | chr4_2:71299446-71299465 | None:intergenic | 50.0% | |
| CCACCGAAGGCAATGAGTAT+AGG | + | chr4_2:71299472-71299491 | None:intergenic | 50.0% | |
| CCTATACTCATTGCCTTCGG+TGG | - | chr4_2:71299469-71299488 | Msa0619990:intron | 50.0% | |
| TGATGTATCAGCATGCCACC+AGG | - | chr4_2:71299730-71299749 | Msa0619990:intron | 50.0% | |
| ACTGCAATTAGTCCCCATCC+AGG | - | chr4_2:71300461-71300480 | Msa0619990:intron | 50.0% | |
| AGAGGGATCTAGTGGTGGTC+TGG | + | chr4_2:71297377-71297396 | None:intergenic | 55.0% | |
| CTCTCTCTCTTGCTGGAACC+TGG | - | chr4_2:71297550-71297569 | Msa0619990:intron | 55.0% | |
| CTCTCTCTTGCTGGAACCTG+GGG | - | chr4_2:71297552-71297571 | Msa0619990:intron | 55.0% | |
| ! | ATAGAGAGATGGGGTGTCCG+AGG | + | chr4_2:71298351-71298370 | None:intergenic | 55.0% |
| TGTGCCAGTGTCTCGGTTAG+CGG | + | chr4_2:71298678-71298697 | None:intergenic | 55.0% | |
| ATGGCAGTGTGCCAGTGTCT+CGG | + | chr4_2:71298685-71298704 | None:intergenic | 55.0% | |
| GACCAATCTTGTCGCGTCCT+TGG | + | chr4_2:71299447-71299466 | None:intergenic | 55.0% | |
| ! | TGGCGCTCTCTCCATTTTGC+AGG | - | chr4_2:71299825-71299844 | Msa0619990:intron | 55.0% |
| AGGAAAGAGGGGGTGAGCCA+AGG | + | chr4_2:71297303-71297322 | None:intergenic | 60.0% | |
| GAAGCCGCTAACCGAGACAC+TGG | - | chr4_2:71298671-71298690 | Msa0619990:intron | 60.0% | |
| GCCCAAGGACGCGACAAGAT+TGG | - | chr4_2:71299442-71299461 | Msa0619990:intron | 60.0% | |
| GACGACAAGGCCTTCGCCCA+AGG | - | chr4_2:71299427-71299446 | Msa0619990:intron | 65.0% | |
| CTTGTCGCGTCCTTGGGCGA+AGG | + | chr4_2:71299440-71299459 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 71294811 | 71300743 | 71294811 | ID=Msa0619990;Name=Msa0619990 |
| chr4_2 | mRNA | 71294811 | 71300743 | 71294811 | ID=Msa0619990-mRNA-1;Parent=Msa0619990;Name=Msa0619990-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|1|0.83|1|1|1|6|252|272 |
| chr4_2 | exon | 71294811 | 71295179 | 71294811 | ID=Msa0619990-mRNA-1:exon:21100;Parent=Msa0619990-mRNA-1 |
| chr4_2 | exon | 71295487 | 71295597 | 71295487 | ID=Msa0619990-mRNA-1:exon:21099;Parent=Msa0619990-mRNA-1 |
| chr4_2 | exon | 71295708 | 71295813 | 71295708 | ID=Msa0619990-mRNA-1:exon:21098;Parent=Msa0619990-mRNA-1 |
| chr4_2 | exon | 71295911 | 71295947 | 71295911 | ID=Msa0619990-mRNA-1:exon:21097;Parent=Msa0619990-mRNA-1 |
| chr4_2 | exon | 71296022 | 71296280 | 71296022 | ID=Msa0619990-mRNA-1:exon:21096;Parent=Msa0619990-mRNA-1 |
| chr4_2 | exon | 71300555 | 71300743 | 71300555 | ID=Msa0619990-mRNA-1:exon:21095;Parent=Msa0619990-mRNA-1 |
| chr4_2 | CDS | 71300555 | 71300743 | 71300555 | ID=Msa0619990-mRNA-1:cds;Parent=Msa0619990-mRNA-1 |
| chr4_2 | CDS | 71296022 | 71296280 | 71296022 | ID=Msa0619990-mRNA-1:cds;Parent=Msa0619990-mRNA-1 |
| chr4_2 | CDS | 71295911 | 71295947 | 71295911 | ID=Msa0619990-mRNA-1:cds;Parent=Msa0619990-mRNA-1 |
| chr4_2 | CDS | 71295708 | 71295813 | 71295708 | ID=Msa0619990-mRNA-1:cds;Parent=Msa0619990-mRNA-1 |
| chr4_2 | CDS | 71295487 | 71295597 | 71295487 | ID=Msa0619990-mRNA-1:cds;Parent=Msa0619990-mRNA-1 |
| chr4_2 | CDS | 71295063 | 71295179 | 71295063 | ID=Msa0619990-mRNA-1:cds;Parent=Msa0619990-mRNA-1 |
| chr4_2 | three_prime_UTR | 71294811 | 71295062 | 71294811 | ID=Msa0619990-mRNA-1:three_prime_utr;Parent=Msa0619990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
