Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1217940 | XP_003609698.1 | 92.982 | 114 | 7 | 1 | 1 | 113 | 1 | 114 | 1.56e-62 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1217940 | sp|Q9FH22|FLZ15_ARATH | 62.264 | 53 | 20 | 0 | 56 | 108 | 63 | 115 | 4.19e-20 | 82.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1217940 | G7JLK0 | 92.982 | 114 | 7 | 1 | 1 | 113 | 1 | 114 | 7.46e-63 | 196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa1217940 | 0.825485 | 4.569740e-54 | -8.615850e-47 |
| Msa0004920 | Msa1217940 | 0.820439 | 6.857098e-53 | -8.615850e-47 |
| Msa0008410 | Msa1217940 | 0.808863 | 2.512347e-50 | -8.615850e-47 |
| Msa0017510 | Msa1217940 | 0.808248 | 3.399784e-50 | -8.615850e-47 |
| Msa0036430 | Msa1217940 | 0.840715 | 7.359481e-58 | -8.615850e-47 |
| Msa0044020 | Msa1217940 | 0.812465 | 4.183326e-51 | -8.615850e-47 |
| Msa0051770 | Msa1217940 | 0.806915 | 6.523762e-50 | -8.615850e-47 |
| Msa0051790 | Msa1217940 | 0.805942 | 1.046386e-49 | -8.615850e-47 |
| Msa0057140 | Msa1217940 | 0.800614 | 1.326710e-48 | -8.615850e-47 |
| Msa0072370 | Msa1217940 | 0.806074 | 9.816227e-50 | -8.615850e-47 |
| Msa0076000 | Msa1217940 | 0.800210 | 1.603518e-48 | -8.615850e-47 |
| Msa0078430 | Msa1217940 | 0.816884 | 4.393749e-52 | -8.615850e-47 |
| Msa0084500 | Msa1217940 | 0.820373 | 7.097874e-53 | -8.615850e-47 |
| Msa0095540 | Msa1217940 | 0.815016 | 1.147221e-51 | -8.615850e-47 |
| Msa0096000 | Msa1217940 | 0.800928 | 1.144783e-48 | -8.615850e-47 |
| Msa0097990 | Msa1217940 | 0.814575 | 1.437121e-51 | -8.615850e-47 |
| Msa0611380 | Msa1217940 | 0.860215 | 2.412596e-63 | -8.615850e-47 |
| Msa0619070 | Msa1217940 | 0.827523 | 1.492938e-54 | -8.615850e-47 |
| Msa0619990 | Msa1217940 | 0.815451 | 9.181185e-52 | -8.615850e-47 |
| Msa0628640 | Msa1217940 | 0.873210 | 1.754345e-67 | -8.615850e-47 |
| Msa0631120 | Msa1217940 | 0.886814 | 2.464085e-72 | -8.615850e-47 |
| Msa0643220 | Msa1217940 | 0.803062 | 4.169971e-49 | -8.615850e-47 |
| Msa0650070 | Msa1217940 | 0.823119 | 1.644195e-53 | -8.615850e-47 |
| Msa0666030 | Msa1217940 | 0.850529 | 1.600649e-60 | -8.615850e-47 |
| Msa0669340 | Msa1217940 | 0.897341 | 1.543909e-76 | -8.615850e-47 |
| Msa0684500 | Msa1217940 | 0.863097 | 3.174872e-64 | -8.615850e-47 |
| Msa0692060 | Msa1217940 | 0.821525 | 3.855962e-53 | -8.615850e-47 |
| Msa0703230 | Msa1217940 | 0.801936 | 7.117132e-49 | -8.615850e-47 |
| Msa0706420 | Msa1217940 | 0.826229 | 3.042196e-54 | -8.615850e-47 |
| Msa0708520 | Msa1217940 | 0.811138 | 8.134897e-51 | -8.615850e-47 |
| Msa0709500 | Msa1217940 | 0.820927 | 5.295083e-53 | -8.615850e-47 |
| Msa0716450 | Msa1217940 | 0.844369 | 7.888627e-59 | -8.615850e-47 |
| Msa0717260 | Msa1217940 | 0.856879 | 2.387359e-62 | -8.615850e-47 |
| Msa0734230 | Msa1217940 | 0.802063 | 6.699920e-49 | -8.615850e-47 |
| Msa0739120 | Msa1217940 | 0.805857 | 1.090123e-49 | -8.615850e-47 |
| Msa0741900 | Msa1217940 | 0.835917 | 1.269204e-56 | -8.615850e-47 |
| Msa0750880 | Msa1217940 | 0.800442 | 1.438546e-48 | -8.615850e-47 |
| Msa0754720 | Msa1217940 | -0.807452 | 5.020458e-50 | -8.615850e-47 |
| Msa0756630 | Msa1217940 | -0.805306 | 1.422357e-49 | -8.615850e-47 |
| Msa0758320 | Msa1217940 | 0.848608 | 5.499019e-60 | -8.615850e-47 |
| Msa0766810 | Msa1217940 | 0.800303 | 1.535216e-48 | -8.615850e-47 |
| Msa0775440 | Msa1217940 | 0.827943 | 1.183049e-54 | -8.615850e-47 |
| Msa0790390 | Msa1217940 | -0.802442 | 5.599287e-49 | -8.615850e-47 |
| Msa0790850 | Msa1217940 | 0.825370 | 4.864360e-54 | -8.615850e-47 |
| Msa0799030 | Msa1217940 | 0.838931 | 2.144189e-57 | -8.615850e-47 |
| Msa0799700 | Msa1217940 | 0.827100 | 1.884588e-54 | -8.615850e-47 |
| Msa0804680 | Msa1217940 | 0.809850 | 1.543131e-50 | -8.615850e-47 |
| Msa0810020 | Msa1217940 | 0.845447 | 4.038736e-59 | -8.615850e-47 |
| Msa0812820 | Msa1217940 | 0.865510 | 5.603797e-65 | -8.615850e-47 |
| Msa0822990 | Msa1217940 | 0.825368 | 4.869186e-54 | -8.615850e-47 |
| Msa0824660 | Msa1217940 | 0.804640 | 1.960895e-49 | -8.615850e-47 |
| Msa0829620 | Msa1217940 | 0.809369 | 1.958030e-50 | -8.615850e-47 |
| Msa0837440 | Msa1217940 | 0.857426 | 1.646159e-62 | -8.615850e-47 |
| Msa0837980 | Msa1217940 | 0.848948 | 4.425060e-60 | -8.615850e-47 |
| Msa0130570 | Msa1217940 | 0.825025 | 5.868075e-54 | -8.615850e-47 |
| Msa0141100 | Msa1217940 | 0.867541 | 1.268121e-65 | -8.615850e-47 |
| Msa0141340 | Msa1217940 | 0.804158 | 2.470893e-49 | -8.615850e-47 |
| Msa0153420 | Msa1217940 | 0.817976 | 2.493294e-52 | -8.615850e-47 |
| Msa0157290 | Msa1217940 | 0.808195 | 3.490145e-50 | -8.615850e-47 |
| Msa0173990 | Msa1217940 | 0.822033 | 2.941315e-53 | -8.615850e-47 |
| Msa0176470 | Msa1217940 | 0.803727 | 3.037048e-49 | -8.615850e-47 |
| Msa0183750 | Msa1217940 | 0.800640 | 1.310707e-48 | -8.615850e-47 |
| Msa0188680 | Msa1217940 | -0.808988 | 2.362376e-50 | -8.615850e-47 |
| Msa0191040 | Msa1217940 | 0.870858 | 1.061689e-66 | -8.615850e-47 |
| Msa0191250 | Msa1217940 | 0.807333 | 5.319665e-50 | -8.615850e-47 |
| Msa0197930 | Msa1217940 | 0.804209 | 2.411375e-49 | -8.615850e-47 |
| Msa0205850 | Msa1217940 | 0.802392 | 5.733526e-49 | -8.615850e-47 |
| Msa0206800 | Msa1217940 | 0.806604 | 7.587225e-50 | -8.615850e-47 |
| Msa0220300 | Msa1217940 | 0.833575 | 4.928687e-56 | -8.615850e-47 |
| Msa0225600 | Msa1217940 | 0.828684 | 7.839093e-55 | -8.615850e-47 |
| Msa0227400 | Msa1217940 | 0.810245 | 1.268510e-50 | -8.615850e-47 |
| Msa0233340 | Msa1217940 | 0.870684 | 1.211410e-66 | -8.615850e-47 |
| Msa0236110 | Msa1217940 | 0.803135 | 4.027024e-49 | -8.615850e-47 |
| Msa0236440 | Msa1217940 | 0.851169 | 1.057411e-60 | -8.615850e-47 |
| Msa0369440 | Msa1217940 | 0.805052 | 1.607735e-49 | -8.615850e-47 |
| Msa0372660 | Msa1217940 | 0.809783 | 1.594997e-50 | -8.615850e-47 |
| Msa0374850 | Msa1217940 | 0.864049 | 1.607726e-64 | -8.615850e-47 |
| Msa0375090 | Msa1217940 | 0.880950 | 3.595773e-70 | -8.615850e-47 |
| Msa0470340 | Msa1217940 | 0.871382 | 7.129312e-67 | -8.615850e-47 |
| Msa0470860 | Msa1217940 | 0.823395 | 1.417401e-53 | -8.615850e-47 |
| Msa0473080 | Msa1217940 | 0.806278 | 8.888911e-50 | -8.615850e-47 |
| Msa0480950 | Msa1217940 | 0.855268 | 7.070919e-62 | -8.615850e-47 |
| Msa0481110 | Msa1217940 | 0.959375 | 2.259646e-117 | -8.615850e-47 |
| Msa0981010 | Msa1217940 | 0.817096 | 3.937503e-52 | -8.615850e-47 |
| Msa1002620 | Msa1217940 | 0.845939 | 2.969891e-59 | -8.615850e-47 |
| Msa1010110 | Msa1217940 | 0.818430 | 1.968374e-52 | -8.615850e-47 |
| Msa1013400 | Msa1217940 | 0.809613 | 1.734963e-50 | -8.615850e-47 |
| Msa1014420 | Msa1217940 | 0.816571 | 5.164005e-52 | -8.615850e-47 |
| Msa1033560 | Msa1217940 | 0.846679 | 1.867083e-59 | -8.615850e-47 |
| Msa1040400 | Msa1217940 | 0.800581 | 1.347597e-48 | -8.615850e-47 |
| Msa1042670 | Msa1217940 | 0.800929 | 1.144382e-48 | -8.615850e-47 |
| Msa1083150 | Msa1217940 | 0.802124 | 6.509817e-49 | -8.615850e-47 |
| Msa1093530 | Msa1217940 | 0.804955 | 1.685179e-49 | -8.615850e-47 |
| Msa0243100 | Msa1217940 | 0.800468 | 1.420873e-48 | -8.615850e-47 |
| Msa0251240 | Msa1217940 | 0.847218 | 1.329246e-59 | -8.615850e-47 |
| Msa0264930 | Msa1217940 | 0.820540 | 6.498197e-53 | -8.615850e-47 |
| Msa0266450 | Msa1217940 | 0.835490 | 1.627638e-56 | -8.615850e-47 |
| Msa0270220 | Msa1217940 | -0.810745 | 9.895219e-51 | -8.615850e-47 |
| Msa0271810 | Msa1217940 | 0.811965 | 5.377470e-51 | -8.615850e-47 |
| Msa0287650 | Msa1217940 | 0.824857 | 6.431835e-54 | -8.615850e-47 |
| Msa0288190 | Msa1217940 | 0.812534 | 4.039916e-51 | -8.615850e-47 |
| Msa0301200 | Msa1217940 | 0.801656 | 8.124996e-49 | -8.615850e-47 |
| Msa0307830 | Msa1217940 | -0.810035 | 1.407857e-50 | -8.615850e-47 |
| Msa0311690 | Msa1217940 | 0.851436 | 8.885444e-61 | -8.615850e-47 |
| Msa0311860 | Msa1217940 | 0.808945 | 2.412802e-50 | -8.615850e-47 |
| Msa0326540 | Msa1217940 | 0.826847 | 2.166444e-54 | -8.615850e-47 |
| Msa0333920 | Msa1217940 | 0.808308 | 3.300974e-50 | -8.615850e-47 |
| Msa1113850 | Msa1217940 | 0.839194 | 1.832913e-57 | -8.615850e-47 |
| Msa1125760 | Msa1217940 | 0.826269 | 2.975505e-54 | -8.615850e-47 |
| Msa1127890 | Msa1217940 | 0.827706 | 1.349314e-54 | -8.615850e-47 |
| Msa1133710 | Msa1217940 | 0.802985 | 4.326932e-49 | -8.615850e-47 |
| Msa1139810 | Msa1217940 | 0.800504 | 1.397490e-48 | -8.615850e-47 |
| Msa1140690 | Msa1217940 | 0.831875 | 1.302278e-55 | -8.615850e-47 |
| Msa1145250 | Msa1217940 | -0.807525 | 4.843795e-50 | -8.615850e-47 |
| Msa1160400 | Msa1217940 | 0.850203 | 1.976518e-60 | -8.615850e-47 |
| Msa1171360 | Msa1217940 | 0.820260 | 7.535977e-53 | -8.615850e-47 |
| Msa1172670 | Msa1217940 | 0.829032 | 6.459174e-55 | -8.615850e-47 |
| Msa1179460 | Msa1217940 | 0.807670 | 4.512183e-50 | -8.615850e-47 |
| Msa1187840 | Msa1217940 | 0.812812 | 3.511561e-51 | -8.615850e-47 |
| Msa1197590 | Msa1217940 | 0.824392 | 8.275025e-54 | -8.615850e-47 |
| Msa1203000 | Msa1217940 | 0.840335 | 9.250275e-58 | -8.615850e-47 |
| Msa1214880 | Msa1217940 | 0.817300 | 3.542598e-52 | -8.615850e-47 |
| Msa1214890 | Msa1217940 | 0.838247 | 3.220159e-57 | -8.615850e-47 |
| Msa1217860 | Msa1217940 | 0.802619 | 5.147552e-49 | -8.615850e-47 |
| Msa1217940 | Msa1218480 | 0.851860 | 6.739157e-61 | -8.615850e-47 |
| Msa1217940 | Msa1218600 | 0.826447 | 2.699493e-54 | -8.615850e-47 |
| Msa1217940 | Msa1219260 | 0.864508 | 1.156429e-64 | -8.615850e-47 |
| Msa1217940 | Msa1227970 | 0.800929 | 1.144250e-48 | -8.615850e-47 |
| Msa1217940 | Msa1240310 | 0.806689 | 7.280554e-50 | -8.615850e-47 |
| Msa1217940 | Msa1254700 | 0.816313 | 5.897801e-52 | -8.615850e-47 |
| Msa1217940 | Msa1254710 | 0.813090 | 3.052482e-51 | -8.615850e-47 |
| Msa1217940 | Msa1255040 | -0.832066 | 1.168196e-55 | -8.615850e-47 |
| Msa1217940 | Msa1255280 | 0.838241 | 3.231750e-57 | -8.615850e-47 |
| Msa1217940 | Msa1258050 | 0.847872 | 8.784010e-60 | -8.615850e-47 |
| Msa1217940 | Msa1266960 | 0.858821 | 6.332125e-63 | -8.615850e-47 |
| Msa1217940 | Msa1283170 | 0.802457 | 5.560742e-49 | -8.615850e-47 |
| Msa1217940 | Msa1291870 | 0.813506 | 2.472528e-51 | -8.615850e-47 |
| Msa1217940 | Msa1300870 | 0.817004 | 4.127807e-52 | -8.615850e-47 |
| Msa1217940 | Msa1303250 | 0.802406 | 5.695374e-49 | -8.615850e-47 |
| Msa1217940 | Msa1308380 | 0.801185 | 1.014242e-48 | -8.615850e-47 |
| Msa1217940 | Msa1320740 | 0.811360 | 7.277627e-51 | -8.615850e-47 |
| Msa1217940 | Msa1331910 | 0.842352 | 2.724859e-58 | -8.615850e-47 |
| Msa1217940 | Msa1331920 | 0.821777 | 3.371828e-53 | -8.615850e-47 |
| Msa1217940 | Msa1339940 | 0.811214 | 7.831281e-51 | -8.615850e-47 |
| Msa1217940 | Msa1342430 | 0.812579 | 3.949381e-51 | -8.615850e-47 |
| Msa1217940 | Msa1345420 | 0.801730 | 7.844510e-49 | -8.615850e-47 |
| Msa1217940 | Msa1353060 | 0.801954 | 7.056328e-49 | -8.615850e-47 |
| Msa1217940 | Msa1356440 | 0.805240 | 1.468829e-49 | -8.615850e-47 |
| Msa1217940 | Msa1369700 | 0.818197 | 2.222190e-52 | -8.615850e-47 |
| Msa1217940 | Msa1385670 | 0.839811 | 1.267432e-57 | -8.615850e-47 |
| Msa1217940 | Msa1395870 | 0.855817 | 4.889069e-62 | -8.615850e-47 |
| Msa1217940 | Msa1397250 | 0.824737 | 6.863335e-54 | -8.615850e-47 |
| Msa1217940 | Msa1399560 | 0.864663 | 1.033704e-64 | -8.615850e-47 |
| Msa1217940 | Msa1401150 | 0.846720 | 1.819468e-59 | -8.615850e-47 |
| Msa1217940 | Msa1403580 | -0.804838 | 1.782435e-49 | -8.615850e-47 |
| Msa1217940 | Msa1424450 | 0.803288 | 3.744523e-49 | -8.615850e-47 |
| Msa1217940 | Msa1425010 | 0.805615 | 1.225720e-49 | -8.615850e-47 |
| Msa1217940 | Msa1427060 | 0.806567 | 7.725335e-50 | -8.615850e-47 |
| Msa1217940 | Msa1437190 | 0.806729 | 7.142423e-50 | -8.615850e-47 |
| Msa1217940 | Msa1439960 | 0.808946 | 2.411895e-50 | -8.615850e-47 |
| Msa1217940 | Msa1440340 | 0.832459 | 9.342473e-56 | -8.615850e-47 |
| Msa1217940 | Msa1442590 | 0.808817 | 2.570052e-50 | -8.615850e-47 |
| Msa1217940 | Msa1443290 | -0.803934 | 2.750779e-49 | -8.615850e-47 |
| Msa1217940 | Msa1443840 | 0.822684 | 2.076875e-53 | -8.615850e-47 |
| Msa1217940 | Msa1452060 | 0.807780 | 4.275585e-50 | -8.615850e-47 |
| Msa1217940 | Msa1460380 | 0.835093 | 2.050769e-56 | -8.615850e-47 |
| Msa1217940 | Msa1460890 | 0.845234 | 4.612870e-59 | -8.615850e-47 |
| Msa1217940 | Msa1461280 | 0.800778 | 1.228367e-48 | -8.615850e-47 |
| Msa1217940 | Msa1463670 | 0.831627 | 1.499617e-55 | -8.615850e-47 |
| Msa0484780 | Msa1217940 | 0.816681 | 4.877927e-52 | -8.615850e-47 |
| Msa0490480 | Msa1217940 | 0.802716 | 4.917207e-49 | -8.615850e-47 |
| Msa0521540 | Msa1217940 | 0.810735 | 9.940907e-51 | -8.615850e-47 |
| Msa0531430 | Msa1217940 | 0.854809 | 9.608199e-62 | -8.615850e-47 |
| Msa0532710 | Msa1217940 | 0.804750 | 1.859117e-49 | -8.615850e-47 |
| Msa0534570 | Msa1217940 | 0.850755 | 1.383019e-60 | -8.615850e-47 |
| Msa0534590 | Msa1217940 | 0.903988 | 1.962632e-79 | -8.615850e-47 |
| Msa0548620 | Msa1217940 | 0.802671 | 5.021677e-49 | -8.615850e-47 |
| Msa0558810 | Msa1217940 | 0.812030 | 5.203368e-51 | -8.615850e-47 |
| Msa0558840 | Msa1217940 | 0.828460 | 8.883102e-55 | -8.615850e-47 |
| Msa0568820 | Msa1217940 | 0.830375 | 3.042861e-55 | -8.615850e-47 |
| Msa0577220 | Msa1217940 | 0.802897 | 4.511190e-49 | -8.615850e-47 |
| Msa0590800 | Msa1217940 | 0.896097 | 5.115663e-76 | -8.615850e-47 |
| Msa0853320 | Msa1217940 | 0.857795 | 1.279207e-62 | -8.615850e-47 |
| Msa0862100 | Msa1217940 | 0.812427 | 4.263691e-51 | -8.615850e-47 |
| Msa0867890 | Msa1217940 | 0.802140 | 6.460728e-49 | -8.615850e-47 |
| Msa0869100 | Msa1217940 | 0.805917 | 1.058703e-49 | -8.615850e-47 |
| Msa0876200 | Msa1217940 | 0.810697 | 1.013339e-50 | -8.615850e-47 |
| Msa0880140 | Msa1217940 | 0.810291 | 1.240074e-50 | -8.615850e-47 |
| Msa0880710 | Msa1217940 | 0.835542 | 1.579331e-56 | -8.615850e-47 |
| Msa0885060 | Msa1217940 | 0.808609 | 2.847434e-50 | -8.615850e-47 |
| Msa0902760 | Msa1217940 | 0.809184 | 2.144672e-50 | -8.615850e-47 |
| Msa0908170 | Msa1217940 | 0.800741 | 1.249907e-48 | -8.615850e-47 |
| Msa0933230 | Msa1217940 | 0.809380 | 1.947143e-50 | -8.615850e-47 |
| Msa0933310 | Msa1217940 | 0.813230 | 2.843192e-51 | -8.615850e-47 |
| Msa0970030 | Msa1217940 | 0.806257 | 8.979168e-50 | -8.615850e-47 |
| Msa0971090 | Msa1217940 | 0.804784 | 1.829016e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1217940 | MtrunA17_Chr4g0067541 | 92.982 | 114 | 7 | 1 | 1 | 113 | 1 | 114 | 1.44e-66 | 196 |
| Msa1217940 | MtrunA17_Chr2g0295651 | 60.684 | 117 | 33 | 3 | 1 | 109 | 1 | 112 | 4.06e-38 | 125 |
| Msa1217940 | MtrunA17_Chr3g0115551 | 46.970 | 66 | 31 | 1 | 38 | 103 | 71 | 132 | 4.95e-15 | 66.6 |
| Msa1217940 | MtrunA17_Chr8g0344991 | 40.541 | 74 | 36 | 1 | 36 | 101 | 6 | 79 | 5.09e-13 | 60.8 |
| Msa1217940 | MtrunA17_Chr4g0070221 | 52.083 | 48 | 22 | 1 | 56 | 103 | 173 | 219 | 7.13e-12 | 59.7 |
| Msa1217940 | MtrunA17_Chr3g0124361 | 38.889 | 72 | 41 | 1 | 35 | 103 | 95 | 166 | 2.76e-11 | 57.8 |
| Msa1217940 | MtrunA17_Chr3g0138651 | 53.191 | 47 | 22 | 0 | 56 | 102 | 349 | 395 | 7.18e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1217940 | AT5G49120.1 | 62.264 | 53 | 20 | 0 | 56 | 108 | 63 | 115 | 4.25e-21 | 82.4 |
| Msa1217940 | AT1G22160.1 | 48.276 | 58 | 30 | 0 | 53 | 110 | 70 | 127 | 3.21e-14 | 64.7 |
| Msa1217940 | AT4G39795.1 | 42.029 | 69 | 39 | 1 | 33 | 101 | 46 | 113 | 4.21e-13 | 61.2 |
| Msa1217940 | AT1G78020.1 | 53.488 | 43 | 20 | 0 | 61 | 103 | 89 | 131 | 8.75e-13 | 61.2 |
| Msa1217940 | AT5G47060.2 | 56.000 | 50 | 21 | 1 | 61 | 110 | 97 | 145 | 7.38e-12 | 59.3 |
| Msa1217940 | AT5G47060.1 | 56.000 | 50 | 21 | 1 | 61 | 110 | 97 | 145 | 7.38e-12 | 59.3 |
| Msa1217940 | AT4G17670.1 | 52.000 | 50 | 23 | 1 | 61 | 110 | 76 | 124 | 9.18e-11 | 55.8 |
Find 19 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTAAACCATGGGTAAAAC+TGG | 0.321231 | 8_1:+80483517 | None:intergenic |
| AGAAAAGTTGAAACCTTAAA+AGG | 0.340742 | 8_1:+80483983 | None:intergenic |
| AACCTTAAAAGGAGAATGAT+AGG | 0.405313 | 8_1:+80483994 | None:intergenic |
| CACTGGAAATGTTGGGGTGG+GGG | 0.412454 | 8_1:-80483574 | Msa1217940:three_prime_UTR |
| TGCAGCAAGAAGCTCTTACC+TGG | 0.449852 | 8_1:-80483944 | Msa1217940:CDS |
| AGTAGTGACACTGGAAATGT+TGG | 0.487421 | 8_1:-80483582 | Msa1217940:exon |
| AAAGGAGAATGATAGGAAAG+TGG | 0.494802 | 8_1:+80484001 | None:intergenic |
| CCTACAATCCACGCTACAAA+AGG | 0.495514 | 8_1:+80483663 | None:intergenic |
| ACACTGGAAATGTTGGGGTG+GGG | 0.537070 | 8_1:-80483575 | Msa1217940:three_prime_UTR |
| ATCAGAGAATGAAATATGGT+TGG | 0.543247 | 8_1:-80484160 | Msa1217940:exon |
| GAATGAAATATGGTTGGTCT+TGG | 0.548398 | 8_1:-80484154 | Msa1217940:exon |
| GACACTGGAAATGTTGGGGT+GGG | 0.558364 | 8_1:-80483576 | Msa1217940:three_prime_UTR |
| TCTTGCTGCATAGAAAGCAT+TGG | 0.559666 | 8_1:+80483957 | None:intergenic |
| GTTGATTGTGCTAAGCATCA+TGG | 0.561835 | 8_1:+80484039 | None:intergenic |
| GTAGTGACACTGGAAATGTT+GGG | 0.588242 | 8_1:-80483581 | Msa1217940:exon |
| TACATGTAGATATCTTTCCC+AGG | 0.593576 | 8_1:+80483926 | None:intergenic |
| GCAGCAAGAAGCTCTTACCT+GGG | 0.606797 | 8_1:-80483943 | Msa1217940:CDS |
| TGACACTGGAAATGTTGGGG+TGG | 0.614413 | 8_1:-80483577 | Msa1217940:three_prime_UTR |
| TAGTGACACTGGAAATGTTG+GGG | 0.702637 | 8_1:-80483580 | Msa1217940:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTGCTA+TGG | - | chr8_1:80484173-80484192 | Msa1217940:five_prime_UTR | 10.0% |
| !! | AAAAATCAGAGAATGAAATA+TGG | - | chr8_1:80483557-80483576 | Msa1217940:three_prime_UTR | 20.0% |
| !!! | ATATTACTCTTTTTCTTATG+TGG | + | chr8_1:80483615-80483634 | None:intergenic | 20.0% |
| !!! | CTTTTAATTTTATCTCCTAT+AGG | - | chr8_1:80483878-80483897 | Msa1217940:intron | 20.0% |
| !!! | ATGCATTTTTTTTTTCTTCT+TGG | - | chr8_1:80483917-80483936 | Msa1217940:intron | 20.0% |
| !!! | GAATTTTGTATTAGTATATG+TGG | - | chr8_1:80483986-80484005 | Msa1217940:CDS | 20.0% |
| !!! | GAGTTATTTTTTTGTCTTAA+TGG | - | chr8_1:80484008-80484027 | Msa1217940:CDS | 20.0% |
| ! | AGAAAAGTTGAAACCTTAAA+AGG | + | chr8_1:80483741-80483760 | None:intergenic | 25.0% |
| ! | GTAAGATCTATATATCCTAT+AGG | + | chr8_1:80483896-80483915 | None:intergenic | 25.0% |
| ! | CAATTAACATCAAAAGATCT+GGG | + | chr8_1:80483967-80483986 | None:intergenic | 25.0% |
| ! | TCAATTAACATCAAAAGATC+TGG | + | chr8_1:80483968-80483987 | None:intergenic | 25.0% |
| ! | TCTGATTTTTCTTTCTGTTG+TGG | + | chr8_1:80483547-80483566 | None:intergenic | 30.0% |
| ATCAGAGAATGAAATATGGT+TGG | - | chr8_1:80483561-80483580 | Msa1217940:three_prime_UTR | 30.0% | |
| ! | TTCCTATCATTCTCCTTTTA+AGG | - | chr8_1:80483725-80483744 | Msa1217940:intron | 30.0% |
| AACCTTAAAAGGAGAATGAT+AGG | + | chr8_1:80483730-80483749 | None:intergenic | 30.0% | |
| ! | AATGCATGCTACACTTATTT+TGG | + | chr8_1:80483838-80483857 | None:intergenic | 30.0% |
| !!! | ATCTGGGTATTTTTTCTGTA+AGG | + | chr8_1:80483951-80483970 | None:intergenic | 30.0% |
| !! | GAATGAAATATGGTTGGTCT+TGG | - | chr8_1:80483567-80483586 | Msa1217940:three_prime_UTR | 35.0% |
| AAAGGAGAATGATAGGAAAG+TGG | + | chr8_1:80483723-80483742 | None:intergenic | 35.0% | |
| TACATGTAGATATCTTTCCC+AGG | + | chr8_1:80483798-80483817 | None:intergenic | 35.0% | |
| TACATGTACAAGTGAGTTCT+CGG | - | chr8_1:80483810-80483829 | Msa1217940:intron | 35.0% | |
| !! | TAGGTGCAAGCATATTTTAG+CGG | - | chr8_1:80484077-80484096 | Msa1217940:CDS | 35.0% |
| !! | TTTTTGAAGAGTAGTGACAC+TGG | - | chr8_1:80484130-80484149 | Msa1217940:CDS | 35.0% |
| GTTGATTGTGCTAAGCATCA+TGG | + | chr8_1:80483685-80483704 | None:intergenic | 40.0% | |
| ! | TCTTGCTGCATAGAAAGCAT+TGG | + | chr8_1:80483767-80483786 | None:intergenic | 40.0% |
| ATGGCACCTATTTATTGCAG+AGG | - | chr8_1:80484027-80484046 | Msa1217940:CDS | 40.0% | |
| CTGTCTCCTCTGCAATAAAT+AGG | + | chr8_1:80484036-80484055 | None:intergenic | 40.0% | |
| AGTAGTGACACTGGAAATGT+TGG | - | chr8_1:80484139-80484158 | Msa1217940:CDS | 40.0% | |
| GTAGTGACACTGGAAATGTT+GGG | - | chr8_1:80484140-80484159 | Msa1217940:CDS | 40.0% | |
| TAGTGACACTGGAAATGTTG+GGG | - | chr8_1:80484141-80484160 | Msa1217940:CDS | 40.0% | |
| CCTACAATCCACGCTACAAA+AGG | + | chr8_1:80484061-80484080 | None:intergenic | 45.0% | |
| !! | CCTTTTGTAGCGTGGATTGT+AGG | - | chr8_1:80484058-80484077 | Msa1217940:CDS | 45.0% |
| !!! | CAAGCATATTTTAGCGGACG+AGG | - | chr8_1:80484083-80484102 | Msa1217940:CDS | 45.0% |
| !!! | TATTTTAGCGGACGAGGAAG+AGG | - | chr8_1:80484089-80484108 | Msa1217940:CDS | 45.0% |
| TGCAGCAAGAAGCTCTTACC+TGG | - | chr8_1:80483777-80483796 | Msa1217940:intron | 50.0% | |
| GCAGCAAGAAGCTCTTACCT+GGG | - | chr8_1:80483778-80483797 | Msa1217940:intron | 50.0% | |
| ! | AGACAGAGCCTTTTGTAGCG+TGG | - | chr8_1:80484050-80484069 | Msa1217940:CDS | 50.0% |
| TGACACTGGAAATGTTGGGG+TGG | - | chr8_1:80484144-80484163 | Msa1217940:CDS | 50.0% | |
| GACACTGGAAATGTTGGGGT+GGG | - | chr8_1:80484145-80484164 | Msa1217940:CDS | 50.0% | |
| ACACTGGAAATGTTGGGGTG+GGG | - | chr8_1:80484146-80484165 | Msa1217940:CDS | 50.0% | |
| CACTGGAAATGTTGGGGTGG+GGG | - | chr8_1:80484147-80484166 | Msa1217940:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 80483530 | 80484213 | 80483530 | ID=Msa1217940;Name=Msa1217940 |
| chr8_1 | mRNA | 80483530 | 80484213 | 80483530 | ID=Msa1217940-mRNA-1;Parent=Msa1217940;Name=Msa1217940-mRNA-1;_AED=0.00;_eAED=0.00;_QI=46|1|1|1|1|1|2|70|113 |
| chr8_1 | exon | 80483530 | 80483696 | 80483530 | ID=Msa1217940-mRNA-1:exon:28195;Parent=Msa1217940-mRNA-1 |
| chr8_1 | exon | 80483923 | 80484213 | 80483923 | ID=Msa1217940-mRNA-1:exon:28194;Parent=Msa1217940-mRNA-1 |
| chr8_1 | five_prime_UTR | 80484168 | 80484213 | 80484168 | ID=Msa1217940-mRNA-1:five_prime_utr;Parent=Msa1217940-mRNA-1 |
| chr8_1 | CDS | 80483923 | 80484167 | 80483923 | ID=Msa1217940-mRNA-1:cds;Parent=Msa1217940-mRNA-1 |
| chr8_1 | CDS | 80483600 | 80483696 | 80483600 | ID=Msa1217940-mRNA-1:cds;Parent=Msa1217940-mRNA-1 |
| chr8_1 | three_prime_UTR | 80483530 | 80483599 | 80483530 | ID=Msa1217940-mRNA-1:three_prime_utr;Parent=Msa1217940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
