Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621010 | XP_003591266.1 | 97.213 | 610 | 13 | 1 | 1 | 610 | 1 | 606 | 0.0 | 1220 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621010 | sp|Q93VV5|PTR16_ARATH | 41.519 | 566 | 309 | 11 | 5 | 553 | 23 | 583 | 7.46e-145 | 435 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0621010 | 0.805828 | 1.105646e-49 | -8.615850e-47 |
| Msa0034270 | Msa0621010 | 0.800570 | 1.354918e-48 | -8.615850e-47 |
| Msa0036830 | Msa0621010 | 0.966777 | 2.242050e-126 | -8.615850e-47 |
| Msa0081050 | Msa0621010 | 0.935486 | 7.859759e-97 | -8.615850e-47 |
| Msa0110970 | Msa0621010 | 0.804906 | 1.724897e-49 | -8.615850e-47 |
| Msa0120400 | Msa0621010 | 0.805627 | 1.218711e-49 | -8.615850e-47 |
| Msa0621010 | Msa0626450 | 0.828441 | 8.976219e-55 | -8.615850e-47 |
| Msa0621010 | Msa0626490 | 0.827335 | 1.656056e-54 | -8.615850e-47 |
| Msa0621010 | Msa0626510 | 0.813721 | 2.217305e-51 | -8.615850e-47 |
| Msa0621010 | Msa0637560 | 0.803788 | 2.949152e-49 | -8.615850e-47 |
| Msa0621010 | Msa0663300 | 0.807367 | 5.233614e-50 | -8.615850e-47 |
| Msa0621010 | Msa0664060 | 0.809288 | 2.037820e-50 | -8.615850e-47 |
| Msa0621010 | Msa0664600 | 0.825347 | 4.926485e-54 | -8.615850e-47 |
| Msa0621010 | Msa0712270 | 0.809086 | 2.251616e-50 | -8.615850e-47 |
| Msa0621010 | Msa0769180 | 0.800717 | 1.264467e-48 | -8.615850e-47 |
| Msa0621010 | Msa0861510 | 0.814528 | 1.471526e-51 | -8.615850e-47 |
| Msa0621010 | Msa0861600 | 0.815900 | 7.292537e-52 | -8.615850e-47 |
| Msa0621010 | Msa0880140 | 0.803001 | 4.292902e-49 | -8.615850e-47 |
| Msa0621010 | Msa0909120 | 0.800295 | 1.541032e-48 | -8.615850e-47 |
| Msa0621010 | Msa0909140 | 0.810318 | 1.223266e-50 | -8.615850e-47 |
| Msa0621010 | Msa0936410 | 0.805253 | 1.459377e-49 | -8.615850e-47 |
| Msa0621010 | Msa0967870 | 0.808033 | 3.777735e-50 | -8.615850e-47 |
| Msa0621010 | Msa1007270 | 0.812540 | 4.027152e-51 | -8.615850e-47 |
| Msa0621010 | Msa1018690 | 0.803363 | 3.612989e-49 | -8.615850e-47 |
| Msa0621010 | Msa1045140 | 0.816296 | 5.949242e-52 | -8.615850e-47 |
| Msa0621010 | Msa1048920 | 0.816274 | 6.016389e-52 | -8.615850e-47 |
| Msa0621010 | Msa1151910 | 0.805480 | 1.307889e-49 | -8.615850e-47 |
| Msa0621010 | Msa1223470 | 0.824170 | 9.329740e-54 | -8.615850e-47 |
| Msa0621010 | Msa1271990 | 0.814946 | 1.189150e-51 | -8.615850e-47 |
| Msa0621010 | Msa1297230 | 0.801292 | 9.647386e-49 | -8.615850e-47 |
| Msa0621010 | Msa1440960 | 0.824367 | 8.385799e-54 | -8.615850e-47 |
| Msa0124280 | Msa0621010 | 0.801957 | 7.046114e-49 | -8.615850e-47 |
| Msa0131900 | Msa0621010 | 0.927120 | 1.827841e-91 | -8.615850e-47 |
| Msa0136650 | Msa0621010 | 0.805343 | 1.397491e-49 | -8.615850e-47 |
| Msa0157290 | Msa0621010 | 0.806657 | 7.395503e-50 | -8.615850e-47 |
| Msa0197100 | Msa0621010 | 0.802383 | 5.759546e-49 | -8.615850e-47 |
| Msa0221290 | Msa0621010 | 0.820692 | 5.996930e-53 | -8.615850e-47 |
| Msa0225100 | Msa0621010 | 0.802795 | 4.734459e-49 | -8.615850e-47 |
| Msa0378720 | Msa0621010 | 0.807383 | 5.193006e-50 | -8.615850e-47 |
| Msa0380620 | Msa0621010 | 0.825377 | 4.846001e-54 | -8.615850e-47 |
| Msa0392510 | Msa0621010 | 0.800104 | 1.685652e-48 | -8.615850e-47 |
| Msa0410650 | Msa0621010 | 0.801501 | 8.738273e-49 | -8.615850e-47 |
| Msa0417880 | Msa0621010 | 0.801052 | 1.080098e-48 | -8.615850e-47 |
| Msa0422850 | Msa0621010 | 0.805028 | 1.627044e-49 | -8.615850e-47 |
| Msa0422930 | Msa0621010 | 0.806281 | 8.875547e-50 | -8.615850e-47 |
| Msa0430260 | Msa0621010 | 0.817718 | 2.850873e-52 | -8.615850e-47 |
| Msa0467430 | Msa0621010 | 0.806033 | 1.001195e-49 | -8.615850e-47 |
| Msa0474730 | Msa0621010 | 0.801158 | 1.027270e-48 | -8.615850e-47 |
| Msa0239030 | Msa0621010 | 0.802373 | 5.786689e-49 | -8.615850e-47 |
| Msa0261340 | Msa0621010 | 0.829426 | 5.183219e-55 | -8.615850e-47 |
| Msa0276740 | Msa0621010 | 0.801226 | 9.950361e-49 | -8.615850e-47 |
| Msa0287740 | Msa0621010 | 0.812093 | 5.042150e-51 | -8.615850e-47 |
| Msa0292400 | Msa0621010 | 0.801259 | 9.794997e-49 | -8.615850e-47 |
| Msa0297740 | Msa0621010 | 0.816956 | 4.231455e-52 | -8.615850e-47 |
| Msa0316680 | Msa0621010 | 0.809462 | 1.869697e-50 | -8.615850e-47 |
| Msa0337700 | Msa0621010 | 0.808869 | 2.505397e-50 | -8.615850e-47 |
| Msa0507680 | Msa0621010 | 0.813923 | 2.001840e-51 | -8.615850e-47 |
| Msa0527860 | Msa0621010 | 0.811230 | 7.767566e-51 | -8.615850e-47 |
| Msa0535040 | Msa0621010 | 0.816405 | 5.625610e-52 | -8.615850e-47 |
| Msa0574890 | Msa0621010 | 0.807447 | 5.031677e-50 | -8.615850e-47 |
| Msa0591790 | Msa0621010 | 0.816309 | 5.908847e-52 | -8.615850e-47 |
| Msa0597790 | Msa0621010 | 0.821774 | 3.376018e-53 | -8.615850e-47 |
| Msa0600930 | Msa0621010 | 0.809001 | 2.347464e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621010 | MtrunA17_Chr1g0193391 | 97.213 | 610 | 13 | 1 | 1 | 610 | 1 | 606 | 0.0 | 1220 |
| Msa0621010 | MtrunA17_Chr7g0271221 | 81.597 | 576 | 103 | 3 | 1 | 575 | 1 | 574 | 0.0 | 973 |
| Msa0621010 | MtrunA17_Chr4g0069581 | 58.969 | 524 | 211 | 2 | 35 | 555 | 4 | 526 | 0.0 | 598 |
| Msa0621010 | MtrunA17_Chr3g0133341 | 47.461 | 571 | 263 | 8 | 11 | 564 | 10 | 560 | 0.0 | 541 |
| Msa0621010 | MtrunA17_Chr2g0284701 | 44.093 | 601 | 287 | 12 | 3 | 560 | 8 | 602 | 2.50e-165 | 485 |
| Msa0621010 | MtrunA17_Chr8g0379971 | 42.979 | 584 | 283 | 10 | 14 | 548 | 11 | 593 | 2.66e-148 | 441 |
| Msa0621010 | MtrunA17_Chr8g0379991 | 44.286 | 560 | 255 | 9 | 45 | 548 | 8 | 566 | 1.75e-142 | 425 |
| Msa0621010 | MtrunA17_Chr2g0276751 | 39.138 | 557 | 317 | 9 | 2 | 546 | 17 | 563 | 1.91e-140 | 421 |
| Msa0621010 | MtrunA17_Chr5g0415961 | 40.395 | 557 | 297 | 9 | 17 | 546 | 24 | 572 | 4.51e-140 | 419 |
| Msa0621010 | MtrunA17_Chr8g0362711 | 40.323 | 558 | 295 | 7 | 17 | 546 | 24 | 571 | 1.36e-136 | 410 |
| Msa0621010 | MtrunA17_Chr3g0142101 | 37.843 | 547 | 326 | 7 | 17 | 555 | 35 | 575 | 5.63e-128 | 388 |
| Msa0621010 | MtrunA17_Chr3g0142091 | 38.378 | 555 | 325 | 8 | 17 | 559 | 26 | 575 | 1.43e-125 | 382 |
| Msa0621010 | MtrunA17_Chr4g0005901 | 37.615 | 545 | 320 | 9 | 17 | 546 | 32 | 571 | 7.72e-121 | 370 |
| Msa0621010 | MtrunA17_Chr7g0241741 | 36.832 | 543 | 327 | 6 | 17 | 546 | 22 | 561 | 3.23e-120 | 368 |
| Msa0621010 | MtrunA17_Chr7g0214731 | 36.577 | 555 | 326 | 8 | 19 | 549 | 63 | 615 | 1.62e-116 | 360 |
| Msa0621010 | MtrunA17_Chr5g0422881 | 37.522 | 573 | 327 | 13 | 17 | 564 | 20 | 586 | 3.18e-116 | 358 |
| Msa0621010 | MtrunA17_Chr3g0104011 | 35.714 | 546 | 331 | 8 | 17 | 546 | 22 | 563 | 5.76e-116 | 357 |
| Msa0621010 | MtrunA17_Chr7g0240381 | 35.926 | 540 | 326 | 8 | 17 | 546 | 29 | 558 | 1.02e-115 | 357 |
| Msa0621010 | MtrunA17_Chr8g0375291 | 35.326 | 552 | 336 | 7 | 2 | 537 | 27 | 573 | 2.74e-115 | 355 |
| Msa0621010 | MtrunA17_Chr8g0375311 | 34.046 | 561 | 349 | 9 | 2 | 546 | 27 | 582 | 1.53e-113 | 351 |
| Msa0621010 | MtrunA17_Chr4g0008651 | 36.197 | 547 | 331 | 9 | 17 | 551 | 34 | 574 | 7.63e-112 | 347 |
| Msa0621010 | MtrunA17_Chr5g0399071 | 36.475 | 573 | 324 | 13 | 17 | 563 | 25 | 583 | 8.11e-112 | 347 |
| Msa0621010 | MtrunA17_Chr8g0375361 | 34.225 | 561 | 346 | 8 | 2 | 546 | 28 | 581 | 5.02e-111 | 345 |
| Msa0621010 | MtrunA17_Chr7g0261811 | 34.441 | 572 | 344 | 9 | 3 | 554 | 15 | 575 | 6.54e-110 | 342 |
| Msa0621010 | MtrunA17_Chr5g0399061 | 35.979 | 567 | 327 | 14 | 17 | 557 | 27 | 583 | 1.70e-109 | 340 |
| Msa0621010 | MtrunA17_Chr3g0112671 | 34.066 | 546 | 344 | 8 | 9 | 547 | 25 | 561 | 1.82e-108 | 338 |
| Msa0621010 | MtrunA17_Chr7g0261881 | 32.517 | 572 | 355 | 9 | 3 | 554 | 15 | 575 | 2.59e-107 | 335 |
| Msa0621010 | MtrunA17_Chr7g0261791 | 33.217 | 575 | 352 | 9 | 3 | 556 | 17 | 580 | 8.38e-105 | 329 |
| Msa0621010 | MtrunA17_Chr7g0261771 | 33.275 | 571 | 348 | 11 | 3 | 552 | 19 | 577 | 8.75e-105 | 329 |
| Msa0621010 | MtrunA17_Chr5g0439381 | 35.548 | 557 | 335 | 9 | 17 | 561 | 28 | 572 | 1.86e-104 | 328 |
| Msa0621010 | MtrunA17_Chr4g0056431 | 36.252 | 571 | 331 | 11 | 17 | 563 | 25 | 586 | 1.93e-104 | 328 |
| Msa0621010 | MtrunA17_Chr8g0375321 | 32.799 | 561 | 356 | 8 | 2 | 546 | 24 | 579 | 9.44e-104 | 325 |
| Msa0621010 | MtrunA17_Chr3g0114501 | 34.982 | 566 | 342 | 10 | 3 | 551 | 10 | 566 | 4.47e-103 | 324 |
| Msa0621010 | MtrunA17_Chr8g0375341 | 32.442 | 561 | 358 | 7 | 2 | 546 | 27 | 582 | 8.91e-103 | 323 |
| Msa0621010 | MtrunA17_Chr1g0166791 | 31.504 | 565 | 366 | 9 | 3 | 552 | 12 | 570 | 3.18e-102 | 322 |
| Msa0621010 | MtrunA17_Chr1g0213711 | 33.702 | 543 | 337 | 11 | 17 | 544 | 21 | 555 | 3.84e-102 | 322 |
| Msa0621010 | MtrunA17_Chr8g0375351 | 32.258 | 558 | 357 | 7 | 3 | 544 | 28 | 580 | 7.74e-102 | 321 |
| Msa0621010 | MtrunA17_Chr1g0187241 | 31.379 | 580 | 371 | 10 | 3 | 563 | 14 | 585 | 1.24e-101 | 320 |
| Msa0621010 | MtrunA17_Chr3g0112611 | 33.449 | 577 | 351 | 9 | 9 | 559 | 24 | 593 | 4.97e-101 | 319 |
| Msa0621010 | MtrunA17_Chr8g0375331 | 31.903 | 536 | 344 | 7 | 2 | 521 | 11 | 541 | 3.39e-100 | 316 |
| Msa0621010 | MtrunA17_Chr7g0255621 | 32.558 | 602 | 363 | 15 | 4 | 577 | 12 | 598 | 1.40e-98 | 313 |
| Msa0621010 | MtrunA17_Chr7g0261851 | 32.925 | 571 | 358 | 8 | 3 | 556 | 16 | 578 | 3.47e-98 | 311 |
| Msa0621010 | MtrunA17_Chr4g0063591 | 36.514 | 545 | 324 | 9 | 17 | 546 | 22 | 559 | 4.30e-98 | 311 |
| Msa0621010 | MtrunA17_Chr1g0166711 | 32.522 | 575 | 364 | 10 | 3 | 560 | 13 | 580 | 1.95e-97 | 310 |
| Msa0621010 | MtrunA17_Chr7g0255611 | 32.988 | 579 | 342 | 17 | 1 | 546 | 9 | 574 | 6.31e-97 | 308 |
| Msa0621010 | MtrunA17_Chr5g0400371 | 32.740 | 562 | 353 | 9 | 3 | 544 | 100 | 656 | 2.65e-96 | 309 |
| Msa0621010 | MtrunA17_Chr7g0217461 | 31.952 | 579 | 368 | 8 | 3 | 560 | 12 | 585 | 1.34e-95 | 305 |
| Msa0621010 | MtrunA17_Chr7g0214461 | 33.031 | 551 | 346 | 11 | 18 | 552 | 79 | 622 | 5.75e-95 | 304 |
| Msa0621010 | MtrunA17_Chr7g0255601 | 31.379 | 631 | 373 | 16 | 1 | 608 | 13 | 606 | 8.86e-94 | 300 |
| Msa0621010 | MtrunA17_Chr4g0054891 | 31.771 | 576 | 360 | 10 | 3 | 553 | 98 | 665 | 2.60e-93 | 301 |
| Msa0621010 | MtrunA17_Chr7g0261661 | 33.925 | 507 | 296 | 9 | 105 | 591 | 1 | 488 | 1.94e-92 | 293 |
| Msa0621010 | MtrunA17_Chr4g0059971 | 33.333 | 549 | 339 | 10 | 22 | 546 | 39 | 584 | 3.11e-92 | 296 |
| Msa0621010 | MtrunA17_Chr7g0218851 | 32.044 | 543 | 346 | 11 | 18 | 544 | 47 | 582 | 1.96e-91 | 294 |
| Msa0621010 | MtrunA17_Chr5g0415791 | 33.048 | 584 | 361 | 12 | 17 | 576 | 29 | 606 | 2.85e-91 | 294 |
| Msa0621010 | MtrunA17_Chr1g0166771 | 31.693 | 508 | 333 | 7 | 31 | 529 | 5 | 507 | 6.79e-90 | 288 |
| Msa0621010 | MtrunA17_Chr1g0166741 | 30.616 | 552 | 369 | 7 | 17 | 559 | 27 | 573 | 1.53e-89 | 288 |
| Msa0621010 | MtrunA17_Chr4g0011471 | 33.581 | 539 | 334 | 10 | 26 | 544 | 23 | 557 | 1.86e-89 | 288 |
| Msa0621010 | MtrunA17_Chr4g0059991 | 31.655 | 556 | 350 | 11 | 22 | 551 | 27 | 578 | 7.66e-88 | 285 |
| Msa0621010 | MtrunA17_Chr8g0353031 | 29.965 | 574 | 360 | 10 | 1 | 551 | 1 | 555 | 5.54e-85 | 276 |
| Msa0621010 | MtrunA17_Chr4g0059981 | 31.810 | 569 | 356 | 12 | 22 | 563 | 36 | 599 | 4.72e-84 | 275 |
| Msa0621010 | MtrunA17_Chr4g0014781 | 31.618 | 544 | 345 | 10 | 17 | 550 | 29 | 555 | 1.16e-83 | 272 |
| Msa0621010 | MtrunA17_Chr4g0014791 | 31.769 | 554 | 347 | 10 | 3 | 546 | 17 | 549 | 3.24e-83 | 271 |
| Msa0621010 | MtrunA17_Chr4g0014871 | 31.227 | 554 | 353 | 12 | 3 | 546 | 18 | 553 | 5.01e-83 | 271 |
| Msa0621010 | MtrunA17_Chr4g0014841 | 30.505 | 554 | 354 | 11 | 3 | 546 | 17 | 549 | 6.23e-82 | 268 |
| Msa0621010 | MtrunA17_Chr1g0166731 | 33.839 | 461 | 285 | 8 | 107 | 552 | 12 | 467 | 3.11e-81 | 263 |
| Msa0621010 | MtrunA17_Chr4g0014801 | 31.004 | 558 | 356 | 11 | 3 | 550 | 17 | 555 | 3.45e-81 | 266 |
| Msa0621010 | MtrunA17_Chr3g0077151 | 31.532 | 555 | 342 | 13 | 3 | 546 | 16 | 543 | 5.02e-81 | 265 |
| Msa0621010 | MtrunA17_Chr4g0060071 | 46.237 | 279 | 137 | 4 | 279 | 551 | 32 | 303 | 1.37e-80 | 256 |
| Msa0621010 | MtrunA17_Chr8g0390331 | 30.373 | 563 | 367 | 11 | 8 | 552 | 6 | 561 | 5.00e-80 | 263 |
| Msa0621010 | MtrunA17_Chr4g0060001 | 30.508 | 590 | 376 | 12 | 18 | 586 | 30 | 606 | 6.32e-80 | 264 |
| Msa0621010 | MtrunA17_Chr8g0362801 | 34.194 | 465 | 279 | 10 | 105 | 546 | 1 | 461 | 7.48e-79 | 257 |
| Msa0621010 | MtrunA17_Chr4g0011041 | 29.286 | 560 | 374 | 9 | 3 | 544 | 24 | 579 | 2.74e-78 | 259 |
| Msa0621010 | MtrunA17_Chr2g0331481 | 28.459 | 636 | 415 | 13 | 3 | 607 | 11 | 637 | 2.99e-77 | 258 |
| Msa0621010 | MtrunA17_Chr2g0331471 | 28.365 | 624 | 407 | 13 | 15 | 607 | 86 | 700 | 4.01e-77 | 259 |
| Msa0621010 | MtrunA17_Chr3g0082631 | 34.521 | 449 | 263 | 9 | 135 | 558 | 30 | 472 | 1.20e-76 | 251 |
| Msa0621010 | MtrunA17_Chr7g0234381 | 35.730 | 445 | 252 | 8 | 104 | 543 | 3 | 418 | 2.97e-76 | 249 |
| Msa0621010 | MtrunA17_Chr7g0234181 | 35.973 | 442 | 249 | 9 | 107 | 543 | 1 | 413 | 7.65e-76 | 247 |
| Msa0621010 | MtrunA17_Chr7g0240271 | 27.757 | 544 | 370 | 10 | 17 | 540 | 24 | 564 | 8.30e-76 | 253 |
| Msa0621010 | MtrunA17_Chr4g0003761 | 28.369 | 564 | 374 | 14 | 19 | 561 | 32 | 586 | 1.14e-75 | 252 |
| Msa0621010 | MtrunA17_Chr8g0362781 | 27.986 | 561 | 366 | 10 | 17 | 547 | 30 | 582 | 1.36e-74 | 249 |
| Msa0621010 | MtrunA17_Chr7g0234151 | 34.978 | 446 | 254 | 10 | 104 | 543 | 3 | 418 | 1.06e-73 | 242 |
| Msa0621010 | MtrunA17_Chr2g0331511 | 29.617 | 574 | 369 | 12 | 15 | 560 | 19 | 585 | 1.52e-73 | 248 |
| Msa0621010 | MtrunA17_Chr4g0014861 | 34.043 | 423 | 260 | 9 | 134 | 546 | 15 | 428 | 5.14e-73 | 241 |
| Msa0621010 | MtrunA17_Chr1g0157601 | 29.130 | 563 | 366 | 15 | 3 | 543 | 2 | 553 | 3.53e-72 | 242 |
| Msa0621010 | MtrunA17_Chr1g0147631 | 29.661 | 590 | 357 | 15 | 17 | 582 | 25 | 580 | 5.15e-72 | 242 |
| Msa0621010 | MtrunA17_Chr1g0157611 | 29.688 | 576 | 367 | 15 | 6 | 556 | 5 | 567 | 1.24e-71 | 241 |
| Msa0621010 | MtrunA17_Chr7g0240281 | 29.038 | 551 | 362 | 11 | 17 | 543 | 24 | 569 | 5.89e-70 | 237 |
| Msa0621010 | MtrunA17_Chr1g0177591 | 29.630 | 540 | 351 | 14 | 15 | 542 | 40 | 562 | 1.68e-68 | 233 |
| Msa0621010 | MtrunA17_Chr7g0261751 | 28.842 | 475 | 280 | 8 | 3 | 427 | 19 | 485 | 4.55e-68 | 230 |
| Msa0621010 | MtrunA17_Chr7g0235521 | 29.204 | 452 | 299 | 8 | 108 | 540 | 4 | 453 | 2.41e-66 | 224 |
| Msa0621010 | MtrunA17_Chr7g0240131 | 29.204 | 452 | 299 | 8 | 108 | 540 | 4 | 453 | 1.31e-65 | 222 |
| Msa0621010 | MtrunA17_Chr7g0240181 | 29.204 | 452 | 299 | 8 | 108 | 540 | 4 | 453 | 1.34e-65 | 222 |
| Msa0621010 | MtrunA17_Chr7g0240211 | 29.204 | 452 | 299 | 8 | 108 | 540 | 4 | 453 | 2.14e-65 | 222 |
| Msa0621010 | MtrunA17_Chr2g0331521 | 26.712 | 584 | 389 | 17 | 17 | 577 | 22 | 589 | 6.00e-63 | 218 |
| Msa0621010 | MtrunA17_Chr2g0331461 | 28.271 | 619 | 394 | 16 | 3 | 588 | 11 | 612 | 3.81e-62 | 217 |
| Msa0621010 | MtrunA17_Chr3g0142121 | 41.219 | 279 | 154 | 5 | 284 | 561 | 11 | 280 | 3.12e-60 | 202 |
| Msa0621010 | MtrunA17_Chr1g0157621 | 26.978 | 556 | 373 | 14 | 35 | 569 | 1 | 544 | 2.36e-58 | 205 |
| Msa0621010 | MtrunA17_Chr7g0240151 | 27.876 | 452 | 287 | 9 | 108 | 540 | 4 | 435 | 2.53e-58 | 202 |
| Msa0621010 | MtrunA17_Chr1g0177611 | 31.667 | 420 | 263 | 12 | 135 | 542 | 26 | 433 | 2.90e-58 | 202 |
| Msa0621010 | MtrunA17_Chr5g0415841 | 29.336 | 467 | 299 | 10 | 105 | 547 | 1 | 460 | 1.34e-56 | 198 |
| Msa0621010 | MtrunA17_Chr1g0177631 | 31.579 | 418 | 266 | 11 | 135 | 542 | 26 | 433 | 2.47e-56 | 196 |
| Msa0621010 | MtrunA17_Chr3g0112631 | 36.364 | 275 | 161 | 5 | 283 | 547 | 3 | 273 | 4.02e-56 | 191 |
| Msa0621010 | MtrunA17_Chr7g0261731 | 30.814 | 344 | 217 | 5 | 3 | 333 | 19 | 354 | 1.59e-55 | 192 |
| Msa0621010 | MtrunA17_Chr3g0142111 | 34.397 | 282 | 178 | 3 | 17 | 291 | 46 | 327 | 3.83e-54 | 187 |
| Msa0621010 | MtrunA17_Chr2g0326211 | 25.887 | 564 | 371 | 14 | 4 | 546 | 10 | 547 | 3.25e-53 | 191 |
| Msa0621010 | MtrunA17_Chr2g0325951 | 26.560 | 561 | 371 | 12 | 4 | 546 | 10 | 547 | 2.16e-52 | 188 |
| Msa0621010 | MtrunA17_Chr6g0451841 | 26.655 | 559 | 364 | 11 | 17 | 551 | 5 | 541 | 4.06e-51 | 184 |
| Msa0621010 | MtrunA17_Chr2g0325961 | 26.012 | 519 | 348 | 11 | 46 | 546 | 48 | 548 | 1.43e-50 | 183 |
| Msa0621010 | MtrunA17_Chr7g0261721 | 40.394 | 203 | 110 | 5 | 353 | 548 | 5 | 203 | 5.51e-37 | 137 |
| Msa0621010 | MtrunA17_Chr1g0147591 | 32.308 | 195 | 119 | 4 | 142 | 326 | 9 | 200 | 1.55e-26 | 107 |
| Msa0621010 | MtrunA17_Chr3g0112651 | 30.653 | 199 | 131 | 4 | 91 | 284 | 7 | 203 | 2.34e-25 | 104 |
| Msa0621010 | MtrunA17_Chr7g0261831 | 37.500 | 152 | 86 | 4 | 242 | 387 | 1 | 149 | 7.77e-25 | 102 |
| Msa0621010 | MtrunA17_Chr4g0060061 | 38.983 | 118 | 72 | 0 | 128 | 245 | 11 | 128 | 7.16e-23 | 94.7 |
| Msa0621010 | MtrunA17_Chr4g0060051 | 36.264 | 91 | 56 | 1 | 11 | 101 | 18 | 106 | 1.91e-15 | 73.2 |
| Msa0621010 | MtrunA17_Chr2g0326221 | 26.222 | 225 | 139 | 6 | 323 | 546 | 25 | 223 | 2.79e-15 | 75.5 |
| Msa0621010 | MtrunA17_Chr7g0234371 | 43.210 | 81 | 43 | 2 | 27 | 104 | 1 | 81 | 1.06e-12 | 63.9 |
| Msa0621010 | MtrunA17_Chr7g0234141 | 43.210 | 81 | 43 | 2 | 27 | 104 | 1 | 81 | 1.06e-12 | 63.9 |
| Msa0621010 | MtrunA17_Chr7g0234171 | 46.774 | 62 | 33 | 0 | 43 | 104 | 16 | 77 | 2.46e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621010 | AT1G59740.1 | 41.519 | 566 | 309 | 11 | 5 | 553 | 23 | 583 | 7.58e-146 | 435 |
| Msa0621010 | AT1G69850.1 | 39.719 | 569 | 304 | 8 | 17 | 552 | 23 | 585 | 4.54e-141 | 422 |
| Msa0621010 | AT1G33440.1 | 41.336 | 554 | 312 | 7 | 19 | 563 | 38 | 587 | 2.38e-138 | 416 |
| Msa0621010 | AT1G27040.2 | 39.234 | 548 | 312 | 6 | 17 | 550 | 21 | 561 | 1.82e-133 | 402 |
| Msa0621010 | AT1G27040.1 | 39.234 | 548 | 312 | 6 | 17 | 550 | 25 | 565 | 2.25e-133 | 402 |
| Msa0621010 | AT1G27040.3 | 39.811 | 530 | 298 | 6 | 35 | 550 | 11 | 533 | 5.24e-130 | 392 |
| Msa0621010 | AT5G62730.1 | 37.300 | 563 | 295 | 7 | 17 | 549 | 54 | 588 | 1.98e-124 | 380 |
| Msa0621010 | AT5G62730.2 | 37.477 | 555 | 289 | 7 | 25 | 549 | 3 | 529 | 8.71e-123 | 374 |
| Msa0621010 | AT3G25280.1 | 39.394 | 528 | 290 | 10 | 19 | 543 | 21 | 521 | 1.74e-121 | 370 |
| Msa0621010 | AT3G54140.1 | 35.963 | 545 | 331 | 7 | 17 | 546 | 22 | 563 | 1.32e-120 | 369 |
| Msa0621010 | AT3G54140.2 | 35.963 | 545 | 331 | 7 | 17 | 546 | 22 | 563 | 1.32e-120 | 369 |
| Msa0621010 | AT5G01180.2 | 35.229 | 545 | 334 | 7 | 17 | 546 | 23 | 563 | 6.18e-118 | 362 |
| Msa0621010 | AT5G01180.3 | 35.229 | 545 | 334 | 7 | 17 | 546 | 23 | 563 | 6.18e-118 | 362 |
| Msa0621010 | AT5G01180.1 | 35.229 | 545 | 334 | 7 | 17 | 546 | 23 | 563 | 6.18e-118 | 362 |
| Msa0621010 | AT1G62200.1 | 36.654 | 532 | 313 | 7 | 17 | 532 | 50 | 573 | 3.00e-114 | 353 |
| Msa0621010 | AT3G25260.1 | 36.312 | 526 | 303 | 10 | 19 | 543 | 21 | 515 | 1.13e-113 | 349 |
| Msa0621010 | AT2G02040.1 | 34.909 | 550 | 339 | 7 | 17 | 550 | 39 | 585 | 1.75e-113 | 351 |
| Msa0621010 | AT5G13400.1 | 37.238 | 572 | 332 | 11 | 2 | 550 | 48 | 615 | 3.13e-113 | 352 |
| Msa0621010 | AT2G37900.1 | 35.065 | 539 | 335 | 7 | 17 | 547 | 36 | 567 | 1.80e-111 | 346 |
| Msa0621010 | AT1G62200.2 | 34.938 | 561 | 312 | 8 | 17 | 532 | 50 | 602 | 2.03e-108 | 339 |
| Msa0621010 | AT1G62200.3 | 34.938 | 561 | 312 | 8 | 17 | 532 | 64 | 616 | 2.56e-108 | 339 |
| Msa0621010 | AT2G26690.1 | 36.331 | 556 | 334 | 9 | 17 | 559 | 22 | 570 | 1.54e-106 | 333 |
| Msa0621010 | AT1G68570.1 | 37.411 | 564 | 325 | 12 | 18 | 558 | 22 | 580 | 5.98e-106 | 332 |
| Msa0621010 | AT2G26690.2 | 37.132 | 544 | 319 | 10 | 29 | 559 | 4 | 537 | 6.41e-106 | 330 |
| Msa0621010 | AT2G37900.2 | 36.382 | 492 | 298 | 7 | 71 | 554 | 11 | 495 | 8.30e-105 | 326 |
| Msa0621010 | AT2G26690.3 | 37.500 | 528 | 310 | 9 | 45 | 559 | 5 | 525 | 1.16e-104 | 327 |
| Msa0621010 | AT3G53960.1 | 33.577 | 548 | 345 | 8 | 14 | 547 | 32 | 574 | 1.76e-104 | 328 |
| Msa0621010 | AT1G12110.1 | 34.321 | 574 | 348 | 9 | 17 | 570 | 25 | 589 | 3.11e-104 | 327 |
| Msa0621010 | AT1G68570.2 | 37.409 | 548 | 318 | 11 | 31 | 558 | 8 | 550 | 5.76e-104 | 326 |
| Msa0621010 | AT1G69870.1 | 34.266 | 572 | 344 | 10 | 17 | 560 | 49 | 616 | 3.85e-102 | 323 |
| Msa0621010 | AT2G40460.1 | 34.110 | 601 | 352 | 13 | 3 | 587 | 10 | 582 | 6.97e-102 | 321 |
| Msa0621010 | AT3G21670.1 | 35.714 | 546 | 325 | 8 | 17 | 548 | 27 | 560 | 1.47e-101 | 320 |
| Msa0621010 | AT3G54450.1 | 32.979 | 564 | 339 | 10 | 17 | 559 | 10 | 555 | 1.01e-100 | 317 |
| Msa0621010 | AT4G21680.1 | 34.091 | 572 | 346 | 11 | 3 | 550 | 14 | 578 | 1.36e-98 | 313 |
| Msa0621010 | AT2G02020.1 | 31.657 | 537 | 325 | 5 | 17 | 545 | 40 | 542 | 1.11e-97 | 309 |
| Msa0621010 | AT1G32450.1 | 30.988 | 597 | 373 | 11 | 1 | 564 | 12 | 602 | 3.25e-95 | 305 |
| Msa0621010 | AT5G46040.1 | 30.329 | 577 | 375 | 10 | 1 | 557 | 6 | 575 | 1.23e-90 | 292 |
| Msa0621010 | AT1G18880.1 | 32.014 | 581 | 361 | 13 | 3 | 558 | 7 | 578 | 2.74e-88 | 286 |
| Msa0621010 | AT1G72140.1 | 32.358 | 547 | 329 | 8 | 17 | 547 | 32 | 553 | 1.04e-86 | 281 |
| Msa0621010 | AT5G62680.1 | 31.404 | 570 | 353 | 13 | 22 | 561 | 46 | 607 | 1.14e-86 | 282 |
| Msa0621010 | AT5G46050.1 | 30.427 | 562 | 366 | 10 | 20 | 564 | 28 | 581 | 4.24e-86 | 280 |
| Msa0621010 | AT5G19640.1 | 30.292 | 548 | 350 | 12 | 20 | 552 | 60 | 590 | 6.40e-85 | 277 |
| Msa0621010 | AT1G72130.1 | 30.370 | 540 | 345 | 8 | 17 | 550 | 23 | 537 | 1.30e-83 | 272 |
| Msa0621010 | AT1G27080.1 | 32.131 | 582 | 360 | 13 | 17 | 580 | 12 | 576 | 1.06e-82 | 271 |
| Msa0621010 | AT5G28470.2 | 32.065 | 552 | 347 | 11 | 17 | 549 | 15 | 557 | 1.25e-81 | 267 |
| Msa0621010 | AT1G52190.1 | 29.932 | 588 | 377 | 13 | 17 | 576 | 19 | 599 | 6.51e-81 | 267 |
| Msa0621010 | AT1G22570.1 | 31.429 | 525 | 329 | 10 | 17 | 524 | 28 | 538 | 3.36e-80 | 264 |
| Msa0621010 | AT3G47960.1 | 31.261 | 563 | 343 | 16 | 22 | 552 | 64 | 614 | 9.31e-79 | 262 |
| Msa0621010 | AT5G28470.1 | 31.884 | 552 | 346 | 12 | 17 | 549 | 15 | 555 | 1.23e-78 | 259 |
| Msa0621010 | AT1G22540.1 | 32.072 | 555 | 342 | 11 | 11 | 551 | 24 | 557 | 5.03e-78 | 258 |
| Msa0621010 | AT1G27080.2 | 32.305 | 551 | 338 | 13 | 48 | 580 | 1 | 534 | 5.66e-78 | 257 |
| Msa0621010 | AT1G22550.1 | 30.672 | 551 | 348 | 10 | 17 | 549 | 28 | 562 | 2.16e-77 | 256 |
| Msa0621010 | AT1G69860.1 | 31.250 | 560 | 357 | 12 | 3 | 546 | 2 | 549 | 2.67e-77 | 256 |
| Msa0621010 | AT2G02020.2 | 27.933 | 537 | 324 | 6 | 17 | 545 | 40 | 521 | 3.83e-77 | 254 |
| Msa0621010 | AT1G72125.1 | 31.618 | 544 | 342 | 12 | 21 | 549 | 31 | 559 | 1.53e-76 | 254 |
| Msa0621010 | AT1G22570.2 | 32.056 | 496 | 306 | 10 | 46 | 524 | 20 | 501 | 2.25e-76 | 253 |
| Msa0621010 | AT1G72120.1 | 30.826 | 545 | 349 | 9 | 17 | 549 | 27 | 555 | 1.33e-74 | 249 |
| Msa0621010 | AT5G46050.2 | 31.656 | 477 | 301 | 10 | 105 | 564 | 1 | 469 | 8.14e-74 | 244 |
| Msa0621010 | AT1G72130.2 | 33.412 | 422 | 256 | 7 | 135 | 550 | 17 | 419 | 1.25e-73 | 242 |
| Msa0621010 | AT1G72130.3 | 33.412 | 422 | 256 | 7 | 135 | 550 | 17 | 419 | 1.25e-73 | 242 |
| Msa0621010 | AT3G16180.1 | 28.596 | 591 | 376 | 14 | 5 | 561 | 9 | 587 | 1.69e-73 | 247 |
| Msa0621010 | AT3G45660.1 | 28.596 | 577 | 359 | 17 | 8 | 560 | 10 | 557 | 3.79e-67 | 229 |
| Msa0621010 | AT3G45660.3 | 28.596 | 577 | 359 | 17 | 8 | 560 | 10 | 557 | 3.79e-67 | 229 |
| Msa0621010 | AT3G45660.2 | 28.885 | 547 | 339 | 16 | 35 | 560 | 61 | 578 | 9.48e-67 | 228 |
| Msa0621010 | AT3G45650.1 | 28.731 | 536 | 339 | 14 | 44 | 560 | 47 | 558 | 1.00e-64 | 223 |
| Msa0621010 | AT3G45680.1 | 28.671 | 572 | 357 | 17 | 2 | 552 | 7 | 548 | 3.18e-64 | 221 |
| Msa0621010 | AT3G45720.1 | 29.528 | 508 | 322 | 14 | 60 | 551 | 59 | 546 | 1.48e-62 | 216 |
| Msa0621010 | AT3G45700.1 | 28.445 | 566 | 356 | 16 | 2 | 552 | 7 | 538 | 2.41e-61 | 213 |
| Msa0621010 | AT3G45710.1 | 27.993 | 568 | 368 | 15 | 2 | 552 | 7 | 550 | 7.35e-61 | 212 |
| Msa0621010 | AT3G45650.2 | 27.402 | 562 | 339 | 15 | 44 | 560 | 47 | 584 | 2.64e-59 | 208 |
| Msa0621010 | AT5G14940.1 | 27.758 | 562 | 361 | 15 | 17 | 552 | 5 | 547 | 2.69e-57 | 202 |
| Msa0621010 | AT3G45690.1 | 25.540 | 556 | 340 | 17 | 19 | 560 | 18 | 513 | 1.02e-55 | 197 |
| Msa0621010 | AT3G01350.1 | 25.310 | 565 | 381 | 11 | 17 | 552 | 5 | 557 | 2.63e-52 | 189 |
| Msa0621010 | AT5G11570.1 | 26.749 | 243 | 169 | 3 | 298 | 538 | 236 | 471 | 1.43e-24 | 107 |
| Msa0621010 | AT5G11570.1 | 26.126 | 222 | 153 | 5 | 20 | 234 | 14 | 231 | 1.19e-13 | 73.9 |
| Msa0621010 | AT2G38100.2 | 23.049 | 551 | 337 | 19 | 47 | 561 | 2 | 501 | 1.98e-24 | 107 |
| Msa0621010 | AT2G38100.1 | 22.794 | 544 | 347 | 18 | 47 | 561 | 18 | 517 | 6.45e-24 | 106 |
| Msa0621010 | AT2G38100.3 | 22.794 | 544 | 347 | 18 | 47 | 561 | 24 | 523 | 7.87e-24 | 105 |
Find 117 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAACCAATAAGCTTATTT+TGG | 0.146048 | 4_2:+72822934 | Msa0621010:CDS |
| GATAACCAAAATAAGCTTAT+TGG | 0.163029 | 4_2:-72822939 | None:intergenic |
| TTGTTTCTTCCATTGAATTA+TGG | 0.165374 | 4_2:-72820471 | None:intergenic |
| TCTTTCAAAAGTTTCTATTT+TGG | 0.191150 | 4_2:+72820247 | Msa0621010:five_prime_UTR |
| GTTTAGCTAGCTTACCATTT+TGG | 0.195868 | 4_2:-72820349 | None:intergenic |
| TGTTTCTTCCATTGAATTAT+GGG | 0.210792 | 4_2:-72820470 | None:intergenic |
| ATTTCTTTAACTTCCTCTAT+TGG | 0.242727 | 4_2:+72823243 | Msa0621010:CDS |
| ACACTGTTGGTTCTGTTCTT+TGG | 0.247262 | 4_2:-72820148 | None:intergenic |
| GGATCAGTTATTGGTGTTAC+TGG | 0.254767 | 4_2:+72821372 | Msa0621010:CDS |
| AACAAGAATGTTACCTATAT+TGG | 0.263418 | 4_2:+72822593 | Msa0621010:CDS |
| CTGTGAAAGAACCAAGTTTA+AGG | 0.269342 | 4_2:-72822689 | None:intergenic |
| AGGTGAAACACCTCTCTTAA+TGG | 0.269533 | 4_2:+72823331 | Msa0621010:CDS |
| CAGTATTGGCTTCACTAGTT+TGG | 0.275066 | 4_2:-72823400 | None:intergenic |
| ACAAAGAAAAGTTCATAAAT+TGG | 0.278308 | 4_2:-72822765 | None:intergenic |
| AGCTTAGTACTATACTTTAT+TGG | 0.282321 | 4_2:+72820671 | Msa0621010:CDS |
| ATCATTGTGTTTGTATGCTT+TGG | 0.282815 | 4_2:+72821227 | Msa0621010:CDS |
| ACTTTCTTGCTCTCACTTGT+TGG | 0.283479 | 4_2:+72820752 | Msa0621010:CDS |
| TCAACTTTAGGATCAGTTAT+TGG | 0.296658 | 4_2:+72821363 | Msa0621010:CDS |
| TTTCTTTAACTTCCTCTATT+GGG | 0.299260 | 4_2:+72823244 | Msa0621010:CDS |
| CTTGATTTACCACATGCTTT+AGG | 0.299383 | 4_2:-72821168 | None:intergenic |
| TTATTAATACCGTTACTAAA+AGG | 0.302476 | 4_2:+72823123 | Msa0621010:CDS |
| AGAGCTTCCATGTTCATCTT+TGG | 0.307984 | 4_2:+72820506 | Msa0621010:CDS |
| AAGAAATAACCAACCTCATT+TGG | 0.321516 | 4_2:-72821736 | None:intergenic |
| ATGGAGAATACAAAGGAATT+AGG | 0.323607 | 4_2:+72823311 | Msa0621010:CDS |
| ATTGGTACTATTGTTGGTTC+TGG | 0.324362 | 4_2:+72823610 | Msa0621010:three_prime_UTR |
| TTGGTGTTACTGGTATTGTT+TGG | 0.332141 | 4_2:+72821382 | Msa0621010:CDS |
| ACAATTGTACTTGCCAATAT+AGG | 0.334608 | 4_2:-72822606 | None:intergenic |
| ACCTGAATAATCCTCAAAAT+AGG | 0.335933 | 4_2:-72821525 | None:intergenic |
| TCATTGTGTTTGTATGCTTT+GGG | 0.336923 | 4_2:+72821228 | Msa0621010:CDS |
| AAGAAAATTAGTGGGATAAC+AGG | 0.341586 | 4_2:-72822729 | None:intergenic |
| GCAGACATGTTCACTCTTGT+TGG | 0.342817 | 4_2:+72822987 | Msa0621010:CDS |
| TAAAGTTGTTCATTAGATTC+TGG | 0.349322 | 4_2:-72821668 | None:intergenic |
| AGAGGTTCATTAACAGCATT+TGG | 0.351216 | 4_2:+72821264 | Msa0621010:CDS |
| TTTCCATACTCTCTCCAAAA+TGG | 0.361256 | 4_2:+72820335 | Msa0621010:exon |
| ATATAGGTAACATTCTTGTT+AGG | 0.364001 | 4_2:-72822590 | None:intergenic |
| AAGACATTGATTTGATGTTA+AGG | 0.369908 | 4_2:+72823490 | Msa0621010:three_prime_UTR |
| TGGTGTTACTGGTATTGTTT+GGG | 0.373138 | 4_2:+72821383 | Msa0621010:CDS |
| TGCTAACCAATTTGATGAAA+AGG | 0.379188 | 4_2:+72821287 | Msa0621010:CDS |
| ATAACAGTAGCTTCTTCAAT+TGG | 0.385104 | 4_2:+72821444 | Msa0621010:CDS |
| AAAATCACTCACCACCCTTC+AGG | 0.386975 | 4_2:+72822801 | Msa0621010:CDS |
| TGTAACCAACCTTGTTTACT+TGG | 0.393968 | 4_2:-72823152 | None:intergenic |
| TAAACATTGGATGTGCAAAT+AGG | 0.396118 | 4_2:+72823539 | Msa0621010:three_prime_UTR |
| TGAAGTAGAAAGTGATTTCA+TGG | 0.400504 | 4_2:-72823045 | None:intergenic |
| TGTTTGTATGCTTTGGGAAT+GGG | 0.403406 | 4_2:+72821234 | Msa0621010:CDS |
| GCCATTTCAATGACAATAGC+TGG | 0.413834 | 4_2:+72822867 | Msa0621010:CDS |
| ACCAGCTATTGTCATTGAAA+TGG | 0.417173 | 4_2:-72822868 | None:intergenic |
| ACTTCCTCTATTGGGCCTCT+TGG | 0.427686 | 4_2:+72823252 | Msa0621010:CDS |
| GTGTTTGTATGCTTTGGGAA+TGG | 0.428271 | 4_2:+72821233 | Msa0621010:CDS |
| AGTAAACAAGGTTGGTTACA+AGG | 0.439747 | 4_2:+72823155 | Msa0621010:CDS |
| CAACAGATTCACCACATGTC+TGG | 0.446255 | 4_2:+72820799 | Msa0621010:CDS |
| GTTAAGGAAAACATAGTAGT+AGG | 0.451430 | 4_2:+72823506 | Msa0621010:three_prime_UTR |
| TTGGGAATGGGTGGAGTAAG+AGG | 0.455587 | 4_2:+72821246 | Msa0621010:CDS |
| GAAAGTGATTTCATGGTTGA+AGG | 0.467352 | 4_2:-72823038 | None:intergenic |
| TAATTGATTGGTACTATTGT+TGG | 0.467510 | 4_2:+72823604 | Msa0621010:three_prime_UTR |
| ACATAGTAGTAGGTTGTGTA+TGG | 0.485213 | 4_2:+72823516 | Msa0621010:three_prime_UTR |
| TGCGTGCTTGTATAATTGAT+TGG | 0.487662 | 4_2:+72823592 | Msa0621010:three_prime_UTR |
| AATTCAATGGAAGAAACAAA+AGG | 0.488343 | 4_2:+72820475 | Msa0621010:CDS |
| AATGTGCATAAGAAAATTAG+TGG | 0.493180 | 4_2:-72822738 | None:intergenic |
| GATCACAGTTCAAGCTGCAT+TGG | 0.495046 | 4_2:+72821134 | Msa0621010:CDS |
| CAAACCTTCCATGGTTGTTG+AGG | 0.513690 | 4_2:-72822537 | None:intergenic |
| AACTCAAACCCATAATTCAA+TGG | 0.515700 | 4_2:+72820462 | Msa0621010:CDS |
| CATAAAATTTGTCAAAGTGT+TGG | 0.518131 | 4_2:-72820723 | None:intergenic |
| TTGTATGCTTTGGGAATGGG+TGG | 0.519214 | 4_2:+72821237 | Msa0621010:CDS |
| TTTGTCAGCATTGGATAACA+TGG | 0.520721 | 4_2:+72820628 | Msa0621010:CDS |
| TACTATTGTTGGTTCTGGCA+CGG | 0.522892 | 4_2:+72823615 | Msa0621010:three_prime_UTR |
| GAGGTAAGTATCTGAGATGA+AGG | 0.523013 | 4_2:-72820777 | None:intergenic |
| AGAAGAGGGTCCCTCAGTAT+TGG | 0.526736 | 4_2:-72823414 | None:intergenic |
| TAAATACTAGAATACTAGAA+TGG | 0.529818 | 4_2:+72820115 | Msa0621010:five_prime_UTR |
| TCTTCTGATGAAACAGATGA+TGG | 0.532640 | 4_2:+72823434 | Msa0621010:CDS |
| TGTTCATTAGATTCTGGCAG+TGG | 0.534338 | 4_2:-72821662 | None:intergenic |
| ATTCAATGGAAGAAACAAAA+GGG | 0.537445 | 4_2:+72820476 | Msa0621010:CDS |
| ACACCTCTCTTAATGGTTGG+TGG | 0.538286 | 4_2:+72823338 | Msa0621010:CDS |
| GTCACTGTGCAAACCTTCCA+TGG | 0.538545 | 4_2:-72822546 | None:intergenic |
| AGATAGTAACAATTCAATGA+TGG | 0.541244 | 4_2:+72823292 | Msa0621010:CDS |
| ATCTGTTTCATCAGAAGAAG+AGG | 0.542967 | 4_2:-72823429 | None:intergenic |
| CTCTGTGTGTGCAGAGTCAA+AGG | 0.543882 | 4_2:+72823647 | Msa0621010:three_prime_UTR |
| AATTAGTGGGATAACAGGAA+TGG | 0.550662 | 4_2:-72822724 | None:intergenic |
| GTTACACAGCTTCAAAGAGT+TGG | 0.552152 | 4_2:+72822825 | Msa0621010:CDS |
| TGTACCAAGAGGCCCAATAG+AGG | 0.556413 | 4_2:-72823256 | None:intergenic |
| AATGCAATGAACCTTAAACT+TGG | 0.561968 | 4_2:+72822678 | Msa0621010:CDS |
| TTGAGATTGAAATGAGAAGA+AGG | 0.571870 | 4_2:-72820283 | None:intergenic |
| TGAAGCTGTGTAACACCTGA+AGG | 0.572853 | 4_2:-72822816 | None:intergenic |
| AAAACATGATGATAAAGCTA+AGG | 0.573309 | 4_2:+72823364 | Msa0621010:CDS |
| GAAGTTAAAAGAAGAGACCA+AGG | 0.573829 | 4_2:+72822897 | Msa0621010:CDS |
| GACGGTGAGCACAGAAACCA+AGG | 0.581377 | 4_2:+72820056 | Msa0621010:five_prime_UTR |
| TGAACCTCAACAACCATGGA+AGG | 0.582478 | 4_2:+72822533 | Msa0621010:CDS |
| CAGCTTCAAAGAGTTGGTGT+TGG | 0.586012 | 4_2:+72822831 | Msa0621010:CDS |
| TTGCACACACTAACCAAATG+AGG | 0.586220 | 4_2:+72821723 | Msa0621010:CDS |
| CAAACATTCTCAGTACAACA+AGG | 0.586833 | 4_2:+72822654 | Msa0621010:CDS |
| ATAACAGGAATGGATGATGC+AGG | 0.589149 | 4_2:-72822714 | None:intergenic |
| CTTCCACCAACCATTAAGAG+AGG | 0.596589 | 4_2:-72823341 | None:intergenic |
| AAATCAAGTTGTGTGGAAGG+AGG | 0.597719 | 4_2:+72821183 | Msa0621010:CDS |
| TTGTCAGCATTGGATAACAT+GGG | 0.598817 | 4_2:+72820629 | Msa0621010:CDS |
| CAAGAAGTAACCAAGTGACA+TGG | 0.600735 | 4_2:-72823081 | None:intergenic |
| CTCAAAATAGGACTTTCACC+AGG | 0.610110 | 4_2:-72821513 | None:intergenic |
| GAAACACCTCTCTTAATGGT+TGG | 0.612482 | 4_2:+72823335 | Msa0621010:CDS |
| ATTCTGAACCTCAACAACCA+TGG | 0.613634 | 4_2:+72822529 | Msa0621010:CDS |
| TTGGATGTGCAAATAGGAAG+TGG | 0.626202 | 4_2:+72823545 | Msa0621010:three_prime_UTR |
| TTCAATGATGGAGAATACAA+AGG | 0.626874 | 4_2:+72823304 | Msa0621010:CDS |
| TCACACCAAGTAAACAAGGT+TGG | 0.627331 | 4_2:+72823147 | Msa0621010:CDS |
| ATGTGCATAAGAAAATTAGT+GGG | 0.636944 | 4_2:-72822737 | None:intergenic |
| ACTAGTAAAGCATGTTAAGA+CGG | 0.638731 | 4_2:+72820038 | Msa0621010:five_prime_UTR |
| AGGATCACACCAAGTAAACA+AGG | 0.639605 | 4_2:+72823143 | Msa0621010:CDS |
| TCTGTTTCATCAGAAGAAGA+GGG | 0.647970 | 4_2:-72823428 | None:intergenic |
| AATTTACATCCTAAAGCATG+TGG | 0.649108 | 4_2:+72821159 | Msa0621010:CDS |
| GGTAAATCAAGTTGTGTGGA+AGG | 0.653776 | 4_2:+72821180 | Msa0621010:CDS |
| CAATGGAAGAAACAAAAGGG+TGG | 0.662396 | 4_2:+72820479 | Msa0621010:CDS |
| ACTAGTGAAGCCAATACTGA+GGG | 0.666695 | 4_2:+72823404 | Msa0621010:CDS |
| AGGTTGTGTATGGTAAACAT+TGG | 0.668701 | 4_2:+72823526 | Msa0621010:three_prime_UTR |
| AACTAGTGAAGCCAATACTG+AGG | 0.674814 | 4_2:+72823403 | Msa0621010:CDS |
| GAAGCTGTGTAACACCTGAA+GGG | 0.679710 | 4_2:-72822815 | None:intergenic |
| AAACATTCTCAGTACAACAA+GGG | 0.685525 | 4_2:+72822655 | Msa0621010:CDS |
| GTACTTACCAAAGATGAACA+TGG | 0.689840 | 4_2:-72820513 | None:intergenic |
| ATGTGGTAAATCAAGTTGTG+TGG | 0.691318 | 4_2:+72821176 | Msa0621010:CDS |
| GACATGTGGTGAATCTGTTG+AGG | 0.692585 | 4_2:-72820796 | None:intergenic |
| ACGGTGAGCACAGAAACCAA+GGG | 0.709215 | 4_2:+72820057 | Msa0621010:five_prime_UTR |
| GCTGTGTAACACCTGAAGGG+TGG | 0.734299 | 4_2:-72822812 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTCTTTATTTTATGTAAT+TGG | - | chr4_2:72820916-72820935 | None:intergenic | 15.0% |
| !! | AGAAAGAAAAAAAAAACATT+TGG | + | chr4_2:72820930-72820949 | Msa0621010:intron | 15.0% |
| !!! | GTTATTTATTTATTTTGAGA+GGG | + | chr4_2:72822294-72822313 | Msa0621010:intron | 15.0% |
| !! | TAAATACTAGAATACTAGAA+TGG | + | chr4_2:72820115-72820134 | Msa0621010:five_prime_UTR | 20.0% |
| !!! | TCTTTCAAAAGTTTCTATTT+TGG | + | chr4_2:72820247-72820266 | Msa0621010:five_prime_UTR | 20.0% |
| !!! | CTTTCAAAAGTTTCTATTTT+GGG | + | chr4_2:72820248-72820267 | Msa0621010:five_prime_UTR | 20.0% |
| !!! | AGTTTGAAATATGTTACTAT+AGG | + | chr4_2:72820418-72820437 | Msa0621010:intron | 20.0% |
| !!! | GTTTGAAATATGTTACTATA+GGG | + | chr4_2:72820419-72820438 | Msa0621010:intron | 20.0% |
| !!! | AAAAACAAAGAGTGTTAATT+TGG | - | chr4_2:72820549-72820568 | None:intergenic | 20.0% |
| !!! | TGTAACAAAACATATTGATT+TGG | + | chr4_2:72820578-72820597 | Msa0621010:intron | 20.0% |
| !!! | AACACTTTGACAAATTTTAT+GGG | + | chr4_2:72820725-72820744 | Msa0621010:CDS | 20.0% |
| !!! | TATTTTATGTAATTGGAACA+TGG | - | chr4_2:72820909-72820928 | None:intergenic | 20.0% |
| !!! | TATCACTTTTTCTTATGTTT+TGG | - | chr4_2:72822022-72822041 | None:intergenic | 20.0% |
| !!! | CAAGTACCAATTATTTATTT+TGG | + | chr4_2:72822161-72822180 | Msa0621010:intron | 20.0% |
| !! | ATGGTTCCAAAATAAATAAT+TGG | - | chr4_2:72822170-72822189 | None:intergenic | 20.0% |
| !!! | GGTTATTTATTTATTTTGAG+AGG | + | chr4_2:72822293-72822312 | Msa0621010:intron | 20.0% |
| !! | ACAAAGAAAAGTTCATAAAT+TGG | - | chr4_2:72822768-72822787 | None:intergenic | 20.0% |
| !!! | TGAGTGATTTTTCTAATAAA+TGG | - | chr4_2:72822792-72822811 | None:intergenic | 20.0% |
| !!! | TCTTTTCAATATGCTATATT+TGG | + | chr4_2:72822960-72822979 | Msa0621010:CDS | 20.0% |
| !! | TTATTAATACCGTTACTAAA+AGG | + | chr4_2:72823123-72823142 | Msa0621010:CDS | 20.0% |
| !!! | ACAATTTGAACTTGTTTTAT+TGG | + | chr4_2:72823195-72823214 | Msa0621010:CDS | 20.0% |
| !! | TTTTTAATGTCTTACACTGT+TGG | - | chr4_2:72820164-72820183 | None:intergenic | 25.0% |
| ! | TTAAAAATAAGAACCTCTTG+TGG | + | chr4_2:72820177-72820196 | Msa0621010:five_prime_UTR | 25.0% |
| ! | TGTTTCTTCCATTGAATTAT+GGG | - | chr4_2:72820473-72820492 | None:intergenic | 25.0% |
| !! | TTGTTTCTTCCATTGAATTA+TGG | - | chr4_2:72820474-72820493 | None:intergenic | 25.0% |
| ! | AATTCAATGGAAGAAACAAA+AGG | + | chr4_2:72820475-72820494 | Msa0621010:CDS | 25.0% |
| ! | ATTCAATGGAAGAAACAAAA+GGG | + | chr4_2:72820476-72820495 | Msa0621010:CDS | 25.0% |
| ! | AGCTTAGTACTATACTTTAT+TGG | + | chr4_2:72820671-72820690 | Msa0621010:CDS | 25.0% |
| ! | CATAAAATTTGTCAAAGTGT+TGG | - | chr4_2:72820726-72820745 | None:intergenic | 25.0% |
| !! | CAACACTTTGACAAATTTTA+TGG | + | chr4_2:72820724-72820743 | Msa0621010:CDS | 25.0% |
| !! | AAAAAACATTTGGTTTAGAG+AGG | + | chr4_2:72820940-72820959 | Msa0621010:intron | 25.0% |
| !! | TTTTGTCTGGTACAAAATTA+CGG | + | chr4_2:72821004-72821023 | Msa0621010:intron | 25.0% |
| ! | AATACTTGTATGTATTGTGT+AGG | + | chr4_2:72821101-72821120 | Msa0621010:intron | 25.0% |
| !! | CTTTTACTTAGTTCAACTTT+AGG | + | chr4_2:72821351-72821370 | Msa0621010:CDS | 25.0% |
| !!! | TAACCATTATTGTTTTATGC+AGG | + | chr4_2:72821607-72821626 | Msa0621010:intron | 25.0% |
| ! | TAACCTGCATAAAACAATAA+TGG | - | chr4_2:72821613-72821632 | None:intergenic | 25.0% |
| ! | TAAAGTTGTTCATTAGATTC+TGG | - | chr4_2:72821671-72821690 | None:intergenic | 25.0% |
| !!! | AACATTTTGTGATAATGTGT+TGG | + | chr4_2:72821784-72821803 | Msa0621010:intron | 25.0% |
| ! | ATTAAGTAATGCCAAGAATT+TGG | + | chr4_2:72821904-72821923 | Msa0621010:intron | 25.0% |
| ! | TTAAGTAATGCCAAGAATTT+GGG | + | chr4_2:72821905-72821924 | Msa0621010:intron | 25.0% |
| ! | AAATACCACAAAGAAAAAAG+GGG | - | chr4_2:72822096-72822115 | None:intergenic | 25.0% |
| ! | CAAATACCACAAAGAAAAAA+GGG | - | chr4_2:72822097-72822116 | None:intergenic | 25.0% |
| ! | CTATGTTATCTACAAAGTAA+AGG | - | chr4_2:72822130-72822149 | None:intergenic | 25.0% |
| !!! | TTTATTTATTTTGAGAGGGT+AGG | + | chr4_2:72822298-72822317 | Msa0621010:intron | 25.0% |
| !!! | TTATTTATTTTGAGAGGGTA+GGG | + | chr4_2:72822299-72822318 | Msa0621010:intron | 25.0% |
| ! | TTGTGTAAAGGGAAATAAAT+GGG | - | chr4_2:72822426-72822445 | None:intergenic | 25.0% |
| ! | TTTGTGTAAAGGGAAATAAA+TGG | - | chr4_2:72822427-72822446 | None:intergenic | 25.0% |
| ! | CATGCATTTATTTGTGTAAA+GGG | - | chr4_2:72822437-72822456 | None:intergenic | 25.0% |
| ! | GCATTTATACTCAAATGTTA+TGG | + | chr4_2:72822456-72822475 | Msa0621010:intron | 25.0% |
| ! | ATATAGGTAACATTCTTGTT+AGG | - | chr4_2:72822593-72822612 | None:intergenic | 25.0% |
| ! | AACAAGAATGTTACCTATAT+TGG | + | chr4_2:72822593-72822612 | Msa0621010:CDS | 25.0% |
| ! | ATGTGCATAAGAAAATTAGT+GGG | - | chr4_2:72822740-72822759 | None:intergenic | 25.0% |
| ! | AATGTGCATAAGAAAATTAG+TGG | - | chr4_2:72822741-72822760 | None:intergenic | 25.0% |
| !!! | ATAAGCTTATTGGTTTTGAA+GGG | - | chr4_2:72822932-72822951 | None:intergenic | 25.0% |
| !!! | AATAAGCTTATTGGTTTTGA+AGG | - | chr4_2:72822933-72822952 | None:intergenic | 25.0% |
| !! | CAAAACCAATAAGCTTATTT+TGG | + | chr4_2:72822934-72822953 | Msa0621010:CDS | 25.0% |
| ! | GATAACCAAAATAAGCTTAT+TGG | - | chr4_2:72822942-72822961 | None:intergenic | 25.0% |
| !! | ATTTCTTTAACTTCCTCTAT+TGG | + | chr4_2:72823243-72823262 | Msa0621010:CDS | 25.0% |
| !! | TTTCTTTAACTTCCTCTATT+GGG | + | chr4_2:72823244-72823263 | Msa0621010:CDS | 25.0% |
| ! | AGATAGTAACAATTCAATGA+TGG | + | chr4_2:72823292-72823311 | Msa0621010:CDS | 25.0% |
| ! | AAAACATGATGATAAAGCTA+AGG | + | chr4_2:72823364-72823383 | Msa0621010:CDS | 25.0% |
| !!! | AAGACATTGATTTGATGTTA+AGG | + | chr4_2:72823490-72823509 | Msa0621010:three_prime_UTR | 25.0% |
| ! | TAATTGATTGGTACTATTGT+TGG | + | chr4_2:72823604-72823623 | Msa0621010:three_prime_UTR | 25.0% |
| ACTAGTAAAGCATGTTAAGA+CGG | + | chr4_2:72820038-72820057 | Msa0621010:five_prime_UTR | 30.0% | |
| TGATCATAAAAATCCACAAG+AGG | - | chr4_2:72820193-72820212 | None:intergenic | 30.0% | |
| TTGAGATTGAAATGAGAAGA+AGG | - | chr4_2:72820286-72820305 | None:intergenic | 30.0% | |
| CAAACTGTTACAAAAGAGAA+GGG | - | chr4_2:72820404-72820423 | None:intergenic | 30.0% | |
| TCAAACTGTTACAAAAGAGA+AGG | - | chr4_2:72820405-72820424 | None:intergenic | 30.0% | |
| AACTCAAACCCATAATTCAA+TGG | + | chr4_2:72820462-72820481 | Msa0621010:CDS | 30.0% | |
| TTATGAGTTTGACAGAATCA+CGG | + | chr4_2:72820973-72820992 | Msa0621010:intron | 30.0% | |
| AATTTACATCCTAAAGCATG+TGG | + | chr4_2:72821159-72821178 | Msa0621010:CDS | 30.0% | |
| ATCATTGTGTTTGTATGCTT+TGG | + | chr4_2:72821227-72821246 | Msa0621010:CDS | 30.0% | |
| TCATTGTGTTTGTATGCTTT+GGG | + | chr4_2:72821228-72821247 | Msa0621010:CDS | 30.0% | |
| TGCTAACCAATTTGATGAAA+AGG | + | chr4_2:72821287-72821306 | Msa0621010:CDS | 30.0% | |
| ! | TTGGATCCTTTTCATCAAAT+TGG | - | chr4_2:72821296-72821315 | None:intergenic | 30.0% |
| !!! | CACTTGCAACTTTTTTCAAT+TGG | + | chr4_2:72821328-72821347 | Msa0621010:CDS | 30.0% |
| !! | TCAACTTTAGGATCAGTTAT+TGG | + | chr4_2:72821363-72821382 | Msa0621010:CDS | 30.0% |
| ATAACAGTAGCTTCTTCAAT+TGG | + | chr4_2:72821444-72821463 | Msa0621010:CDS | 30.0% | |
| !! | TCCTATTTTGAGGATTATTC+AGG | + | chr4_2:72821524-72821543 | Msa0621010:CDS | 30.0% |
| ACCTGAATAATCCTCAAAAT+AGG | - | chr4_2:72821528-72821547 | None:intergenic | 30.0% | |
| ! | TTTTATGCAGGTTATTGTTG+TGG | + | chr4_2:72821619-72821638 | Msa0621010:intron | 30.0% |
| AAGAAATAACCAACCTCATT+TGG | - | chr4_2:72821739-72821758 | None:intergenic | 30.0% | |
| AAAGAATCTTAACAATGTGC+TGG | - | chr4_2:72821867-72821886 | None:intergenic | 30.0% | |
| GTTAACTAAAAAGCAAAGAG+AGG | - | chr4_2:72821998-72822017 | None:intergenic | 30.0% | |
| ! | TTTTTCCCCTTTTTTCTTTG+TGG | + | chr4_2:72822088-72822107 | Msa0621010:intron | 30.0% |
| CCAAATACCACAAAGAAAAA+AGG | - | chr4_2:72822098-72822117 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTCTTTGTGGTATT+TGG | + | chr4_2:72822095-72822114 | Msa0621010:intron | 30.0% |
| CGATTAAGTCATACTTTCTA+TGG | - | chr4_2:72822189-72822208 | None:intergenic | 30.0% | |
| ! | TAGAAAGTATGACTTAATCG+CGG | + | chr4_2:72822189-72822208 | Msa0621010:intron | 30.0% |
| !!! | TATTTATTTTGAGAGGGTAG+GGG | + | chr4_2:72822300-72822319 | Msa0621010:intron | 30.0% |
| AATTGCTAAGGTGAAATTGA+AGG | + | chr4_2:72822329-72822348 | Msa0621010:intron | 30.0% | |
| GATGACAAAGATATTGTTTG+TGG | + | chr4_2:72822376-72822395 | Msa0621010:intron | 30.0% | |
| GCATGCATTTATTTGTGTAA+AGG | - | chr4_2:72822438-72822457 | None:intergenic | 30.0% | |
| ! | ACTCAAATGTTATGGTTTGT+TGG | + | chr4_2:72822464-72822483 | Msa0621010:intron | 30.0% |
| ACAATTGTACTTGCCAATAT+AGG | - | chr4_2:72822609-72822628 | None:intergenic | 30.0% | |
| AAACATTCTCAGTACAACAA+GGG | + | chr4_2:72822655-72822674 | Msa0621010:CDS | 30.0% | |
| AATGCAATGAACCTTAAACT+TGG | + | chr4_2:72822678-72822697 | Msa0621010:CDS | 30.0% | |
| AAGAAAATTAGTGGGATAAC+AGG | - | chr4_2:72822732-72822751 | None:intergenic | 30.0% | |
| TGAAGTAGAAAGTGATTTCA+TGG | - | chr4_2:72823048-72823067 | None:intergenic | 30.0% | |
| ! | TTCAATGATGGAGAATACAA+AGG | + | chr4_2:72823304-72823323 | Msa0621010:CDS | 30.0% |
| ATGGAGAATACAAAGGAATT+AGG | + | chr4_2:72823311-72823330 | Msa0621010:CDS | 30.0% | |
| GTTAAGGAAAACATAGTAGT+AGG | + | chr4_2:72823506-72823525 | Msa0621010:three_prime_UTR | 30.0% | |
| TAAACATTGGATGTGCAAAT+AGG | + | chr4_2:72823539-72823558 | Msa0621010:three_prime_UTR | 30.0% | |
| ACAGAAACCAAGGGAAAAAA+AGG | + | chr4_2:72820066-72820085 | Msa0621010:five_prime_UTR | 35.0% | |
| !!! | CTTTCTACCTTTTTTTCCCT+TGG | - | chr4_2:72820076-72820095 | None:intergenic | 35.0% |
| TTTCCATACTCTCTCCAAAA+TGG | + | chr4_2:72820335-72820354 | Msa0621010:exon | 35.0% | |
| !! | TTACCATTTTGGAGAGAGTA+TGG | - | chr4_2:72820341-72820360 | None:intergenic | 35.0% |
| !! | GTTTAGCTAGCTTACCATTT+TGG | - | chr4_2:72820352-72820371 | None:intergenic | 35.0% |
| GTACTTACCAAAGATGAACA+TGG | - | chr4_2:72820516-72820535 | None:intergenic | 35.0% | |
| ! | TTTGTCAGCATTGGATAACA+TGG | + | chr4_2:72820628-72820647 | Msa0621010:CDS | 35.0% |
| ! | TTGTCAGCATTGGATAACAT+GGG | + | chr4_2:72820629-72820648 | Msa0621010:CDS | 35.0% |
| TGTAATTGGAACATGGCATT+GGG | - | chr4_2:72820902-72820921 | None:intergenic | 35.0% | |
| ATGTAATTGGAACATGGCAT+TGG | - | chr4_2:72820903-72820922 | None:intergenic | 35.0% | |
| TGTATGTATTGTGTAGGCTT+TGG | + | chr4_2:72821107-72821126 | Msa0621010:intron | 35.0% | |
| CTTGATTTACCACATGCTTT+AGG | - | chr4_2:72821171-72821190 | None:intergenic | 35.0% | |
| ! | ATGTGGTAAATCAAGTTGTG+TGG | + | chr4_2:72821176-72821195 | Msa0621010:CDS | 35.0% |
| !! | TGTTTGTATGCTTTGGGAAT+GGG | + | chr4_2:72821234-72821253 | Msa0621010:CDS | 35.0% |
| AGAGGTTCATTAACAGCATT+TGG | + | chr4_2:72821264-72821283 | Msa0621010:CDS | 35.0% | |
| !! | TTGGTGTTACTGGTATTGTT+TGG | + | chr4_2:72821382-72821401 | Msa0621010:CDS | 35.0% |
| !! | TGGTGTTACTGGTATTGTTT+GGG | + | chr4_2:72821383-72821402 | Msa0621010:CDS | 35.0% |
| TACACAAAAAGCTTGGCATT+GGG | + | chr4_2:72821410-72821429 | Msa0621010:CDS | 35.0% | |
| !!! | GGTTTTGTAACACTTGCTAT+TGG | + | chr4_2:72821465-72821484 | Msa0621010:CDS | 35.0% |
| !! | GGAGTTTTGATACGGTAAAA+AGG | - | chr4_2:72821495-72821514 | None:intergenic | 35.0% |
| ! | TTTTACCGTATCAAAACTCC+TGG | + | chr4_2:72821495-72821514 | Msa0621010:CDS | 35.0% |
| !! | TTTCACCAGGAGTTTTGATA+CGG | - | chr4_2:72821503-72821522 | None:intergenic | 35.0% |
| AGACTTACAGAGAATGATCA+TGG | + | chr4_2:72821963-72821982 | Msa0621010:intron | 35.0% | |
| CTGATTTCGTTGTGAAATCA+GGG | - | chr4_2:72822222-72822241 | None:intergenic | 35.0% | |
| CTGATTTCACAACGAAATCA+GGG | + | chr4_2:72822221-72822240 | Msa0621010:intron | 35.0% | |
| TGATTCAAAACACACGCTAA+GGG | + | chr4_2:72822272-72822291 | Msa0621010:intron | 35.0% | |
| !! | ATGGTTTGTTGGATTGAATC+AGG | + | chr4_2:72822475-72822494 | Msa0621010:intron | 35.0% |
| CAAACATTCTCAGTACAACA+AGG | + | chr4_2:72822654-72822673 | Msa0621010:CDS | 35.0% | |
| CTGTGAAAGAACCAAGTTTA+AGG | - | chr4_2:72822692-72822711 | None:intergenic | 35.0% | |
| AATTAGTGGGATAACAGGAA+TGG | - | chr4_2:72822727-72822746 | None:intergenic | 35.0% | |
| ACCAGCTATTGTCATTGAAA+TGG | - | chr4_2:72822871-72822890 | None:intergenic | 35.0% | |
| GAAGTTAAAAGAAGAGACCA+AGG | + | chr4_2:72822897-72822916 | Msa0621010:CDS | 35.0% | |
| GAAAGTGATTTCATGGTTGA+AGG | - | chr4_2:72823041-72823060 | None:intergenic | 35.0% | |
| ! | TGGTGTGATCCTTTTAGTAA+CGG | - | chr4_2:72823135-72823154 | None:intergenic | 35.0% |
| ! | TGTAACCAACCTTGTTTACT+TGG | - | chr4_2:72823155-72823174 | None:intergenic | 35.0% |
| ! | AGTAAACAAGGTTGGTTACA+AGG | + | chr4_2:72823155-72823174 | Msa0621010:CDS | 35.0% |
| ! | TGTTTTGTACTTGTACCAAG+AGG | - | chr4_2:72823270-72823289 | None:intergenic | 35.0% |
| TCTGTTTCATCAGAAGAAGA+GGG | - | chr4_2:72823431-72823450 | None:intergenic | 35.0% | |
| ATCTGTTTCATCAGAAGAAG+AGG | - | chr4_2:72823432-72823451 | None:intergenic | 35.0% | |
| TCTTCTGATGAAACAGATGA+TGG | + | chr4_2:72823434-72823453 | Msa0621010:CDS | 35.0% | |
| ACATAGTAGTAGGTTGTGTA+TGG | + | chr4_2:72823516-72823535 | Msa0621010:three_prime_UTR | 35.0% | |
| AGGTTGTGTATGGTAAACAT+TGG | + | chr4_2:72823526-72823545 | Msa0621010:three_prime_UTR | 35.0% | |
| TGCGTGCTTGTATAATTGAT+TGG | + | chr4_2:72823592-72823611 | Msa0621010:three_prime_UTR | 35.0% | |
| !! | ATTGGTACTATTGTTGGTTC+TGG | + | chr4_2:72823610-72823629 | Msa0621010:three_prime_UTR | 35.0% |
| !! | ACACTGTTGGTTCTGTTCTT+TGG | - | chr4_2:72820151-72820170 | None:intergenic | 40.0% |
| CAATGGAAGAAACAAAAGGG+TGG | + | chr4_2:72820479-72820498 | Msa0621010:CDS | 40.0% | |
| AGAGCTTCCATGTTCATCTT+TGG | + | chr4_2:72820506-72820525 | Msa0621010:CDS | 40.0% | |
| !! | TGATGCAGTTTTGTCAGCAT+TGG | + | chr4_2:72820619-72820638 | Msa0621010:intron | 40.0% |
| !! | CATGGGTTTTGTGACAAACA+TGG | + | chr4_2:72820646-72820665 | Msa0621010:CDS | 40.0% |
| ACTTTCTTGCTCTCACTTGT+TGG | + | chr4_2:72820752-72820771 | Msa0621010:CDS | 40.0% | |
| ! | GAGGTAAGTATCTGAGATGA+AGG | - | chr4_2:72820780-72820799 | None:intergenic | 40.0% |
| !!! | TTCACCACATGTCTGGTTTT+TGG | + | chr4_2:72820806-72820825 | Msa0621010:CDS | 40.0% |
| TGATCCAAAAACCAGACATG+TGG | - | chr4_2:72820813-72820832 | None:intergenic | 40.0% | |
| ! | TGGCATTGGGATTTGGAATT+TGG | - | chr4_2:72820889-72820908 | None:intergenic | 40.0% |
| TTCTGTCAAACTCATAAGCG+AGG | - | chr4_2:72820970-72820989 | None:intergenic | 40.0% | |
| ! | GGTAAATCAAGTTGTGTGGA+AGG | + | chr4_2:72821180-72821199 | Msa0621010:CDS | 40.0% |
| ! | AAATCAAGTTGTGTGGAAGG+AGG | + | chr4_2:72821183-72821202 | Msa0621010:CDS | 40.0% |
| !! | GTGTTTGTATGCTTTGGGAA+TGG | + | chr4_2:72821233-72821252 | Msa0621010:CDS | 40.0% |
| ! | GCAAGTGCTTTTGCTTCATT+TGG | - | chr4_2:72821315-72821334 | None:intergenic | 40.0% |
| !! | GGATCAGTTATTGGTGTTAC+TGG | + | chr4_2:72821372-72821391 | Msa0621010:CDS | 40.0% |
| ! | GGGTTAGTACACAAAAAGCT+TGG | + | chr4_2:72821403-72821422 | Msa0621010:CDS | 40.0% |
| GTACACAAAAAGCTTGGCAT+TGG | + | chr4_2:72821409-72821428 | Msa0621010:CDS | 40.0% | |
| ACACAAAAAGCTTGGCATTG+GGG | + | chr4_2:72821411-72821430 | Msa0621010:CDS | 40.0% | |
| CTCAAAATAGGACTTTCACC+AGG | - | chr4_2:72821516-72821535 | None:intergenic | 40.0% | |
| ! | CTGGTGAAAGTCCTATTTTG+AGG | + | chr4_2:72821514-72821533 | Msa0621010:CDS | 40.0% |
| TGTTCATTAGATTCTGGCAG+TGG | - | chr4_2:72821665-72821684 | None:intergenic | 40.0% | |
| TTGCACACACTAACCAAATG+AGG | + | chr4_2:72821723-72821742 | Msa0621010:CDS | 40.0% | |
| ACACACTAACCAAATGAGGT+TGG | + | chr4_2:72821727-72821746 | Msa0621010:intron | 40.0% | |
| TGATAGTAGGCCCAAATTCT+TGG | - | chr4_2:72821918-72821937 | None:intergenic | 40.0% | |
| GTGTAGAAGTGAGTGATAGT+AGG | - | chr4_2:72821931-72821950 | None:intergenic | 40.0% | |
| ATCACTCACTTCTACACGTT+CGG | + | chr4_2:72821934-72821953 | Msa0621010:intron | 40.0% | |
| !! | TTTTTCAGTGAGTTTGCGTC+AGG | - | chr4_2:72822056-72822075 | None:intergenic | 40.0% |
| ATTTCGTTGTGAAATCAGGG+TGG | - | chr4_2:72822219-72822238 | None:intergenic | 40.0% | |
| CCTGATTTCGTTGTGAAATC+AGG | - | chr4_2:72822223-72822242 | None:intergenic | 40.0% | |
| CCTGATTTCACAACGAAATC+AGG | + | chr4_2:72822220-72822239 | Msa0621010:intron | 40.0% | |
| GTGATTCAAAACACACGCTA+AGG | + | chr4_2:72822271-72822290 | Msa0621010:intron | 40.0% | |
| ATTCTGAACCTCAACAACCA+TGG | + | chr4_2:72822529-72822548 | Msa0621010:CDS | 40.0% | |
| ATAACAGGAATGGATGATGC+AGG | - | chr4_2:72822717-72822736 | None:intergenic | 40.0% | |
| GTTACACAGCTTCAAAGAGT+TGG | + | chr4_2:72822825-72822844 | Msa0621010:CDS | 40.0% | |
| GCCATTTCAATGACAATAGC+TGG | + | chr4_2:72822867-72822886 | Msa0621010:CDS | 40.0% | |
| ! | TTGAAGGGTCTTTTCTTCCT+TGG | - | chr4_2:72822917-72822936 | None:intergenic | 40.0% |
| ! | ACGTTTTTGTCCATGTCACT+TGG | + | chr4_2:72823071-72823090 | Msa0621010:CDS | 40.0% |
| CAAGAAGTAACCAAGTGACA+TGG | - | chr4_2:72823084-72823103 | None:intergenic | 40.0% | |
| AGGATCACACCAAGTAAACA+AGG | + | chr4_2:72823143-72823162 | Msa0621010:CDS | 40.0% | |
| TCACACCAAGTAAACAAGGT+TGG | + | chr4_2:72823147-72823166 | Msa0621010:CDS | 40.0% | |
| AGGTGAAACACCTCTCTTAA+TGG | + | chr4_2:72823331-72823350 | Msa0621010:CDS | 40.0% | |
| GAAACACCTCTCTTAATGGT+TGG | + | chr4_2:72823335-72823354 | Msa0621010:CDS | 40.0% | |
| !! | CAGTATTGGCTTCACTAGTT+TGG | - | chr4_2:72823403-72823422 | None:intergenic | 40.0% |
| AACTAGTGAAGCCAATACTG+AGG | + | chr4_2:72823403-72823422 | Msa0621010:CDS | 40.0% | |
| ACTAGTGAAGCCAATACTGA+GGG | + | chr4_2:72823404-72823423 | Msa0621010:CDS | 40.0% | |
| TTGGATGTGCAAATAGGAAG+TGG | + | chr4_2:72823545-72823564 | Msa0621010:three_prime_UTR | 40.0% | |
| !! | TACTATTGTTGGTTCTGGCA+CGG | + | chr4_2:72823615-72823634 | Msa0621010:three_prime_UTR | 40.0% |
| GACATGTGGTGAATCTGTTG+AGG | - | chr4_2:72820799-72820818 | None:intergenic | 45.0% | |
| CAACAGATTCACCACATGTC+TGG | + | chr4_2:72820799-72820818 | Msa0621010:CDS | 45.0% | |
| ! | TGGAACATGGCATTGGGATT+TGG | - | chr4_2:72820896-72820915 | None:intergenic | 45.0% |
| !! | CACGGTGAATCACTTTTGTC+TGG | + | chr4_2:72820991-72821010 | Msa0621010:intron | 45.0% |
| GATCACAGTTCAAGCTGCAT+TGG | + | chr4_2:72821134-72821153 | Msa0621010:CDS | 45.0% | |
| !! | TTGTATGCTTTGGGAATGGG+TGG | + | chr4_2:72821237-72821256 | Msa0621010:CDS | 45.0% |
| TCACTCACTTCTACACGTTC+GGG | + | chr4_2:72821935-72821954 | Msa0621010:intron | 45.0% | |
| !!! | TTATTTTGAGAGGGTAGGGG+AGG | + | chr4_2:72822303-72822322 | Msa0621010:intron | 45.0% |
| TGAACCTCAACAACCATGGA+AGG | + | chr4_2:72822533-72822552 | Msa0621010:CDS | 45.0% | |
| CAAACCTTCCATGGTTGTTG+AGG | - | chr4_2:72822540-72822559 | None:intergenic | 45.0% | |
| AAAATCACTCACCACCCTTC+AGG | + | chr4_2:72822801-72822820 | Msa0621010:CDS | 45.0% | |
| GAAGCTGTGTAACACCTGAA+GGG | - | chr4_2:72822818-72822837 | None:intergenic | 45.0% | |
| TGAAGCTGTGTAACACCTGA+AGG | - | chr4_2:72822819-72822838 | None:intergenic | 45.0% | |
| !! | CAGCTTCAAAGAGTTGGTGT+TGG | + | chr4_2:72822831-72822850 | Msa0621010:CDS | 45.0% |
| GCAGACATGTTCACTCTTGT+TGG | + | chr4_2:72822987-72823006 | Msa0621010:CDS | 45.0% | |
| ACACCTCTCTTAATGGTTGG+TGG | + | chr4_2:72823338-72823357 | Msa0621010:CDS | 45.0% | |
| CTTCCACCAACCATTAAGAG+AGG | - | chr4_2:72823344-72823363 | None:intergenic | 45.0% | |
| ACGGTGAGCACAGAAACCAA+GGG | + | chr4_2:72820057-72820076 | Msa0621010:five_prime_UTR | 50.0% | |
| TTGGGAATGGGTGGAGTAAG+AGG | + | chr4_2:72821246-72821265 | Msa0621010:CDS | 50.0% | |
| CACTCACTTCTACACGTTCG+GGG | + | chr4_2:72821936-72821955 | Msa0621010:intron | 50.0% | |
| TAGGGGAGGTGGAATTGCTA+AGG | + | chr4_2:72822317-72822336 | Msa0621010:intron | 50.0% | |
| GTCACTGTGCAAACCTTCCA+TGG | - | chr4_2:72822549-72822568 | None:intergenic | 50.0% | |
| ACTTCCTCTATTGGGCCTCT+TGG | + | chr4_2:72823252-72823271 | Msa0621010:CDS | 50.0% | |
| TGTACCAAGAGGCCCAATAG+AGG | - | chr4_2:72823259-72823278 | None:intergenic | 50.0% | |
| AGAAGAGGGTCCCTCAGTAT+TGG | - | chr4_2:72823417-72823436 | None:intergenic | 50.0% | |
| CTCTGTGTGTGCAGAGTCAA+AGG | + | chr4_2:72823647-72823666 | Msa0621010:three_prime_UTR | 50.0% | |
| GACGGTGAGCACAGAAACCA+AGG | + | chr4_2:72820056-72820075 | Msa0621010:five_prime_UTR | 55.0% | |
| !! | TTTTGAGAGGGTAGGGGAGG+TGG | + | chr4_2:72822306-72822325 | Msa0621010:intron | 55.0% |
| GCTGTGTAACACCTGAAGGG+TGG | - | chr4_2:72822815-72822834 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 72820031 | 72823816 | 72820031 | ID=Msa0621010;Name=Msa0621010 |
| chr4_2 | mRNA | 72820031 | 72823816 | 72820031 | ID=Msa0621010-mRNA-1;Parent=Msa0621010;Name=Msa0621010-mRNA-1;_AED=0.06;_eAED=0.06;_QI=323|1|1|1|0.83|0.71|7|301|610 |
| chr4_2 | exon | 72820031 | 72820356 | 72820031 | ID=Msa0621010-mRNA-1:exon:21788;Parent=Msa0621010-mRNA-1 |
| chr4_2 | exon | 72820440 | 72820527 | 72820440 | ID=Msa0621010-mRNA-1:exon:21789;Parent=Msa0621010-mRNA-1 |
| chr4_2 | exon | 72820627 | 72820844 | 72820627 | ID=Msa0621010-mRNA-1:exon:21790;Parent=Msa0621010-mRNA-1 |
| chr4_2 | exon | 72821123 | 72821545 | 72821123 | ID=Msa0621010-mRNA-1:exon:21791;Parent=Msa0621010-mRNA-1 |
| chr4_2 | exon | 72821629 | 72821744 | 72821629 | ID=Msa0621010-mRNA-1:exon:21792;Parent=Msa0621010-mRNA-1 |
| chr4_2 | exon | 72822497 | 72823711 | 72822497 | ID=Msa0621010-mRNA-1:exon:21793;Parent=Msa0621010-mRNA-1 |
| chr4_2 | exon | 72823746 | 72823816 | 72823746 | ID=Msa0621010-mRNA-1:exon:21794;Parent=Msa0621010-mRNA-1 |
| chr4_2 | five_prime_UTR | 72820031 | 72820353 | 72820031 | ID=Msa0621010-mRNA-1:five_prime_utr;Parent=Msa0621010-mRNA-1 |
| chr4_2 | CDS | 72820354 | 72820356 | 72820354 | ID=Msa0621010-mRNA-1:cds;Parent=Msa0621010-mRNA-1 |
| chr4_2 | CDS | 72820440 | 72820527 | 72820440 | ID=Msa0621010-mRNA-1:cds;Parent=Msa0621010-mRNA-1 |
| chr4_2 | CDS | 72820627 | 72820844 | 72820627 | ID=Msa0621010-mRNA-1:cds;Parent=Msa0621010-mRNA-1 |
| chr4_2 | CDS | 72821123 | 72821545 | 72821123 | ID=Msa0621010-mRNA-1:cds;Parent=Msa0621010-mRNA-1 |
| chr4_2 | CDS | 72821629 | 72821744 | 72821629 | ID=Msa0621010-mRNA-1:cds;Parent=Msa0621010-mRNA-1 |
| chr4_2 | CDS | 72822497 | 72823481 | 72822497 | ID=Msa0621010-mRNA-1:cds;Parent=Msa0621010-mRNA-1 |
| chr4_2 | three_prime_UTR | 72823482 | 72823711 | 72823482 | ID=Msa0621010-mRNA-1:three_prime_utr;Parent=Msa0621010-mRNA-1 |
| chr4_2 | three_prime_UTR | 72823746 | 72823816 | 72823746 | ID=Msa0621010-mRNA-1:three_prime_utr;Parent=Msa0621010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
