Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414340 | sp|Q0JHF8|F16P2_ORYSJ | 74.925 | 335 | 49 | 1 | 1 | 300 | 1 | 335 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414340 | G7IL84 | 88.304 | 342 | 5 | 1 | 1 | 307 | 1 | 342 | 0.0 | 608 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1414340 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa1414340 | -0.829325 | 5.484740e-55 | -8.615850e-47 |
| Msa0037180 | Msa1414340 | 0.805176 | 1.514964e-49 | -8.615850e-47 |
| Msa0039890 | Msa1414340 | 0.805271 | 1.447098e-49 | -8.615850e-47 |
| Msa0040210 | Msa1414340 | 0.809717 | 1.648503e-50 | -8.615850e-47 |
| Msa0046680 | Msa1414340 | 0.822734 | 2.021548e-53 | -8.615850e-47 |
| Msa0059420 | Msa1414340 | 0.812263 | 4.629584e-51 | -8.615850e-47 |
| Msa0059880 | Msa1414340 | 0.805706 | 1.172612e-49 | -8.615850e-47 |
| Msa0064990 | Msa1414340 | 0.830989 | 2.152748e-55 | -8.615850e-47 |
| Msa0074860 | Msa1414340 | -0.803983 | 2.686590e-49 | -8.615850e-47 |
| Msa0076640 | Msa1414340 | 0.865728 | 4.785469e-65 | -8.615850e-47 |
| Msa0079840 | Msa1414340 | -0.800934 | 1.141748e-48 | -8.615850e-47 |
| Msa0081700 | Msa1414340 | -0.815916 | 7.233942e-52 | -8.615850e-47 |
| Msa0087900 | Msa1414340 | 0.830469 | 2.885989e-55 | -8.615850e-47 |
| Msa0092220 | Msa1414340 | 0.810333 | 1.214361e-50 | -8.615850e-47 |
| Msa0099090 | Msa1414340 | -0.834239 | 3.362404e-56 | -8.615850e-47 |
| Msa1344870 | Msa1414340 | -0.825126 | 5.555139e-54 | -8.615850e-47 |
| Msa1344930 | Msa1414340 | 0.860423 | 2.086499e-63 | -8.615850e-47 |
| Msa1356100 | Msa1414340 | -0.808429 | 3.111391e-50 | -8.615850e-47 |
| Msa1363310 | Msa1414340 | -0.809497 | 1.837834e-50 | -8.615850e-47 |
| Msa1371540 | Msa1414340 | -0.807055 | 6.091604e-50 | -8.615850e-47 |
| Msa1372470 | Msa1414340 | -0.802304 | 5.978678e-49 | -8.615850e-47 |
| Msa1373310 | Msa1414340 | -0.804939 | 1.698177e-49 | -8.615850e-47 |
| Msa1373990 | Msa1414340 | 0.883663 | 3.709216e-71 | -8.615850e-47 |
| Msa1375640 | Msa1414340 | 0.831558 | 1.559111e-55 | -8.615850e-47 |
| Msa1375980 | Msa1414340 | -0.802769 | 4.794271e-49 | -8.615850e-47 |
| Msa1376520 | Msa1414340 | 0.819740 | 9.910529e-53 | -8.615850e-47 |
| Msa1377980 | Msa1414340 | -0.815701 | 8.077442e-52 | -8.615850e-47 |
| Msa1381300 | Msa1414340 | -0.801672 | 8.064078e-49 | -8.615850e-47 |
| Msa1382100 | Msa1414340 | -0.801497 | 8.757821e-49 | -8.615850e-47 |
| Msa1383790 | Msa1414340 | 0.805364 | 1.383198e-49 | -8.615850e-47 |
| Msa1384410 | Msa1414340 | -0.820236 | 7.631682e-53 | -8.615850e-47 |
| Msa1384970 | Msa1414340 | -0.809809 | 1.574638e-50 | -8.615850e-47 |
| Msa1386580 | Msa1414340 | -0.810848 | 9.398872e-51 | -8.615850e-47 |
| Msa1387610 | Msa1414340 | 0.814487 | 1.502925e-51 | -8.615850e-47 |
| Msa1392570 | Msa1414340 | -0.809861 | 1.534790e-50 | -8.615850e-47 |
| Msa1398120 | Msa1414340 | 0.834343 | 3.166442e-56 | -8.615850e-47 |
| Msa1402300 | Msa1414340 | 0.810471 | 1.134118e-50 | -8.615850e-47 |
| Msa1408280 | Msa1414340 | -0.813601 | 2.357348e-51 | -8.615850e-47 |
| Msa1410500 | Msa1414340 | -0.806141 | 9.500123e-50 | -8.615850e-47 |
| Msa1414340 | Msa1429190 | 0.820442 | 6.843960e-53 | -8.615850e-47 |
| Msa1414340 | Msa1433060 | -0.802995 | 4.305809e-49 | -8.615850e-47 |
| Msa1414340 | Msa1449470 | 0.817360 | 3.434110e-52 | -8.615850e-47 |
| Msa1414340 | Msa1459130 | -0.819011 | 1.452831e-52 | -8.615850e-47 |
| Msa1414340 | Msa1459920 | 0.815389 | 9.477376e-52 | -8.615850e-47 |
| Msa1414340 | Msa1459930 | 0.830228 | 3.304393e-55 | -8.615850e-47 |
| Msa1414340 | Msa1464470 | -0.804506 | 2.090904e-49 | -8.615850e-47 |
| Msa1414340 | Msa1466530 | 0.829248 | 5.725032e-55 | -8.615850e-47 |
| Msa0609460 | Msa1414340 | 0.807342 | 5.296888e-50 | -8.615850e-47 |
| Msa0612580 | Msa1414340 | 0.841911 | 3.564181e-58 | -8.615850e-47 |
| Msa0614060 | Msa1414340 | -0.808913 | 2.451370e-50 | -8.615850e-47 |
| Msa0614290 | Msa1414340 | 0.813226 | 2.848930e-51 | -8.615850e-47 |
| Msa0616890 | Msa1414340 | -0.811456 | 6.937160e-51 | -8.615850e-47 |
| Msa0617470 | Msa1414340 | -0.853013 | 3.162280e-61 | -8.615850e-47 |
| Msa0619670 | Msa1414340 | 0.800781 | 1.226742e-48 | -8.615850e-47 |
| Msa0633630 | Msa1414340 | 0.827507 | 1.505785e-54 | -8.615850e-47 |
| Msa0635070 | Msa1414340 | -0.808995 | 2.354478e-50 | -8.615850e-47 |
| Msa0636770 | Msa1414340 | 0.804236 | 2.380318e-49 | -8.615850e-47 |
| Msa0638550 | Msa1414340 | -0.813059 | 3.100754e-51 | -8.615850e-47 |
| Msa0638810 | Msa1414340 | 0.808611 | 2.845053e-50 | -8.615850e-47 |
| Msa0638820 | Msa1414340 | 0.823433 | 1.388929e-53 | -8.615850e-47 |
| Msa0651820 | Msa1414340 | 0.826622 | 2.451501e-54 | -8.615850e-47 |
| Msa0652610 | Msa1414340 | 0.818960 | 1.492291e-52 | -8.615850e-47 |
| Msa0654400 | Msa1414340 | -0.806672 | 7.341507e-50 | -8.615850e-47 |
| Msa0657340 | Msa1414340 | 0.817792 | 2.744074e-52 | -8.615850e-47 |
| Msa0663580 | Msa1414340 | -0.802199 | 6.282989e-49 | -8.615850e-47 |
| Msa0672090 | Msa1414340 | 0.856016 | 4.276212e-62 | -8.615850e-47 |
| Msa0672950 | Msa1414340 | 0.811056 | 8.474549e-51 | -8.615850e-47 |
| Msa0672980 | Msa1414340 | 0.809147 | 2.184223e-50 | -8.615850e-47 |
| Msa0695630 | Msa1414340 | 0.846815 | 1.712996e-59 | -8.615850e-47 |
| Msa0697510 | Msa1414340 | 0.834431 | 3.010141e-56 | -8.615850e-47 |
| Msa0697520 | Msa1414340 | 0.834525 | 2.849979e-56 | -8.615850e-47 |
| Msa0698110 | Msa1414340 | 0.820604 | 6.281986e-53 | -8.615850e-47 |
| Msa0700250 | Msa1414340 | -0.850993 | 1.185364e-60 | -8.615850e-47 |
| Msa0701430 | Msa1414340 | 0.837433 | 5.212353e-57 | -8.615850e-47 |
| Msa0701800 | Msa1414340 | -0.813880 | 2.045809e-51 | -8.615850e-47 |
| Msa0702020 | Msa1414340 | -0.821738 | 3.441309e-53 | -8.615850e-47 |
| Msa0705520 | Msa1414340 | 0.815773 | 7.784103e-52 | -8.615850e-47 |
| Msa0738680 | Msa1414340 | 0.801289 | 9.658914e-49 | -8.615850e-47 |
| Msa0741170 | Msa1414340 | 0.839263 | 1.759592e-57 | -8.615850e-47 |
| Msa0744540 | Msa1414340 | 0.804703 | 1.902191e-49 | -8.615850e-47 |
| Msa0744550 | Msa1414340 | 0.812486 | 4.138457e-51 | -8.615850e-47 |
| Msa0744560 | Msa1414340 | 0.829109 | 6.184905e-55 | -8.615850e-47 |
| Msa0750490 | Msa1414340 | -0.823881 | 1.090656e-53 | -8.615850e-47 |
| Msa0789220 | Msa1414340 | 0.807518 | 4.861981e-50 | -8.615850e-47 |
| Msa0794100 | Msa1414340 | 0.802535 | 5.357291e-49 | -8.615850e-47 |
| Msa0795320 | Msa1414340 | 0.821742 | 3.433697e-53 | -8.615850e-47 |
| Msa0819150 | Msa1414340 | 0.805760 | 1.142425e-49 | -8.615850e-47 |
| Msa0826360 | Msa1414340 | 0.841202 | 5.482039e-58 | -8.615850e-47 |
| Msa0826370 | Msa1414340 | 0.826946 | 2.052433e-54 | -8.615850e-47 |
| Msa0826380 | Msa1414340 | 0.805002 | 1.647231e-49 | -8.615850e-47 |
| Msa0826450 | Msa1414340 | 0.821778 | 3.369608e-53 | -8.615850e-47 |
| Msa0829250 | Msa1414340 | -0.801317 | 9.533123e-49 | -8.615850e-47 |
| Msa0829770 | Msa1414340 | -0.825881 | 3.680898e-54 | -8.615850e-47 |
| Msa0127220 | Msa1414340 | -0.824860 | 6.419950e-54 | -8.615850e-47 |
| Msa0127350 | Msa1414340 | -0.801008 | 1.102441e-48 | -8.615850e-47 |
| Msa0127910 | Msa1414340 | -0.843763 | 1.147469e-58 | -8.615850e-47 |
| Msa0134270 | Msa1414340 | 0.804898 | 1.731578e-49 | -8.615850e-47 |
| Msa0134570 | Msa1414340 | 0.811182 | 7.956747e-51 | -8.615850e-47 |
| Msa0140270 | Msa1414340 | 0.801647 | 8.158488e-49 | -8.615850e-47 |
| Msa0143640 | Msa1414340 | 0.810163 | 1.321146e-50 | -8.615850e-47 |
| Msa0146210 | Msa1414340 | 0.883318 | 4.964298e-71 | -8.615850e-47 |
| Msa0148000 | Msa1414340 | -0.813805 | 2.125256e-51 | -8.615850e-47 |
| Msa0150910 | Msa1414340 | 0.820831 | 5.572211e-53 | -8.615850e-47 |
| Msa0159240 | Msa1414340 | -0.803145 | 4.008633e-49 | -8.615850e-47 |
| Msa0164560 | Msa1414340 | 0.808415 | 3.132985e-50 | -8.615850e-47 |
| Msa0165820 | Msa1414340 | -0.806112 | 9.634724e-50 | -8.615850e-47 |
| Msa0168010 | Msa1414340 | 0.803636 | 3.172003e-49 | -8.615850e-47 |
| Msa0174060 | Msa1414340 | -0.811012 | 8.660635e-51 | -8.615850e-47 |
| Msa0180820 | Msa1414340 | 0.805024 | 1.629800e-49 | -8.615850e-47 |
| Msa0183960 | Msa1414340 | -0.819088 | 1.395416e-52 | -8.615850e-47 |
| Msa0186400 | Msa1414340 | -0.808963 | 2.391600e-50 | -8.615850e-47 |
| Msa0216150 | Msa1414340 | -0.827797 | 1.282943e-54 | -8.615850e-47 |
| Msa0224210 | Msa1414340 | 0.859811 | 3.193746e-63 | -8.615850e-47 |
| Msa0225070 | Msa1414340 | -0.808951 | 2.406074e-50 | -8.615850e-47 |
| Msa0231850 | Msa1414340 | 0.986863 | 3.135330e-168 | -8.615850e-47 |
| Msa0232660 | Msa1414340 | -0.824943 | 6.135458e-54 | -8.615850e-47 |
| Msa0236690 | Msa1414340 | -0.800714 | 1.265912e-48 | -8.615850e-47 |
| Msa0238140 | Msa1414340 | 0.825690 | 4.085315e-54 | -8.615850e-47 |
| Msa1233090 | Msa1414340 | 0.808960 | 2.395867e-50 | -8.615850e-47 |
| Msa1236740 | Msa1414340 | -0.800312 | 1.528652e-48 | -8.615850e-47 |
| Msa1254870 | Msa1414340 | 0.802548 | 5.325360e-49 | -8.615850e-47 |
| Msa1263500 | Msa1414340 | 0.815162 | 1.064969e-51 | -8.615850e-47 |
| Msa1275220 | Msa1414340 | 0.814275 | 1.673474e-51 | -8.615850e-47 |
| Msa1299480 | Msa1414340 | 0.817201 | 3.728264e-52 | -8.615850e-47 |
| Msa1309040 | Msa1414340 | 0.800491 | 1.405685e-48 | -8.615850e-47 |
| Msa1313720 | Msa1414340 | 0.821947 | 3.079303e-53 | -8.615850e-47 |
| Msa1317740 | Msa1414340 | 0.812321 | 4.495903e-51 | -8.615850e-47 |
| Msa1320660 | Msa1414340 | -0.803252 | 3.808862e-49 | -8.615850e-47 |
| Msa1322180 | Msa1414340 | 0.812802 | 3.528654e-51 | -8.615850e-47 |
| Msa1328430 | Msa1414340 | 0.803084 | 4.126707e-49 | -8.615850e-47 |
| Msa1342360 | Msa1414340 | -0.814595 | 1.422308e-51 | -8.615850e-47 |
| Msa1343450 | Msa1414340 | -0.801119 | 1.046285e-48 | -8.615850e-47 |
| Msa0368620 | Msa1414340 | 0.824386 | 8.301001e-54 | -8.615850e-47 |
| Msa0369990 | Msa1414340 | 0.806487 | 8.033285e-50 | -8.615850e-47 |
| Msa0375030 | Msa1414340 | 0.804654 | 1.947749e-49 | -8.615850e-47 |
| Msa0378320 | Msa1414340 | 0.808818 | 2.568551e-50 | -8.615850e-47 |
| Msa0385320 | Msa1414340 | 0.803112 | 4.071782e-49 | -8.615850e-47 |
| Msa0389570 | Msa1414340 | -0.820153 | 7.971817e-53 | -8.615850e-47 |
| Msa0389710 | Msa1414340 | 0.828678 | 7.868624e-55 | -8.615850e-47 |
| Msa0390590 | Msa1414340 | -0.842037 | 3.302777e-58 | -8.615850e-47 |
| Msa0390790 | Msa1414340 | 0.864657 | 1.038647e-64 | -8.615850e-47 |
| Msa0398770 | Msa1414340 | 0.823314 | 1.480524e-53 | -8.615850e-47 |
| Msa0403740 | Msa1414340 | -0.810258 | 1.260533e-50 | -8.615850e-47 |
| Msa0412580 | Msa1414340 | -0.808031 | 3.780957e-50 | -8.615850e-47 |
| Msa0416040 | Msa1414340 | 0.803746 | 3.008587e-49 | -8.615850e-47 |
| Msa0423690 | Msa1414340 | 0.810877 | 9.261662e-51 | -8.615850e-47 |
| Msa0427660 | Msa1414340 | 0.804735 | 1.873232e-49 | -8.615850e-47 |
| Msa0430320 | Msa1414340 | 0.802723 | 4.900878e-49 | -8.615850e-47 |
| Msa0430460 | Msa1414340 | 0.803316 | 3.694013e-49 | -8.615850e-47 |
| Msa0436250 | Msa1414340 | 0.822110 | 2.822315e-53 | -8.615850e-47 |
| Msa0447360 | Msa1414340 | -0.801161 | 1.026141e-48 | -8.615850e-47 |
| Msa0449620 | Msa1414340 | 0.803835 | 2.884432e-49 | -8.615850e-47 |
| Msa0456450 | Msa1414340 | -0.813826 | 2.102796e-51 | -8.615850e-47 |
| Msa0457070 | Msa1414340 | -0.815167 | 1.062274e-51 | -8.615850e-47 |
| Msa0466850 | Msa1414340 | 0.823021 | 1.732994e-53 | -8.615850e-47 |
| Msa0470440 | Msa1414340 | 0.805821 | 1.109491e-49 | -8.615850e-47 |
| Msa0480260 | Msa1414340 | 0.819586 | 1.074761e-52 | -8.615850e-47 |
| Msa0480530 | Msa1414340 | 0.803151 | 3.996240e-49 | -8.615850e-47 |
| Msa0480540 | Msa1414340 | 0.809483 | 1.850405e-50 | -8.615850e-47 |
| Msa0480550 | Msa1414340 | 0.831913 | 1.275060e-55 | -8.615850e-47 |
| Msa1016450 | Msa1414340 | -0.825025 | 5.869078e-54 | -8.615850e-47 |
| Msa1018210 | Msa1414340 | -0.847990 | 8.147724e-60 | -8.615850e-47 |
| Msa1025440 | Msa1414340 | -0.805559 | 1.258880e-49 | -8.615850e-47 |
| Msa1035050 | Msa1414340 | 0.806273 | 8.912917e-50 | -8.615850e-47 |
| Msa1037360 | Msa1414340 | 0.809980 | 1.446574e-50 | -8.615850e-47 |
| Msa1039150 | Msa1414340 | -0.812953 | 3.270375e-51 | -8.615850e-47 |
| Msa1057940 | Msa1414340 | -0.820356 | 7.162777e-53 | -8.615850e-47 |
| Msa1082080 | Msa1414340 | 0.813354 | 2.670095e-51 | -8.615850e-47 |
| Msa1088000 | Msa1414340 | -0.808531 | 2.959130e-50 | -8.615850e-47 |
| Msa1090020 | Msa1414340 | -0.808198 | 3.484827e-50 | -8.615850e-47 |
| Msa1104020 | Msa1414340 | -0.830000 | 3.756940e-55 | -8.615850e-47 |
| Msa0242720 | Msa1414340 | 0.803761 | 2.987573e-49 | -8.615850e-47 |
| Msa0246140 | Msa1414340 | 0.841816 | 3.778075e-58 | -8.615850e-47 |
| Msa0269660 | Msa1414340 | -0.802111 | 6.551493e-49 | -8.615850e-47 |
| Msa0269710 | Msa1414340 | 0.811644 | 6.316068e-51 | -8.615850e-47 |
| Msa0271300 | Msa1414340 | 0.928488 | 2.690584e-92 | -8.615850e-47 |
| Msa0284730 | Msa1414340 | 0.807623 | 4.616786e-50 | -8.615850e-47 |
| Msa0294200 | Msa1414340 | 0.834852 | 2.357953e-56 | -8.615850e-47 |
| Msa0303900 | Msa1414340 | 0.821564 | 3.775265e-53 | -8.615850e-47 |
| Msa0304350 | Msa1414340 | -0.802414 | 5.674344e-49 | -8.615850e-47 |
| Msa0305910 | Msa1414340 | -0.803135 | 4.027234e-49 | -8.615850e-47 |
| Msa0309920 | Msa1414340 | 0.929891 | 3.621189e-93 | -8.615850e-47 |
| Msa0310260 | Msa1414340 | -0.804594 | 2.004420e-49 | -8.615850e-47 |
| Msa0324810 | Msa1414340 | 0.809854 | 1.539831e-50 | -8.615850e-47 |
| Msa0340370 | Msa1414340 | 0.828543 | 8.482281e-55 | -8.615850e-47 |
| Msa0364030 | Msa1414340 | -0.809834 | 1.555202e-50 | -8.615850e-47 |
| Msa1111650 | Msa1414340 | 0.800785 | 1.224323e-48 | -8.615850e-47 |
| Msa1112210 | Msa1414340 | -0.808376 | 3.192406e-50 | -8.615850e-47 |
| Msa1120560 | Msa1414340 | 0.818050 | 2.399969e-52 | -8.615850e-47 |
| Msa1121720 | Msa1414340 | -0.809428 | 1.901388e-50 | -8.615850e-47 |
| Msa1123000 | Msa1414340 | 0.811758 | 5.964884e-51 | -8.615850e-47 |
| Msa1123440 | Msa1414340 | -0.801203 | 1.006032e-48 | -8.615850e-47 |
| Msa1138110 | Msa1414340 | 0.804100 | 2.540156e-49 | -8.615850e-47 |
| Msa1142390 | Msa1414340 | 0.810792 | 9.665683e-51 | -8.615850e-47 |
| Msa1147600 | Msa1414340 | -0.802422 | 5.653713e-49 | -8.615850e-47 |
| Msa1157200 | Msa1414340 | 0.813716 | 2.223314e-51 | -8.615850e-47 |
| Msa1162430 | Msa1414340 | 0.806333 | 8.655867e-50 | -8.615850e-47 |
| Msa1164230 | Msa1414340 | 0.812606 | 3.895563e-51 | -8.615850e-47 |
| Msa1174280 | Msa1414340 | 0.829924 | 3.921089e-55 | -8.615850e-47 |
| Msa1177360 | Msa1414340 | -0.820899 | 5.375562e-53 | -8.615850e-47 |
| Msa1177650 | Msa1414340 | 0.802091 | 6.613080e-49 | -8.615850e-47 |
| Msa1199540 | Msa1414340 | -0.805572 | 1.251271e-49 | -8.615850e-47 |
| Msa1202110 | Msa1414340 | 0.802781 | 4.767138e-49 | -8.615850e-47 |
| Msa1205270 | Msa1414340 | -0.816647 | 4.964530e-52 | -8.615850e-47 |
| Msa1211610 | Msa1414340 | 0.809870 | 1.528114e-50 | -8.615850e-47 |
| Msa1214960 | Msa1414340 | 0.806248 | 9.021927e-50 | -8.615850e-47 |
| Msa1223560 | Msa1414340 | 0.818535 | 1.863619e-52 | -8.615850e-47 |
| Msa0483090 | Msa1414340 | -0.810069 | 1.384688e-50 | -8.615850e-47 |
| Msa0493870 | Msa1414340 | 0.808411 | 3.138988e-50 | -8.615850e-47 |
| Msa0500440 | Msa1414340 | 0.808296 | 3.321039e-50 | -8.615850e-47 |
| Msa0508160 | Msa1414340 | 0.856364 | 3.383195e-62 | -8.615850e-47 |
| Msa0513670 | Msa1414340 | 0.823258 | 1.526088e-53 | -8.615850e-47 |
| Msa0518490 | Msa1414340 | 0.808271 | 3.362180e-50 | -8.615850e-47 |
| Msa0525460 | Msa1414340 | 0.807277 | 5.468861e-50 | -8.615850e-47 |
| Msa0526520 | Msa1414340 | -0.809284 | 2.041431e-50 | -8.615850e-47 |
| Msa0537210 | Msa1414340 | 0.842482 | 2.516834e-58 | -8.615850e-47 |
| Msa0538050 | Msa1414340 | -0.808438 | 3.096956e-50 | -8.615850e-47 |
| Msa0548790 | Msa1414340 | 0.812128 | 4.954751e-51 | -8.615850e-47 |
| Msa0557440 | Msa1414340 | -0.801618 | 8.270977e-49 | -8.615850e-47 |
| Msa0558010 | Msa1414340 | -0.819337 | 1.224475e-52 | -8.615850e-47 |
| Msa0560280 | Msa1414340 | 0.845566 | 3.749654e-59 | -8.615850e-47 |
| Msa0563230 | Msa1414340 | -0.840231 | 9.847024e-58 | -8.615850e-47 |
| Msa0565180 | Msa1414340 | 0.828498 | 8.694826e-55 | -8.615850e-47 |
| Msa0566930 | Msa1414340 | 0.800123 | 1.670290e-48 | -8.615850e-47 |
| Msa0571900 | Msa1414340 | -0.809711 | 1.653268e-50 | -8.615850e-47 |
| Msa0572730 | Msa1414340 | -0.809508 | 1.828112e-50 | -8.615850e-47 |
| Msa0573940 | Msa1414340 | -0.800088 | 1.698343e-48 | -8.615850e-47 |
| Msa0580210 | Msa1414340 | 0.819179 | 1.330665e-52 | -8.615850e-47 |
| Msa0580890 | Msa1414340 | -0.804863 | 1.761386e-49 | -8.615850e-47 |
| Msa0582270 | Msa1414340 | -0.802842 | 4.631119e-49 | -8.615850e-47 |
| Msa0584370 | Msa1414340 | 0.813311 | 2.728806e-51 | -8.615850e-47 |
| Msa0585720 | Msa1414340 | -0.810464 | 1.138028e-50 | -8.615850e-47 |
| Msa0593600 | Msa1414340 | 0.822545 | 2.236772e-53 | -8.615850e-47 |
| Msa0855260 | Msa1414340 | 0.800428 | 1.447759e-48 | -8.615850e-47 |
| Msa0861820 | Msa1414340 | 0.830428 | 2.953104e-55 | -8.615850e-47 |
| Msa0865810 | Msa1414340 | 0.827465 | 1.541307e-54 | -8.615850e-47 |
| Msa0865820 | Msa1414340 | 0.800569 | 1.355008e-48 | -8.615850e-47 |
| Msa0865830 | Msa1414340 | 0.844301 | 8.228692e-59 | -8.615850e-47 |
| Msa0869320 | Msa1414340 | -0.803079 | 4.135913e-49 | -8.615850e-47 |
| Msa0896920 | Msa1414340 | 0.800587 | 1.343731e-48 | -8.615850e-47 |
| Msa0914710 | Msa1414340 | 0.841099 | 5.836125e-58 | -8.615850e-47 |
| Msa0921790 | Msa1414340 | 0.818726 | 1.686698e-52 | -8.615850e-47 |
| Msa0934290 | Msa1414340 | -0.820397 | 7.007860e-53 | -8.615850e-47 |
| Msa0940780 | Msa1414340 | 0.804734 | 1.873581e-49 | -8.615850e-47 |
| Msa0944470 | Msa1414340 | 0.817113 | 3.902559e-52 | -8.615850e-47 |
| Msa0945320 | Msa1414340 | 0.816941 | 4.265983e-52 | -8.615850e-47 |
| Msa0947520 | Msa1414340 | 0.839775 | 1.294980e-57 | -8.615850e-47 |
| Msa0947550 | Msa1414340 | -0.808109 | 3.639264e-50 | -8.615850e-47 |
| Msa0956600 | Msa1414340 | -0.824091 | 9.736613e-54 | -8.615850e-47 |
| Msa0960580 | Msa1414340 | 0.802099 | 6.588177e-49 | -8.615850e-47 |
| Msa0971780 | Msa1414340 | -0.819836 | 9.419661e-53 | -8.615850e-47 |
| Msa0975950 | Msa1414340 | 0.801217 | 9.992508e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414340 | MtrunA17_Chr2g0278581 | 88.304 | 342 | 5 | 1 | 1 | 307 | 1 | 342 | 0.0 | 608 |
| Msa1414340 | MtrunA17_Chr6g0463901 | 75.821 | 335 | 46 | 1 | 1 | 300 | 1 | 335 | 0.0 | 521 |
| Msa1414340 | MtrunA17_Chr7g0241071 | 51.961 | 306 | 130 | 1 | 12 | 300 | 106 | 411 | 1.36e-108 | 322 |
| Msa1414340 | MtrunA17_Chr4g0049821 | 44.906 | 265 | 131 | 4 | 39 | 296 | 127 | 383 | 1.66e-72 | 229 |
| Msa1414340 | MtrunA17_Chr3g0113101 | 31.071 | 280 | 172 | 8 | 32 | 306 | 116 | 379 | 3.37e-23 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414340 | AT1G43670.1 | 71.681 | 339 | 61 | 1 | 1 | 304 | 1 | 339 | 3.18e-180 | 501 |
| Msa1414340 | AT3G54050.2 | 51.974 | 304 | 131 | 2 | 12 | 300 | 114 | 417 | 3.38e-108 | 321 |
| Msa1414340 | AT3G54050.1 | 51.974 | 304 | 131 | 2 | 12 | 300 | 114 | 417 | 3.38e-108 | 321 |
| Msa1414340 | AT5G64380.1 | 44.528 | 265 | 132 | 5 | 39 | 296 | 133 | 389 | 2.38e-71 | 226 |
| Msa1414340 | AT3G55800.1 | 31.429 | 280 | 165 | 10 | 32 | 303 | 123 | 383 | 3.20e-23 | 99.0 |
Find 65 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATAAATCTTTCCTTTCTT+TGG | 0.198088 | tig0024111:-26613 | Msa1414340:intergenic |
| CACTATTGCATATAGATCTT+TGG | 0.249832 | tig0024111:+26120 | Msa1414340:intron |
| ACTGACTTGCCACGCTGTGC+TGG | 0.263816 | tig0024111:-25856 | Msa1414340:intergenic |
| CTTACCTTAGCTTTCCATTT+GGG | 0.275310 | tig0024111:-27013 | Msa1414340:intergenic |
| CATAGTTGTGTTTGATCCTT+TGG | 0.288689 | tig0024111:+25967 | Msa1414340:CDS |
| CCAAAGTCTCTTAGGTATAT+TGG | 0.298619 | tig0024111:+26830 | Msa1414340:CDS |
| TATGCAGAATCCAAAGAAAA+TGG | 0.326692 | tig0024111:+27800 | Msa1414340:CDS |
| TGTGCGTCCGCTGCTGATTA+AGG | 0.328499 | tig0024111:-25653 | Msa1414340:intergenic |
| ATTGATTGTGGAGTTTCAAT+AGG | 0.341565 | tig0024111:+26004 | Msa1414340:CDS |
| CACCATATAGCAATGTTCTA+TGG | 0.354552 | tig0024111:-26959 | Msa1414340:intergenic |
| TCTTACCTTAGCTTTCCATT+TGG | 0.373307 | tig0024111:-27014 | Msa1414340:intergenic |
| GTTCACCACCAAAGTCTCTT+AGG | 0.374034 | tig0024111:+26822 | Msa1414340:CDS |
| CTGACTTGCCACGCTGTGCT+GGG | 0.376754 | tig0024111:-25855 | Msa1414340:intergenic |
| TCGTAGCTTCCAAGGAATAT+TGG | 0.381749 | tig0024111:-27752 | Msa1414340:intergenic |
| AATGCATGTACCTTGATGTT+TGG | 0.391145 | tig0024111:-26486 | Msa1414340:intergenic |
| TTTGTGCTTAGCACAGGAAA+TGG | 0.404030 | tig0024111:+26411 | Msa1414340:CDS |
| ATGCATGTACCTTGATGTTT+GGG | 0.428381 | tig0024111:-26485 | Msa1414340:intergenic |
| TTTACACTTGATCCTTCCCT+TGG | 0.433839 | tig0024111:+26444 | Msa1414340:CDS |
| AAAGATTTATTCTGTGAATG+AGG | 0.439092 | tig0024111:+26624 | Msa1414340:CDS |
| GTCCATAGAACATTGCTATA+TGG | 0.440321 | tig0024111:+26957 | Msa1414340:CDS |
| CCAATATACCTAAGAGACTT+TGG | 0.448075 | tig0024111:-26830 | Msa1414340:intergenic |
| GCAGCTGGTTACTGCATGTA+TGG | 0.456073 | tig0024111:+26213 | Msa1414340:CDS |
| CTGATTTGATGACAATAACT+AGG | 0.457076 | tig0024111:+24506 | Msa1414340:CDS |
| AGCACAGGAAATGGAGTGAA+TGG | 0.467256 | tig0024111:+26420 | Msa1414340:CDS |
| AACAAAACTCACTTGAACAT+TGG | 0.470224 | tig0024111:-24795 | Msa1414340:intergenic |
| ATTGCAACCTGGGAGCAGTT+TGG | 0.473530 | tig0024111:+26188 | Msa1414340:CDS |
| AACTCCACAATCAATGTTTG+AGG | 0.474075 | tig0024111:-25996 | Msa1414340:intergenic |
| TGACTTGCCACGCTGTGCTG+GGG | 0.480596 | tig0024111:-25854 | Msa1414340:intergenic |
| GATCGATCGCCAATATTCCT+TGG | 0.483711 | tig0024111:+27743 | Msa1414340:CDS |
| GCTGATAAGAAAAGCCCAAA+TGG | 0.486498 | tig0024111:+26999 | Msa1414340:CDS |
| GGGAGCAGTTTGGTAGCAGC+TGG | 0.487734 | tig0024111:+26198 | Msa1414340:CDS |
| TGGTGTCTCCAGCAAGTCCT+AGG | 0.492171 | tig0024111:-24775 | Msa1414340:intergenic |
| TCCAAAACTTACTTGGCCGT+TGG | 0.497852 | tig0024111:-26670 | Msa1414340:intergenic |
| AAGATTTATTCTGTGAATGA+GGG | 0.501287 | tig0024111:+26625 | Msa1414340:CDS |
| TTGCAGTTTGTGCTTAGCAC+AGG | 0.508953 | tig0024111:+26405 | Msa1414340:intron |
| GTTGAAGATGCATTGCAACC+TGG | 0.510015 | tig0024111:+26177 | Msa1414340:CDS |
| GTGCCTTCTTGTTTCAGAAG+AGG | 0.512489 | tig0024111:+25810 | Msa1414340:intron |
| CAGTTCTGTTAGCATCTGCT+TGG | 0.515272 | tig0024111:-24486 | Msa1414340:intergenic |
| TTGAAGATGCATTGCAACCT+GGG | 0.517948 | tig0024111:+26178 | Msa1414340:CDS |
| TTCTAATGAAGTATTTGTGA+AGG | 0.533564 | tig0024111:+25630 | Msa1414340:CDS |
| GTTGTGTTTGATCCTTTGGA+TGG | 0.544716 | tig0024111:+25971 | Msa1414340:CDS |
| CAATTTCATCGTAGCTTCCA+AGG | 0.546062 | tig0024111:-27760 | Msa1414340:intergenic |
| GACTTGCCACGCTGTGCTGG+GGG | 0.552070 | tig0024111:-25853 | Msa1414340:intergenic |
| TGCTCCATCAAATATGACAT+TGG | 0.555129 | tig0024111:-27394 | Msa1414340:intergenic |
| GGTTCCTCAAACATTGATTG+TGG | 0.568496 | tig0024111:+25992 | Msa1414340:CDS |
| TCATATTTGATGGAGCAAGC+AGG | 0.570588 | tig0024111:+27400 | Msa1414340:CDS |
| GAGTCAATATGAACTCTCCA+AGG | 0.570901 | tig0024111:-26461 | Msa1414340:intergenic |
| ACTTCATAGATACCAAAGAA+AGG | 0.574423 | tig0024111:+26601 | Msa1414340:intron |
| AGCTTTCACAGGAAAACAAA+GGG | 0.576524 | tig0024111:+27429 | Msa1414340:CDS |
| GCAGGAGGTCAAGCTTTCAC+AGG | 0.578987 | tig0024111:+27418 | Msa1414340:CDS |
| AGTCTCTTAGGTATATTGGC+AGG | 0.582669 | tig0024111:+26834 | Msa1414340:CDS |
| CAACCTCTTCTGAAACAAGA+AGG | 0.591219 | tig0024111:-25813 | Msa1414340:intergenic |
| CATGTATGGAAGCTCTTGCA+CGG | 0.591600 | tig0024111:+26227 | Msa1414340:CDS |
| AAAGCCCAAATGGAAAGCTA+AGG | 0.593648 | tig0024111:+27009 | Msa1414340:CDS |
| TTTGGTGGTGAACTGTCTTG+TGG | 0.594367 | tig0024111:-26812 | Msa1414340:intergenic |
| GCTGCTACCAAACTGCTCCC+AGG | 0.598305 | tig0024111:-26195 | Msa1414340:intergenic |
| ATTGACTCACCCAAACATCA+AGG | 0.604776 | tig0024111:+26476 | Msa1414340:CDS |
| CATAGAACATTGCTATATGG+TGG | 0.610102 | tig0024111:+26960 | Msa1414340:CDS |
| AATATGAACTCTCCAAGGGA+AGG | 0.611205 | tig0024111:-26456 | Msa1414340:intergenic |
| AAGCTTTCACAGGAAAACAA+AGG | 0.624169 | tig0024111:+27428 | Msa1414340:CDS |
| GTGAAGGCCTTAATCAGCAG+CGG | 0.626415 | tig0024111:+25646 | Msa1414340:CDS |
| ATATACCTAAGAGACTTTGG+TGG | 0.639800 | tig0024111:-26827 | Msa1414340:intergenic |
| AGTCAATATGAACTCTCCAA+GGG | 0.668311 | tig0024111:-26460 | Msa1414340:intergenic |
| ATGTTTGAGGAACCATCCAA+AGG | 0.670132 | tig0024111:-25983 | Msa1414340:intergenic |
| TATTTGATGGAGCAAGCAGG+AGG | 0.695622 | tig0024111:+27403 | Msa1414340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTAATATGAGTTTAA+TGG | + | tig0024111:24954-24973 | Msa1414340:intron | 10.0% |
| !! | AAGAAAAAAAAAATTTGAAA+TGG | + | tig0024111:25384-25403 | Msa1414340:intron | 10.0% |
| !!! | TTGATAAATATAGAATATTT+TGG | - | tig0024111:25883-25902 | Msa1414340:intergenic | 10.0% |
| !! | TAAATTAACATATAGTTATT+AGG | + | tig0024111:26531-26550 | Msa1414340:intron | 10.0% |
| !!! | ACAATATTAAATGGATTTAA+AGG | - | tig0024111:25122-25141 | Msa1414340:intergenic | 15.0% |
| !! | GTTGAAAATACAATATTAAA+TGG | - | tig0024111:25131-25150 | Msa1414340:intergenic | 15.0% |
| !!! | TAATTCATATGCATTTTATT+TGG | + | tig0024111:25740-25759 | Msa1414340:intron | 15.0% |
| !! | ATGTTTAAACTAATAACTTA+TGG | + | tig0024111:27325-27344 | Msa1414340:intron | 15.0% |
| !! | CACGTAACATTATAAATTAA+AGG | - | tig0024111:24835-24854 | Msa1414340:intergenic | 20.0% |
| !! | AGTATTATTTCAGATTTAGA+TGG | - | tig0024111:24916-24935 | Msa1414340:intergenic | 20.0% |
| !! | TAGAAATTACTACTATGATA+TGG | - | tig0024111:25032-25051 | Msa1414340:intergenic | 20.0% |
| !!! | CACTCTAATTCATTTTTATA+AGG | - | tig0024111:25060-25079 | Msa1414340:intergenic | 20.0% |
| !! | CTTATAAAAATGAATTAGAG+TGG | + | tig0024111:25058-25077 | Msa1414340:intron | 20.0% |
| !!! | AAATCGAATTTAAAGCTAAT+TGG | - | tig0024111:25211-25230 | Msa1414340:intergenic | 20.0% |
| !!! | AGGAATTCAAGTATTTTAAA+GGG | - | tig0024111:25289-25308 | Msa1414340:intergenic | 20.0% |
| !!! | AAGGAATTCAAGTATTTTAA+AGG | - | tig0024111:25290-25309 | Msa1414340:intergenic | 20.0% |
| !!! | CTTTATTTTGTTCTTTTTGT+TGG | + | tig0024111:25699-25718 | Msa1414340:intron | 20.0% |
| !!! | AAATTGCATTTTACTAAATC+AGG | - | tig0024111:25778-25797 | Msa1414340:intergenic | 20.0% |
| !!! | TAAAATGCAATTTTTTGCTT+TGG | + | tig0024111:25785-25804 | Msa1414340:intron | 20.0% |
| !! | TAACATTCTATTAGCATAAT+CGG | - | tig0024111:26264-26283 | Msa1414340:intergenic | 20.0% |
| !!! | TAGTTATTAGGTTTTTACTT+AGG | + | tig0024111:26543-26562 | Msa1414340:intron | 20.0% |
| !! | AATAAAATGAAGAAACTTGA+AGG | - | tig0024111:26899-26918 | Msa1414340:intergenic | 20.0% |
| !! | AAATTTGACTGTAAATTATC+AGG | + | tig0024111:27353-27372 | Msa1414340:intron | 20.0% |
| !! | AATTTGACTGTAAATTATCA+GGG | + | tig0024111:27354-27373 | Msa1414340:intron | 20.0% |
| !! | ACGATTAAATAACTGATATA+AGG | - | tig0024111:27631-27650 | Msa1414340:intergenic | 20.0% |
| ! | AAACTGAAACATTCAATCAA+TGG | - | tig0024111:24725-24744 | Msa1414340:intergenic | 25.0% |
| !!! | TTTCAGTTTTTTTTACTGAC+AGG | + | tig0024111:24736-24755 | Msa1414340:intron | 25.0% |
| ! | TCACACAAAAAAGATTTAGA+TGG | - | tig0024111:24885-24904 | Msa1414340:intergenic | 25.0% |
| ! | AACTTGATGTAATAGAGATA+AGG | + | tig0024111:25250-25269 | Msa1414340:intron | 25.0% |
| ! | TGAGTGTGTAATTAAATTCA+AGG | - | tig0024111:25309-25328 | Msa1414340:intergenic | 25.0% |
| ! | CCAAGTATTATAAGTTTCTA+TGG | - | tig0024111:25481-25500 | Msa1414340:intergenic | 25.0% |
| ! | CCATAGAAACTTATAATACT+TGG | + | tig0024111:25478-25497 | Msa1414340:intron | 25.0% |
| ! | TAGTGGTGAATAGAAAAATA+GGG | - | tig0024111:25575-25594 | Msa1414340:intergenic | 25.0% |
| ! | ATAGTGGTGAATAGAAAAAT+AGG | - | tig0024111:25576-25595 | Msa1414340:intergenic | 25.0% |
| ! | TTTCTATTCACCACTATTTA+AGG | + | tig0024111:25579-25598 | Msa1414340:intron | 25.0% |
| ! | TTCTATTCACCACTATTTAA+GGG | + | tig0024111:25580-25599 | Msa1414340:intron | 25.0% |
| !! | TTCTAATGAAGTATTTGTGA+AGG | + | tig0024111:25630-25649 | Msa1414340:CDS | 25.0% |
| ! | AAAATATAGCAATCAAGCTT+GGG | - | tig0024111:26060-26079 | Msa1414340:intergenic | 25.0% |
| ! | TAAAATATAGCAATCAAGCT+TGG | - | tig0024111:26061-26080 | Msa1414340:intergenic | 25.0% |
| ! | GAATAAATCTTTCCTTTCTT+TGG | - | tig0024111:26616-26635 | Msa1414340:intergenic | 25.0% |
| ! | AAAGATTTATTCTGTGAATG+AGG | + | tig0024111:26624-26643 | Msa1414340:CDS | 25.0% |
| ! | AAGATTTATTCTGTGAATGA+GGG | + | tig0024111:26625-26644 | Msa1414340:CDS | 25.0% |
| ! | AACTTTATGTAGTTTGATCT+TGG | + | tig0024111:26869-26888 | Msa1414340:intron | 25.0% |
| !! | AATTCAGATTCCTTTTCTAT+CGG | - | tig0024111:27124-27143 | Msa1414340:intergenic | 25.0% |
| !!! | ACCTAAGGACATTTTAAAAT+CGG | + | tig0024111:27152-27171 | Msa1414340:intron | 25.0% |
| ! | ACTACATATCCCAATAATTT+AGG | - | tig0024111:27225-27244 | Msa1414340:intergenic | 25.0% |
| ! | ACATATCATATAACACAACT+CGG | - | tig0024111:27309-27328 | Msa1414340:intergenic | 25.0% |
| !! | TTTTCCAATGTCATATTTGA+TGG | + | tig0024111:27390-27409 | Msa1414340:CDS | 25.0% |
| ! | CAGTTATTTAATCGTTGAAT+TGG | + | tig0024111:27636-27655 | Msa1414340:intron | 25.0% |
| !!! | TCATACGATAATTTTTTTGC+AGG | + | tig0024111:27691-27710 | Msa1414340:intron | 25.0% |
| ! | CTGATTTGATGACAATAACT+AGG | + | tig0024111:24506-24525 | Msa1414340:CDS | 30.0% |
| AACAATGTGATTGATGAGAA+TGG | - | tig0024111:24581-24600 | Msa1414340:intergenic | 30.0% | |
| TGTTTGTTCTTCTGTTAACA+AGG | + | tig0024111:24615-24634 | Msa1414340:intron | 30.0% | |
| AACAAAACTCACTTGAACAT+TGG | - | tig0024111:24798-24817 | Msa1414340:intergenic | 30.0% | |
| GTTGGATGTTGATGTAAAAA+TGG | - | tig0024111:24992-25011 | Msa1414340:intergenic | 30.0% | |
| AAATACTTCCAAAACATGTG+CGG | + | tig0024111:25180-25199 | Msa1414340:intron | 30.0% | |
| TACATCAAGTTTGCATAAAC+CGG | - | tig0024111:25241-25260 | Msa1414340:intergenic | 30.0% | |
| ! | TTTTTCTTTCTCTAATGCAC+AGG | - | tig0024111:25372-25391 | Msa1414340:intergenic | 30.0% |
| ! | AAATGGTTTTCGCATAACTT+TGG | + | tig0024111:25401-25420 | Msa1414340:intron | 30.0% |
| TGGAAATAGAGACACTTAAA+GGG | - | tig0024111:25461-25480 | Msa1414340:intergenic | 30.0% | |
| ATGGAAATAGAGACACTTAA+AGG | - | tig0024111:25462-25481 | Msa1414340:intergenic | 30.0% | |
| ACATTTCACAAAGTTTCAAG+AGG | + | tig0024111:25527-25546 | Msa1414340:intron | 30.0% | |
| TCTATTCACCACTATTTAAG+GGG | + | tig0024111:25581-25600 | Msa1414340:intron | 30.0% | |
| ACAAAATAAAGCAAACTCGA+GGG | - | tig0024111:25690-25709 | Msa1414340:intergenic | 30.0% | |
| AACAAAATAAAGCAAACTCG+AGG | - | tig0024111:25691-25710 | Msa1414340:intergenic | 30.0% | |
| ATTGATTGTGGAGTTTCAAT+AGG | + | tig0024111:26004-26023 | Msa1414340:CDS | 30.0% | |
| CACTATTGCATATAGATCTT+TGG | + | tig0024111:26120-26139 | Msa1414340:intron | 30.0% | |
| CAATTTATTCGATCAGAATC+AGG | - | tig0024111:26378-26397 | Msa1414340:intergenic | 30.0% | |
| TTCTGATCGAATAAATTGCA+CGG | + | tig0024111:26380-26399 | Msa1414340:intron | 30.0% | |
| ACTTCATAGATACCAAAGAA+AGG | + | tig0024111:26601-26620 | Msa1414340:intron | 30.0% | |
| CAGAATTTCCAAAACTTACT+TGG | - | tig0024111:26680-26699 | Msa1414340:intergenic | 30.0% | |
| TTCATGTTAACTCAAGAATC+AGG | - | tig0024111:26723-26742 | Msa1414340:intergenic | 30.0% | |
| GAAAAATGCACAATACAGTA+TGG | + | tig0024111:26926-26945 | Msa1414340:intron | 30.0% | |
| AAATGATTCTCCGATAGAAA+AGG | + | tig0024111:27111-27130 | Msa1414340:intron | 30.0% | |
| TTAAAATGTCCTTAGGTCTT+AGG | - | tig0024111:27149-27168 | Msa1414340:intergenic | 30.0% | |
| !!! | TCCGATTTTAAAATGTCCTT+AGG | - | tig0024111:27156-27175 | Msa1414340:intergenic | 30.0% |
| GTTCGAGAACCTAAATTATT+GGG | + | tig0024111:27213-27232 | Msa1414340:intron | 30.0% | |
| !! | TATGTATGGAGTATTGCAAA+CGG | - | tig0024111:27249-27268 | Msa1414340:intergenic | 30.0% |
| TCATTTGATACTACATCTGA+TGG | + | tig0024111:27659-27678 | Msa1414340:intron | 30.0% | |
| ! | GATCGATCATGTATTTTCTT+AGG | - | tig0024111:27731-27750 | Msa1414340:intergenic | 30.0% |
| TATGCAGAATCCAAAGAAAA+TGG | + | tig0024111:27800-27819 | Msa1414340:CDS | 30.0% | |
| CTCATCAATCACATTGTTCT+TGG | + | tig0024111:24583-24602 | Msa1414340:intron | 35.0% | |
| !!! | AGTTTTTTTTACTGACAGGC+TGG | + | tig0024111:24740-24759 | Msa1414340:intron | 35.0% |
| ACTATGATATGGAAGTAGTG+TGG | - | tig0024111:25021-25040 | Msa1414340:intergenic | 35.0% | |
| CTATTCACCACTATTTAAGG+GGG | + | tig0024111:25582-25601 | Msa1414340:intron | 35.0% | |
| CATAGTTGTGTTTGATCCTT+TGG | + | tig0024111:25967-25986 | Msa1414340:CDS | 35.0% | |
| AACTCCACAATCAATGTTTG+AGG | - | tig0024111:25999-26018 | Msa1414340:intergenic | 35.0% | |
| AGTCAATATGAACTCTCCAA+GGG | - | tig0024111:26463-26482 | Msa1414340:intergenic | 35.0% | |
| ATGCATGTACCTTGATGTTT+GGG | - | tig0024111:26488-26507 | Msa1414340:intergenic | 35.0% | |
| AATGCATGTACCTTGATGTT+TGG | - | tig0024111:26489-26508 | Msa1414340:intergenic | 35.0% | |
| GCATTATGTTGCAGCTAAAT+TGG | + | tig0024111:26504-26523 | Msa1414340:intron | 35.0% | |
| ATATACCTAAGAGACTTTGG+TGG | - | tig0024111:26830-26849 | Msa1414340:intergenic | 35.0% | |
| CCAATATACCTAAGAGACTT+TGG | - | tig0024111:26833-26852 | Msa1414340:intergenic | 35.0% | |
| CCAAAGTCTCTTAGGTATAT+TGG | + | tig0024111:26830-26849 | Msa1414340:CDS | 35.0% | |
| GTCCATAGAACATTGCTATA+TGG | + | tig0024111:26957-26976 | Msa1414340:CDS | 35.0% | |
| CACCATATAGCAATGTTCTA+TGG | - | tig0024111:26962-26981 | Msa1414340:intergenic | 35.0% | |
| CATAGAACATTGCTATATGG+TGG | + | tig0024111:26960-26979 | Msa1414340:CDS | 35.0% | |
| ! | CTTACCTTAGCTTTCCATTT+GGG | - | tig0024111:27016-27035 | Msa1414340:intergenic | 35.0% |
| ! | TCTTACCTTAGCTTTCCATT+TGG | - | tig0024111:27017-27036 | Msa1414340:intergenic | 35.0% |
| GGTAAGACTGTGATATACTT+TGG | + | tig0024111:27030-27049 | Msa1414340:intron | 35.0% | |
| ACATTTGATCTAGCATCCTT+AGG | + | tig0024111:27071-27090 | Msa1414340:intron | 35.0% | |
| GGTTCGAGAACCTAAATTAT+TGG | + | tig0024111:27212-27231 | Msa1414340:intron | 35.0% | |
| !! | ATGTATGGAGTATTGCAAAC+GGG | - | tig0024111:27248-27267 | Msa1414340:intergenic | 35.0% |
| TCCATACATAGATGAGAACT+TGG | + | tig0024111:27259-27278 | Msa1414340:intron | 35.0% | |
| TGCTCCATCAAATATGACAT+TGG | - | tig0024111:27397-27416 | Msa1414340:intergenic | 35.0% | |
| AAGCTTTCACAGGAAAACAA+AGG | + | tig0024111:27428-27447 | Msa1414340:CDS | 35.0% | |
| AGCTTTCACAGGAAAACAAA+GGG | + | tig0024111:27429-27448 | Msa1414340:CDS | 35.0% | |
| TCAAAGTATGCTGAATCACG+TGG | + | tig0024111:24547-24566 | Msa1414340:intron | 40.0% | |
| ! | TTTTTACTGACAGGCTGGAT+TGG | + | tig0024111:24745-24764 | Msa1414340:intron | 40.0% |
| ! | TAAATTCGATTTGCCTCCAC+CGG | + | tig0024111:25219-25238 | Msa1414340:intron | 40.0% |
| ATCAAGTTTGCATAAACCGG+TGG | - | tig0024111:25238-25257 | Msa1414340:intergenic | 40.0% | |
| !! | CAACCTCTTCTGAAACAAGA+AGG | - | tig0024111:25816-25835 | Msa1414340:intergenic | 40.0% |
| GTTGTGTTTGATCCTTTGGA+TGG | + | tig0024111:25971-25990 | Msa1414340:CDS | 40.0% | |
| ATGTTTGAGGAACCATCCAA+AGG | - | tig0024111:25986-26005 | Msa1414340:intergenic | 40.0% | |
| ! | GGTTCCTCAAACATTGATTG+TGG | + | tig0024111:25992-26011 | Msa1414340:CDS | 40.0% |
| TTGAAGATGCATTGCAACCT+GGG | + | tig0024111:26178-26197 | Msa1414340:CDS | 40.0% | |
| TTTGTGCTTAGCACAGGAAA+TGG | + | tig0024111:26411-26430 | Msa1414340:CDS | 40.0% | |
| TTTACACTTGATCCTTCCCT+TGG | + | tig0024111:26444-26463 | Msa1414340:CDS | 40.0% | |
| AATATGAACTCTCCAAGGGA+AGG | - | tig0024111:26459-26478 | Msa1414340:intergenic | 40.0% | |
| GAGTCAATATGAACTCTCCA+AGG | - | tig0024111:26464-26483 | Msa1414340:intergenic | 40.0% | |
| ! | ATTGACTCACCCAAACATCA+AGG | + | tig0024111:26476-26495 | Msa1414340:CDS | 40.0% |
| CAAAAACTGGGATGAACCAA+CGG | + | tig0024111:26654-26673 | Msa1414340:CDS | 40.0% | |
| AGTCTCTTAGGTATATTGGC+AGG | + | tig0024111:26834-26853 | Msa1414340:CDS | 40.0% | |
| ! | TTGGGCTTTTCTTATCAGCA+GGG | - | tig0024111:26998-27017 | Msa1414340:intergenic | 40.0% |
| ! | TTTGGGCTTTTCTTATCAGC+AGG | - | tig0024111:26999-27018 | Msa1414340:intergenic | 40.0% |
| GCTGATAAGAAAAGCCCAAA+TGG | + | tig0024111:26999-27018 | Msa1414340:CDS | 40.0% | |
| AAAGCCCAAATGGAAAGCTA+AGG | + | tig0024111:27009-27028 | Msa1414340:CDS | 40.0% | |
| ATCTAGCATCCTTAGGTCTT+AGG | + | tig0024111:27078-27097 | Msa1414340:intron | 40.0% | |
| ACTAACTCTCCTAAGACCTA+AGG | - | tig0024111:27090-27109 | Msa1414340:intergenic | 40.0% | |
| CTGAATTCTCCTAAGACCTA+AGG | + | tig0024111:27137-27156 | Msa1414340:intron | 40.0% | |
| GCCAAGTTCTCATCTATGTA+TGG | - | tig0024111:27263-27282 | Msa1414340:intergenic | 40.0% | |
| TCATATTTGATGGAGCAAGC+AGG | + | tig0024111:27400-27419 | Msa1414340:CDS | 40.0% | |
| GCATCTCTGCATCTTCAATA+TGG | + | tig0024111:27534-27553 | Msa1414340:intron | 40.0% | |
| !!! | TTTTTTGCAGGCACTTGACT+TGG | + | tig0024111:27703-27722 | Msa1414340:intron | 40.0% |
| TCGTAGCTTCCAAGGAATAT+TGG | - | tig0024111:27755-27774 | Msa1414340:intergenic | 40.0% | |
| CAATTTCATCGTAGCTTCCA+AGG | - | tig0024111:27763-27782 | Msa1414340:intergenic | 40.0% | |
| CAGTTCTGTTAGCATCTGCT+TGG | - | tig0024111:24489-24508 | None:intergenic | 45.0% | |
| !! | GCTGGATTGGCAAAAATCCT+AGG | + | tig0024111:24758-24777 | Msa1414340:CDS | 45.0% |
| GCAAAAATCCTAGGACTTGC+TGG | + | tig0024111:24767-24786 | Msa1414340:CDS | 45.0% | |
| GAAGTAGTGTGGTATCTCGT+TGG | - | tig0024111:25010-25029 | Msa1414340:intergenic | 45.0% | |
| AAGTTTGCATAAACCGGTGG+AGG | - | tig0024111:25235-25254 | Msa1414340:intergenic | 45.0% | |
| TTCACCACTATTTAAGGGGG+AGG | + | tig0024111:25585-25604 | Msa1414340:intron | 45.0% | |
| ! | GTGCCTTCTTGTTTCAGAAG+AGG | + | tig0024111:25810-25829 | Msa1414340:intron | 45.0% |
| GTTGAAGATGCATTGCAACC+TGG | + | tig0024111:26177-26196 | Msa1414340:CDS | 45.0% | |
| CATGTATGGAAGCTCTTGCA+CGG | + | tig0024111:26227-26246 | Msa1414340:CDS | 45.0% | |
| TTGCAGTTTGTGCTTAGCAC+AGG | + | tig0024111:26405-26424 | Msa1414340:intron | 45.0% | |
| AGCACAGGAAATGGAGTGAA+TGG | + | tig0024111:26420-26439 | Msa1414340:CDS | 45.0% | |
| ATGAGGGAAACGCCAAAAAC+TGG | + | tig0024111:26641-26660 | Msa1414340:CDS | 45.0% | |
| TGAGGGAAACGCCAAAAACT+GGG | + | tig0024111:26642-26661 | Msa1414340:CDS | 45.0% | |
| !!! | CGTTGGTTCATCCCAGTTTT+TGG | - | tig0024111:26656-26675 | Msa1414340:intergenic | 45.0% |
| ! | ACCAACGGCCAAGTAAGTTT+TGG | + | tig0024111:26669-26688 | Msa1414340:intron | 45.0% |
| TCCAAAACTTACTTGGCCGT+TGG | - | tig0024111:26673-26692 | Msa1414340:intergenic | 45.0% | |
| !! | TTTGGTGGTGAACTGTCTTG+TGG | - | tig0024111:26815-26834 | Msa1414340:intergenic | 45.0% |
| GTTCACCACCAAAGTCTCTT+AGG | + | tig0024111:26822-26841 | Msa1414340:CDS | 45.0% | |
| TAGGTTCTCGAACCTGCTAT+GGG | - | tig0024111:27206-27225 | Msa1414340:intergenic | 45.0% | |
| TTAGGTTCTCGAACCTGCTA+TGG | - | tig0024111:27207-27226 | Msa1414340:intergenic | 45.0% | |
| TATTTGATGGAGCAAGCAGG+AGG | + | tig0024111:27403-27422 | Msa1414340:CDS | 45.0% | |
| GATCGATCGCCAATATTCCT+TGG | + | tig0024111:27743-27762 | Msa1414340:CDS | 45.0% | |
| ! | TGGTGTGTCCGCACATGTTT+TGG | - | tig0024111:25191-25210 | Msa1414340:intergenic | 50.0% |
| TGCTCCTCCCCCTTAAATAG+TGG | - | tig0024111:25592-25611 | Msa1414340:intergenic | 50.0% | |
| GGGGGAGGAGCAAAAGAAAT+TGG | + | tig0024111:25600-25619 | Msa1414340:intron | 50.0% | |
| GTGAAGGCCTTAATCAGCAG+CGG | + | tig0024111:25646-25665 | Msa1414340:CDS | 50.0% | |
| ATTGCAACCTGGGAGCAGTT+TGG | + | tig0024111:26188-26207 | Msa1414340:CDS | 50.0% | |
| GCAGCTGGTTACTGCATGTA+TGG | + | tig0024111:26213-26232 | Msa1414340:CDS | 50.0% | |
| TATGGGCCTAACTCCTGAGT+CGG | - | tig0024111:27189-27208 | Msa1414340:intergenic | 50.0% | |
| TGGTGTCTCCAGCAAGTCCT+AGG | - | tig0024111:24778-24797 | Msa1414340:intergenic | 55.0% | |
| ! | TGTGCGTCCGCTGCTGATTA+AGG | - | tig0024111:25656-25675 | Msa1414340:intergenic | 55.0% |
| !! | GGACATTTCCTTGCCGACTC+AGG | + | tig0024111:27173-27192 | Msa1414340:intron | 55.0% |
| !! | TCCTTGCCGACTCAGGAGTT+AGG | + | tig0024111:27180-27199 | Msa1414340:intron | 55.0% |
| TCAGGAGTTAGGCCCATAGC+AGG | + | tig0024111:27191-27210 | Msa1414340:intron | 55.0% | |
| GCAGGAGGTCAAGCTTTCAC+AGG | + | tig0024111:27418-27437 | Msa1414340:CDS | 55.0% | |
| ! | TGACTTGCCACGCTGTGCTG+GGG | - | tig0024111:25857-25876 | Msa1414340:intergenic | 60.0% |
| ! | CTGACTTGCCACGCTGTGCT+GGG | - | tig0024111:25858-25877 | Msa1414340:intergenic | 60.0% |
| !! | ACTGACTTGCCACGCTGTGC+TGG | - | tig0024111:25859-25878 | Msa1414340:intergenic | 60.0% |
| GCTGCTACCAAACTGCTCCC+AGG | - | tig0024111:26198-26217 | Msa1414340:intergenic | 60.0% | |
| ! | GGGAGCAGTTTGGTAGCAGC+TGG | + | tig0024111:26198-26217 | Msa1414340:CDS | 60.0% |
| GCCTAACTCCTGAGTCGGCA+AGG | - | tig0024111:27184-27203 | Msa1414340:intergenic | 60.0% | |
| ATTGTGCCCCCAGCACAGCG+TGG | + | tig0024111:25847-25866 | Msa1414340:CDS | 65.0% | |
| GACTTGCCACGCTGTGCTGG+GGG | - | tig0024111:25856-25875 | Msa1414340:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024111 | gene | 24478 | 27829 | 24478 | ID=Msa1414340;Name=Msa1414340 |
| tig0024111 | mRNA | 24478 | 27829 | 24478 | ID=Msa1414340-mRNA-1;Parent=Msa1414340;Name=Msa1414340-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.18|0.08|1|1|1|12|0|307 |
| tig0024111 | exon | 24478 | 24531 | 24478 | ID=Msa1414340-mRNA-1:exon:21746;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 24758 | 24805 | 24758 | ID=Msa1414340-mRNA-1:exon:21747;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 25601 | 25675 | 25601 | ID=Msa1414340-mRNA-1:exon:21748;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 25811 | 25872 | 25811 | ID=Msa1414340-mRNA-1:exon:21749;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 25964 | 26030 | 25964 | ID=Msa1414340-mRNA-1:exon:21750;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 26135 | 26248 | 26135 | ID=Msa1414340-mRNA-1:exon:21751;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 26411 | 26497 | 26411 | ID=Msa1414340-mRNA-1:exon:21752;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 26610 | 26680 | 26610 | ID=Msa1414340-mRNA-1:exon:21753;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 26790 | 26855 | 26790 | ID=Msa1414340-mRNA-1:exon:21754;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 26944 | 27030 | 26944 | ID=Msa1414340-mRNA-1:exon:21755;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 27375 | 27450 | 27375 | ID=Msa1414340-mRNA-1:exon:21756;Parent=Msa1414340-mRNA-1 |
| tig0024111 | exon | 27713 | 27829 | 27713 | ID=Msa1414340-mRNA-1:exon:21757;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 24478 | 24531 | 24478 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 24758 | 24805 | 24758 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 25601 | 25675 | 25601 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 25811 | 25872 | 25811 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 25964 | 26030 | 25964 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 26135 | 26248 | 26135 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 26411 | 26497 | 26411 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 26610 | 26680 | 26610 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 26790 | 26855 | 26790 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 26944 | 27030 | 26944 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 27375 | 27450 | 27375 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| tig0024111 | CDS | 27713 | 27829 | 27713 | ID=Msa1414340-mRNA-1:cds;Parent=Msa1414340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
