Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231850 | XP_003593121.1 | 98.538 | 342 | 5 | 0 | 1 | 342 | 1 | 342 | 0.0 | 696 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231850 | sp|Q42649|F16P2_BETVU | 82.353 | 340 | 60 | 0 | 1 | 340 | 1 | 340 | 0.0 | 596 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231850 | G7IL84 | 98.538 | 342 | 5 | 0 | 1 | 342 | 1 | 342 | 0.0 | 696 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0231850 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0231850 | -0.836854 | 7.330527e-57 | -8.615850e-47 |
| Msa0037180 | Msa0231850 | 0.811469 | 6.893378e-51 | -8.615850e-47 |
| Msa0039890 | Msa0231850 | 0.813502 | 2.478136e-51 | -8.615850e-47 |
| Msa0040210 | Msa0231850 | 0.811106 | 8.263862e-51 | -8.615850e-47 |
| Msa0046680 | Msa0231850 | 0.809142 | 2.190393e-50 | -8.615850e-47 |
| Msa0059420 | Msa0231850 | 0.818359 | 2.042113e-52 | -8.615850e-47 |
| Msa0059880 | Msa0231850 | 0.813029 | 3.147714e-51 | -8.615850e-47 |
| Msa0064990 | Msa0231850 | 0.830724 | 2.499069e-55 | -8.615850e-47 |
| Msa0074860 | Msa0231850 | -0.803932 | 2.752362e-49 | -8.615850e-47 |
| Msa0076640 | Msa0231850 | 0.859360 | 4.365360e-63 | -8.615850e-47 |
| Msa0081700 | Msa0231850 | -0.815569 | 8.644549e-52 | -8.615850e-47 |
| Msa0087900 | Msa0231850 | 0.829574 | 4.769546e-55 | -8.615850e-47 |
| Msa0092220 | Msa0231850 | 0.816766 | 4.667952e-52 | -8.615850e-47 |
| Msa0099090 | Msa0231850 | -0.832939 | 7.098057e-56 | -8.615850e-47 |
| Msa0104090 | Msa0231850 | 0.806390 | 8.419755e-50 | -8.615850e-47 |
| Msa0111000 | Msa0231850 | -0.803189 | 3.926304e-49 | -8.615850e-47 |
| Msa0127220 | Msa0231850 | -0.825280 | 5.109589e-54 | -8.615850e-47 |
| Msa0127910 | Msa0231850 | -0.843028 | 1.802313e-58 | -8.615850e-47 |
| Msa0134270 | Msa0231850 | 0.805905 | 1.065383e-49 | -8.615850e-47 |
| Msa0134570 | Msa0231850 | 0.802303 | 5.980584e-49 | -8.615850e-47 |
| Msa0140270 | Msa0231850 | 0.802645 | 5.084207e-49 | -8.615850e-47 |
| Msa0143640 | Msa0231850 | 0.801612 | 8.294349e-49 | -8.615850e-47 |
| Msa0146210 | Msa0231850 | 0.879447 | 1.236728e-69 | -8.615850e-47 |
| Msa0148000 | Msa0231850 | -0.811931 | 5.468802e-51 | -8.615850e-47 |
| Msa0150910 | Msa0231850 | 0.818583 | 1.817589e-52 | -8.615850e-47 |
| Msa0159240 | Msa0231850 | -0.803526 | 3.342845e-49 | -8.615850e-47 |
| Msa0164560 | Msa0231850 | 0.816438 | 5.529073e-52 | -8.615850e-47 |
| Msa0165820 | Msa0231850 | -0.802452 | 5.571766e-49 | -8.615850e-47 |
| Msa0166180 | Msa0231850 | 0.803577 | 3.261670e-49 | -8.615850e-47 |
| Msa0168010 | Msa0231850 | 0.803065 | 4.164938e-49 | -8.615850e-47 |
| Msa0174060 | Msa0231850 | -0.813131 | 2.989691e-51 | -8.615850e-47 |
| Msa0180820 | Msa0231850 | 0.803004 | 4.286244e-49 | -8.615850e-47 |
| Msa0183960 | Msa0231850 | -0.819397 | 1.186721e-52 | -8.615850e-47 |
| Msa0186400 | Msa0231850 | -0.806946 | 6.423990e-50 | -8.615850e-47 |
| Msa0190670 | Msa0231850 | 0.803691 | 3.088679e-49 | -8.615850e-47 |
| Msa0216150 | Msa0231850 | -0.830263 | 3.239849e-55 | -8.615850e-47 |
| Msa0224210 | Msa0231850 | 0.863019 | 3.354940e-64 | -8.615850e-47 |
| Msa0225070 | Msa0231850 | -0.808441 | 3.092936e-50 | -8.615850e-47 |
| Msa0231850 | Msa0232660 | -0.819802 | 9.593955e-53 | -8.615850e-47 |
| Msa0231850 | Msa0236690 | -0.800022 | 1.751727e-48 | -8.615850e-47 |
| Msa0231850 | Msa0238140 | 0.826490 | 2.637073e-54 | -8.615850e-47 |
| Msa0231850 | Msa0242720 | 0.800332 | 1.514613e-48 | -8.615850e-47 |
| Msa0231850 | Msa0246140 | 0.842504 | 2.483946e-58 | -8.615850e-47 |
| Msa0231850 | Msa0269660 | -0.800532 | 1.379216e-48 | -8.615850e-47 |
| Msa0231850 | Msa0269710 | 0.811382 | 7.199917e-51 | -8.615850e-47 |
| Msa0231850 | Msa0271300 | 0.920180 | 1.772571e-87 | -8.615850e-47 |
| Msa0231850 | Msa0275570 | 0.801856 | 7.391336e-49 | -8.615850e-47 |
| Msa0231850 | Msa0284730 | 0.809646 | 1.707402e-50 | -8.615850e-47 |
| Msa0231850 | Msa0294200 | 0.843605 | 1.264236e-58 | -8.615850e-47 |
| Msa0231850 | Msa0297270 | -0.800494 | 1.403595e-48 | -8.615850e-47 |
| Msa0231850 | Msa0303900 | 0.823285 | 1.503948e-53 | -8.615850e-47 |
| Msa0231850 | Msa0304350 | -0.802880 | 4.548376e-49 | -8.615850e-47 |
| Msa0231850 | Msa0305910 | -0.803374 | 3.594567e-49 | -8.615850e-47 |
| Msa0231850 | Msa0309920 | 0.939345 | 1.486660e-99 | -8.615850e-47 |
| Msa0231850 | Msa0310260 | -0.802349 | 5.852281e-49 | -8.615850e-47 |
| Msa0231850 | Msa0324810 | 0.809871 | 1.526879e-50 | -8.615850e-47 |
| Msa0231850 | Msa0332360 | 0.804633 | 1.967236e-49 | -8.615850e-47 |
| Msa0231850 | Msa0340370 | 0.820781 | 5.719865e-53 | -8.615850e-47 |
| Msa0231850 | Msa0364030 | -0.807042 | 6.131563e-50 | -8.615850e-47 |
| Msa0231850 | Msa0368620 | 0.813967 | 1.957631e-51 | -8.615850e-47 |
| Msa0231850 | Msa0369990 | 0.810939 | 8.982524e-51 | -8.615850e-47 |
| Msa0231850 | Msa0374040 | 0.801574 | 8.445744e-49 | -8.615850e-47 |
| Msa0231850 | Msa0378320 | 0.808873 | 2.499983e-50 | -8.615850e-47 |
| Msa0231850 | Msa0389570 | -0.822217 | 2.666164e-53 | -8.615850e-47 |
| Msa0231850 | Msa0389710 | 0.817260 | 3.616388e-52 | -8.615850e-47 |
| Msa0231850 | Msa0390590 | -0.840911 | 6.535024e-58 | -8.615850e-47 |
| Msa0231850 | Msa0390790 | 0.866244 | 3.285396e-65 | -8.615850e-47 |
| Msa0231850 | Msa0398770 | 0.823194 | 1.579008e-53 | -8.615850e-47 |
| Msa0231850 | Msa0403740 | -0.806998 | 6.265902e-50 | -8.615850e-47 |
| Msa0231850 | Msa0412580 | -0.802634 | 5.112405e-49 | -8.615850e-47 |
| Msa0231850 | Msa0427660 | 0.805385 | 1.369325e-49 | -8.615850e-47 |
| Msa0231850 | Msa0430320 | 0.804014 | 2.646478e-49 | -8.615850e-47 |
| Msa0231850 | Msa0430460 | 0.806322 | 8.700514e-50 | -8.615850e-47 |
| Msa0231850 | Msa0436250 | 0.808449 | 3.080664e-50 | -8.615850e-47 |
| Msa0231850 | Msa0449620 | 0.807571 | 4.736729e-50 | -8.615850e-47 |
| Msa0231850 | Msa0456450 | -0.809642 | 1.710310e-50 | -8.615850e-47 |
| Msa0231850 | Msa0457070 | -0.808869 | 2.505921e-50 | -8.615850e-47 |
| Msa0231850 | Msa0466850 | 0.809541 | 1.798561e-50 | -8.615850e-47 |
| Msa0231850 | Msa0480260 | 0.808623 | 2.827557e-50 | -8.615850e-47 |
| Msa0231850 | Msa0480530 | 0.804105 | 2.533820e-49 | -8.615850e-47 |
| Msa0231850 | Msa0480540 | 0.806986 | 6.302667e-50 | -8.615850e-47 |
| Msa0231850 | Msa0480550 | 0.827607 | 1.424840e-54 | -8.615850e-47 |
| Msa0231850 | Msa0483090 | -0.803770 | 2.975405e-49 | -8.615850e-47 |
| Msa0231850 | Msa0508160 | 0.844853 | 5.843815e-59 | -8.615850e-47 |
| Msa0231850 | Msa0513670 | 0.810864 | 9.323840e-51 | -8.615850e-47 |
| Msa0231850 | Msa0518490 | 0.808915 | 2.449072e-50 | -8.615850e-47 |
| Msa0231850 | Msa0526520 | -0.810500 | 1.117454e-50 | -8.615850e-47 |
| Msa0231850 | Msa0537210 | 0.839725 | 1.334101e-57 | -8.615850e-47 |
| Msa0231850 | Msa0538050 | -0.805673 | 1.191842e-49 | -8.615850e-47 |
| Msa0231850 | Msa0548790 | 0.809531 | 1.807338e-50 | -8.615850e-47 |
| Msa0231850 | Msa0558010 | -0.818851 | 1.579410e-52 | -8.615850e-47 |
| Msa0231850 | Msa0560280 | 0.846226 | 2.480518e-59 | -8.615850e-47 |
| Msa0231850 | Msa0563230 | -0.848053 | 7.831751e-60 | -8.615850e-47 |
| Msa0231850 | Msa0565180 | 0.831679 | 1.456042e-55 | -8.615850e-47 |
| Msa0231850 | Msa0571900 | -0.809400 | 1.927572e-50 | -8.615850e-47 |
| Msa0231850 | Msa0572730 | -0.808434 | 3.102545e-50 | -8.615850e-47 |
| Msa0231850 | Msa0580210 | 0.821616 | 3.671986e-53 | -8.615850e-47 |
| Msa0231850 | Msa0580890 | -0.800066 | 1.715882e-48 | -8.615850e-47 |
| Msa0231850 | Msa0582270 | -0.804236 | 2.379455e-49 | -8.615850e-47 |
| Msa0231850 | Msa0584370 | 0.804987 | 1.659374e-49 | -8.615850e-47 |
| Msa0231850 | Msa0585720 | -0.804814 | 1.803209e-49 | -8.615850e-47 |
| Msa0231850 | Msa0593600 | 0.823237 | 1.543362e-53 | -8.615850e-47 |
| Msa0231850 | Msa0609460 | 0.809729 | 1.638535e-50 | -8.615850e-47 |
| Msa0231850 | Msa0612580 | 0.844675 | 6.526195e-59 | -8.615850e-47 |
| Msa0231850 | Msa0614060 | -0.803320 | 3.688221e-49 | -8.615850e-47 |
| Msa0231850 | Msa0614290 | 0.813915 | 2.009941e-51 | -8.615850e-47 |
| Msa0231850 | Msa0616890 | -0.809966 | 1.456858e-50 | -8.615850e-47 |
| Msa0231850 | Msa0617470 | -0.852774 | 3.701126e-61 | -8.615850e-47 |
| Msa0231850 | Msa0619670 | 0.806746 | 7.082187e-50 | -8.615850e-47 |
| Msa0231850 | Msa0621670 | -0.800245 | 1.577654e-48 | -8.615850e-47 |
| Msa0231850 | Msa0633630 | 0.825811 | 3.824096e-54 | -8.615850e-47 |
| Msa0231850 | Msa0635070 | -0.802249 | 6.135564e-49 | -8.615850e-47 |
| Msa0231850 | Msa0636770 | 0.800467 | 1.421477e-48 | -8.615850e-47 |
| Msa0231850 | Msa0638550 | -0.806649 | 7.422543e-50 | -8.615850e-47 |
| Msa0231850 | Msa0638810 | 0.813060 | 3.098073e-51 | -8.615850e-47 |
| Msa0231850 | Msa0638820 | 0.826568 | 2.525599e-54 | -8.615850e-47 |
| Msa0231850 | Msa0651340 | -0.800331 | 1.515423e-48 | -8.615850e-47 |
| Msa0231850 | Msa0651820 | 0.826758 | 2.275634e-54 | -8.615850e-47 |
| Msa0231850 | Msa0652580 | 0.803384 | 3.577647e-49 | -8.615850e-47 |
| Msa0231850 | Msa0652610 | 0.806446 | 8.194738e-50 | -8.615850e-47 |
| Msa0231850 | Msa0654400 | -0.802695 | 4.965264e-49 | -8.615850e-47 |
| Msa0231850 | Msa0657340 | 0.821832 | 3.273018e-53 | -8.615850e-47 |
| Msa0231850 | Msa0672090 | 0.854655 | 1.064946e-61 | -8.615850e-47 |
| Msa0231850 | Msa0672950 | 0.820501 | 6.635015e-53 | -8.615850e-47 |
| Msa0231850 | Msa0672980 | 0.818513 | 1.884779e-52 | -8.615850e-47 |
| Msa0231850 | Msa0695630 | 0.848430 | 6.161313e-60 | -8.615850e-47 |
| Msa0231850 | Msa0697510 | 0.837058 | 6.501446e-57 | -8.615850e-47 |
| Msa0231850 | Msa0697520 | 0.837221 | 5.907503e-57 | -8.615850e-47 |
| Msa0231850 | Msa0698110 | 0.820730 | 5.877088e-53 | -8.615850e-47 |
| Msa0231850 | Msa0700250 | -0.850972 | 1.201249e-60 | -8.615850e-47 |
| Msa0231850 | Msa0701430 | 0.840292 | 9.494677e-58 | -8.615850e-47 |
| Msa0231850 | Msa0701800 | -0.811348 | 7.324151e-51 | -8.615850e-47 |
| Msa0231850 | Msa0702020 | -0.819560 | 1.089421e-52 | -8.615850e-47 |
| Msa0231850 | Msa0705520 | 0.818796 | 1.625983e-52 | -8.615850e-47 |
| Msa0231850 | Msa0741170 | 0.828856 | 7.123641e-55 | -8.615850e-47 |
| Msa0231850 | Msa0744540 | 0.803980 | 2.690407e-49 | -8.615850e-47 |
| Msa0231850 | Msa0744550 | 0.809757 | 1.615987e-50 | -8.615850e-47 |
| Msa0231850 | Msa0744560 | 0.825649 | 4.178912e-54 | -8.615850e-47 |
| Msa0231850 | Msa0750490 | -0.817894 | 2.601997e-52 | -8.615850e-47 |
| Msa0231850 | Msa0789220 | 0.809573 | 1.769618e-50 | -8.615850e-47 |
| Msa0231850 | Msa0794100 | 0.803919 | 2.769800e-49 | -8.615850e-47 |
| Msa0231850 | Msa0795320 | 0.821016 | 5.050751e-53 | -8.615850e-47 |
| Msa0231850 | Msa0826360 | 0.836346 | 9.873166e-57 | -8.615850e-47 |
| Msa0231850 | Msa0826370 | 0.825158 | 5.460747e-54 | -8.615850e-47 |
| Msa0231850 | Msa0826380 | 0.805828 | 1.105835e-49 | -8.615850e-47 |
| Msa0231850 | Msa0826450 | 0.821440 | 4.033742e-53 | -8.615850e-47 |
| Msa0231850 | Msa0829250 | -0.800083 | 1.701723e-48 | -8.615850e-47 |
| Msa0231850 | Msa0829770 | -0.820884 | 5.416677e-53 | -8.615850e-47 |
| Msa0231850 | Msa0861820 | 0.826805 | 2.216903e-54 | -8.615850e-47 |
| Msa0231850 | Msa0865810 | 0.822683 | 2.077827e-53 | -8.615850e-47 |
| Msa0231850 | Msa0865830 | 0.843862 | 1.079409e-58 | -8.615850e-47 |
| Msa0231850 | Msa0867470 | 0.801084 | 1.064011e-48 | -8.615850e-47 |
| Msa0231850 | Msa0868050 | -0.804477 | 2.120364e-49 | -8.615850e-47 |
| Msa0231850 | Msa0869320 | -0.801743 | 7.797291e-49 | -8.615850e-47 |
| Msa0231850 | Msa0876600 | 0.815062 | 1.120605e-51 | -8.615850e-47 |
| Msa0231850 | Msa0906680 | 0.801799 | 7.592056e-49 | -8.615850e-47 |
| Msa0231850 | Msa0914710 | 0.841452 | 4.711977e-58 | -8.615850e-47 |
| Msa0231850 | Msa0921790 | 0.817641 | 2.967951e-52 | -8.615850e-47 |
| Msa0231850 | Msa0931550 | -0.802804 | 4.716032e-49 | -8.615850e-47 |
| Msa0231850 | Msa0934290 | -0.817962 | 2.511388e-52 | -8.615850e-47 |
| Msa0231850 | Msa0940780 | 0.802424 | 5.646152e-49 | -8.615850e-47 |
| Msa0231850 | Msa0944470 | 0.821959 | 3.058641e-53 | -8.615850e-47 |
| Msa0231850 | Msa0945320 | 0.804344 | 2.259875e-49 | -8.615850e-47 |
| Msa0231850 | Msa0947520 | 0.824792 | 6.662832e-54 | -8.615850e-47 |
| Msa0231850 | Msa0947550 | -0.806606 | 7.581714e-50 | -8.615850e-47 |
| Msa0231850 | Msa0956600 | -0.822413 | 2.401316e-53 | -8.615850e-47 |
| Msa0231850 | Msa0960580 | 0.802609 | 5.173727e-49 | -8.615850e-47 |
| Msa0231850 | Msa0971780 | -0.818066 | 2.379632e-52 | -8.615850e-47 |
| Msa0231850 | Msa0975950 | 0.801609 | 8.307428e-49 | -8.615850e-47 |
| Msa0231850 | Msa1016450 | -0.820133 | 8.057404e-53 | -8.615850e-47 |
| Msa0231850 | Msa1018210 | -0.850148 | 2.048261e-60 | -8.615850e-47 |
| Msa0231850 | Msa1035050 | 0.802605 | 5.181801e-49 | -8.615850e-47 |
| Msa0231850 | Msa1037360 | 0.807669 | 4.515398e-50 | -8.615850e-47 |
| Msa0231850 | Msa1038610 | -0.801660 | 8.106301e-49 | -8.615850e-47 |
| Msa0231850 | Msa1039150 | -0.805237 | 1.470844e-49 | -8.615850e-47 |
| Msa0231850 | Msa1039650 | 0.802799 | 4.726804e-49 | -8.615850e-47 |
| Msa0231850 | Msa1057940 | -0.815923 | 7.208067e-52 | -8.615850e-47 |
| Msa0231850 | Msa1069270 | 0.802131 | 6.488578e-49 | -8.615850e-47 |
| Msa0231850 | Msa1082080 | 0.812829 | 3.482462e-51 | -8.615850e-47 |
| Msa0231850 | Msa1088000 | -0.805789 | 1.126886e-49 | -8.615850e-47 |
| Msa0231850 | Msa1090020 | -0.801477 | 8.841462e-49 | -8.615850e-47 |
| Msa0231850 | Msa1093190 | -0.800041 | 1.735449e-48 | -8.615850e-47 |
| Msa0231850 | Msa1104020 | -0.826671 | 2.387148e-54 | -8.615850e-47 |
| Msa0231850 | Msa1112210 | -0.813777 | 2.155146e-51 | -8.615850e-47 |
| Msa0231850 | Msa1120560 | 0.822921 | 1.828845e-53 | -8.615850e-47 |
| Msa0231850 | Msa1121720 | -0.811057 | 8.467414e-51 | -8.615850e-47 |
| Msa0231850 | Msa1123000 | 0.819185 | 1.326103e-52 | -8.615850e-47 |
| Msa0231850 | Msa1138110 | 0.802949 | 4.400462e-49 | -8.615850e-47 |
| Msa0231850 | Msa1142390 | 0.809584 | 1.760190e-50 | -8.615850e-47 |
| Msa0231850 | Msa1157200 | 0.816776 | 4.645718e-52 | -8.615850e-47 |
| Msa0231850 | Msa1162430 | 0.814166 | 1.769446e-51 | -8.615850e-47 |
| Msa0231850 | Msa1164230 | 0.811193 | 7.912921e-51 | -8.615850e-47 |
| Msa0231850 | Msa1174280 | 0.829036 | 6.443084e-55 | -8.615850e-47 |
| Msa0231850 | Msa1177360 | -0.822223 | 2.656752e-53 | -8.615850e-47 |
| Msa0231850 | Msa1199540 | -0.802017 | 6.849507e-49 | -8.615850e-47 |
| Msa0231850 | Msa1202110 | 0.801385 | 9.230675e-49 | -8.615850e-47 |
| Msa0231850 | Msa1205270 | -0.818546 | 1.852922e-52 | -8.615850e-47 |
| Msa0231850 | Msa1211610 | 0.802359 | 5.823340e-49 | -8.615850e-47 |
| Msa0231850 | Msa1214960 | 0.802234 | 6.179393e-49 | -8.615850e-47 |
| Msa0231850 | Msa1223560 | 0.804883 | 1.743926e-49 | -8.615850e-47 |
| Msa0231850 | Msa1236740 | -0.804819 | 1.798717e-49 | -8.615850e-47 |
| Msa0231850 | Msa1254870 | 0.801025 | 1.093823e-48 | -8.615850e-47 |
| Msa0231850 | Msa1275220 | 0.807735 | 4.371162e-50 | -8.615850e-47 |
| Msa0231850 | Msa1299480 | 0.808610 | 2.846659e-50 | -8.615850e-47 |
| Msa0231850 | Msa1309040 | 0.806995 | 6.274601e-50 | -8.615850e-47 |
| Msa0231850 | Msa1313720 | 0.815813 | 7.625173e-52 | -8.615850e-47 |
| Msa0231850 | Msa1317740 | 0.807661 | 4.533457e-50 | -8.615850e-47 |
| Msa0231850 | Msa1322180 | 0.813431 | 2.568909e-51 | -8.615850e-47 |
| Msa0231850 | Msa1328430 | 0.801500 | 8.743088e-49 | -8.615850e-47 |
| Msa0231850 | Msa1342360 | -0.810412 | 1.167806e-50 | -8.615850e-47 |
| Msa0231850 | Msa1343450 | -0.800054 | 1.725016e-48 | -8.615850e-47 |
| Msa0231850 | Msa1344870 | -0.825926 | 3.591345e-54 | -8.615850e-47 |
| Msa0231850 | Msa1344930 | 0.861430 | 1.031705e-63 | -8.615850e-47 |
| Msa0231850 | Msa1345390 | 0.804758 | 1.852213e-49 | -8.615850e-47 |
| Msa0231850 | Msa1356100 | -0.810130 | 1.342937e-50 | -8.615850e-47 |
| Msa0231850 | Msa1363310 | -0.810913 | 9.097735e-51 | -8.615850e-47 |
| Msa0231850 | Msa1371540 | -0.806717 | 7.182948e-50 | -8.615850e-47 |
| Msa0231850 | Msa1372470 | -0.801867 | 7.354208e-49 | -8.615850e-47 |
| Msa0231850 | Msa1373310 | -0.801760 | 7.733800e-49 | -8.615850e-47 |
| Msa0231850 | Msa1373990 | 0.879751 | 9.651187e-70 | -8.615850e-47 |
| Msa0231850 | Msa1375640 | 0.825979 | 3.488967e-54 | -8.615850e-47 |
| Msa0231850 | Msa1375980 | -0.803204 | 3.897832e-49 | -8.615850e-47 |
| Msa0231850 | Msa1376520 | 0.806555 | 7.770128e-50 | -8.615850e-47 |
| Msa0231850 | Msa1377980 | -0.813184 | 2.910635e-51 | -8.615850e-47 |
| Msa0231850 | Msa1382740 | 0.800436 | 1.442461e-48 | -8.615850e-47 |
| Msa0231850 | Msa1384410 | -0.821791 | 3.345679e-53 | -8.615850e-47 |
| Msa0231850 | Msa1384970 | -0.812518 | 4.071511e-51 | -8.615850e-47 |
| Msa0231850 | Msa1386580 | -0.811948 | 5.423954e-51 | -8.615850e-47 |
| Msa0231850 | Msa1392570 | -0.804151 | 2.478977e-49 | -8.615850e-47 |
| Msa0231850 | Msa1398120 | 0.836249 | 1.045041e-56 | -8.615850e-47 |
| Msa0231850 | Msa1402300 | 0.826282 | 2.954800e-54 | -8.615850e-47 |
| Msa0231850 | Msa1408280 | -0.811072 | 8.403629e-51 | -8.615850e-47 |
| Msa0231850 | Msa1410500 | -0.807658 | 4.539838e-50 | -8.615850e-47 |
| Msa0231850 | Msa1414340 | 0.986863 | 3.135330e-168 | -8.615850e-47 |
| Msa0231850 | Msa1429190 | 0.810702 | 1.010566e-50 | -8.615850e-47 |
| Msa0231850 | Msa1432730 | -0.801126 | 1.043150e-48 | -8.615850e-47 |
| Msa0231850 | Msa1433060 | -0.802673 | 5.016770e-49 | -8.615850e-47 |
| Msa0231850 | Msa1449470 | 0.803368 | 3.604362e-49 | -8.615850e-47 |
| Msa0231850 | Msa1459130 | -0.816037 | 6.799461e-52 | -8.615850e-47 |
| Msa0231850 | Msa1459920 | 0.814556 | 1.450750e-51 | -8.615850e-47 |
| Msa0231850 | Msa1459930 | 0.826660 | 2.402103e-54 | -8.615850e-47 |
| Msa0231850 | Msa1464470 | -0.806796 | 6.912192e-50 | -8.615850e-47 |
| Msa0231850 | Msa1466530 | 0.831317 | 1.787967e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231850 | MtrunA17_Chr2g0278581 | 98.538 | 342 | 5 | 0 | 1 | 342 | 1 | 342 | 0.0 | 696 |
| Msa0231850 | MtrunA17_Chr6g0463901 | 84.776 | 335 | 51 | 0 | 1 | 335 | 1 | 335 | 0.0 | 601 |
| Msa0231850 | MtrunA17_Chr7g0241071 | 50.585 | 342 | 151 | 2 | 11 | 335 | 71 | 411 | 1.19e-116 | 343 |
| Msa0231850 | MtrunA17_Chr4g0049821 | 42.258 | 310 | 156 | 6 | 32 | 331 | 87 | 383 | 6.13e-76 | 239 |
| Msa0231850 | MtrunA17_Chr3g0113101 | 30.961 | 281 | 173 | 8 | 67 | 342 | 116 | 380 | 4.07e-23 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231850 | AT1G43670.1 | 80.826 | 339 | 65 | 0 | 1 | 339 | 1 | 339 | 0.0 | 584 |
| Msa0231850 | AT3G54050.2 | 50.588 | 340 | 152 | 3 | 11 | 335 | 79 | 417 | 1.87e-116 | 343 |
| Msa0231850 | AT3G54050.1 | 50.588 | 340 | 152 | 3 | 11 | 335 | 79 | 417 | 1.87e-116 | 343 |
| Msa0231850 | AT5G64380.1 | 40.881 | 318 | 168 | 8 | 32 | 339 | 89 | 396 | 7.16e-74 | 234 |
| Msa0231850 | AT3G55800.1 | 31.449 | 283 | 161 | 10 | 67 | 338 | 123 | 383 | 4.59e-23 | 99.4 |
Find 69 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATCAATCACATTGTTCT+TGG | 0.178736 | 2_2:-4180759 | Msa0231850:CDS |
| GAATAAATCTTTCCTTTCTT+TGG | 0.198088 | 2_2:+4178740 | None:intergenic |
| CACTATTGCATATAGATCTT+TGG | 0.249832 | 2_2:-4179233 | Msa0231850:intron |
| ACTGACTTGCCACGCTGTGC+TGG | 0.263816 | 2_2:+4179497 | None:intergenic |
| CTTACCTTAGCTTTCCATTT+GGG | 0.275310 | 2_2:+4178340 | None:intergenic |
| CATAGTTGTGTTTGATCCTT+TGG | 0.288689 | 2_2:-4179386 | Msa0231850:CDS |
| CCAAAGTCTCTTAGGTATAT+TGG | 0.298619 | 2_2:-4178523 | Msa0231850:CDS |
| TATGCAGAATCCAAAGAAAA+TGG | 0.326692 | 2_2:-4177553 | Msa0231850:CDS |
| TGTGCGTCCGCTGCTGATTA+AGG | 0.328499 | 2_2:+4179700 | None:intergenic |
| ATTGATTGTGGAGTTTCAAT+AGG | 0.341565 | 2_2:-4179349 | Msa0231850:CDS |
| CACCATATAGCAATGTTCTA+TGG | 0.354552 | 2_2:+4178394 | None:intergenic |
| TCTTACCTTAGCTTTCCATT+TGG | 0.373307 | 2_2:+4178339 | None:intergenic |
| GTTCACCACCAAAGTCTCTT+AGG | 0.374034 | 2_2:-4178531 | Msa0231850:CDS |
| CTGACTTGCCACGCTGTGCT+GGG | 0.376754 | 2_2:+4179498 | None:intergenic |
| TCGTAGCTTCCAAGGAATAT+TGG | 0.381749 | 2_2:+4177601 | None:intergenic |
| AATGCATGTACCTTGATGTT+TGG | 0.391145 | 2_2:+4178867 | None:intergenic |
| TTTGTGCTTAGCACAGGAAA+TGG | 0.404030 | 2_2:-4178942 | Msa0231850:CDS |
| ATGCATGTACCTTGATGTTT+GGG | 0.428381 | 2_2:+4178868 | None:intergenic |
| TTTACACTTGATCCTTCCCT+TGG | 0.433839 | 2_2:-4178909 | Msa0231850:CDS |
| AAAGATTTATTCTGTGAATG+AGG | 0.439092 | 2_2:-4178729 | Msa0231850:CDS |
| GTCCATAGAACATTGCTATA+TGG | 0.440321 | 2_2:-4178396 | Msa0231850:CDS |
| CCAATATACCTAAGAGACTT+TGG | 0.448075 | 2_2:+4178523 | None:intergenic |
| GCAGCTGGTTACTGCATGTA+TGG | 0.456073 | 2_2:-4179140 | Msa0231850:CDS |
| CTGATTTGATGACAATAACT+AGG | 0.457076 | 2_2:-4180836 | Msa0231850:CDS |
| AGCACAGGAAATGGAGTGAA+TGG | 0.467256 | 2_2:-4178933 | Msa0231850:CDS |
| AACAAAACTCACTTGAACAT+TGG | 0.470224 | 2_2:+4180559 | None:intergenic |
| ATTGCAACCTGGGAGCAGTT+TGG | 0.473530 | 2_2:-4179165 | Msa0231850:CDS |
| AACTCCACAATCAATGTTTG+AGG | 0.474075 | 2_2:+4179357 | None:intergenic |
| TGACTTGCCACGCTGTGCTG+GGG | 0.480596 | 2_2:+4179499 | None:intergenic |
| GATCGATCGCCAATATTCCT+TGG | 0.483711 | 2_2:-4177610 | Msa0231850:CDS |
| GCTGATAAGAAAAGCCCAAA+TGG | 0.486498 | 2_2:-4178354 | Msa0231850:CDS |
| GGGAGCAGTTTGGTAGCAGC+TGG | 0.487734 | 2_2:-4179155 | Msa0231850:CDS |
| TGGTGTCTCCAGCAAGTCCT+AGG | 0.492171 | 2_2:+4180579 | None:intergenic |
| TCCAAAACTTACTTGGCCGT+TGG | 0.497852 | 2_2:+4178683 | None:intergenic |
| AAGATTTATTCTGTGAATGA+GGG | 0.501287 | 2_2:-4178728 | Msa0231850:CDS |
| TTGCAGTTTGTGCTTAGCAC+AGG | 0.508953 | 2_2:-4178948 | Msa0231850:intron |
| GTTGAAGATGCATTGCAACC+TGG | 0.510015 | 2_2:-4179176 | Msa0231850:CDS |
| GTGCCTTCTTGTTTCAGAAG+AGG | 0.512489 | 2_2:-4179543 | Msa0231850:CDS |
| CAGTTCTGTTAGCATCTGCT+TGG | 0.515272 | 2_2:+4180856 | None:intergenic |
| TTGAAGATGCATTGCAACCT+GGG | 0.517948 | 2_2:-4179175 | Msa0231850:CDS |
| TTCTAATGAAGTATTTGTGA+AGG | 0.533564 | 2_2:-4179723 | Msa0231850:CDS |
| GTTGTGTTTGATCCTTTGGA+TGG | 0.544716 | 2_2:-4179382 | Msa0231850:CDS |
| CAATTTCATCGTAGCTTCCA+AGG | 0.546062 | 2_2:+4177593 | None:intergenic |
| GACTTGCCACGCTGTGCTGG+GGG | 0.552070 | 2_2:+4179500 | None:intergenic |
| TGCTCCATCAAATATGACAT+TGG | 0.555129 | 2_2:+4177959 | None:intergenic |
| GGTTCCTCAAACATTGATTG+TGG | 0.568496 | 2_2:-4179361 | Msa0231850:CDS |
| AACAATGTGATTGATGAGAA+TGG | 0.568531 | 2_2:+4180764 | None:intergenic |
| TCATATTTGATGGAGCAAGC+AGG | 0.570588 | 2_2:-4177953 | Msa0231850:CDS |
| GAGTCAATATGAACTCTCCA+AGG | 0.570901 | 2_2:+4178892 | None:intergenic |
| TGTTTGTTCTTCTGTTAACA+AGG | 0.573073 | 2_2:-4180727 | Msa0231850:intron |
| ACTTCATAGATACCAAAGAA+AGG | 0.574423 | 2_2:-4178752 | Msa0231850:intron |
| AGCTTTCACAGGAAAACAAA+GGG | 0.576524 | 2_2:-4177924 | Msa0231850:intron |
| GCAGGAGGTCAAGCTTTCAC+AGG | 0.578987 | 2_2:-4177935 | Msa0231850:CDS |
| AGTCTCTTAGGTATATTGGC+AGG | 0.582669 | 2_2:-4178519 | Msa0231850:intron |
| CAACCTCTTCTGAAACAAGA+AGG | 0.591219 | 2_2:+4179540 | None:intergenic |
| CATGTATGGAAGCTCTTGCA+CGG | 0.591600 | 2_2:-4179126 | Msa0231850:intron |
| AAAGCCCAAATGGAAAGCTA+AGG | 0.593648 | 2_2:-4178344 | Msa0231850:intron |
| TTTGGTGGTGAACTGTCTTG+TGG | 0.594367 | 2_2:+4178541 | None:intergenic |
| GCTGCTACCAAACTGCTCCC+AGG | 0.598305 | 2_2:+4179158 | None:intergenic |
| ATTGACTCACCCAAACATCA+AGG | 0.604776 | 2_2:-4178877 | Msa0231850:intron |
| CATAGAACATTGCTATATGG+TGG | 0.610102 | 2_2:-4178393 | Msa0231850:CDS |
| AATATGAACTCTCCAAGGGA+AGG | 0.611205 | 2_2:+4178897 | None:intergenic |
| AAGCTTTCACAGGAAAACAA+AGG | 0.624169 | 2_2:-4177925 | Msa0231850:CDS |
| GTGAAGGCCTTAATCAGCAG+CGG | 0.626415 | 2_2:-4179707 | Msa0231850:CDS |
| ATATACCTAAGAGACTTTGG+TGG | 0.639800 | 2_2:+4178526 | None:intergenic |
| AGTCAATATGAACTCTCCAA+GGG | 0.668311 | 2_2:+4178893 | None:intergenic |
| ATGTTTGAGGAACCATCCAA+AGG | 0.670132 | 2_2:+4179370 | None:intergenic |
| TCAAAGTATGCTGAATCACG+TGG | 0.673339 | 2_2:-4180795 | Msa0231850:CDS |
| TATTTGATGGAGCAAGCAGG+AGG | 0.695622 | 2_2:-4177950 | Msa0231850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTAATATGAGTTTAA+TGG | - | chr2_2:4178010-4178029 | Msa0231850:intron | 10.0% |
| !!! | AGAAAAAAAAAATTTTGAAA+TGG | - | chr2_2:4178441-4178460 | Msa0231850:intron | 10.0% |
| !!! | TTGATAAATATAGAATATTT+TGG | + | chr2_2:4178940-4178959 | None:intergenic | 10.0% |
| !! | TAAATTAACATATAGTTATT+AGG | - | chr2_2:4179588-4179607 | Msa0231850:intron | 10.0% |
| !!! | ACAATATTAAATGGATTTAA+AGG | + | chr2_2:4178178-4178197 | None:intergenic | 15.0% |
| !! | GTTGAAAATACAATATTAAA+TGG | + | chr2_2:4178187-4178206 | None:intergenic | 15.0% |
| !!! | TAATTCATATGCATTTTATT+TGG | - | chr2_2:4178797-4178816 | Msa0231850:intron | 15.0% |
| !! | ATGTTTAAACTAATAACTTA+TGG | - | chr2_2:4180382-4180401 | Msa0231850:intron | 15.0% |
| !! | CACGTAACATTATAAATTAA+AGG | + | chr2_2:4177891-4177910 | None:intergenic | 20.0% |
| !! | AGTATTATTTCAGATTTAGA+TGG | + | chr2_2:4177972-4177991 | None:intergenic | 20.0% |
| !! | TAGAAATTACTACTATGATA+TGG | + | chr2_2:4178088-4178107 | None:intergenic | 20.0% |
| !!! | CACTCTAATTCATTTTTATA+AGG | + | chr2_2:4178116-4178135 | None:intergenic | 20.0% |
| !! | CTTATAAAAATGAATTAGAG+TGG | - | chr2_2:4178114-4178133 | Msa0231850:intron | 20.0% |
| !!! | AAATCGAATTTAAAGCTAAT+TGG | + | chr2_2:4178267-4178286 | None:intergenic | 20.0% |
| !!! | AGGAATTCAAGTATTTTAAA+GGG | + | chr2_2:4178345-4178364 | None:intergenic | 20.0% |
| !!! | AAGGAATTCAAGTATTTTAA+AGG | + | chr2_2:4178346-4178365 | None:intergenic | 20.0% |
| !!! | CTTTATTTTGTTCTTTTTGT+TGG | - | chr2_2:4178756-4178775 | Msa0231850:intron | 20.0% |
| !!! | AAATTGCATTTTACTAAATC+AGG | + | chr2_2:4178835-4178854 | None:intergenic | 20.0% |
| !!! | TAAAATGCAATTTTTTGCTT+TGG | - | chr2_2:4178842-4178861 | Msa0231850:intron | 20.0% |
| !! | TAACATTCTATTAGCATAAT+CGG | + | chr2_2:4179321-4179340 | None:intergenic | 20.0% |
| !!! | TAGTTATTAGGTTTTTACTT+AGG | - | chr2_2:4179600-4179619 | Msa0231850:intron | 20.0% |
| !! | AATAAAATGAAGAAACTTGA+AGG | + | chr2_2:4179956-4179975 | None:intergenic | 20.0% |
| !! | AAATTTGACTGTAAATTATC+AGG | - | chr2_2:4180410-4180429 | Msa0231850:intron | 20.0% |
| !! | AATTTGACTGTAAATTATCA+GGG | - | chr2_2:4180411-4180430 | Msa0231850:intron | 20.0% |
| !! | ACGATTAAATAACTGATATA+AGG | + | chr2_2:4180688-4180707 | None:intergenic | 20.0% |
| ! | AAACTGAAACATTCAATCAA+TGG | + | chr2_2:4177781-4177800 | None:intergenic | 25.0% |
| !!! | TTTCAGTTTTTTTTACTGAC+AGG | - | chr2_2:4177792-4177811 | Msa0231850:intron | 25.0% |
| ! | TCACACAAAAAAGATTTAGA+TGG | + | chr2_2:4177941-4177960 | None:intergenic | 25.0% |
| ! | AACTTGATGTAATAGAGATA+AGG | - | chr2_2:4178306-4178325 | Msa0231850:intron | 25.0% |
| ! | TGAGTGTGTAATTAAATTCA+AGG | + | chr2_2:4178365-4178384 | None:intergenic | 25.0% |
| ! | CCAAGTATTATAAGTTTCTA+TGG | + | chr2_2:4178538-4178557 | None:intergenic | 25.0% |
| ! | CCATAGAAACTTATAATACT+TGG | - | chr2_2:4178535-4178554 | Msa0231850:CDS | 25.0% |
| ! | TAGTGGTGAATAGAAAAATA+GGG | + | chr2_2:4178632-4178651 | None:intergenic | 25.0% |
| ! | ATAGTGGTGAATAGAAAAAT+AGG | + | chr2_2:4178633-4178652 | None:intergenic | 25.0% |
| ! | TTTCTATTCACCACTATTTA+AGG | - | chr2_2:4178636-4178655 | Msa0231850:intron | 25.0% |
| ! | TTCTATTCACCACTATTTAA+GGG | - | chr2_2:4178637-4178656 | Msa0231850:intron | 25.0% |
| !! | TTCTAATGAAGTATTTGTGA+AGG | - | chr2_2:4178687-4178706 | Msa0231850:intron | 25.0% |
| ! | AAAATATAGCAATCAAGCTT+GGG | + | chr2_2:4179117-4179136 | None:intergenic | 25.0% |
| ! | TAAAATATAGCAATCAAGCT+TGG | + | chr2_2:4179118-4179137 | None:intergenic | 25.0% |
| ! | GAATAAATCTTTCCTTTCTT+TGG | + | chr2_2:4179673-4179692 | None:intergenic | 25.0% |
| ! | AAAGATTTATTCTGTGAATG+AGG | - | chr2_2:4179681-4179700 | Msa0231850:intron | 25.0% |
| ! | AAGATTTATTCTGTGAATGA+GGG | - | chr2_2:4179682-4179701 | Msa0231850:intron | 25.0% |
| ! | AACTTTATGTAGTTTGATCT+TGG | - | chr2_2:4179926-4179945 | Msa0231850:intron | 25.0% |
| !! | AATTCAGATTCCTTTTCTAT+CGG | + | chr2_2:4180181-4180200 | None:intergenic | 25.0% |
| !!! | ACCTAAGGACATTTTAAAAT+CGG | - | chr2_2:4180209-4180228 | Msa0231850:intron | 25.0% |
| ! | ACTACATATCCCAATAATTT+AGG | + | chr2_2:4180282-4180301 | None:intergenic | 25.0% |
| ! | ACATATCATATAACACAACT+CGG | + | chr2_2:4180366-4180385 | None:intergenic | 25.0% |
| !! | TTTTCCAATGTCATATTTGA+TGG | - | chr2_2:4180447-4180466 | Msa0231850:intron | 25.0% |
| ! | CAGTTATTTAATCGTTGAAT+TGG | - | chr2_2:4180693-4180712 | Msa0231850:intron | 25.0% |
| !!! | TCATACGATAATTTTTTTGC+AGG | - | chr2_2:4180748-4180767 | Msa0231850:CDS | 25.0% |
| ! | CTGATTTGATGACAATAACT+AGG | - | chr2_2:4177574-4177593 | Msa0231850:CDS | 30.0% |
| AACAATGTGATTGATGAGAA+TGG | + | chr2_2:4177649-4177668 | None:intergenic | 30.0% | |
| TGTTTGTTCTTCTGTTAACA+AGG | - | chr2_2:4177683-4177702 | Msa0231850:intron | 30.0% | |
| AACAAAACTCACTTGAACAT+TGG | + | chr2_2:4177854-4177873 | None:intergenic | 30.0% | |
| GTTGGATGTTGATGTAAAAA+TGG | + | chr2_2:4178048-4178067 | None:intergenic | 30.0% | |
| AAATACTTCCAAAACATGTG+CGG | - | chr2_2:4178236-4178255 | Msa0231850:intron | 30.0% | |
| TACATCAAGTTTGCATAAAC+CGG | + | chr2_2:4178297-4178316 | None:intergenic | 30.0% | |
| ! | TTTTTCTTTCTCTAATGCAC+AGG | + | chr2_2:4178428-4178447 | None:intergenic | 30.0% |
| ! | AAATGGTTTTCGCATAACTT+TGG | - | chr2_2:4178458-4178477 | Msa0231850:intron | 30.0% |
| TGGAAATAGAGACACTTAAA+GGG | + | chr2_2:4178518-4178537 | None:intergenic | 30.0% | |
| ATGGAAATAGAGACACTTAA+AGG | + | chr2_2:4178519-4178538 | None:intergenic | 30.0% | |
| ACATTTCACAAAGTTTCAAG+AGG | - | chr2_2:4178584-4178603 | Msa0231850:intron | 30.0% | |
| TCTATTCACCACTATTTAAG+GGG | - | chr2_2:4178638-4178657 | Msa0231850:intron | 30.0% | |
| ATTGATTGTGGAGTTTCAAT+AGG | - | chr2_2:4179061-4179080 | Msa0231850:intron | 30.0% | |
| CACTATTGCATATAGATCTT+TGG | - | chr2_2:4179177-4179196 | Msa0231850:CDS | 30.0% | |
| CAATTTATTCGATCAGAATC+AGG | + | chr2_2:4179435-4179454 | None:intergenic | 30.0% | |
| TTCTGATCGAATAAATTGCA+CGG | - | chr2_2:4179437-4179456 | Msa0231850:intron | 30.0% | |
| ACTTCATAGATACCAAAGAA+AGG | - | chr2_2:4179658-4179677 | Msa0231850:intron | 30.0% | |
| CAGAATTTCCAAAACTTACT+TGG | + | chr2_2:4179737-4179756 | None:intergenic | 30.0% | |
| TTCATGTTAACTCAAGAATC+AGG | + | chr2_2:4179780-4179799 | None:intergenic | 30.0% | |
| GAAAAATGCACAATACAGTA+TGG | - | chr2_2:4179983-4180002 | Msa0231850:intron | 30.0% | |
| AAATGATTCTCCGATAGAAA+AGG | - | chr2_2:4180168-4180187 | Msa0231850:intron | 30.0% | |
| TTAAAATGTCCTTAGGTCTT+AGG | + | chr2_2:4180206-4180225 | None:intergenic | 30.0% | |
| !!! | TCCGATTTTAAAATGTCCTT+AGG | + | chr2_2:4180213-4180232 | None:intergenic | 30.0% |
| GTTCGAGAACCTAAATTATT+GGG | - | chr2_2:4180270-4180289 | Msa0231850:intron | 30.0% | |
| !! | TATGTATGGAGTATTGCAAA+CGG | + | chr2_2:4180306-4180325 | None:intergenic | 30.0% |
| TCATTTGATACTACATCTGA+TGG | - | chr2_2:4180716-4180735 | Msa0231850:intron | 30.0% | |
| ! | GATCGATCATGTATTTTCTT+AGG | + | chr2_2:4180788-4180807 | None:intergenic | 30.0% |
| TATGCAGAATCCAAAGAAAA+TGG | - | chr2_2:4180857-4180876 | Msa0231850:CDS | 30.0% | |
| CTCATCAATCACATTGTTCT+TGG | - | chr2_2:4177651-4177670 | Msa0231850:intron | 35.0% | |
| !!! | AGTTTTTTTTACTGACAGGC+TGG | - | chr2_2:4177796-4177815 | Msa0231850:intron | 35.0% |
| ACTATGATATGGAAGTAGTG+TGG | + | chr2_2:4178077-4178096 | None:intergenic | 35.0% | |
| CTATTCACCACTATTTAAGG+GGG | - | chr2_2:4178639-4178658 | Msa0231850:intron | 35.0% | |
| CATAGTTGTGTTTGATCCTT+TGG | - | chr2_2:4179024-4179043 | Msa0231850:intron | 35.0% | |
| AACTCCACAATCAATGTTTG+AGG | + | chr2_2:4179056-4179075 | None:intergenic | 35.0% | |
| AGTCAATATGAACTCTCCAA+GGG | + | chr2_2:4179520-4179539 | None:intergenic | 35.0% | |
| ATGCATGTACCTTGATGTTT+GGG | + | chr2_2:4179545-4179564 | None:intergenic | 35.0% | |
| AATGCATGTACCTTGATGTT+TGG | + | chr2_2:4179546-4179565 | None:intergenic | 35.0% | |
| GCATTATGTTGCAGCTAAAT+TGG | - | chr2_2:4179561-4179580 | Msa0231850:intron | 35.0% | |
| ATATACCTAAGAGACTTTGG+TGG | + | chr2_2:4179887-4179906 | None:intergenic | 35.0% | |
| CCAATATACCTAAGAGACTT+TGG | + | chr2_2:4179890-4179909 | None:intergenic | 35.0% | |
| CCAAAGTCTCTTAGGTATAT+TGG | - | chr2_2:4179887-4179906 | Msa0231850:intron | 35.0% | |
| GTCCATAGAACATTGCTATA+TGG | - | chr2_2:4180014-4180033 | Msa0231850:intron | 35.0% | |
| CACCATATAGCAATGTTCTA+TGG | + | chr2_2:4180019-4180038 | None:intergenic | 35.0% | |
| CATAGAACATTGCTATATGG+TGG | - | chr2_2:4180017-4180036 | Msa0231850:intron | 35.0% | |
| ! | CTTACCTTAGCTTTCCATTT+GGG | + | chr2_2:4180073-4180092 | None:intergenic | 35.0% |
| ! | TCTTACCTTAGCTTTCCATT+TGG | + | chr2_2:4180074-4180093 | None:intergenic | 35.0% |
| GGTAAGACTGTGATATACTT+TGG | - | chr2_2:4180087-4180106 | Msa0231850:intron | 35.0% | |
| ACATTTGATCTAGCATCCTT+AGG | - | chr2_2:4180128-4180147 | Msa0231850:intron | 35.0% | |
| GGTTCGAGAACCTAAATTAT+TGG | - | chr2_2:4180269-4180288 | Msa0231850:intron | 35.0% | |
| !! | ATGTATGGAGTATTGCAAAC+GGG | + | chr2_2:4180305-4180324 | None:intergenic | 35.0% |
| TCCATACATAGATGAGAACT+TGG | - | chr2_2:4180316-4180335 | Msa0231850:intron | 35.0% | |
| TGCTCCATCAAATATGACAT+TGG | + | chr2_2:4180454-4180473 | None:intergenic | 35.0% | |
| AAGCTTTCACAGGAAAACAA+AGG | - | chr2_2:4180485-4180504 | Msa0231850:intron | 35.0% | |
| AGCTTTCACAGGAAAACAAA+GGG | - | chr2_2:4180486-4180505 | Msa0231850:intron | 35.0% | |
| TCAAAGTATGCTGAATCACG+TGG | - | chr2_2:4177615-4177634 | Msa0231850:CDS | 40.0% | |
| ! | TTTTTACTGACAGGCTGGAT+TGG | - | chr2_2:4177801-4177820 | Msa0231850:intron | 40.0% |
| ! | TAAATTCGATTTGCCTCCAC+CGG | - | chr2_2:4178275-4178294 | Msa0231850:intron | 40.0% |
| ATCAAGTTTGCATAAACCGG+TGG | + | chr2_2:4178294-4178313 | None:intergenic | 40.0% | |
| !! | CAACCTCTTCTGAAACAAGA+AGG | + | chr2_2:4178873-4178892 | None:intergenic | 40.0% |
| GTTGTGTTTGATCCTTTGGA+TGG | - | chr2_2:4179028-4179047 | Msa0231850:intron | 40.0% | |
| ATGTTTGAGGAACCATCCAA+AGG | + | chr2_2:4179043-4179062 | None:intergenic | 40.0% | |
| ! | GGTTCCTCAAACATTGATTG+TGG | - | chr2_2:4179049-4179068 | Msa0231850:intron | 40.0% |
| TTGAAGATGCATTGCAACCT+GGG | - | chr2_2:4179235-4179254 | Msa0231850:intron | 40.0% | |
| TTTGTGCTTAGCACAGGAAA+TGG | - | chr2_2:4179468-4179487 | Msa0231850:intron | 40.0% | |
| TTTACACTTGATCCTTCCCT+TGG | - | chr2_2:4179501-4179520 | Msa0231850:intron | 40.0% | |
| AATATGAACTCTCCAAGGGA+AGG | + | chr2_2:4179516-4179535 | None:intergenic | 40.0% | |
| GAGTCAATATGAACTCTCCA+AGG | + | chr2_2:4179521-4179540 | None:intergenic | 40.0% | |
| ! | ATTGACTCACCCAAACATCA+AGG | - | chr2_2:4179533-4179552 | Msa0231850:CDS | 40.0% |
| CAAAAACTGGGATGAACCAA+CGG | - | chr2_2:4179711-4179730 | Msa0231850:CDS | 40.0% | |
| AGTCTCTTAGGTATATTGGC+AGG | - | chr2_2:4179891-4179910 | Msa0231850:intron | 40.0% | |
| ! | TTGGGCTTTTCTTATCAGCA+GGG | + | chr2_2:4180055-4180074 | None:intergenic | 40.0% |
| ! | TTTGGGCTTTTCTTATCAGC+AGG | + | chr2_2:4180056-4180075 | None:intergenic | 40.0% |
| GCTGATAAGAAAAGCCCAAA+TGG | - | chr2_2:4180056-4180075 | Msa0231850:intron | 40.0% | |
| AAAGCCCAAATGGAAAGCTA+AGG | - | chr2_2:4180066-4180085 | Msa0231850:intron | 40.0% | |
| ATCTAGCATCCTTAGGTCTT+AGG | - | chr2_2:4180135-4180154 | Msa0231850:intron | 40.0% | |
| ACTAACTCTCCTAAGACCTA+AGG | + | chr2_2:4180147-4180166 | None:intergenic | 40.0% | |
| CTGAATTCTCCTAAGACCTA+AGG | - | chr2_2:4180194-4180213 | Msa0231850:intron | 40.0% | |
| GCCAAGTTCTCATCTATGTA+TGG | + | chr2_2:4180320-4180339 | None:intergenic | 40.0% | |
| TCATATTTGATGGAGCAAGC+AGG | - | chr2_2:4180457-4180476 | Msa0231850:intron | 40.0% | |
| GCATCTCTGCATCTTCAATA+TGG | - | chr2_2:4180591-4180610 | Msa0231850:CDS | 40.0% | |
| !!! | TTTTTTGCAGGCACTTGACT+TGG | - | chr2_2:4180760-4180779 | Msa0231850:CDS | 40.0% |
| TCGTAGCTTCCAAGGAATAT+TGG | + | chr2_2:4180812-4180831 | None:intergenic | 40.0% | |
| CAATTTCATCGTAGCTTCCA+AGG | + | chr2_2:4180820-4180839 | None:intergenic | 40.0% | |
| CAGTTCTGTTAGCATCTGCT+TGG | + | chr2_2:4177557-4177576 | None:intergenic | 45.0% | |
| !! | GCTGGATTGGCAAAAATCCT+AGG | - | chr2_2:4177814-4177833 | Msa0231850:intron | 45.0% |
| GCAAAAATCCTAGGACTTGC+TGG | - | chr2_2:4177823-4177842 | Msa0231850:intron | 45.0% | |
| GAAGTAGTGTGGTATCTCGT+TGG | + | chr2_2:4178066-4178085 | None:intergenic | 45.0% | |
| AAGTTTGCATAAACCGGTGG+AGG | + | chr2_2:4178291-4178310 | None:intergenic | 45.0% | |
| TTCACCACTATTTAAGGGGG+AGG | - | chr2_2:4178642-4178661 | Msa0231850:intron | 45.0% | |
| ! | GTGCCTTCTTGTTTCAGAAG+AGG | - | chr2_2:4178867-4178886 | Msa0231850:intron | 45.0% |
| GTTGAAGATGCATTGCAACC+TGG | - | chr2_2:4179234-4179253 | Msa0231850:intron | 45.0% | |
| CATGTATGGAAGCTCTTGCA+CGG | - | chr2_2:4179284-4179303 | Msa0231850:intron | 45.0% | |
| TTGCAGTTTGTGCTTAGCAC+AGG | - | chr2_2:4179462-4179481 | Msa0231850:intron | 45.0% | |
| AGCACAGGAAATGGAGTGAA+TGG | - | chr2_2:4179477-4179496 | Msa0231850:intron | 45.0% | |
| ATGAGGGAAACGCCAAAAAC+TGG | - | chr2_2:4179698-4179717 | Msa0231850:intron | 45.0% | |
| TGAGGGAAACGCCAAAAACT+GGG | - | chr2_2:4179699-4179718 | Msa0231850:intron | 45.0% | |
| !!! | CGTTGGTTCATCCCAGTTTT+TGG | + | chr2_2:4179713-4179732 | None:intergenic | 45.0% |
| ! | ACCAACGGCCAAGTAAGTTT+TGG | - | chr2_2:4179726-4179745 | Msa0231850:CDS | 45.0% |
| TCCAAAACTTACTTGGCCGT+TGG | + | chr2_2:4179730-4179749 | None:intergenic | 45.0% | |
| !! | TTTGGTGGTGAACTGTCTTG+TGG | + | chr2_2:4179872-4179891 | None:intergenic | 45.0% |
| GTTCACCACCAAAGTCTCTT+AGG | - | chr2_2:4179879-4179898 | Msa0231850:intron | 45.0% | |
| TAGGTTCTCGAACCTGCTAT+GGG | + | chr2_2:4180263-4180282 | None:intergenic | 45.0% | |
| TTAGGTTCTCGAACCTGCTA+TGG | + | chr2_2:4180264-4180283 | None:intergenic | 45.0% | |
| TATTTGATGGAGCAAGCAGG+AGG | - | chr2_2:4180460-4180479 | Msa0231850:intron | 45.0% | |
| GATCGATCGCCAATATTCCT+TGG | - | chr2_2:4180800-4180819 | Msa0231850:CDS | 45.0% | |
| ! | TGGTGTGTCCGCACATGTTT+TGG | + | chr2_2:4178247-4178266 | None:intergenic | 50.0% |
| TGCTCCTCCCCCTTAAATAG+TGG | + | chr2_2:4178649-4178668 | None:intergenic | 50.0% | |
| GGGGGAGGAGCAAAAGAAAT+TGG | - | chr2_2:4178657-4178676 | Msa0231850:intron | 50.0% | |
| GTGAAGGCCTTAATCAGCAG+CGG | - | chr2_2:4178703-4178722 | Msa0231850:CDS | 50.0% | |
| ATTGCAACCTGGGAGCAGTT+TGG | - | chr2_2:4179245-4179264 | Msa0231850:intron | 50.0% | |
| GCAGCTGGTTACTGCATGTA+TGG | - | chr2_2:4179270-4179289 | Msa0231850:intron | 50.0% | |
| TATGGGCCTAACTCCTGAGT+CGG | + | chr2_2:4180246-4180265 | None:intergenic | 50.0% | |
| TGGTGTCTCCAGCAAGTCCT+AGG | + | chr2_2:4177834-4177853 | None:intergenic | 55.0% | |
| ! | TGTGCGTCCGCTGCTGATTA+AGG | + | chr2_2:4178713-4178732 | None:intergenic | 55.0% |
| !! | GGACATTTCCTTGCCGACTC+AGG | - | chr2_2:4180230-4180249 | Msa0231850:intron | 55.0% |
| !! | TCCTTGCCGACTCAGGAGTT+AGG | - | chr2_2:4180237-4180256 | Msa0231850:intron | 55.0% |
| TCAGGAGTTAGGCCCATAGC+AGG | - | chr2_2:4180248-4180267 | Msa0231850:intron | 55.0% | |
| GCAGGAGGTCAAGCTTTCAC+AGG | - | chr2_2:4180475-4180494 | Msa0231850:intron | 55.0% | |
| ! | TGACTTGCCACGCTGTGCTG+GGG | + | chr2_2:4178914-4178933 | None:intergenic | 60.0% |
| ! | CTGACTTGCCACGCTGTGCT+GGG | + | chr2_2:4178915-4178934 | None:intergenic | 60.0% |
| !! | ACTGACTTGCCACGCTGTGC+TGG | + | chr2_2:4178916-4178935 | None:intergenic | 60.0% |
| GCTGCTACCAAACTGCTCCC+AGG | + | chr2_2:4179255-4179274 | None:intergenic | 60.0% | |
| ! | GGGAGCAGTTTGGTAGCAGC+TGG | - | chr2_2:4179255-4179274 | Msa0231850:intron | 60.0% |
| GCCTAACTCCTGAGTCGGCA+AGG | + | chr2_2:4180241-4180260 | None:intergenic | 60.0% | |
| ATTGTGCCCCCAGCACAGCG+TGG | - | chr2_2:4178904-4178923 | Msa0231850:CDS | 65.0% | |
| GACTTGCCACGCTGTGCTGG+GGG | + | chr2_2:4178913-4178932 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 4177546 | 4180886 | 4177546 | ID=Msa0231850;Name=Msa0231850 |
| chr2_2 | mRNA | 4177546 | 4180886 | 4177546 | ID=Msa0231850-mRNA-1;Parent=Msa0231850;Name=Msa0231850-mRNA-1;_AED=0.13;_eAED=0.14;_QI=0|0.18|0.08|1|1|1|12|0|342 |
| chr2_2 | exon | 4180728 | 4180886 | 4180728 | ID=Msa0231850-mRNA-1:exon:1711;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4180571 | 4180618 | 4180571 | ID=Msa0231850-mRNA-1:exon:1710;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4179700 | 4179774 | 4179700 | ID=Msa0231850-mRNA-1:exon:1709;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4179503 | 4179564 | 4179503 | ID=Msa0231850-mRNA-1:exon:1708;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4179345 | 4179411 | 4179345 | ID=Msa0231850-mRNA-1:exon:1707;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4179127 | 4179240 | 4179127 | ID=Msa0231850-mRNA-1:exon:1706;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4178878 | 4178964 | 4178878 | ID=Msa0231850-mRNA-1:exon:1705;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4178695 | 4178765 | 4178695 | ID=Msa0231850-mRNA-1:exon:1704;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4178520 | 4178585 | 4178520 | ID=Msa0231850-mRNA-1:exon:1703;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4178345 | 4178431 | 4178345 | ID=Msa0231850-mRNA-1:exon:1702;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4177925 | 4178000 | 4177925 | ID=Msa0231850-mRNA-1:exon:1701;Parent=Msa0231850-mRNA-1 |
| chr2_2 | exon | 4177546 | 4177662 | 4177546 | ID=Msa0231850-mRNA-1:exon:1700;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4180728 | 4180886 | 4180728 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4180571 | 4180618 | 4180571 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4179700 | 4179774 | 4179700 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4179503 | 4179564 | 4179503 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4179345 | 4179411 | 4179345 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4179127 | 4179240 | 4179127 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4178878 | 4178964 | 4178878 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4178695 | 4178765 | 4178695 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4178520 | 4178585 | 4178520 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4178345 | 4178431 | 4178345 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4177925 | 4178000 | 4177925 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| chr2_2 | CDS | 4177546 | 4177662 | 4177546 | ID=Msa0231850-mRNA-1:cds;Parent=Msa0231850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
