Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069270 | XP_039683923.1 | 98.349 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 0.0 | 872 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069270 | sp|Q8H0Z4|GT121_ARATH | 61.871 | 417 | 115 | 7 | 1 | 415 | 3 | 377 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069270 | G7KV66 | 98.349 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 0.0 | 870 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa1069270 | 0.802479 | 5.501288e-49 | -8.615850e-47 |
| Msa0024500 | Msa1069270 | -0.801350 | 9.385527e-49 | -8.615850e-47 |
| Msa0037180 | Msa1069270 | 0.853822 | 1.853309e-61 | -8.615850e-47 |
| Msa0037280 | Msa1069270 | 0.800951 | 1.132385e-48 | -8.615850e-47 |
| Msa0067750 | Msa1069270 | -0.816184 | 6.303013e-52 | -8.615850e-47 |
| Msa0075990 | Msa1069270 | -0.804679 | 1.923854e-49 | -8.615850e-47 |
| Msa0076640 | Msa1069270 | 0.836675 | 8.141330e-57 | -8.615850e-47 |
| Msa0092220 | Msa1069270 | 0.830905 | 2.256680e-55 | -8.615850e-47 |
| Msa0610230 | Msa1069270 | 0.801376 | 9.271749e-49 | -8.615850e-47 |
| Msa0612580 | Msa1069270 | 0.824220 | 9.084983e-54 | -8.615850e-47 |
| Msa0614290 | Msa1069270 | 0.840727 | 7.307076e-58 | -8.615850e-47 |
| Msa0636740 | Msa1069270 | 0.809807 | 1.576062e-50 | -8.615850e-47 |
| Msa0636770 | Msa1069270 | 0.807989 | 3.860892e-50 | -8.615850e-47 |
| Msa0638810 | Msa1069270 | 0.836453 | 9.273311e-57 | -8.615850e-47 |
| Msa0638820 | Msa1069270 | 0.829910 | 3.951339e-55 | -8.615850e-47 |
| Msa0645450 | Msa1069270 | 0.811870 | 5.639457e-51 | -8.615850e-47 |
| Msa0658510 | Msa1069270 | 0.806899 | 6.574902e-50 | -8.615850e-47 |
| Msa0660650 | Msa1069270 | 0.803605 | 3.219504e-49 | -8.615850e-47 |
| Msa0672090 | Msa1069270 | 0.803381 | 3.581969e-49 | -8.615850e-47 |
| Msa0672950 | Msa1069270 | 0.804904 | 1.726336e-49 | -8.615850e-47 |
| Msa0672980 | Msa1069270 | 0.810178 | 1.311710e-50 | -8.615850e-47 |
| Msa0695630 | Msa1069270 | 0.812615 | 3.878847e-51 | -8.615850e-47 |
| Msa0695650 | Msa1069270 | 0.801594 | 8.366217e-49 | -8.615850e-47 |
| Msa0697510 | Msa1069270 | 0.842027 | 3.322788e-58 | -8.615850e-47 |
| Msa0697520 | Msa1069270 | 0.836560 | 8.710806e-57 | -8.615850e-47 |
| Msa0705520 | Msa1069270 | 0.815603 | 8.496394e-52 | -8.615850e-47 |
| Msa0741170 | Msa1069270 | 0.815423 | 9.315372e-52 | -8.615850e-47 |
| Msa0127910 | Msa1069270 | -0.821219 | 4.535881e-53 | -8.615850e-47 |
| Msa0134270 | Msa1069270 | 0.806931 | 6.473918e-50 | -8.615850e-47 |
| Msa0146210 | Msa1069270 | 0.808129 | 3.605011e-50 | -8.615850e-47 |
| Msa0159240 | Msa1069270 | -0.823568 | 1.291715e-53 | -8.615850e-47 |
| Msa0167150 | Msa1069270 | -0.805775 | 1.134118e-49 | -8.615850e-47 |
| Msa0174060 | Msa1069270 | -0.808376 | 3.193123e-50 | -8.615850e-47 |
| Msa0177320 | Msa1069270 | 0.851965 | 6.293298e-61 | -8.615850e-47 |
| Msa0194750 | Msa1069270 | -0.807714 | 4.416899e-50 | -8.615850e-47 |
| Msa0216150 | Msa1069270 | -0.829299 | 5.564425e-55 | -8.615850e-47 |
| Msa0224210 | Msa1069270 | 0.859816 | 3.184235e-63 | -8.615850e-47 |
| Msa0225070 | Msa1069270 | -0.804104 | 2.535256e-49 | -8.615850e-47 |
| Msa0231850 | Msa1069270 | 0.802131 | 6.488578e-49 | -8.615850e-47 |
| Msa0238140 | Msa1069270 | 0.837386 | 5.360280e-57 | -8.615850e-47 |
| Msa0368620 | Msa1069270 | 0.829831 | 4.130576e-55 | -8.615850e-47 |
| Msa0389710 | Msa1069270 | 0.835614 | 1.514792e-56 | -8.615850e-47 |
| Msa0390590 | Msa1069270 | -0.820661 | 6.096670e-53 | -8.615850e-47 |
| Msa0390790 | Msa1069270 | 0.861925 | 7.282420e-64 | -8.615850e-47 |
| Msa0403740 | Msa1069270 | -0.811000 | 8.712596e-51 | -8.615850e-47 |
| Msa0416040 | Msa1069270 | 0.814790 | 1.287310e-51 | -8.615850e-47 |
| Msa0427560 | Msa1069270 | 0.809751 | 1.620485e-50 | -8.615850e-47 |
| Msa0456450 | Msa1069270 | -0.809457 | 1.874271e-50 | -8.615850e-47 |
| Msa0480260 | Msa1069270 | 0.828273 | 9.854728e-55 | -8.615850e-47 |
| Msa1030260 | Msa1069270 | 0.843698 | 1.194018e-58 | -8.615850e-47 |
| Msa1069270 | Msa1093190 | -0.804473 | 2.124069e-49 | -8.615850e-47 |
| Msa1069270 | Msa1120560 | 0.892813 | 1.122848e-74 | -8.615850e-47 |
| Msa1069270 | Msa1157130 | 0.832300 | 1.022660e-55 | -8.615850e-47 |
| Msa1069270 | Msa1174280 | 0.801134 | 1.038885e-48 | -8.615850e-47 |
| Msa1069270 | Msa1177650 | 0.802919 | 4.463671e-49 | -8.615850e-47 |
| Msa1069270 | Msa1205270 | -0.815862 | 7.437054e-52 | -8.615850e-47 |
| Msa1069270 | Msa1209470 | 0.807373 | 5.216768e-50 | -8.615850e-47 |
| Msa1069270 | Msa1220850 | 0.816725 | 4.770099e-52 | -8.615850e-47 |
| Msa1069270 | Msa1221270 | 0.817841 | 2.675297e-52 | -8.615850e-47 |
| Msa1069270 | Msa1297220 | -0.803728 | 3.034443e-49 | -8.615850e-47 |
| Msa1069270 | Msa1317740 | 0.800062 | 1.718507e-48 | -8.615850e-47 |
| Msa1069270 | Msa1330400 | 0.807821 | 4.191044e-50 | -8.615850e-47 |
| Msa1069270 | Msa1342360 | -0.809198 | 2.130204e-50 | -8.615850e-47 |
| Msa1069270 | Msa1344930 | 0.831294 | 1.811549e-55 | -8.615850e-47 |
| Msa1069270 | Msa1345390 | 0.814425 | 1.550980e-51 | -8.615850e-47 |
| Msa1069270 | Msa1350580 | -0.820066 | 8.348781e-53 | -8.615850e-47 |
| Msa1069270 | Msa1373310 | -0.805330 | 1.406307e-49 | -8.615850e-47 |
| Msa1069270 | Msa1373990 | 0.809229 | 2.097568e-50 | -8.615850e-47 |
| Msa1069270 | Msa1377980 | -0.808115 | 3.628256e-50 | -8.615850e-47 |
| Msa1069270 | Msa1402300 | 0.803187 | 3.929949e-49 | -8.615850e-47 |
| Msa1069270 | Msa1408280 | -0.806955 | 6.397011e-50 | -8.615850e-47 |
| Msa1069270 | Msa1411370 | 0.803794 | 2.940743e-49 | -8.615850e-47 |
| Msa1069270 | Msa1439860 | 0.803235 | 3.839521e-49 | -8.615850e-47 |
| Msa0246140 | Msa1069270 | 0.823176 | 1.594534e-53 | -8.615850e-47 |
| Msa0254640 | Msa1069270 | 0.808675 | 2.756015e-50 | -8.615850e-47 |
| Msa0256540 | Msa1069270 | 0.828386 | 9.252326e-55 | -8.615850e-47 |
| Msa0265480 | Msa1069270 | 0.834728 | 2.534502e-56 | -8.615850e-47 |
| Msa0284730 | Msa1069270 | 0.822256 | 2.611385e-53 | -8.615850e-47 |
| Msa0294200 | Msa1069270 | 0.816720 | 4.782413e-52 | -8.615850e-47 |
| Msa0319680 | Msa1069270 | 0.806695 | 7.260970e-50 | -8.615850e-47 |
| Msa0334320 | Msa1069270 | 0.810790 | 9.675957e-51 | -8.615850e-47 |
| Msa0340370 | Msa1069270 | 0.855233 | 7.239821e-62 | -8.615850e-47 |
| Msa0364030 | Msa1069270 | -0.810681 | 1.021342e-50 | -8.615850e-47 |
| Msa0537210 | Msa1069270 | 0.807076 | 6.030719e-50 | -8.615850e-47 |
| Msa0538050 | Msa1069270 | -0.801257 | 9.806644e-49 | -8.615850e-47 |
| Msa0557910 | Msa1069270 | 0.816256 | 6.072899e-52 | -8.615850e-47 |
| Msa0560280 | Msa1069270 | 0.848526 | 5.794305e-60 | -8.615850e-47 |
| Msa0572730 | Msa1069270 | -0.810384 | 1.184161e-50 | -8.615850e-47 |
| Msa0580210 | Msa1069270 | 0.801133 | 1.039706e-48 | -8.615850e-47 |
| Msa0581350 | Msa1069270 | 0.817036 | 4.061182e-52 | -8.615850e-47 |
| Msa0861820 | Msa1069270 | 0.815256 | 1.014669e-51 | -8.615850e-47 |
| Msa0867470 | Msa1069270 | 0.818390 | 2.009386e-52 | -8.615850e-47 |
| Msa0914710 | Msa1069270 | 0.815570 | 8.639238e-52 | -8.615850e-47 |
| Msa0975950 | Msa1069270 | 0.804043 | 2.610991e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069270 | MtrunA17_Chr7g0251151 | 98.349 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 0.0 | 870 |
| Msa1069270 | MtrunA17_Chr1g0209331 | 70.983 | 417 | 117 | 3 | 2 | 415 | 3 | 418 | 0.0 | 627 |
| Msa1069270 | MtrunA17_Chr6g0449141 | 74.599 | 374 | 71 | 8 | 55 | 423 | 1 | 355 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069270 | AT5G38200.1 | 74.882 | 422 | 102 | 3 | 3 | 421 | 11 | 431 | 0.0 | 657 |
| Msa1069270 | AT1G66860.1 | 71.765 | 425 | 116 | 3 | 3 | 424 | 7 | 430 | 0.0 | 639 |
| Msa1069270 | AT5G38200.2 | 77.907 | 344 | 72 | 3 | 3 | 343 | 11 | 353 | 0.0 | 552 |
| Msa1069270 | AT5G38200.3 | 76.791 | 349 | 77 | 3 | 3 | 348 | 11 | 358 | 0.0 | 551 |
| Msa1069270 | AT1G15040.1 | 61.871 | 417 | 115 | 7 | 1 | 415 | 3 | 377 | 0.0 | 519 |
| Msa1069270 | AT1G15040.2 | 67.500 | 320 | 86 | 5 | 1 | 318 | 3 | 306 | 1.23e-155 | 443 |
Find 115 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATTATTCCTTTCTTTATT+TGG | 0.151809 | 7_2:-64777489 | Msa1069270:three_prime_UTR |
| TAAAATTTGGATAAGGATTA+AGG | 0.175327 | 7_2:+64779932 | None:intergenic |
| ACCTTTGCATCATTGGTTTA+AGG | 0.188726 | 7_2:-64778918 | Msa1069270:CDS |
| GTCATAGTTCCACGTGTTTC+CGG | 0.202387 | 7_2:-64779337 | Msa1069270:CDS |
| AGAAGAGGGTAAGTTTATTA+TGG | 0.212954 | 7_2:-64778750 | Msa1069270:CDS |
| ATATTTATATGATTAAAATT+TGG | 0.230737 | 7_2:+64779919 | None:intergenic |
| AGGATGCCCCTTTGCTTATC+AGG | 0.230952 | 7_2:-64778669 | Msa1069270:intron |
| ACAGATTTGTTCTGAAGTTT+TGG | 0.231256 | 7_2:-64777655 | Msa1069270:CDS |
| TTCTTGAAGCTCAGATTCTT+TGG | 0.233907 | 7_2:+64778228 | None:intergenic |
| TGTCACTTATATTATATAAA+TGG | 0.266320 | 7_2:-64777354 | None:intergenic |
| AAAGCCTCTAAAACTTAATA+AGG | 0.285443 | 7_2:-64778335 | Msa1069270:CDS |
| TTTGGTAAGAGTGCTCATTT+TGG | 0.289772 | 7_2:-64777471 | Msa1069270:three_prime_UTR |
| AAAATACACCTTTGCATCAT+TGG | 0.290589 | 7_2:-64778925 | Msa1069270:CDS |
| TTCTTTGGAAGATGATAAAA+TGG | 0.302548 | 7_2:-64778894 | Msa1069270:CDS |
| AGATGATAAAATGGACATTA+TGG | 0.311048 | 7_2:-64778885 | Msa1069270:CDS |
| ATAATAAACTTACCCTCTTC+TGG | 0.314503 | 7_2:+64778752 | None:intergenic |
| TCATAGTTCCACGTGTTTCC+GGG | 0.320130 | 7_2:-64779336 | Msa1069270:CDS |
| GGTACTTTATATCAAGATAT+AGG | 0.325689 | 7_2:-64779046 | Msa1069270:CDS |
| TCATTGGTTTAAGGATTCTT+TGG | 0.326878 | 7_2:-64778909 | Msa1069270:CDS |
| GAAGAGGGTAAGTTTATTAT+GGG | 0.330211 | 7_2:-64778749 | Msa1069270:CDS |
| GTTTCTTTCAAGACAAAGTT+TGG | 0.332368 | 7_2:+64779123 | None:intergenic |
| CTTGTCTTTCTATCACACTA+TGG | 0.360794 | 7_2:-64777679 | Msa1069270:CDS |
| TGAAAGAAACATTCCTTACT+TGG | 0.361983 | 7_2:-64779110 | Msa1069270:CDS |
| AGAGAAAAGGTTAAAGCAAA+TGG | 0.371811 | 7_2:-64777817 | Msa1069270:CDS |
| ACATACTATGATTTATGAAA+TGG | 0.377593 | 7_2:+64777391 | None:intergenic |
| GAGCTGACATTAATATATAT+AGG | 0.385337 | 7_2:+64779985 | None:intergenic |
| TCTTCTGGATTATAAGCATC+AGG | 0.386183 | 7_2:+64778767 | None:intergenic |
| CTCCTGATGGTTTGATTGAA+GGG | 0.397165 | 7_2:-64778799 | Msa1069270:CDS |
| ATATGATTAAAATTTGGATA+AGG | 0.401307 | 7_2:+64779925 | None:intergenic |
| GCTCCTGATGGTTTGATTGA+AGG | 0.402159 | 7_2:-64778800 | Msa1069270:CDS |
| TCTAAAACTTAATAAGGAAA+TGG | 0.405237 | 7_2:-64778329 | Msa1069270:CDS |
| AGCTGACATTAATATATATA+GGG | 0.407117 | 7_2:+64779986 | None:intergenic |
| CAAAGCTATCTAACAACATA+TGG | 0.407726 | 7_2:+64779311 | None:intergenic |
| GTACTTTATATCAAGATATA+GGG | 0.427133 | 7_2:-64779045 | Msa1069270:CDS |
| ACGAACATTTCTTAATAACT+TGG | 0.438462 | 7_2:-64779824 | Msa1069270:five_prime_UTR |
| GACCTCTACAATCATGGCCT+TGG | 0.440274 | 7_2:-64778262 | Msa1069270:CDS |
| TCTGATGAATTTGATTATCC+AGG | 0.456144 | 7_2:-64778689 | Msa1069270:CDS |
| ATAAGGAAATGGAGAACAAA+AGG | 0.459754 | 7_2:-64778318 | Msa1069270:CDS |
| TTGAAGCTCAGATTCTTTGG+TGG | 0.460011 | 7_2:+64778231 | None:intergenic |
| GATTTATGAAATGGATAAAG+TGG | 0.465962 | 7_2:+64777400 | None:intergenic |
| TGATAAGCAAAGGGGCATCC+TGG | 0.476576 | 7_2:+64778671 | None:intergenic |
| AACCCTTCAATCAAACCATC+AGG | 0.478520 | 7_2:+64778797 | None:intergenic |
| CGAATTACCTGATAAGCAAA+GGG | 0.482699 | 7_2:+64778662 | None:intergenic |
| AGCAAATGGGTGCAACAGTT+AGG | 0.485989 | 7_2:-64777803 | Msa1069270:CDS |
| TTTCTCTTGCTGCACACTCA+AGG | 0.486814 | 7_2:+64777833 | None:intergenic |
| CATAGAAGCACGCCATGGAT+TGG | 0.488632 | 7_2:+64779286 | None:intergenic |
| CCTCTACAAATTCCCAAGTA+AGG | 0.489708 | 7_2:+64779097 | None:intergenic |
| GAGAAAAGGTTAAAGCAAAT+GGG | 0.508467 | 7_2:-64777816 | Msa1069270:CDS |
| GAAATGTTCGTGTAGTATAG+AGG | 0.509497 | 7_2:+64779836 | None:intergenic |
| CACTCTTACCAAATAAAGAA+AGG | 0.511298 | 7_2:+64777481 | None:intergenic |
| AACGAACTTGTTCTTGCGAA+GGG | 0.515604 | 7_2:+64779715 | None:intergenic |
| GAAAGAAACATTCCTTACTT+GGG | 0.524058 | 7_2:-64779109 | Msa1069270:CDS |
| GGTGCAACAGTTAGGAATGC+AGG | 0.528138 | 7_2:-64777795 | Msa1069270:CDS |
| TGAGTGTGCAGCAAGAGAAA+AGG | 0.530349 | 7_2:-64777830 | Msa1069270:CDS |
| ATTAACTATGATGATTATGA+TGG | 0.531284 | 7_2:-64778974 | Msa1069270:CDS |
| CAACGAACTTGTTCTTGCGA+AGG | 0.532178 | 7_2:+64779714 | None:intergenic |
| AAAGAATCTGAGCTTCAAGA+AGG | 0.532850 | 7_2:-64778226 | Msa1069270:CDS |
| GGGAAAGAGCTTTCAAACAA+GGG | 0.534109 | 7_2:-64779025 | Msa1069270:CDS |
| TTGTCTTTCTATCACACTAT+GGG | 0.536270 | 7_2:-64777678 | Msa1069270:CDS |
| ACATTAATATATATAGGGAA+TGG | 0.537441 | 7_2:+64779991 | None:intergenic |
| GCAAAAGACCTCTACAATCA+TGG | 0.537541 | 7_2:-64778268 | Msa1069270:CDS |
| AAGAATCTGAGCTTCAAGAA+GGG | 0.539322 | 7_2:-64778225 | Msa1069270:CDS |
| CCTTACTTGGGAATTTGTAG+AGG | 0.541458 | 7_2:-64779097 | Msa1069270:CDS |
| TCGAATTACCTGATAAGCAA+AGG | 0.541505 | 7_2:+64778661 | None:intergenic |
| CCATCAGGAGCAAAAGCCAT+TGG | 0.542834 | 7_2:+64778812 | None:intergenic |
| AGGGAAAGAGCTTTCAAACA+AGG | 0.547406 | 7_2:-64779026 | Msa1069270:CDS |
| CTTGATCTTATAGTCGGCTA+TGG | 0.548943 | 7_2:-64779370 | Msa1069270:CDS |
| ACAATGTCTTCTGACCTATC+CGG | 0.557585 | 7_2:-64779773 | Msa1069270:CDS |
| GTTAATAGCTATCATCATCA+AGG | 0.559848 | 7_2:-64778863 | Msa1069270:CDS |
| CTTACTTGGGAATTTGTAGA+GGG | 0.563096 | 7_2:-64779096 | Msa1069270:CDS |
| CACATCATGTCTTTCTCAAG+AGG | 0.563983 | 7_2:-64779224 | Msa1069270:CDS |
| TCCTTAAACCAATGATGCAA+AGG | 0.567486 | 7_2:+64778917 | None:intergenic |
| CATAGCCGACTATAAGATCA+AGG | 0.569028 | 7_2:+64779371 | None:intergenic |
| AAAATGGCAAGAAGTATGAT+GGG | 0.569077 | 7_2:-64777732 | Msa1069270:CDS |
| AAATTTGCAGGAATTTGTAA+AGG | 0.569537 | 7_2:-64778398 | Msa1069270:intron |
| CAGTTGTTGCTTATCAGAAG+AGG | 0.574778 | 7_2:-64778375 | Msa1069270:CDS |
| GAGAAGACATTGATCCATCA+TGG | 0.578667 | 7_2:-64779258 | Msa1069270:CDS |
| ATTTATGAAATGGATAAAGT+GGG | 0.581323 | 7_2:+64777401 | None:intergenic |
| GAAACACGTGGAACTATGAC+CGG | 0.585277 | 7_2:+64779340 | None:intergenic |
| CACGAGGGAGAATGCCGGAT+AGG | 0.586423 | 7_2:+64779759 | None:intergenic |
| TAGAACACGAGGGAGAATGC+CGG | 0.587130 | 7_2:+64779754 | None:intergenic |
| TATCACCTTGATCTTATAGT+CGG | 0.588888 | 7_2:-64779376 | Msa1069270:CDS |
| AGAGAGAATGAAGCAGAATG+AGG | 0.589974 | 7_2:-64777763 | Msa1069270:CDS |
| GATAGCTTTGAACCAATCCA+TGG | 0.594720 | 7_2:-64779298 | Msa1069270:CDS |
| GTGTCTTCCTCGTACCATGA+TGG | 0.596983 | 7_2:+64779244 | None:intergenic |
| TGATGCTTATAATCCAGAAG+AGG | 0.598955 | 7_2:-64778765 | Msa1069270:CDS |
| CATAGTTCCACGTGTTTCCG+GGG | 0.599219 | 7_2:-64779335 | Msa1069270:CDS |
| AGAATCTGAGCTTCAAGAAG+GGG | 0.605392 | 7_2:-64778224 | Msa1069270:CDS |
| ATGTTCGTGTAGTATAGAGG+TGG | 0.606645 | 7_2:+64779839 | None:intergenic |
| CTTAGTACAAATACTACACA+TGG | 0.608565 | 7_2:+64777560 | None:intergenic |
| GATGCTTATAATCCAGAAGA+GGG | 0.613931 | 7_2:-64778764 | Msa1069270:CDS |
| ATGGTCAACAAAAGACAAAG+AGG | 0.617881 | 7_2:+64777579 | None:intergenic |
| AATGTCAGCTCACAAAACAA+TGG | 0.621915 | 7_2:-64779973 | Msa1069270:five_prime_UTR |
| CTAGAAACTATTAGAACACG+AGG | 0.624352 | 7_2:+64779743 | None:intergenic |
| GATGTGCTACACATGGGACA+TGG | 0.625120 | 7_2:-64777534 | Msa1069270:three_prime_UTR |
| CATGGCGTGCTTCTATGTGA+AGG | 0.625793 | 7_2:-64779280 | Msa1069270:CDS |
| TAAGTTTGATGTGCTACACA+TGG | 0.627426 | 7_2:-64777541 | Msa1069270:three_prime_UTR |
| TCAACAAAAGACAAAGAGGT+AGG | 0.629211 | 7_2:+64777583 | None:intergenic |
| CTTTGGTGGAGTTCATACCA+AGG | 0.629408 | 7_2:+64778245 | None:intergenic |
| CTTCTAAATGTGGCATGTGG+AGG | 0.629521 | 7_2:-64779067 | Msa1069270:CDS |
| CAACTTCTAAATGTGGCATG+TGG | 0.641956 | 7_2:-64779070 | Msa1069270:CDS |
| AGAAGGGGCAGAGTTTCTAG+AGG | 0.642561 | 7_2:-64778209 | Msa1069270:intron |
| ATCTAACAACATATGGACCC+CGG | 0.643500 | 7_2:+64779318 | None:intergenic |
| CTTCTGGATTATAAGCATCA+GGG | 0.643591 | 7_2:+64778768 | None:intergenic |
| TACCAAGGCCATGATTGTAG+AGG | 0.646791 | 7_2:+64778260 | None:intergenic |
| ATATGGACCCCGGAAACACG+TGG | 0.647974 | 7_2:+64779328 | None:intergenic |
| AGGGTCACAACTTCTAAATG+TGG | 0.648276 | 7_2:-64779077 | Msa1069270:CDS |
| CTTCACATAGAAGCACGCCA+TGG | 0.653885 | 7_2:+64779281 | None:intergenic |
| AAGTTTGATGTGCTACACAT+GGG | 0.661570 | 7_2:-64777540 | Msa1069270:three_prime_UTR |
| CATTGATCCATCATGGTACG+AGG | 0.661592 | 7_2:-64779251 | Msa1069270:CDS |
| TCTTATAGTCGGCTATGGCG+CGG | 0.674953 | 7_2:-64779365 | Msa1069270:CDS |
| TTATGATGGTCATAGACATG+AGG | 0.696322 | 7_2:-64778960 | Msa1069270:CDS |
| GAATTACCTGATAAGCAAAG+GGG | 0.697423 | 7_2:+64778663 | None:intergenic |
| AGGAATAATACAAAAGTACG+AGG | 0.724267 | 7_2:+64777501 | None:intergenic |
| TAGAAACTATTAGAACACGA+GGG | 0.757631 | 7_2:+64779744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGATTAAAATTTGGATA+AGG | + | chr7_2:64777455-64777474 | None:intergenic | 15.0% |
| !!! | ATTACATGATTATTGTTTTT+AGG | - | chr7_2:64777974-64777993 | Msa1069270:intron | 15.0% |
| !! | ACTAGTTAATAATAATGTAT+TGG | + | chr7_2:64778930-64778949 | None:intergenic | 15.0% |
| !! | ACATTAATATATATAGGGAA+TGG | + | chr7_2:64777389-64777408 | None:intergenic | 20.0% |
| !! | AGCTGACATTAATATATATA+GGG | + | chr7_2:64777394-64777413 | None:intergenic | 20.0% |
| !! | TAAAATTTGGATAAGGATTA+AGG | + | chr7_2:64777448-64777467 | None:intergenic | 20.0% |
| !!! | ATGTTTATGTTGATTTCAAA+TGG | + | chr7_2:64777723-64777742 | None:intergenic | 20.0% |
| !! | TCTATATAAAGAGTTTGATA+AGG | + | chr7_2:64777752-64777771 | None:intergenic | 20.0% |
| !! | ATCATTCAATATGAATTCTA+AGG | - | chr7_2:64777805-64777824 | Msa1069270:CDS | 20.0% |
| !! | GTACTTTATATCAAGATATA+GGG | - | chr7_2:64778332-64778351 | Msa1069270:CDS | 20.0% |
| !! | ATTAACTATGATGATTATGA+TGG | - | chr7_2:64778403-64778422 | Msa1069270:intron | 20.0% |
| !! | ATAGTACTATTTCCATTTAT+TGG | - | chr7_2:64778817-64778836 | Msa1069270:CDS | 20.0% |
| !!! | ATTTCCTTATTAAGTTTTAG+AGG | + | chr7_2:64779049-64779068 | None:intergenic | 20.0% |
| !!! | TCTAAAACTTAATAAGGAAA+TGG | - | chr7_2:64779048-64779067 | Msa1069270:CDS | 20.0% |
| !!! | CATAGGAATATATAGTTTTT+TGG | - | chr7_2:64779370-64779389 | Msa1069270:CDS | 20.0% |
| !! | AAATCAAATATAATTGATGG+CGG | + | chr7_2:64779473-64779492 | None:intergenic | 20.0% |
| !! | GTGAAATCAAATATAATTGA+TGG | + | chr7_2:64779476-64779495 | None:intergenic | 20.0% |
| !! | GTATTATTCCTTTCTTTATT+TGG | - | chr7_2:64779888-64779907 | Msa1069270:five_prime_UTR | 20.0% |
| !!! | ACACTTTAGTATTTTTTTTG+AGG | - | chr7_2:64779931-64779950 | Msa1069270:five_prime_UTR | 20.0% |
| !!! | CACTTTAGTATTTTTTTTGA+GGG | - | chr7_2:64779932-64779951 | Msa1069270:five_prime_UTR | 20.0% |
| !!! | ACTTTAGTATTTTTTTTGAG+GGG | - | chr7_2:64779933-64779952 | Msa1069270:five_prime_UTR | 20.0% |
| !! | ATTTATGAAATGGATAAAGT+GGG | + | chr7_2:64779979-64779998 | None:intergenic | 20.0% |
| !! | ACATACTATGATTTATGAAA+TGG | + | chr7_2:64779989-64780008 | None:intergenic | 20.0% |
| ! | GAGCTGACATTAATATATAT+AGG | + | chr7_2:64777395-64777414 | None:intergenic | 25.0% |
| ! | ACGAACATTTCTTAATAACT+TGG | - | chr7_2:64777553-64777572 | Msa1069270:three_prime_UTR | 25.0% |
| ! | ATAGAAACAATAAGTTTGAG+AGG | + | chr7_2:64777849-64777868 | None:intergenic | 25.0% |
| ! | TCTTCATCTATTTGATTATG+TGG | - | chr7_2:64777877-64777896 | Msa1069270:intron | 25.0% |
| ! | GGTACTTTATATCAAGATAT+AGG | - | chr7_2:64778331-64778350 | Msa1069270:CDS | 25.0% |
| !! | TTCTTTGGAAGATGATAAAA+TGG | - | chr7_2:64778483-64778502 | Msa1069270:intron | 25.0% |
| ! | AGATGATAAAATGGACATTA+TGG | - | chr7_2:64778492-64778511 | Msa1069270:intron | 25.0% |
| !! | CTAAATTGATAGTTTCTTTC+TGG | + | chr7_2:64778744-64778763 | None:intergenic | 25.0% |
| ! | TACTATTTCCATTTATTGGA+GGG | - | chr7_2:64778821-64778840 | Msa1069270:CDS | 25.0% |
| ! | CAAAATTCATGAAAATTTGC+AGG | - | chr7_2:64778967-64778986 | Msa1069270:CDS | 25.0% |
| ! | AAATTTGCAGGAATTTGTAA+AGG | - | chr7_2:64778979-64778998 | Msa1069270:CDS | 25.0% |
| !!! | AAAGCCTCTAAAACTTAATA+AGG | - | chr7_2:64779042-64779061 | Msa1069270:CDS | 25.0% |
| !! | TAGTTAGAGTTATGCAATTT+TGG | - | chr7_2:64779416-64779435 | Msa1069270:intron | 25.0% |
| ! | GATTTATGAAATGGATAAAG+TGG | + | chr7_2:64779980-64779999 | None:intergenic | 25.0% |
| TAGAAACTATTAGAACACGA+GGG | + | chr7_2:64777636-64777655 | None:intergenic | 30.0% | |
| !!! | AACAAGTTCGTTGATTTTGT+TGG | - | chr7_2:64777673-64777692 | Msa1069270:CDS | 30.0% |
| TATCACCTTGATCTTATAGT+CGG | - | chr7_2:64778001-64778020 | Msa1069270:intron | 30.0% | |
| CAAAGCTATCTAACAACATA+TGG | + | chr7_2:64778069-64778088 | None:intergenic | 30.0% | |
| GTTTCTTTCAAGACAAAGTT+TGG | + | chr7_2:64778257-64778276 | None:intergenic | 30.0% | |
| TGAAAGAAACATTCCTTACT+TGG | - | chr7_2:64778267-64778286 | Msa1069270:CDS | 30.0% | |
| GAAAGAAACATTCCTTACTT+GGG | - | chr7_2:64778268-64778287 | Msa1069270:CDS | 30.0% | |
| AAAATACACCTTTGCATCAT+TGG | - | chr7_2:64778452-64778471 | Msa1069270:intron | 30.0% | |
| !! | TCATTGGTTTAAGGATTCTT+TGG | - | chr7_2:64778468-64778487 | Msa1069270:intron | 30.0% |
| GTTAATAGCTATCATCATCA+AGG | - | chr7_2:64778514-64778533 | Msa1069270:intron | 30.0% | |
| ATAATAAACTTACCCTCTTC+TGG | + | chr7_2:64778628-64778647 | None:intergenic | 30.0% | |
| AGAAGAGGGTAAGTTTATTA+TGG | - | chr7_2:64778627-64778646 | Msa1069270:intron | 30.0% | |
| GAAGAGGGTAAGTTTATTAT+GGG | - | chr7_2:64778628-64778647 | Msa1069270:intron | 30.0% | |
| TCTGATGAATTTGATTATCC+AGG | - | chr7_2:64778688-64778707 | Msa1069270:CDS | 30.0% | |
| GTACTATTTCCATTTATTGG+AGG | - | chr7_2:64778820-64778839 | Msa1069270:CDS | 30.0% | |
| ATAAGGAAATGGAGAACAAA+AGG | - | chr7_2:64779059-64779078 | Msa1069270:CDS | 30.0% | |
| AGAGAAAAGGTTAAAGCAAA+TGG | - | chr7_2:64779560-64779579 | Msa1069270:intron | 30.0% | |
| GAGAAAAGGTTAAAGCAAAT+GGG | - | chr7_2:64779561-64779580 | Msa1069270:intron | 30.0% | |
| GAATGAGGAAAGAGAAAAAA+TGG | - | chr7_2:64779629-64779648 | Msa1069270:intron | 30.0% | |
| ! | AAAAATGGCAAGAAGTATGA+TGG | - | chr7_2:64779644-64779663 | Msa1069270:intron | 30.0% |
| ! | AAAATGGCAAGAAGTATGAT+GGG | - | chr7_2:64779645-64779664 | Msa1069270:intron | 30.0% |
| ! | TATGATGGGAAAAATGTCAA+TGG | - | chr7_2:64779659-64779678 | Msa1069270:intron | 30.0% |
| TTGTCTTTCTATCACACTAT+GGG | - | chr7_2:64779699-64779718 | Msa1069270:intron | 30.0% | |
| !!! | ACAGATTTGTTCTGAAGTTT+TGG | - | chr7_2:64779722-64779741 | Msa1069270:CDS | 30.0% |
| CTTAGTACAAATACTACACA+TGG | + | chr7_2:64779820-64779839 | None:intergenic | 30.0% | |
| ! | AGGAATAATACAAAAGTACG+AGG | + | chr7_2:64779879-64779898 | None:intergenic | 30.0% |
| CACTCTTACCAAATAAAGAA+AGG | + | chr7_2:64779899-64779918 | None:intergenic | 30.0% | |
| AATGTCAGCTCACAAAACAA+TGG | - | chr7_2:64777404-64777423 | Msa1069270:three_prime_UTR | 35.0% | |
| GAAATGTTCGTGTAGTATAG+AGG | + | chr7_2:64777544-64777563 | None:intergenic | 35.0% | |
| CTAGAAACTATTAGAACACG+AGG | + | chr7_2:64777637-64777656 | None:intergenic | 35.0% | |
| CTTACTTGGGAATTTGTAGA+GGG | - | chr7_2:64778281-64778300 | Msa1069270:CDS | 35.0% | |
| TTATGATGGTCATAGACATG+AGG | - | chr7_2:64778417-64778436 | Msa1069270:intron | 35.0% | |
| !! | ACCTTTGCATCATTGGTTTA+AGG | - | chr7_2:64778459-64778478 | Msa1069270:intron | 35.0% |
| TCCTTAAACCAATGATGCAA+AGG | + | chr7_2:64778463-64778482 | None:intergenic | 35.0% | |
| CTTCTGGATTATAAGCATCA+GGG | + | chr7_2:64778612-64778631 | None:intergenic | 35.0% | |
| TCTTCTGGATTATAAGCATC+AGG | + | chr7_2:64778613-64778632 | None:intergenic | 35.0% | |
| TGATGCTTATAATCCAGAAG+AGG | - | chr7_2:64778612-64778631 | Msa1069270:intron | 35.0% | |
| GATGCTTATAATCCAGAAGA+GGG | - | chr7_2:64778613-64778632 | Msa1069270:intron | 35.0% | |
| GAATTACCTGATAAGCAAAG+GGG | + | chr7_2:64778717-64778736 | None:intergenic | 35.0% | |
| CGAATTACCTGATAAGCAAA+GGG | + | chr7_2:64778718-64778737 | None:intergenic | 35.0% | |
| TCGAATTACCTGATAAGCAA+AGG | + | chr7_2:64778719-64778738 | None:intergenic | 35.0% | |
| TACATTGTCCCTCCAATAAA+TGG | + | chr7_2:64778832-64778851 | None:intergenic | 35.0% | |
| ATTTATTGGAGGGACAATGT+AGG | - | chr7_2:64778831-64778850 | Msa1069270:CDS | 35.0% | |
| !! | TTTTAGAGGCTTTTGTACAG+AGG | + | chr7_2:64779035-64779054 | None:intergenic | 35.0% |
| TTCTTGAAGCTCAGATTCTT+TGG | + | chr7_2:64779152-64779171 | None:intergenic | 35.0% | |
| AAAGAATCTGAGCTTCAAGA+AGG | - | chr7_2:64779151-64779170 | Msa1069270:CDS | 35.0% | |
| AAGAATCTGAGCTTCAAGAA+GGG | - | chr7_2:64779152-64779171 | Msa1069270:CDS | 35.0% | |
| GAACACTAGACACATTCTAT+CGG | + | chr7_2:64779253-64779272 | None:intergenic | 35.0% | |
| GTCAATGTCAATGTTGTGTT+TGG | - | chr7_2:64779303-64779322 | Msa1069270:CDS | 35.0% | |
| TTCATGATGTGTTGCATCAT+AGG | - | chr7_2:64779353-64779372 | Msa1069270:CDS | 35.0% | |
| !! | ATTGATGGCGGTACTAAAAT+CGG | + | chr7_2:64779461-64779480 | None:intergenic | 35.0% |
| CTTGTCTTTCTATCACACTA+TGG | - | chr7_2:64779698-64779717 | Msa1069270:intron | 35.0% | |
| TCAACAAAAGACAAAGAGGT+AGG | + | chr7_2:64779797-64779816 | None:intergenic | 35.0% | |
| ATGGTCAACAAAAGACAAAG+AGG | + | chr7_2:64779801-64779820 | None:intergenic | 35.0% | |
| TAAGTTTGATGTGCTACACA+TGG | - | chr7_2:64779836-64779855 | Msa1069270:five_prime_UTR | 35.0% | |
| AAGTTTGATGTGCTACACAT+GGG | - | chr7_2:64779837-64779856 | Msa1069270:five_prime_UTR | 35.0% | |
| !!! | TTTGGTAAGAGTGCTCATTT+TGG | - | chr7_2:64779906-64779925 | Msa1069270:five_prime_UTR | 35.0% |
| ATGTTCGTGTAGTATAGAGG+TGG | + | chr7_2:64777541-64777560 | None:intergenic | 40.0% | |
| ACAATGTCTTCTGACCTATC+CGG | - | chr7_2:64777604-64777623 | Msa1069270:exon | 40.0% | |
| ! | AACGAACTTGTTCTTGCGAA+GGG | + | chr7_2:64777665-64777684 | None:intergenic | 40.0% |
| CATAGCCGACTATAAGATCA+AGG | + | chr7_2:64778009-64778028 | None:intergenic | 40.0% | |
| CTTGATCTTATAGTCGGCTA+TGG | - | chr7_2:64778007-64778026 | Msa1069270:intron | 40.0% | |
| ATCTAACAACATATGGACCC+CGG | + | chr7_2:64778062-64778081 | None:intergenic | 40.0% | |
| !! | GATAGCTTTGAACCAATCCA+TGG | - | chr7_2:64778079-64778098 | Msa1069270:intron | 40.0% |
| GAGAAGACATTGATCCATCA+TGG | - | chr7_2:64778119-64778138 | Msa1069270:intron | 40.0% | |
| CACATCATGTCTTTCTCAAG+AGG | - | chr7_2:64778153-64778172 | Msa1069270:intron | 40.0% | |
| CCTCTACAAATTCCCAAGTA+AGG | + | chr7_2:64778283-64778302 | None:intergenic | 40.0% | |
| CCTTACTTGGGAATTTGTAG+AGG | - | chr7_2:64778280-64778299 | Msa1069270:CDS | 40.0% | |
| AGGGTCACAACTTCTAAATG+TGG | - | chr7_2:64778300-64778319 | Msa1069270:CDS | 40.0% | |
| CAACTTCTAAATGTGGCATG+TGG | - | chr7_2:64778307-64778326 | Msa1069270:CDS | 40.0% | |
| AGGGAAAGAGCTTTCAAACA+AGG | - | chr7_2:64778351-64778370 | Msa1069270:CDS | 40.0% | |
| GGGAAAGAGCTTTCAAACAA+GGG | - | chr7_2:64778352-64778371 | Msa1069270:CDS | 40.0% | |
| !! | TGCACAACGTTTTGTTCCAA+TGG | - | chr7_2:64778549-64778568 | Msa1069270:intron | 40.0% |
| CTCCTGATGGTTTGATTGAA+GGG | - | chr7_2:64778578-64778597 | Msa1069270:intron | 40.0% | |
| AACCCTTCAATCAAACCATC+AGG | + | chr7_2:64778583-64778602 | None:intergenic | 40.0% | |
| ! | ATCAGCTTTTCTCATACGCT+CGG | + | chr7_2:64778668-64778687 | None:intergenic | 40.0% |
| ! | CAGTTGTTGCTTATCAGAAG+AGG | - | chr7_2:64779002-64779021 | Msa1069270:CDS | 40.0% |
| GCAAAAGACCTCTACAATCA+TGG | - | chr7_2:64779109-64779128 | Msa1069270:CDS | 40.0% | |
| TTGAAGCTCAGATTCTTTGG+TGG | + | chr7_2:64779149-64779168 | None:intergenic | 40.0% | |
| AGAATCTGAGCTTCAAGAAG+GGG | - | chr7_2:64779153-64779172 | Msa1069270:CDS | 40.0% | |
| AGAGAGAATGAAGCAGAATG+AGG | - | chr7_2:64779614-64779633 | Msa1069270:intron | 40.0% | |
| ! | CAACGAACTTGTTCTTGCGA+AGG | + | chr7_2:64777666-64777685 | None:intergenic | 45.0% |
| GAAACACGTGGAACTATGAC+CGG | + | chr7_2:64778040-64778059 | None:intergenic | 45.0% | |
| GTCATAGTTCCACGTGTTTC+CGG | - | chr7_2:64778040-64778059 | Msa1069270:intron | 45.0% | |
| TCATAGTTCCACGTGTTTCC+GGG | - | chr7_2:64778041-64778060 | Msa1069270:intron | 45.0% | |
| CATTGATCCATCATGGTACG+AGG | - | chr7_2:64778126-64778145 | Msa1069270:intron | 45.0% | |
| CTTCTAAATGTGGCATGTGG+AGG | - | chr7_2:64778310-64778329 | Msa1069270:CDS | 45.0% | |
| GCTCCTGATGGTTTGATTGA+AGG | - | chr7_2:64778577-64778596 | Msa1069270:intron | 45.0% | |
| ! | TCAGCTTTTCTCATACGCTC+GGG | + | chr7_2:64778667-64778686 | None:intergenic | 45.0% |
| GAGGGACAATGTAGGACAAA+TGG | - | chr7_2:64778839-64778858 | Msa1069270:CDS | 45.0% | |
| TACCAAGGCCATGATTGTAG+AGG | + | chr7_2:64779120-64779139 | None:intergenic | 45.0% | |
| CTTTGGTGGAGTTCATACCA+AGG | + | chr7_2:64779135-64779154 | None:intergenic | 45.0% | |
| ATCGGTCGGAAAACTCTAGA+GGG | + | chr7_2:64779443-64779462 | None:intergenic | 45.0% | |
| AATCGGTCGGAAAACTCTAG+AGG | + | chr7_2:64779444-64779463 | None:intergenic | 45.0% | |
| ATGGCGGTACTAAAATCGGT+CGG | + | chr7_2:64779457-64779476 | None:intergenic | 45.0% | |
| TTTCTCTTGCTGCACACTCA+AGG | + | chr7_2:64779547-64779566 | None:intergenic | 45.0% | |
| TGAGTGTGCAGCAAGAGAAA+AGG | - | chr7_2:64779547-64779566 | Msa1069270:intron | 45.0% | |
| AGCAAATGGGTGCAACAGTT+AGG | - | chr7_2:64779574-64779593 | Msa1069270:intron | 45.0% | |
| !! | ATATTTATATGATTAAAATT+TGG | + | chr7_2:64777461-64777480 | None:intergenic | 5.0% |
| !! | AAAAAATAATAAAAAAAAAG+AGG | + | chr7_2:64777934-64777953 | None:intergenic | 5.0% |
| TAGAACACGAGGGAGAATGC+CGG | + | chr7_2:64777626-64777645 | None:intergenic | 50.0% | |
| TCTTATAGTCGGCTATGGCG+CGG | - | chr7_2:64778012-64778031 | Msa1069270:intron | 50.0% | |
| CATAGTTCCACGTGTTTCCG+GGG | - | chr7_2:64778042-64778061 | Msa1069270:intron | 50.0% | |
| ! | CATAGAAGCACGCCATGGAT+TGG | + | chr7_2:64778094-64778113 | None:intergenic | 50.0% |
| ! | CTTCACATAGAAGCACGCCA+TGG | + | chr7_2:64778099-64778118 | None:intergenic | 50.0% |
| CATGGCGTGCTTCTATGTGA+AGG | - | chr7_2:64778097-64778116 | Msa1069270:intron | 50.0% | |
| GTGTCTTCCTCGTACCATGA+TGG | + | chr7_2:64778136-64778155 | None:intergenic | 50.0% | |
| CCATCAGGAGCAAAAGCCAT+TGG | + | chr7_2:64778568-64778587 | None:intergenic | 50.0% | |
| ! | CCAATGGCTTTTGCTCCTGA+TGG | - | chr7_2:64778565-64778584 | Msa1069270:intron | 50.0% |
| !! | TGATAAGCAAAGGGGCATCC+TGG | + | chr7_2:64778709-64778728 | None:intergenic | 50.0% |
| AGGATGCCCCTTTGCTTATC+AGG | - | chr7_2:64778708-64778727 | Msa1069270:CDS | 50.0% | |
| GACCTCTACAATCATGGCCT+TGG | - | chr7_2:64779115-64779134 | Msa1069270:CDS | 50.0% | |
| ! | AGAAGGGGCAGAGTTTCTAG+AGG | - | chr7_2:64779168-64779187 | Msa1069270:CDS | 50.0% |
| GGTGCAACAGTTAGGAATGC+AGG | - | chr7_2:64779582-64779601 | Msa1069270:intron | 50.0% | |
| GATGTGCTACACATGGGACA+TGG | - | chr7_2:64779843-64779862 | Msa1069270:five_prime_UTR | 50.0% | |
| ATATGGACCCCGGAAACACG+TGG | + | chr7_2:64778052-64778071 | None:intergenic | 55.0% | |
| CACGAGGGAGAATGCCGGAT+AGG | + | chr7_2:64777621-64777640 | None:intergenic | 60.0% | |
| AGTCGGCTATGGCGCGGTAC+CGG | - | chr7_2:64778018-64778037 | Msa1069270:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 64777357 | 64780042 | 64777357 | ID=Msa1069270;Name=Msa1069270 |
| chr7_2 | mRNA | 64777357 | 64780042 | 64777357 | ID=Msa1069270-mRNA-1;Parent=Msa1069270;Name=Msa1069270-mRNA-1;_AED=0.05;_eAED=0.05;_QI=250|1|1|1|0.75|0.6|5|236|424 |
| chr7_2 | exon | 64777357 | 64777430 | 64777357 | ID=Msa1069270-mRNA-1:exon:13504;Parent=Msa1069270-mRNA-1 |
| chr7_2 | exon | 64777452 | 64777865 | 64777452 | ID=Msa1069270-mRNA-1:exon:13503;Parent=Msa1069270-mRNA-1 |
| chr7_2 | exon | 64778210 | 64778410 | 64778210 | ID=Msa1069270-mRNA-1:exon:13502;Parent=Msa1069270-mRNA-1 |
| chr7_2 | exon | 64778670 | 64779403 | 64778670 | ID=Msa1069270-mRNA-1:exon:13501;Parent=Msa1069270-mRNA-1 |
| chr7_2 | exon | 64779705 | 64780042 | 64779705 | ID=Msa1069270-mRNA-1:exon:13500;Parent=Msa1069270-mRNA-1 |
| chr7_2 | five_prime_UTR | 64779793 | 64780042 | 64779793 | ID=Msa1069270-mRNA-1:five_prime_utr;Parent=Msa1069270-mRNA-1 |
| chr7_2 | CDS | 64779705 | 64779792 | 64779705 | ID=Msa1069270-mRNA-1:cds;Parent=Msa1069270-mRNA-1 |
| chr7_2 | CDS | 64778670 | 64779403 | 64778670 | ID=Msa1069270-mRNA-1:cds;Parent=Msa1069270-mRNA-1 |
| chr7_2 | CDS | 64778210 | 64778410 | 64778210 | ID=Msa1069270-mRNA-1:cds;Parent=Msa1069270-mRNA-1 |
| chr7_2 | CDS | 64777614 | 64777865 | 64777614 | ID=Msa1069270-mRNA-1:cds;Parent=Msa1069270-mRNA-1 |
| chr7_2 | three_prime_UTR | 64777452 | 64777613 | 64777452 | ID=Msa1069270-mRNA-1:three_prime_utr;Parent=Msa1069270-mRNA-1 |
| chr7_2 | three_prime_UTR | 64777357 | 64777430 | 64777357 | ID=Msa1069270-mRNA-1:three_prime_utr;Parent=Msa1069270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
