AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0693060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0693060 MtrunA17_Chr4g0043341 99.235 392 1 1 1 392 1 390 0.0 778
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0693060 AT1G30480.1 71.000 400 94 7 1 391 1 387 3.03e-173 489

Find 189 sgRNAs with CRISPR-Local

Find 502 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCGTCAGTGGGAAAATT+TGG 0.205950 4_4:-61884956 None:intergenic
CATAGATGTTCTGTTCTTCT+AGG 0.206516 4_4:-61885146 None:intergenic
ACCTTGATGGTCGATACTTT+GGG 0.229758 4_4:+61885035 Msa0693060:CDS
GATTCGAGATTGAATATTTC+CGG 0.238391 4_4:+61880502 Msa0693060:CDS
AAAGAGAAGAGGAGGGTTTA+CGG 0.245741 4_4:-61880123 None:intergenic
GTGCACGGTGTTTAAGATTA+AGG 0.267823 4_4:-61879965 None:intergenic
GGGTTGGGAGTTGGTGCTGG+TGG 0.281207 4_4:+61880655 Msa0693060:CDS
TAGAGATAGGGAGAGAGATC+AGG 0.283507 4_4:+61880477 Msa0693060:CDS
TCCAAGTGATCATAATATTA+AGG 0.298075 4_4:-61885390 None:intergenic
AAAGGGAGAGAGATAGAGAT+AGG 0.316661 4_4:+61880464 Msa0693060:CDS
AGGGCAAGGGCTTGGGAAAC+AGG 0.324519 4_4:+61880726 Msa0693060:CDS
GAAATGTTGGGTGGGTTATA+CGG 0.325122 4_4:+61880013 Msa0693060:exon
TTACATGATAGTTGAGCATT+TGG 0.335357 4_4:+61885233 Msa0693060:three_prime_UTR
AAAGCGCTTGTTGACCTTGA+TGG 0.335789 4_4:+61885022 Msa0693060:CDS
GGGATGAGTGGAGGAGGTGG+TGG 0.342619 4_4:+61880550 Msa0693060:CDS
TTACGCTGAAGACTTGAAAT+TGG 0.343434 4_4:+61885194 Msa0693060:three_prime_UTR
AGTGGAGGAGGTGGTGGCAG+TGG 0.346253 4_4:+61880556 Msa0693060:CDS
GCTGGAGAGACGGAGGGAGG+AGG 0.352148 4_4:+61880399 Msa0693060:CDS
TGGAAACAAGGGCAAGGGCT+TGG 0.353102 4_4:+61880718 Msa0693060:CDS
GTGTGGATGGATTTAGTATT+GGG 0.354043 4_4:+61880617 Msa0693060:CDS
AGGTGGTGGCAGTGGTGGAC+GGG 0.357365 4_4:+61880564 Msa0693060:CDS
GAGACGGAGGGAGGAGGAGG+AGG 0.361571 4_4:+61880405 Msa0693060:CDS
GTTGGGTTGGGAGTTGGTGC+TGG 0.362932 4_4:+61880652 Msa0693060:CDS
GGATCAGAATGTGCCAAGTA+TGG 0.369716 4_4:+61884896 Msa0693060:CDS
AAACACATTTAGACCAAGAT+TGG 0.370541 4_4:-61885261 None:intergenic
TCGGGTTACTGTTCCATACT+TGG 0.373407 4_4:-61884909 None:intergenic
GTGACTAAGGGTTGTTGCTT+AGG 0.376265 4_4:+61885290 Msa0693060:three_prime_UTR
CCATCTCAACCGGCTCTTGT+AGG 0.379713 4_4:+61880268 Msa0693060:CDS
GGTGGTTGGTTTATCTTCTT+CGG 0.381468 4_4:-61880059 None:intergenic
GGAAACAAGGGCAAGGGCTT+GGG 0.385410 4_4:+61880719 Msa0693060:CDS
AAGTCGGAGACGGTTGGGTT+GGG 0.388880 4_4:+61880640 Msa0693060:CDS
GAGACGGTTGGGTTGGGAGT+TGG 0.391170 4_4:+61880646 Msa0693060:CDS
TGCAGGAGAGAGAATAGTTT+TGG 0.395509 4_4:-61880203 None:intergenic
CGTCGGAGCTTCGAAATGTT+GGG 0.397633 4_4:+61880001 Msa0693060:exon
GGAGAGACGGAGGGAGGAGG+AGG 0.406799 4_4:+61880402 Msa0693060:CDS
AGAGGGAGAGAGAAAGAGAA+AGG 0.407620 4_4:+61880446 Msa0693060:CDS
GAGGGTTTACGGAGAGTGGC+GGG 0.412268 4_4:-61880112 None:intergenic
AGAGATAGGGAGAGAGATCA+GGG 0.413669 4_4:+61880478 Msa0693060:CDS
AGGAGGAGAGGGAGAAAGAG+AGG 0.415770 4_4:+61880422 Msa0693060:CDS
GACCTTGATGGTCGATACTT+TGG 0.416405 4_4:+61885034 Msa0693060:CDS
GGGTTTACGGAGAGTGGCGG+GGG 0.417810 4_4:-61880110 None:intergenic
GGTTGGGAGTTGGTGCTGGT+GGG 0.423146 4_4:+61880656 Msa0693060:CDS
TGTGTTTGTAACAGTGACTA+AGG 0.423184 4_4:+61885277 Msa0693060:three_prime_UTR
GCATTTGGTTAAGCCAATCT+TGG 0.426112 4_4:+61885248 Msa0693060:three_prime_UTR
AGAGGGAGAAAGAGAGGGAG+AGG 0.428031 4_4:+61880428 Msa0693060:CDS
GAGGTGGTGGCAGTGGTGGA+CGG 0.428340 4_4:+61880563 Msa0693060:CDS
GGAGGAGGTGGTGGCAGTGG+TGG 0.430765 4_4:+61880559 Msa0693060:CDS
CCGAGGTCGCCATCGCCTCC+CGG 0.432302 4_4:+61880592 Msa0693060:CDS
CTGGTCATCCAGCACCAAAA+TGG 0.435428 4_4:+61880087 Msa0693060:CDS
GTGGGGATGAGTGGAGGAGG+TGG 0.437454 4_4:+61880547 Msa0693060:CDS
AGGGTTTACGGAGAGTGGCG+GGG 0.445201 4_4:-61880111 None:intergenic
GCGTCGGAGCTTCGAAATGT+TGG 0.445615 4_4:+61880000 Msa0693060:exon
GCAAGAATCGGCTGTGGTGC+AGG 0.448000 4_4:-61880220 None:intergenic
GAGGGAGAGAGAAAGAGAAA+GGG 0.448011 4_4:+61880447 Msa0693060:CDS
GGAGGGTTTACGGAGAGTGG+CGG 0.449146 4_4:-61880113 None:intergenic
GAGGGAGAAAGAGAGGGAGA+GGG 0.449585 4_4:+61880429 Msa0693060:CDS
TCGCCTCCCGGGAGTGTGGA+TGG 0.452371 4_4:+61880604 Msa0693060:CDS
GGTGGTGGCAGTGGTGGACG+GGG 0.454602 4_4:+61880565 Msa0693060:CDS
TTTGGGATCGAAGAAGGGTA+TGG 0.455058 4_4:-61880156 None:intergenic
CTTATCAGACTTACTGTCAC+TGG 0.458476 4_4:-61880815 None:intergenic
TCAGAGGATGATGGCAAAGA+TGG 0.461946 4_4:+61880693 Msa0693060:CDS
GAAGTCGGAGACGGTTGGGT+TGG 0.461972 4_4:+61880639 Msa0693060:CDS
TTGGGATCGAAGAAGGGTAT+GGG 0.461993 4_4:-61880155 None:intergenic
CGATACTCTTCATAATCATT+CGG 0.462326 4_4:-61880331 None:intergenic
AGGGATTACAACTCCGTTGA+TGG 0.463810 4_4:+61880753 Msa0693060:CDS
AGTGGCGACAGCTTATTTGA+TGG 0.465959 4_4:-61885423 None:intergenic
GGAGGAGAGGGAGAAAGAGA+GGG 0.470610 4_4:+61880423 Msa0693060:CDS
CCAGGAATTTCTCCTGGCAT+TGG 0.472680 4_4:-61885118 None:intergenic
AAGGGAGAGAGATAGAGATA+GGG 0.473212 4_4:+61880465 Msa0693060:CDS
AGTGTGGATGGATTTAGTAT+TGG 0.474626 4_4:+61880616 Msa0693060:CDS
TTGGGAAGTCGGAGACGGTT+GGG 0.475282 4_4:+61880635 Msa0693060:CDS
TTATCTTCTTCGGCGGAAGA+AGG 0.476621 4_4:-61880049 None:intergenic
GTTAAGAGTGTTAACATCAA+TGG 0.478275 4_4:+61880841 Msa0693060:CDS
TCATAATCATTCGGCCTCGC+CGG 0.479312 4_4:-61880322 None:intergenic
AGGCGTGTGGGGATGAGTGG+AGG 0.481563 4_4:+61880541 Msa0693060:CDS
AGATGATGAGCTGGAAGATG+AGG 0.483402 4_4:+61884871 Msa0693060:CDS
AGCGGAGATGATGAGGGAGC+TGG 0.486726 4_4:+61880381 Msa0693060:CDS
TGTTGTTCAACCATCTCAAC+CGG 0.489564 4_4:+61880258 Msa0693060:CDS
CCAATGCCAGGAGAAATTCC+TGG 0.492382 4_4:+61885118 Msa0693060:CDS
GCAAAGATGGGGTGGAAACA+AGG 0.492416 4_4:+61880706 Msa0693060:CDS
TGGCGACATTAGTGCAAGTA+AGG 0.493991 4_4:-61885342 None:intergenic
AGTATCGGAGGGAGAAGAAG+AGG 0.498642 4_4:+61880347 Msa0693060:CDS
TCCTTAATATTATGATCACT+TGG 0.499494 4_4:+61885389 Msa0693060:three_prime_UTR
AAGAAAACCGATAGACGGGC+TGG 0.499615 4_4:+61880778 Msa0693060:CDS
CTGTTCTTCTAGGTGAAGCC+AGG 0.500844 4_4:-61885136 None:intergenic
TGGATTTAGTATTGGGAAGT+CGG 0.501213 4_4:+61880624 Msa0693060:CDS
ACTAAATCCATCCACACTCC+CGG 0.501604 4_4:-61880611 None:intergenic
CGAGGTCGCCATCGCCTCCC+GGG 0.503095 4_4:+61880593 Msa0693060:CDS
AGAAGGCGTGTGGGGATGAG+TGG 0.504360 4_4:+61880538 Msa0693060:CDS
CGTGTGGGGATGAGTGGAGG+AGG 0.505316 4_4:+61880544 Msa0693060:CDS
AAACCTCTCCTCGACGAAGA+AGG 0.507996 4_4:+61879856 Msa0693060:five_prime_UTR
AGGTGTGTAAAGAGAAGAGG+AGG 0.508512 4_4:-61880131 None:intergenic
TCCACACTCCCGGGAGGCGA+TGG 0.508661 4_4:-61880601 None:intergenic
ATAAACCAACCACCAATGTC+TGG 0.508799 4_4:+61880068 Msa0693060:CDS
ATTCTTACTGCTTCGTCAGT+GGG 0.509933 4_4:-61884965 None:intergenic
CCTTGATGGTCGATACTTTG+GGG 0.511583 4_4:+61885036 Msa0693060:CDS
AACCTCTCCTCGACGAAGAA+GGG 0.517009 4_4:+61879857 Msa0693060:five_prime_UTR
GGGAGGTGTGTAAAGAGAAG+AGG 0.523982 4_4:-61880134 None:intergenic
TTCCCTTCTTCGTCGAGGAG+AGG 0.525736 4_4:-61879859 None:intergenic
ACACTATTTCCTACCGCTAT+CGG 0.528221 4_4:-61879909 None:intergenic
GGCGAAGAAAACCGATAGAC+GGG 0.530747 4_4:+61880774 Msa0693060:CDS
AGAAAACCGATAGACGGGCT+GGG 0.532383 4_4:+61880779 Msa0693060:CDS
ACTTGATCTTAAACTAGTTG+AGG 0.535933 4_4:+61885443 Msa0693060:three_prime_UTR
ATTGGGAAGTCGGAGACGGT+TGG 0.535983 4_4:+61880634 Msa0693060:CDS
CCTTCTCCATGCTTCCTCAC+CGG 0.541141 4_4:-61880521 None:intergenic
CCTACAAGAGCCGGTTGAGA+TGG 0.541220 4_4:-61880268 None:intergenic
CAGAGGATGATGGCAAAGAT+GGG 0.541874 4_4:+61880694 Msa0693060:CDS
CTAGAGAAGCGGAGATGATG+AGG 0.544920 4_4:+61880374 Msa0693060:CDS
GGAGCTGGAGAGACGGAGGG+AGG 0.547480 4_4:+61880396 Msa0693060:CDS
TCGAGTGGCGAAGCAAGAAT+CGG 0.548486 4_4:-61880232 None:intergenic
CTAAATCCATCCACACTCCC+GGG 0.550046 4_4:-61880610 None:intergenic
AGAGGAGGGTTTACGGAGAG+TGG 0.550048 4_4:-61880116 None:intergenic
ATATTTCCGGTGAGGAAGCA+TGG 0.550675 4_4:+61880515 Msa0693060:CDS
CCGGGAGGCGATGGCGACCT+CGG 0.552926 4_4:-61880592 None:intergenic
GTGAAGCCAGGAATTTCTCC+TGG 0.553408 4_4:-61885124 None:intergenic
AATGAGTTAGCTCCAATGCC+AGG 0.554584 4_4:+61885106 Msa0693060:CDS
AGCTCATCATCTACCTCACC+AGG 0.554865 4_4:-61884860 None:intergenic
AGGAGTACAGTCGACGGTGA+TGG 0.554947 4_4:+61880288 Msa0693060:CDS
TTATCTCAAATATCAGAACT+CGG 0.555140 4_4:-61884928 None:intergenic
CGGAGCTTCGAAATGTTGGG+TGG 0.555447 4_4:+61880004 Msa0693060:exon
CGAATGATTATGAAGAGTAT+CGG 0.556395 4_4:+61880332 Msa0693060:CDS
GTTTCTAAGTAGCAGTACTC+TGG 0.558301 4_4:-61880872 None:intergenic
GCACGTTTCTGTGTTTGCGT+CGG 0.562456 4_4:+61879984 Msa0693060:five_prime_UTR
GACTGCTGCTCAGAGGATGA+TGG 0.563308 4_4:+61880684 Msa0693060:CDS
TGATGAGGGAGCTGGAGAGA+CGG 0.563970 4_4:+61880389 Msa0693060:CDS
TCTTCTTCGGCGGAAGAAGG+TGG 0.565773 4_4:-61880046 None:intergenic
GCCATCGCCTCCCGGGAGTG+TGG 0.566180 4_4:+61880600 Msa0693060:CDS
GAAAACCGATAGACGGGCTG+GGG 0.568144 4_4:+61880780 Msa0693060:CDS
GGGCTTGGGAAACAGGAGCA+AGG 0.568284 4_4:+61880733 Msa0693060:CDS
TTTGAAGGTGGGGCCTGGTG+AGG 0.568793 4_4:+61884847 Msa0693060:intron
TGGGATCGAAGAAGGGTATG+GGG 0.568994 4_4:-61880154 None:intergenic
CCGGTGAGGAAGCATGGAGA+AGG 0.570595 4_4:+61880521 Msa0693060:CDS
GACTGTACTCCTACAAGAGC+CGG 0.571332 4_4:-61880277 None:intergenic
GATGACCAGACATTGGTGGT+TGG 0.571359 4_4:-61880073 None:intergenic
GATTCTTACTGCTTCGTCAG+TGG 0.572897 4_4:-61884966 None:intergenic
TGGTGAGGTAGATGATGAGC+TGG 0.574351 4_4:+61884862 Msa0693060:CDS
GTGGTGGACGGGGTGTGCCG+AGG 0.576445 4_4:+61880575 Msa0693060:CDS
GGCTTGGGAAACAGGAGCAA+GGG 0.578046 4_4:+61880734 Msa0693060:CDS
TCAACTAGTTTAAGATCAAG+TGG 0.580150 4_4:-61885441 None:intergenic
AATAACCCCAGCCCGTCTAT+CGG 0.581849 4_4:-61880785 None:intergenic
GAAGAGGAAGGCTAGAGAAG+CGG 0.582413 4_4:+61880363 Msa0693060:CDS
CAAAGATGGGGTGGAAACAA+GGG 0.583228 4_4:+61880707 Msa0693060:CDS
GGTGCTGGATGACCAGACAT+TGG 0.585477 4_4:-61880080 None:intergenic
TAGTATTGGGAAGTCGGAGA+CGG 0.588760 4_4:+61880630 Msa0693060:CDS
GAGGGAGCTGGAGAGACGGA+GGG 0.591156 4_4:+61880393 Msa0693060:CDS
CGGCGGAAGAAGGTGGAGGT+AGG 0.591410 4_4:-61880039 None:intergenic
GAAGCATGGAGAAGGCGTGT+GGG 0.595489 4_4:+61880529 Msa0693060:CDS
TGAGGGAGCTGGAGAGACGG+AGG 0.596141 4_4:+61880392 Msa0693060:CDS
CTTGTCCTCGTCGTAAAATG+TGG 0.599106 4_4:-61885074 None:intergenic
GGAAGCATGGAGAAGGCGTG+TGG 0.600681 4_4:+61880528 Msa0693060:CDS
GGATGATGGCAAAGATGGGG+TGG 0.606439 4_4:+61880698 Msa0693060:CDS
CTAAGTAGCAGTACTCTGGT+AGG 0.610209 4_4:-61880868 None:intergenic
CCCCAAAGTATCGACCATCA+AGG 0.612071 4_4:-61885036 None:intergenic
TATCTCAAATATCAGAACTC+GGG 0.612442 4_4:-61884927 None:intergenic
ATGGGGTGGAAACAAGGGCA+AGG 0.615661 4_4:+61880712 Msa0693060:CDS
GGTGATGGAGGAGTACGATC+CGG 0.617347 4_4:+61880303 Msa0693060:CDS
TGATTATGAAGAGTATCGGA+GGG 0.618046 4_4:+61880336 Msa0693060:CDS
TGGCGAAGAAAACCGATAGA+CGG 0.618277 4_4:+61880773 Msa0693060:CDS
ATGATTATGAAGAGTATCGG+AGG 0.619320 4_4:+61880335 Msa0693060:CDS
GCTGGATGACCAGACATTGG+TGG 0.620237 4_4:-61880077 None:intergenic
TAGAGAAGCGGAGATGATGA+GGG 0.620276 4_4:+61880375 Msa0693060:CDS
GGCGAAGCAAGAATCGGCTG+TGG 0.620433 4_4:-61880226 None:intergenic
GGAGCTTCGAAATGTTGGGT+GGG 0.623106 4_4:+61880005 Msa0693060:exon
TCGATTTCCCTTCTTCGTCG+AGG 0.629153 4_4:-61879864 None:intergenic
AGTACAGTCGACGGTGATGG+AGG 0.633085 4_4:+61880291 Msa0693060:CDS
TCGGAGGGAGAAGAAGAGGA+AGG 0.634469 4_4:+61880351 Msa0693060:CDS
TCTTCGGCGGAAGAAGGTGG+AGG 0.634823 4_4:-61880043 None:intergenic
AAGCATGGAGAAGGCGTGTG+GGG 0.635401 4_4:+61880530 Msa0693060:CDS
GATGAGCTGGAAGATGAGGT+AGG 0.638199 4_4:+61884875 Msa0693060:CDS
CGCAAACACAGAAACGTGCA+CGG 0.639413 4_4:-61879980 None:intergenic
GGCAGATGACTGCTGCTCAG+AGG 0.641609 4_4:+61880677 Msa0693060:CDS
AAGGATTTGATTTATTACGA+CGG 0.646175 4_4:-61879946 None:intergenic
GGTTGGTTTATCTTCTTCGG+CGG 0.647196 4_4:-61880056 None:intergenic
TGGGGTGGAAACAAGGGCAA+GGG 0.650980 4_4:+61880713 Msa0693060:CDS
CAGTAGGTACCGATAGCGGT+AGG 0.651574 4_4:+61879900 Msa0693060:five_prime_UTR
GGTGTGTAAAGAGAAGAGGA+GGG 0.655832 4_4:-61880130 None:intergenic
GAGATTGAATATTTCCGGTG+AGG 0.659798 4_4:+61880507 Msa0693060:CDS
CTTGATGGTCGATACTTTGG+GGG 0.673875 4_4:+61885037 Msa0693060:CDS
AGAGGATGATGGCAAAGATG+GGG 0.674521 4_4:+61880695 Msa0693060:CDS
AGTACTGCTACTTAGAAACA+TGG 0.680250 4_4:+61880876 Msa0693060:CDS
GTGTTTGTAACAGTGACTAA+GGG 0.683417 4_4:+61885278 Msa0693060:three_prime_UTR
GGTTGAACAACATCGTCGAG+TGG 0.685085 4_4:-61880247 None:intergenic
CGACCGTCGAGAAAATCAGT+AGG 0.685574 4_4:+61879884 Msa0693060:five_prime_UTR
AAATCAGTAGGTACCGATAG+CGG 0.685777 4_4:+61879896 Msa0693060:five_prime_UTR
GATCGAAGAAGGGTATGGGG+AGG 0.698654 4_4:-61880151 None:intergenic
TGGAGGAGTACGATCCGGCG+AGG 0.720137 4_4:+61880308 Msa0693060:CDS
TCAAGTTCAACAATGTACAG+TGG 0.731687 4_4:-61885362 None:intergenic
AATCCATCCACACTCCCGGG+AGG 0.744351 4_4:-61880607 None:intergenic
TCTTGTAGGAGTACAGTCGA+CGG 0.763092 4_4:+61880282 Msa0693060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATGTTTATAATTATTAATA+TGG + chr4_4:61883676-61883695 Msa0693060:intron 10.0%
!!! AATAAATTAAACATCATTTT+AGG - chr4_4:61884797-61884816 None:intergenic 10.0%
!! TATATATTAGATTAGAAGAA+AGG + chr4_4:61881408-61881427 Msa0693060:intron 15.0%
!! TCTCAATAAATTTAAAGAAT+TGG + chr4_4:61883222-61883241 Msa0693060:intron 15.0%
!! TTTAATGTTAAATGCTTGTT+TGG + chr4_4:61880909-61880928 Msa0693060:intron 20.0%
!!! TTTTAATTTGAAAATAGCAC+AGG + chr4_4:61881099-61881118 Msa0693060:intron 20.0%
!! TTATTATGGAAAGAATTCAA+TGG - chr4_4:61882472-61882491 None:intergenic 20.0%
!!! AAAGTATTTGGTAGAAATTA+CGG - chr4_4:61882732-61882751 None:intergenic 20.0%
!!! ATTTTATGGTTTAGTTTAGA+AGG + chr4_4:61883328-61883347 Msa0693060:intron 20.0%
!! TTCAATGCCAATAAAAATAA+TGG - chr4_4:61883417-61883436 None:intergenic 20.0%
!!! ATTTTTATTGGCATTGAAAT+TGG + chr4_4:61883419-61883438 Msa0693060:intron 20.0%
!!! AATTTTCTGATTATATGACT+TGG + chr4_4:61883552-61883571 Msa0693060:intron 20.0%
!!! TATTTCTTACTATGGAATTT+TGG + chr4_4:61883777-61883796 Msa0693060:intron 20.0%
!! AAAGAACTGTAATTCTTAAA+AGG - chr4_4:61883842-61883861 None:intergenic 20.0%
!!! TTCCTTTCATAATATTTTGA+AGG + chr4_4:61884013-61884032 Msa0693060:intron 20.0%
!! GAAAGAATGAAAAAGAATTT+CGG - chr4_4:61884072-61884091 None:intergenic 20.0%
!!! GAAATTCTTTTTCATTCTTT+CGG + chr4_4:61884071-61884090 Msa0693060:intron 20.0%
!! TATTTCTTTCTTTCTTTCTT+AGG - chr4_4:61884390-61884409 None:intergenic 20.0%
!! ATGACAAAAGATTAACAATA+AGG - chr4_4:61884743-61884762 None:intergenic 20.0%
!! AAGGATTTGATTTATTACGA+CGG - chr4_4:61879949-61879968 None:intergenic 25.0%
!!! GACAATTTTAGGTTTGTTTT+GGG - chr4_4:61880176-61880195 None:intergenic 25.0%
!!! TGACAATTTTAGGTTTGTTT+TGG - chr4_4:61880177-61880196 None:intergenic 25.0%
! TTCTAACTCATAAAACAGAA+TGG - chr4_4:61881305-61881324 None:intergenic 25.0%
! ATATTAGATTAGAAGAAAGG+AGG + chr4_4:61881411-61881430 Msa0693060:intron 25.0%
! TAAATGTCCATGATAAATAC+TGG + chr4_4:61882010-61882029 Msa0693060:intron 25.0%
! TATAGAAACGTTGAAAGAAA+AGG + chr4_4:61882042-61882061 Msa0693060:intron 25.0%
!!! TTTTAGAAGGAAAGATTTCA+GGG - chr4_4:61882117-61882136 None:intergenic 25.0%
!!! TTTTATGTTTTGTTGGAGAT+TGG - chr4_4:61882140-61882159 None:intergenic 25.0%
! AAAATTGGTTGGAGATTTAT+AGG - chr4_4:61882633-61882652 None:intergenic 25.0%
!! AATCTCCAACCAATTTTTAA+AGG + chr4_4:61882636-61882655 Msa0693060:intron 25.0%
!! ATCTCCAACCAATTTTTAAA+GGG + chr4_4:61882637-61882656 Msa0693060:intron 25.0%
!! TAGACCTTTCAAGAAAATTT+TGG + chr4_4:61882790-61882809 Msa0693060:intron 25.0%
! ATGTTACAAAGCAATTATGT+TGG - chr4_4:61883031-61883050 None:intergenic 25.0%
!! TACACAGACACATAATTTTA+TGG + chr4_4:61883314-61883333 Msa0693060:intron 25.0%
!!! ATGCTTGTTTGTTATGAAAA+TGG - chr4_4:61883376-61883395 None:intergenic 25.0%
!!! ACACGTTCCATTATTTTTAT+TGG + chr4_4:61883407-61883426 Msa0693060:intron 25.0%
! TATGATGTTAATACAGTATG+AGG + chr4_4:61883649-61883668 Msa0693060:intron 25.0%
! ATGATGTTAATACAGTATGA+GGG + chr4_4:61883650-61883669 Msa0693060:intron 25.0%
! AATATGGTGTAGTTGTAAAT+CGG + chr4_4:61883692-61883711 Msa0693060:intron 25.0%
!! TTACTATGGAATTTTGGATT+AGG + chr4_4:61883783-61883802 Msa0693060:intron 25.0%
!! CATGGTATATTTTCTTTCTT+GGG + chr4_4:61883874-61883893 Msa0693060:intron 25.0%
!! ATGGTATATTTTCTTTCTTG+GGG + chr4_4:61883875-61883894 Msa0693060:intron 25.0%
! TCAATGAAAATAAGCTCATT+TGG - chr4_4:61883972-61883991 None:intergenic 25.0%
! CTCCTTCAAAATATTATGAA+AGG - chr4_4:61884018-61884037 None:intergenic 25.0%
! TTCATTCTTTCGGTAATTTA+TGG + chr4_4:61884081-61884100 Msa0693060:intron 25.0%
! TCATTCTTTCGGTAATTTAT+GGG + chr4_4:61884082-61884101 Msa0693060:intron 25.0%
! GCATTAATAATATGCAAATG+AGG - chr4_4:61884243-61884262 None:intergenic 25.0%
! TTTGCATATTATTAATGCTG+AGG + chr4_4:61884245-61884264 Msa0693060:intron 25.0%
! TTAAATCTGATCTATTGCTT+TGG - chr4_4:61884284-61884303 None:intergenic 25.0%
!! GAAGAAATTTTCTTAGAAAG+AGG + chr4_4:61884344-61884363 Msa0693060:intron 25.0%
!! AAATTTTCTTAGAAAGAGGA+TGG + chr4_4:61884348-61884367 Msa0693060:intron 25.0%
!! AATTTTCTTAGAAAGAGGAT+GGG + chr4_4:61884349-61884368 Msa0693060:intron 25.0%
!!! TTATTGTTGCTTTGTTTTGA+AGG + chr4_4:61884832-61884851 Msa0693060:intron 25.0%
! TTATCTCAAATATCAGAACT+CGG - chr4_4:61884931-61884950 None:intergenic 25.0%
! TCCTTAATATTATGATCACT+TGG + chr4_4:61885389-61885408 Msa0693060:three_prime_UTR 25.0%
! TCCAAGTGATCATAATATTA+AGG - chr4_4:61885393-61885412 None:intergenic 25.0%
! TTGGTGGAATTGACAATTTT+AGG - chr4_4:61880187-61880206 None:intergenic 30.0%
CGATACTCTTCATAATCATT+CGG - chr4_4:61880334-61880353 None:intergenic 30.0%
! CGAATGATTATGAAGAGTAT+CGG + chr4_4:61880332-61880351 Msa0693060:CDS 30.0%
GATTCGAGATTGAATATTTC+CGG + chr4_4:61880502-61880521 Msa0693060:CDS 30.0%
!! GTTAAGAGTGTTAACATCAA+TGG + chr4_4:61880841-61880860 Msa0693060:CDS 30.0%
! GTTAAATGCTTGTTTGGTTT+CGG + chr4_4:61880915-61880934 Msa0693060:intron 30.0%
TGAATATTTGGCATATGATG+TGG + chr4_4:61881126-61881145 Msa0693060:intron 30.0%
ATAATCGATATGACTACATC+CGG - chr4_4:61881179-61881198 None:intergenic 30.0%
!! AACACATCACACTTTTTACT+AGG + chr4_4:61881264-61881283 Msa0693060:intron 30.0%
TATATTCAGAAACACAGTGA+AGG - chr4_4:61881366-61881385 None:intergenic 30.0%
AAACAATGTCTAACTAACAG+AGG - chr4_4:61881451-61881470 None:intergenic 30.0%
CTACCTTTACTATTGTGTTA+GGG - chr4_4:61881527-61881546 None:intergenic 30.0%
ACTACCTTTACTATTGTGTT+AGG - chr4_4:61881528-61881547 None:intergenic 30.0%
AAAGGTAGTAGTATACAAAG+AGG + chr4_4:61881539-61881558 Msa0693060:intron 30.0%
AAGGTAGTAGTATACAAAGA+GGG + chr4_4:61881540-61881559 Msa0693060:intron 30.0%
!! TTAGTTGGTCAGTTTGTTTT+TGG + chr4_4:61881584-61881603 Msa0693060:intron 30.0%
ATAAACGTTCTTAATCACAC+AGG + chr4_4:61881634-61881653 Msa0693060:intron 30.0%
TAAACGTTCTTAATCACACA+GGG + chr4_4:61881635-61881654 Msa0693060:intron 30.0%
ATGTTGTATGAACAAATGCT+AGG + chr4_4:61881819-61881838 Msa0693060:intron 30.0%
AGTTGTAGTAACAAATGTCA+AGG + chr4_4:61881980-61881999 Msa0693060:intron 30.0%
TTCAACGTTTCTATATTCTC+TGG - chr4_4:61882037-61882056 None:intergenic 30.0%
!!! GTTTTAGAAGGAAAGATTTC+AGG - chr4_4:61882118-61882137 None:intergenic 30.0%
!! TTTGGGGTTTTATGTTTTGT+TGG - chr4_4:61882147-61882166 None:intergenic 30.0%
AAAATTCCACGTGATATTGA+TGG - chr4_4:61882383-61882402 None:intergenic 30.0%
! TTTTTCATTCTTGCAAACAC+AGG + chr4_4:61882400-61882419 Msa0693060:intron 30.0%
AAAGAATTCAATGGAGATTC+AGG - chr4_4:61882463-61882482 None:intergenic 30.0%
TTCTTTCCATAATAACTAGC+CGG + chr4_4:61882477-61882496 Msa0693060:intron 30.0%
AGATATTTGTGAGAAGAACA+AGG - chr4_4:61882700-61882719 None:intergenic 30.0%
TTGTTCTTCTCACAAATATC+TGG + chr4_4:61882699-61882718 Msa0693060:intron 30.0%
ATTTCTACCAAATACTTTGC+TGG + chr4_4:61882734-61882753 Msa0693060:intron 30.0%
TTTCTACCAAATACTTTGCT+GGG + chr4_4:61882735-61882754 Msa0693060:intron 30.0%
! ACCTTTCAAGAAAATTTTGG+TGG + chr4_4:61882793-61882812 Msa0693060:intron 30.0%
! ACCACCAAAATTTTCTTGAA+AGG - chr4_4:61882797-61882816 None:intergenic 30.0%
TCATGTAACGAAACTTGTAA+GGG - chr4_4:61883190-61883209 None:intergenic 30.0%
ATCATGTAACGAAACTTGTA+AGG - chr4_4:61883191-61883210 None:intergenic 30.0%
TTAAAGAATTGGCCACTTAT+AGG + chr4_4:61883233-61883252 Msa0693060:intron 30.0%
! TATGGTTTAGTTTAGAAGGA+AGG + chr4_4:61883332-61883351 Msa0693060:intron 30.0%
! ATGGTTTAGTTTAGAAGGAA+GGG + chr4_4:61883333-61883352 Msa0693060:intron 30.0%
! TATATGACTTGGATGTATCT+TGG + chr4_4:61883563-61883582 Msa0693060:intron 30.0%
TGATGTTAATACAGTATGAG+GGG + chr4_4:61883651-61883670 Msa0693060:intron 30.0%
ATATGGTGTAGTTGTAAATC+GGG + chr4_4:61883693-61883712 Msa0693060:intron 30.0%
!! TGTGGCTTTATTTCTTACTA+TGG + chr4_4:61883769-61883788 Msa0693060:intron 30.0%
!! TTCTTTGAGTTGAATATCCA+TGG + chr4_4:61883856-61883875 Msa0693060:intron 30.0%
CCAAGAAAGAAAATATACCA+TGG - chr4_4:61883876-61883895 None:intergenic 30.0%
! CCATGGTATATTTTCTTTCT+TGG + chr4_4:61883873-61883892 Msa0693060:intron 30.0%
! TGGTATATTTTCTTTCTTGG+GGG + chr4_4:61883876-61883895 Msa0693060:intron 30.0%
! AAAATAAGCTCATTTGGCTT+TGG - chr4_4:61883966-61883985 None:intergenic 30.0%
CATTCTTTCGGTAATTTATG+GGG + chr4_4:61884083-61884102 Msa0693060:intron 30.0%
TCAACCAATAATTACAATGC+AGG - chr4_4:61884131-61884150 None:intergenic 30.0%
! TTTTAAACTGTTTAGGCACT+GGG + chr4_4:61884187-61884206 Msa0693060:intron 30.0%
AGTTGATCAATGTCAAACAA+AGG - chr4_4:61884324-61884343 None:intergenic 30.0%
! ATTTTCTTAGAAAGAGGATG+GGG + chr4_4:61884350-61884369 Msa0693060:intron 30.0%
!!! TCTGTTTTAGGTTTTTGTCA+GGG - chr4_4:61884434-61884453 None:intergenic 30.0%
!!! TTCTGTTTTAGGTTTTTGTC+AGG - chr4_4:61884435-61884454 None:intergenic 30.0%
! AACATTCCAATTTTCACGAT+TGG - chr4_4:61884490-61884509 None:intergenic 30.0%
!!! TCTAGTCAATTTTGACTTCT+TGG + chr4_4:61884537-61884556 Msa0693060:intron 30.0%
TGTACTAAATCAAGTTCATC+TGG - chr4_4:61884689-61884708 None:intergenic 30.0%
TATCTCAAATATCAGAACTC+GGG - chr4_4:61884930-61884949 None:intergenic 30.0%
! GAACATCTATGATTTTCATC+AGG + chr4_4:61885158-61885177 Msa0693060:three_prime_UTR 30.0%
TTACATGATAGTTGAGCATT+TGG + chr4_4:61885233-61885252 Msa0693060:three_prime_UTR 30.0%
AAACACATTTAGACCAAGAT+TGG - chr4_4:61885264-61885283 None:intergenic 30.0%
! TCAACTAGTTTAAGATCAAG+TGG - chr4_4:61885444-61885463 None:intergenic 30.0%
ACTTGATCTTAAACTAGTTG+AGG + chr4_4:61885443-61885462 Msa0693060:three_prime_UTR 30.0%
!!! TTTGTTTTGGGATCGAAGAA+GGG - chr4_4:61880164-61880183 None:intergenic 35.0%
!! ATGATTATGAAGAGTATCGG+AGG + chr4_4:61880335-61880354 Msa0693060:CDS 35.0%
!! TGATTATGAAGAGTATCGGA+GGG + chr4_4:61880336-61880355 Msa0693060:CDS 35.0%
! AGTGTGGATGGATTTAGTAT+TGG + chr4_4:61880616-61880635 Msa0693060:CDS 35.0%
! GTGTGGATGGATTTAGTATT+GGG + chr4_4:61880617-61880636 Msa0693060:CDS 35.0%
! TGGATTTAGTATTGGGAAGT+CGG + chr4_4:61880624-61880643 Msa0693060:CDS 35.0%
! AGTACTGCTACTTAGAAACA+TGG + chr4_4:61880876-61880895 Msa0693060:CDS 35.0%
!!! TTTCAGCTGCATTGTTTTGA+TGG + chr4_4:61881007-61881026 Msa0693060:intron 35.0%
!!! TTCAGCTGCATTGTTTTGAT+GGG + chr4_4:61881008-61881027 Msa0693060:intron 35.0%
AGCACAGGCTAATGAATATT+TGG + chr4_4:61881114-61881133 Msa0693060:intron 35.0%
CTTTACTATTGTGTTAGGGA+AGG - chr4_4:61881523-61881542 None:intergenic 35.0%
CTTCCCTAACACAATAGTAA+AGG + chr4_4:61881521-61881540 Msa0693060:intron 35.0%
AGGTAGTAGTATACAAAGAG+GGG + chr4_4:61881541-61881560 Msa0693060:intron 35.0%
TGTAATTGAGGGATGTTAGT+TGG + chr4_4:61881569-61881588 Msa0693060:intron 35.0%
AACAGCTTCCAAATTAAGTG+TGG - chr4_4:61881695-61881714 None:intergenic 35.0%
TGAGATTACTGTGTTCTTTC+TGG - chr4_4:61881750-61881769 None:intergenic 35.0%
AAGAACACAGTAATCTCATG+TGG + chr4_4:61881752-61881771 Msa0693060:intron 35.0%
TCTCATGTGGAATATCTTTC+TGG + chr4_4:61881765-61881784 Msa0693060:intron 35.0%
GAAACGTTGAAAGAAAAGGT+TGG + chr4_4:61882046-61882065 Msa0693060:intron 35.0%
TACATTCAGTTGTTCCTTTC+AGG + chr4_4:61882082-61882101 Msa0693060:intron 35.0%
!!! TGTTGGAGATTGGTTTTAGA+AGG - chr4_4:61882130-61882149 None:intergenic 35.0%
ATTGATGGAGGAATATTCGA+GGG - chr4_4:61882368-61882387 None:intergenic 35.0%
TATTGATGGAGGAATATTCG+AGG - chr4_4:61882369-61882388 None:intergenic 35.0%
ATACATTCCTTACCTTTGTC+AGG + chr4_4:61882584-61882603 Msa0693060:intron 35.0%
! AGGTTTAGGTTTCCACTAAT+GGG - chr4_4:61882613-61882632 None:intergenic 35.0%
! TAGGTTTAGGTTTCCACTAA+TGG - chr4_4:61882614-61882633 None:intergenic 35.0%
GGTTGGAGATTTATAGGTTT+AGG - chr4_4:61882627-61882646 None:intergenic 35.0%
! AAGGCCCTTTAAAAATTGGT+TGG - chr4_4:61882644-61882663 None:intergenic 35.0%
! GAGTAAGGCCCTTTAAAAAT+TGG - chr4_4:61882648-61882667 None:intergenic 35.0%
TCTTGCAAATGTAACGAGTA+AGG - chr4_4:61882663-61882682 None:intergenic 35.0%
TTACTCGTTACATTTGCAAG+AGG + chr4_4:61882662-61882681 Msa0693060:intron 35.0%
CTTGAAACAAGTGATTCTTG+TGG - chr4_4:61882863-61882882 None:intergenic 35.0%
AATCCCTGTGAATTACTCTT+GGG - chr4_4:61882886-61882905 None:intergenic 35.0%
GAAATCAGAATCCCTCATAT+GGG - chr4_4:61882957-61882976 None:intergenic 35.0%
AGAAATCAGAATCCCTCATA+TGG - chr4_4:61882958-61882977 None:intergenic 35.0%
!!! TTTGTGCTTGTTTTTGTGGT+GGG - chr4_4:61882993-61883012 None:intergenic 35.0%
CAAGTTTCGTTACATGATTG+AGG + chr4_4:61883193-61883212 Msa0693060:intron 35.0%
AAACATCACGACTATTGACA+TGG + chr4_4:61883256-61883275 Msa0693060:intron 35.0%
AACAAACAAGCATGCATCTA+TGG + chr4_4:61883383-61883402 Msa0693060:intron 35.0%
!!! CTCATTGTCTTTTCAAGTGT+TGG + chr4_4:61883489-61883508 Msa0693060:intron 35.0%
TCAATGTCCTGTTCTTAGAA+TGG + chr4_4:61883626-61883645 Msa0693060:intron 35.0%
! CATCATACCATTCTAAGAAC+AGG - chr4_4:61883636-61883655 None:intergenic 35.0%
CTAGGATTCATTAGCAGATT+GGG + chr4_4:61883718-61883737 Msa0693060:intron 35.0%
ATAAAGCCACAATCTATCCA+GGG - chr4_4:61883760-61883779 None:intergenic 35.0%
AATAAAGCCACAATCTATCC+AGG - chr4_4:61883761-61883780 None:intergenic 35.0%
!! GAGCTTATTTTCATTGAGAG+CGG + chr4_4:61883975-61883994 Msa0693060:intron 35.0%
!! AGCTTATTTTCATTGAGAGC+GGG + chr4_4:61883976-61883995 Msa0693060:intron 35.0%
TGTGCCTGCATTGTAATTAT+TGG + chr4_4:61884124-61884143 Msa0693060:intron 35.0%
! AACAGTTTAAAACAGACGCA+AGG - chr4_4:61884179-61884198 None:intergenic 35.0%
!! GCGTCTGTTTTAAACTGTTT+AGG + chr4_4:61884180-61884199 Msa0693060:intron 35.0%
!! GTTTTAAACTGTTTAGGCAC+TGG + chr4_4:61884186-61884205 Msa0693060:intron 35.0%
! TTTAAACTGTTTAGGCACTG+GGG + chr4_4:61884188-61884207 Msa0693060:intron 35.0%
! TGTCACAAGACTTCTGTTTT+AGG - chr4_4:61884446-61884465 None:intergenic 35.0%
GCTCAATACTAGACATGTAA+TGG - chr4_4:61884598-61884617 None:intergenic 35.0%
AACCTAAAGTTCCAGTATAC+AGG - chr4_4:61884653-61884672 None:intergenic 35.0%
!!! TTGTTGCTTTGTTTTGAAGG+TGG + chr4_4:61884835-61884854 Msa0693060:intron 35.0%
!!! TGTTGCTTTGTTTTGAAGGT+GGG + chr4_4:61884836-61884855 Msa0693060:intron 35.0%
CATAGATGTTCTGTTCTTCT+AGG - chr4_4:61885149-61885168 None:intergenic 35.0%
TTACGCTGAAGACTTGAAAT+TGG + chr4_4:61885194-61885213 Msa0693060:three_prime_UTR 35.0%
TGTGTTTGTAACAGTGACTA+AGG + chr4_4:61885277-61885296 Msa0693060:three_prime_UTR 35.0%
GTGTTTGTAACAGTGACTAA+GGG + chr4_4:61885278-61885297 Msa0693060:three_prime_UTR 35.0%
TCAAGTTCAACAATGTACAG+TGG - chr4_4:61885365-61885384 None:intergenic 35.0%
!!! GTACCTACTGATTTTCTCGA+CGG - chr4_4:61879890-61879909 None:intergenic 40.0%
!! AAATCAGTAGGTACCGATAG+CGG + chr4_4:61879896-61879915 Msa0693060:five_prime_UTR 40.0%
ACACTATTTCCTACCGCTAT+CGG - chr4_4:61879912-61879931 None:intergenic 40.0%
! GTGCACGGTGTTTAAGATTA+AGG - chr4_4:61879968-61879987 None:intergenic 40.0%
!! GAAATGTTGGGTGGGTTATA+CGG + chr4_4:61880013-61880032 Msa0693060:exon 40.0%
!! GGTGGTTGGTTTATCTTCTT+CGG - chr4_4:61880062-61880081 None:intergenic 40.0%
ATAAACCAACCACCAATGTC+TGG + chr4_4:61880068-61880087 Msa0693060:CDS 40.0%
AAAGAGAAGAGGAGGGTTTA+CGG - chr4_4:61880126-61880145 None:intergenic 40.0%
!!! GTTTGTTTTGGGATCGAAGA+AGG - chr4_4:61880165-61880184 None:intergenic 40.0%
!!! AGGAGAGAGAATAGTTTTGG+TGG - chr4_4:61880203-61880222 None:intergenic 40.0%
! TGCAGGAGAGAGAATAGTTT+TGG - chr4_4:61880206-61880225 None:intergenic 40.0%
TGTTGTTCAACCATCTCAAC+CGG + chr4_4:61880258-61880277 Msa0693060:CDS 40.0%
AAAGGGAGAGAGATAGAGAT+AGG + chr4_4:61880464-61880483 Msa0693060:CDS 40.0%
AAGGGAGAGAGATAGAGATA+GGG + chr4_4:61880465-61880484 Msa0693060:CDS 40.0%
GAGATTGAATATTTCCGGTG+AGG + chr4_4:61880507-61880526 Msa0693060:CDS 40.0%
CTTATCAGACTTACTGTCAC+TGG - chr4_4:61880818-61880837 None:intergenic 40.0%
GTTTCTAAGTAGCAGTACTC+TGG - chr4_4:61880875-61880894 None:intergenic 40.0%
CACCAAGTCAAAACATCAGA+AGG - chr4_4:61881152-61881171 None:intergenic 40.0%
!!! TGTTTTGACTTGGTGATCAC+CGG + chr4_4:61881157-61881176 Msa0693060:intron 40.0%
TCAGAAACACAGTGAAGGAA+TGG - chr4_4:61881361-61881380 None:intergenic 40.0%
TGAAACTGTTAGAGAAGCTG+TGG + chr4_4:61881480-61881499 Msa0693060:intron 40.0%
GGTAGTAGTATACAAAGAGG+GGG + chr4_4:61881542-61881561 Msa0693060:intron 40.0%
GTAGTAGTATACAAAGAGGG+GGG + chr4_4:61881543-61881562 Msa0693060:intron 40.0%
TAGTAGTATACAAAGAGGGG+GGG + chr4_4:61881544-61881563 Msa0693060:intron 40.0%
!!! GTTGGTCAGTTTGTTTTTGG+TGG + chr4_4:61881587-61881606 Msa0693060:intron 40.0%
CTTGGCTTCCACACTTAATT+TGG + chr4_4:61881684-61881703 Msa0693060:intron 40.0%
CTAGGAAATGAAGTGTGAAC+AGG + chr4_4:61881837-61881856 Msa0693060:intron 40.0%
CTCTGGACCAGTATTTATCA+TGG - chr4_4:61882020-61882039 None:intergenic 40.0%
CAGTTGTTCCTTTCAGGATT+TGG + chr4_4:61882088-61882107 Msa0693060:intron 40.0%
AGAGAAGGGAGAGAAGATTT+GGG - chr4_4:61882164-61882183 None:intergenic 40.0%
AAGAGAAGGGAGAGAAGATT+TGG - chr4_4:61882165-61882184 None:intergenic 40.0%
GGTTAGAATTCCAACAGGTT+TGG - chr4_4:61882203-61882222 None:intergenic 40.0%
! GAGTTGGTTAGAATTCCAAC+AGG - chr4_4:61882208-61882227 None:intergenic 40.0%
GAGGAGAAGGGAAAATTTCA+GGG - chr4_4:61882282-61882301 None:intergenic 40.0%
TGAGGAGAAGGGAAAATTTC+AGG - chr4_4:61882283-61882302 None:intergenic 40.0%
! TGAAGTTAGCTTGAGGAGAA+GGG - chr4_4:61882294-61882313 None:intergenic 40.0%
GAATATTCGAGGGAAGGATA+AGG - chr4_4:61882358-61882377 None:intergenic 40.0%
ATTCCTCCATCAATATCACG+TGG + chr4_4:61882374-61882393 Msa0693060:intron 40.0%
ATTCCACGTGATATTGATGG+AGG - chr4_4:61882380-61882399 None:intergenic 40.0%
TAAAGAATCCACACTCACAC+CGG - chr4_4:61882499-61882518 None:intergenic 40.0%
GATGAGGGATAACTGATGTA+CGG + chr4_4:61882542-61882561 Msa0693060:intron 40.0%
! GAATGTATTGACAGCAACTG+AGG - chr4_4:61882572-61882591 None:intergenic 40.0%
! GGTTTAGGTTTCCACTAATG+GGG - chr4_4:61882612-61882631 None:intergenic 40.0%
! ACATTTGCAAGAGGCTTTGT+TGG + chr4_4:61882671-61882690 Msa0693060:intron 40.0%
!! CATTTGCAAGAGGCTTTGTT+GGG + chr4_4:61882672-61882691 Msa0693060:intron 40.0%
! GTTACACCCAGCAAAGTATT+TGG - chr4_4:61882744-61882763 None:intergenic 40.0%
GTTTGTGTCTGTACCTCAAA+GGG + chr4_4:61882815-61882834 Msa0693060:intron 40.0%
GAAACAAGTGATTCTTGTGG+AGG - chr4_4:61882860-61882879 None:intergenic 40.0%
AAGCCCAAGAGTAATTCACA+GGG + chr4_4:61882880-61882899 Msa0693060:intron 40.0%
GAATCCCTGTGAATTACTCT+TGG - chr4_4:61882887-61882906 None:intergenic 40.0%
ATTCAGAGCAGCACTAATAG+AGG - chr4_4:61882930-61882949 None:intergenic 40.0%
TCTGAATTCTGCCCATATGA+GGG + chr4_4:61882943-61882962 Msa0693060:intron 40.0%
!!! CTTTGTGCTTGTTTTTGTGG+TGG - chr4_4:61882994-61883013 None:intergenic 40.0%
CACCACAAAAACAAGCACAA+AGG + chr4_4:61882992-61883011 Msa0693060:intron 40.0%
ATTATGTTGGCCATGAAGGT+TGG - chr4_4:61883018-61883037 None:intergenic 40.0%
AGCAATTATGTTGGCCATGA+AGG - chr4_4:61883022-61883041 None:intergenic 40.0%
ATGGCTGACAAAGATGGAAA+GGG - chr4_4:61883068-61883087 None:intergenic 40.0%
ATATGGATGGCTGACAAAGA+TGG - chr4_4:61883074-61883093 None:intergenic 40.0%
TCCATTCTTCTCTTGTTCAG+AGG + chr4_4:61883130-61883149 Msa0693060:intron 40.0%
TCCTCTGAACAAGAGAAGAA+TGG - chr4_4:61883134-61883153 None:intergenic 40.0%
TTGTTCAGAGGAGATTCAGA+CGG + chr4_4:61883142-61883161 Msa0693060:intron 40.0%
GTAACGAAACTTGTAAGGGA+AGG - chr4_4:61883186-61883205 None:intergenic 40.0%
GTCGTGATGTTTCCTATAAG+TGG - chr4_4:61883248-61883267 None:intergenic 40.0%
TTGGAAATCAGCAATGCCAT+TGG + chr4_4:61883508-61883527 Msa0693060:intron 40.0%
GAAAAACAGTTGCTCATCCA+CGG - chr4_4:61883608-61883627 None:intergenic 40.0%
GCTAGGATTCATTAGCAGAT+TGG + chr4_4:61883717-61883736 Msa0693060:intron 40.0%
!!! GTTTTTTGATATGCTGTCCC+TGG + chr4_4:61883740-61883759 Msa0693060:intron 40.0%
TTCAGAGTGCAGTCAAGTTT+GGG + chr4_4:61883811-61883830 Msa0693060:intron 40.0%
GTATCACTTCATGATGCTGA+CGG + chr4_4:61883923-61883942 Msa0693060:intron 40.0%
AATGCAGGCACAAAGTCAAA+AGG - chr4_4:61884116-61884135 None:intergenic 40.0%
! TTAGGTTTTTGTCAGGGAGA+GGG - chr4_4:61884428-61884447 None:intergenic 40.0%
!! TTTAGGTTTTTGTCAGGGAG+AGG - chr4_4:61884429-61884448 None:intergenic 40.0%
ATTGGAGAGCTCTTTACAGA+GGG - chr4_4:61884472-61884491 None:intergenic 40.0%
AGCTCTCCAATCGTGAAAAT+TGG + chr4_4:61884481-61884500 Msa0693060:intron 40.0%
AAAAGCTTGTGCCTGTATAC+TGG + chr4_4:61884639-61884658 Msa0693060:intron 40.0%
TGCCTGTATACTGGAACTTT+AGG + chr4_4:61884648-61884667 Msa0693060:intron 40.0%
!!! GTTGCTTTGTTTTGAAGGTG+GGG + chr4_4:61884837-61884856 Msa0693060:intron 40.0%
ATTCTTACTGCTTCGTCAGT+GGG - chr4_4:61884968-61884987 None:intergenic 40.0%
! ACCTTGATGGTCGATACTTT+GGG + chr4_4:61885035-61885054 Msa0693060:CDS 40.0%
GCATTTGGTTAAGCCAATCT+TGG + chr4_4:61885248-61885267 Msa0693060:three_prime_UTR 40.0%
! CAAGTAAGGAGTTTTCAGTG+TGG - chr4_4:61885331-61885350 None:intergenic 40.0%
TTATCTTCTTCGGCGGAAGA+AGG - chr4_4:61880052-61880071 None:intergenic 45.0%
!! GGTTGGTTTATCTTCTTCGG+CGG - chr4_4:61880059-61880078 None:intergenic 45.0%
GGTGTGTAAAGAGAAGAGGA+GGG - chr4_4:61880133-61880152 None:intergenic 45.0%
AGGTGTGTAAAGAGAAGAGG+AGG - chr4_4:61880134-61880153 None:intergenic 45.0%
! TTGGGATCGAAGAAGGGTAT+GGG - chr4_4:61880158-61880177 None:intergenic 45.0%
! TTTGGGATCGAAGAAGGGTA+TGG - chr4_4:61880159-61880178 None:intergenic 45.0%
! TCTTGTAGGAGTACAGTCGA+CGG + chr4_4:61880282-61880301 Msa0693060:CDS 45.0%
TAGAGAAGCGGAGATGATGA+GGG + chr4_4:61880375-61880394 Msa0693060:CDS 45.0%
AGAGGGAGAGAGAAAGAGAA+AGG + chr4_4:61880446-61880465 Msa0693060:CDS 45.0%
GAGGGAGAGAGAAAGAGAAA+GGG + chr4_4:61880447-61880466 Msa0693060:CDS 45.0%
TAGAGATAGGGAGAGAGATC+AGG + chr4_4:61880477-61880496 Msa0693060:CDS 45.0%
AGAGATAGGGAGAGAGATCA+GGG + chr4_4:61880478-61880497 Msa0693060:CDS 45.0%
ATATTTCCGGTGAGGAAGCA+TGG + chr4_4:61880515-61880534 Msa0693060:CDS 45.0%
ACTAAATCCATCCACACTCC+CGG - chr4_4:61880614-61880633 None:intergenic 45.0%
! TAGTATTGGGAAGTCGGAGA+CGG + chr4_4:61880630-61880649 Msa0693060:CDS 45.0%
! TCAGAGGATGATGGCAAAGA+TGG + chr4_4:61880693-61880712 Msa0693060:CDS 45.0%
! CAGAGGATGATGGCAAAGAT+GGG + chr4_4:61880694-61880713 Msa0693060:CDS 45.0%
! AGAGGATGATGGCAAAGATG+GGG + chr4_4:61880695-61880714 Msa0693060:CDS 45.0%
CAAAGATGGGGTGGAAACAA+GGG + chr4_4:61880707-61880726 Msa0693060:CDS 45.0%
AGGGATTACAACTCCGTTGA+TGG + chr4_4:61880753-61880772 Msa0693060:CDS 45.0%
! TCGGTTTTCTTCGCCATCAA+CGG - chr4_4:61880769-61880788 None:intergenic 45.0%
TGGCGAAGAAAACCGATAGA+CGG + chr4_4:61880773-61880792 Msa0693060:CDS 45.0%
CTAAGTAGCAGTACTCTGGT+AGG - chr4_4:61880871-61880890 None:intergenic 45.0%
!!! GGCCTTCTGATGTTTTGACT+TGG + chr4_4:61881147-61881166 Msa0693060:intron 45.0%
TAGAAGAAAGGAGGTCCAAG+TGG + chr4_4:61881420-61881439 Msa0693060:intron 45.0%
AGAAGAAAGGAGGTCCAAGT+GGG + chr4_4:61881421-61881440 Msa0693060:intron 45.0%
! TGGAAGCCAAGTTGAGCAAT+GGG - chr4_4:61881675-61881694 None:intergenic 45.0%
GAGAAGGGAGAGAAGATTTG+GGG - chr4_4:61882163-61882182 None:intergenic 45.0%
TCTTCTCTCCCTTCTCTTTG+TGG + chr4_4:61882167-61882186 Msa0693060:intron 45.0%
GAATTCCAACAGGTTTGGCA+GGG - chr4_4:61882198-61882217 None:intergenic 45.0%
AGAATTCCAACAGGTTTGGC+AGG - chr4_4:61882199-61882218 None:intergenic 45.0%
CTAGTCAGCATGGATAGAGT+TGG - chr4_4:61882224-61882243 None:intergenic 45.0%
!! TTTCAGGGTGGAGTATTGTC+AGG - chr4_4:61882267-61882286 None:intergenic 45.0%
GAGAAGGGAAAATTTCAGGG+TGG - chr4_4:61882279-61882298 None:intergenic 45.0%
! CTGAAGTTAGCTTGAGGAGA+AGG - chr4_4:61882295-61882314 None:intergenic 45.0%
CTTCTCCTCAAGCTAACTTC+AGG + chr4_4:61882293-61882312 Msa0693060:intron 45.0%
! ACTCTCCTGAAGTTAGCTTG+AGG - chr4_4:61882301-61882320 None:intergenic 45.0%
TGCTGCATGACAATGGATGA+AGG - chr4_4:61882327-61882346 None:intergenic 45.0%
GAGAGATTGCTGCATGACAA+TGG - chr4_4:61882334-61882353 None:intergenic 45.0%
ATGGAGGAATATTCGAGGGA+AGG - chr4_4:61882364-61882383 None:intergenic 45.0%
! CTCACACCGGCTAGTTATTA+TGG - chr4_4:61882486-61882505 None:intergenic 45.0%
TCCAAGAGGAACATGAGTCT+GGG - chr4_4:61882524-61882543 None:intergenic 45.0%
ATCCAAGAGGAACATGAGTC+TGG - chr4_4:61882525-61882544 None:intergenic 45.0%
ACTCATGTTCCTCTTGGATG+AGG + chr4_4:61882526-61882545 Msa0693060:intron 45.0%
CTCATGTTCCTCTTGGATGA+GGG + chr4_4:61882527-61882546 Msa0693060:intron 45.0%
TCAGTTATCCCTCATCCAAG+AGG - chr4_4:61882538-61882557 None:intergenic 45.0%
! ACTAATGGGGTACCTGACAA+AGG - chr4_4:61882599-61882618 None:intergenic 45.0%
TTTGTCAGGTACCCCATTAG+TGG + chr4_4:61882598-61882617 Msa0693060:intron 45.0%
GGTTTGTGTCTGTACCTCAA+AGG + chr4_4:61882814-61882833 Msa0693060:intron 45.0%
! GGAGGAGTAAAAGAGTATGC+TGG - chr4_4:61882842-61882861 None:intergenic 45.0%
CAAGCCCAAGAGTAATTCAC+AGG + chr4_4:61882879-61882898 Msa0693060:intron 45.0%
TTCACAGGGATTCTGCATCA+TGG + chr4_4:61882894-61882913 Msa0693060:intron 45.0%
CTCTGAATTCTGCCCATATG+AGG + chr4_4:61882942-61882961 Msa0693060:intron 45.0%
!!! GGCCTTTGTGCTTGTTTTTG+TGG - chr4_4:61882997-61883016 None:intergenic 45.0%
GATGGCTGACAAAGATGGAA+AGG - chr4_4:61883069-61883088 None:intergenic 45.0%
ATTCTCAGGGGAGATGCATA+TGG - chr4_4:61883091-61883110 None:intergenic 45.0%
AAGAGAAGAATGGACAGCAG+AGG - chr4_4:61883124-61883143 None:intergenic 45.0%
AATCAGCAATGCCATTGGTC+TGG + chr4_4:61883513-61883532 Msa0693060:intron 45.0%
TGCTACATACACCAGACCAA+TGG - chr4_4:61883527-61883546 None:intergenic 45.0%
TTGGTCTGGTGTATGTAGCA+TGG + chr4_4:61883527-61883546 Msa0693060:intron 45.0%
GTAGTTGTAAATCGGGAGCT+AGG + chr4_4:61883700-61883719 Msa0693060:intron 45.0%
CTTCAGAGTGCAGTCAAGTT+TGG + chr4_4:61883810-61883829 Msa0693060:intron 45.0%
TGAAAGGAAACTCAACTCCC+AGG - chr4_4:61884002-61884021 None:intergenic 45.0%
TCTTAGAAAGAGGATGGGGA+AGG + chr4_4:61884354-61884373 Msa0693060:intron 45.0%
! TAGGTTTTTGTCAGGGAGAG+GGG - chr4_4:61884427-61884446 None:intergenic 45.0%
GATTGGAGAGCTCTTTACAG+AGG - chr4_4:61884473-61884492 None:intergenic 45.0%
AGATGATGAGCTGGAAGATG+AGG + chr4_4:61884871-61884890 Msa0693060:CDS 45.0%
GGATCAGAATGTGCCAAGTA+TGG + chr4_4:61884896-61884915 Msa0693060:CDS 45.0%
TCGGGTTACTGTTCCATACT+TGG - chr4_4:61884912-61884931 None:intergenic 45.0%
GCTTCGTCAGTGGGAAAATT+TGG - chr4_4:61884959-61884978 None:intergenic 45.0%
GATTCTTACTGCTTCGTCAG+TGG - chr4_4:61884969-61884988 None:intergenic 45.0%
! AAAGCGCTTGTTGACCTTGA+TGG + chr4_4:61885022-61885041 Msa0693060:CDS 45.0%
! GACCTTGATGGTCGATACTT+TGG + chr4_4:61885034-61885053 Msa0693060:CDS 45.0%
! CCTTGATGGTCGATACTTTG+GGG + chr4_4:61885036-61885055 Msa0693060:CDS 45.0%
! CTTGATGGTCGATACTTTGG+GGG + chr4_4:61885037-61885056 Msa0693060:CDS 45.0%
CTTGTCCTCGTCGTAAAATG+TGG - chr4_4:61885077-61885096 None:intergenic 45.0%
AATGAGTTAGCTCCAATGCC+AGG + chr4_4:61885106-61885125 Msa0693060:CDS 45.0%
! GTGACTAAGGGTTGTTGCTT+AGG + chr4_4:61885290-61885309 Msa0693060:three_prime_UTR 45.0%
TGGCGACATTAGTGCAAGTA+AGG - chr4_4:61885345-61885364 None:intergenic 45.0%
AGTGGCGACAGCTTATTTGA+TGG - chr4_4:61885426-61885445 None:intergenic 45.0%
AAACCTCTCCTCGACGAAGA+AGG + chr4_4:61879856-61879875 Msa0693060:five_prime_UTR 50.0%
AACCTCTCCTCGACGAAGAA+GGG + chr4_4:61879857-61879876 Msa0693060:five_prime_UTR 50.0%
TCGATTTCCCTTCTTCGTCG+AGG - chr4_4:61879867-61879886 None:intergenic 50.0%
CGACCGTCGAGAAAATCAGT+AGG + chr4_4:61879884-61879903 Msa0693060:five_prime_UTR 50.0%
CGCAAACACAGAAACGTGCA+CGG - chr4_4:61879983-61880002 None:intergenic 50.0%
GCACGTTTCTGTGTTTGCGT+CGG + chr4_4:61879984-61880003 Msa0693060:five_prime_UTR 50.0%
CGTCGGAGCTTCGAAATGTT+GGG + chr4_4:61880001-61880020 Msa0693060:exon 50.0%
GGAGCTTCGAAATGTTGGGT+GGG + chr4_4:61880005-61880024 Msa0693060:exon 50.0%
! GATGACCAGACATTGGTGGT+TGG - chr4_4:61880076-61880095 None:intergenic 50.0%
CTGGTCATCCAGCACCAAAA+TGG + chr4_4:61880087-61880106 Msa0693060:CDS 50.0%
! GGGAGGTGTGTAAAGAGAAG+AGG - chr4_4:61880137-61880156 None:intergenic 50.0%
! TGGGATCGAAGAAGGGTATG+GGG - chr4_4:61880157-61880176 None:intergenic 50.0%
TCGAGTGGCGAAGCAAGAAT+CGG - chr4_4:61880235-61880254 None:intergenic 50.0%
GGTTGAACAACATCGTCGAG+TGG - chr4_4:61880250-61880269 None:intergenic 50.0%
GACTGTACTCCTACAAGAGC+CGG - chr4_4:61880280-61880299 None:intergenic 50.0%
TCATAATCATTCGGCCTCGC+CGG - chr4_4:61880325-61880344 None:intergenic 50.0%
! AGTATCGGAGGGAGAAGAAG+AGG + chr4_4:61880347-61880366 Msa0693060:CDS 50.0%
GAAGAGGAAGGCTAGAGAAG+CGG + chr4_4:61880363-61880382 Msa0693060:CDS 50.0%
CTAGAGAAGCGGAGATGATG+AGG + chr4_4:61880374-61880393 Msa0693060:CDS 50.0%
CTAAATCCATCCACACTCCC+GGG - chr4_4:61880613-61880632 None:intergenic 50.0%
GCAAAGATGGGGTGGAAACA+AGG + chr4_4:61880706-61880725 Msa0693060:CDS 50.0%
GGCGAAGAAAACCGATAGAC+GGG + chr4_4:61880774-61880793 Msa0693060:CDS 50.0%
AAGAAAACCGATAGACGGGC+TGG + chr4_4:61880778-61880797 Msa0693060:CDS 50.0%
! AGAAAACCGATAGACGGGCT+GGG + chr4_4:61880779-61880798 Msa0693060:CDS 50.0%
AATAACCCCAGCCCGTCTAT+CGG - chr4_4:61880788-61880807 None:intergenic 50.0%
! TGCTTGTTAACGACGCTGAG+AGG + chr4_4:61880946-61880965 Msa0693060:intron 50.0%
ACTGTTAGAGAAGCTGTGGC+CGG + chr4_4:61881484-61881503 Msa0693060:intron 50.0%
AGAGGGGGGGAATGTAATTG+AGG + chr4_4:61881557-61881576 Msa0693060:intron 50.0%
GAGGGGGGGAATGTAATTGA+GGG + chr4_4:61881558-61881577 Msa0693060:intron 50.0%
ACAGCTCCCATTGCTCAACT+TGG + chr4_4:61881666-61881685 Msa0693060:intron 50.0%
! GTGGAAGCCAAGTTGAGCAA+TGG - chr4_4:61881676-61881695 None:intergenic 50.0%
CAGGGTCTCCAAATCCTGAA+AGG - chr4_4:61882099-61882118 None:intergenic 50.0%
GGGATAGGCCACAAAGAGAA+GGG - chr4_4:61882178-61882197 None:intergenic 50.0%
AGGGATAGGCCACAAAGAGA+AGG - chr4_4:61882179-61882198 None:intergenic 50.0%
!! AGCTGGTTTGCTAGTCAGCA+TGG - chr4_4:61882234-61882253 None:intergenic 50.0%
TGACTAGCAAACCAGCTCGT+TGG + chr4_4:61882237-61882256 Msa0693060:intron 50.0%
GACTAGCAAACCAGCTCGTT+GGG + chr4_4:61882238-61882257 Msa0693060:intron 50.0%
ATAACTAGCCGGTGTGAGTG+TGG + chr4_4:61882488-61882507 Msa0693060:intron 50.0%
TCCCAGACTCATGTTCCTCT+TGG + chr4_4:61882520-61882539 Msa0693060:intron 50.0%
! TGGGGTACCTGACAAAGGTA+AGG - chr4_4:61882594-61882613 None:intergenic 50.0%
AGAGTATGCTGGTCCCTTTG+AGG - chr4_4:61882831-61882850 None:intergenic 50.0%
ACAGGGATTCTGCATCATGG+AGG + chr4_4:61882897-61882916 Msa0693060:intron 50.0%
AGCACAAAGGCCAACCTTCA+TGG + chr4_4:61883005-61883024 Msa0693060:intron 50.0%
TCAGGGGAGATGCATATGGA+TGG - chr4_4:61883087-61883106 None:intergenic 50.0%
ATGCATCTCCCCTGAGAATG+AGG + chr4_4:61883092-61883111 Msa0693060:intron 50.0%
AGGCAAAGGCCTCATTCTCA+GGG - chr4_4:61883104-61883123 None:intergenic 50.0%
AGAATGGACAGCAGAGGCAA+AGG - chr4_4:61883118-61883137 None:intergenic 50.0%
AACAGTTGCTCATCCACGGA+GGG - chr4_4:61883604-61883623 None:intergenic 50.0%
AAACAGTTGCTCATCCACGG+AGG - chr4_4:61883605-61883624 None:intergenic 50.0%
TGCTGTCCCTGGATAGATTG+TGG + chr4_4:61883751-61883770 Msa0693060:intron 50.0%
! ATTTTCATTGAGAGCGGGCC+TGG + chr4_4:61883981-61884000 Msa0693060:intron 50.0%
! TTTTCATTGAGAGCGGGCCT+GGG + chr4_4:61883982-61884001 Msa0693060:intron 50.0%
!! AAACTGTTTAGGCACTGGGG+TGG + chr4_4:61884191-61884210 Msa0693060:intron 50.0%
! AGGTTTTTGTCAGGGAGAGG+GGG - chr4_4:61884426-61884445 None:intergenic 50.0%
!!! TTTGTTTTGAAGGTGGGGCC+TGG + chr4_4:61884842-61884861 Msa0693060:intron 50.0%
AGCTCATCATCTACCTCACC+AGG - chr4_4:61884863-61884882 None:intergenic 50.0%
TGGTGAGGTAGATGATGAGC+TGG + chr4_4:61884862-61884881 Msa0693060:CDS 50.0%
GATGAGCTGGAAGATGAGGT+AGG + chr4_4:61884875-61884894 Msa0693060:CDS 50.0%
!! CCCCAAAGTATCGACCATCA+AGG - chr4_4:61885039-61885058 None:intergenic 50.0%
CCAGGAATTTCTCCTGGCAT+TGG - chr4_4:61885121-61885140 None:intergenic 50.0%
CCAATGCCAGGAGAAATTCC+TGG + chr4_4:61885118-61885137 Msa0693060:CDS 50.0%
GTGAAGCCAGGAATTTCTCC+TGG - chr4_4:61885127-61885146 None:intergenic 50.0%
CTGTTCTTCTAGGTGAAGCC+AGG - chr4_4:61885139-61885158 None:intergenic 50.0%
TTCCCTTCTTCGTCGAGGAG+AGG - chr4_4:61879862-61879881 None:intergenic 55.0%
!! CAGTAGGTACCGATAGCGGT+AGG + chr4_4:61879900-61879919 Msa0693060:five_prime_UTR 55.0%
GCGTCGGAGCTTCGAAATGT+TGG + chr4_4:61880000-61880019 Msa0693060:exon 55.0%
CGGAGCTTCGAAATGTTGGG+TGG + chr4_4:61880004-61880023 Msa0693060:exon 55.0%
TCTTCTTCGGCGGAAGAAGG+TGG - chr4_4:61880049-61880068 None:intergenic 55.0%
GCTGGATGACCAGACATTGG+TGG - chr4_4:61880080-61880099 None:intergenic 55.0%
! GGTGCTGGATGACCAGACAT+TGG - chr4_4:61880083-61880102 None:intergenic 55.0%
AGAGGAGGGTTTACGGAGAG+TGG - chr4_4:61880119-61880138 None:intergenic 55.0%
! GATCGAAGAAGGGTATGGGG+AGG - chr4_4:61880154-61880173 None:intergenic 55.0%
CCTACAAGAGCCGGTTGAGA+TGG - chr4_4:61880271-61880290 None:intergenic 55.0%
! CCATCTCAACCGGCTCTTGT+AGG + chr4_4:61880268-61880287 Msa0693060:CDS 55.0%
! AGGAGTACAGTCGACGGTGA+TGG + chr4_4:61880288-61880307 Msa0693060:CDS 55.0%
! AGTACAGTCGACGGTGATGG+AGG + chr4_4:61880291-61880310 Msa0693060:CDS 55.0%
!! GGTGATGGAGGAGTACGATC+CGG + chr4_4:61880303-61880322 Msa0693060:CDS 55.0%
TCGGAGGGAGAAGAAGAGGA+AGG + chr4_4:61880351-61880370 Msa0693060:CDS 55.0%
TGATGAGGGAGCTGGAGAGA+CGG + chr4_4:61880389-61880408 Msa0693060:CDS 55.0%
AGGAGGAGAGGGAGAAAGAG+AGG + chr4_4:61880422-61880441 Msa0693060:CDS 55.0%
GGAGGAGAGGGAGAAAGAGA+GGG + chr4_4:61880423-61880442 Msa0693060:CDS 55.0%
AGAGGGAGAAAGAGAGGGAG+AGG + chr4_4:61880428-61880447 Msa0693060:CDS 55.0%
GAGGGAGAAAGAGAGGGAGA+GGG + chr4_4:61880429-61880448 Msa0693060:CDS 55.0%
CCTTCTCCATGCTTCCTCAC+CGG - chr4_4:61880524-61880543 None:intergenic 55.0%
! GAAGCATGGAGAAGGCGTGT+GGG + chr4_4:61880529-61880548 Msa0693060:CDS 55.0%
! AAGCATGGAGAAGGCGTGTG+GGG + chr4_4:61880530-61880549 Msa0693060:CDS 55.0%
ATTGGGAAGTCGGAGACGGT+TGG + chr4_4:61880634-61880653 Msa0693060:CDS 55.0%
TTGGGAAGTCGGAGACGGTT+GGG + chr4_4:61880635-61880654 Msa0693060:CDS 55.0%
AAGTCGGAGACGGTTGGGTT+GGG + chr4_4:61880640-61880659 Msa0693060:CDS 55.0%
GACTGCTGCTCAGAGGATGA+TGG + chr4_4:61880684-61880703 Msa0693060:CDS 55.0%
! GGATGATGGCAAAGATGGGG+TGG + chr4_4:61880698-61880717 Msa0693060:CDS 55.0%
ATGGGGTGGAAACAAGGGCA+AGG + chr4_4:61880712-61880731 Msa0693060:CDS 55.0%
TGGGGTGGAAACAAGGGCAA+GGG + chr4_4:61880713-61880732 Msa0693060:CDS 55.0%
TGGAAACAAGGGCAAGGGCT+TGG + chr4_4:61880718-61880737 Msa0693060:CDS 55.0%
GGAAACAAGGGCAAGGGCTT+GGG + chr4_4:61880719-61880738 Msa0693060:CDS 55.0%
GGCTTGGGAAACAGGAGCAA+GGG + chr4_4:61880734-61880753 Msa0693060:CDS 55.0%
!! GAAAACCGATAGACGGGCTG+GGG + chr4_4:61880780-61880799 Msa0693060:CDS 55.0%
GGAAGGCTAACGAACACGTC+CGG - chr4_4:61881506-61881525 None:intergenic 55.0%
CCAACAGGTTTGGCAGGGAT+AGG - chr4_4:61882193-61882212 None:intergenic 55.0%
CCTATCCCTGCCAAACCTGT+TGG + chr4_4:61882190-61882209 Msa0693060:intron 55.0%
GGGATTCTGCATCATGGAGG+AGG + chr4_4:61882900-61882919 Msa0693060:intron 55.0%
GGCAAAGGCCTCATTCTCAG+GGG - chr4_4:61883103-61883122 None:intergenic 55.0%
GAGGCAAAGGCCTCATTCTC+AGG - chr4_4:61883105-61883124 None:intergenic 55.0%
!! GATCACTTTTCCTCCCTCCG+TGG + chr4_4:61883588-61883607 Msa0693060:intron 55.0%
! TTTTTGTCAGGGAGAGGGGG+TGG - chr4_4:61884423-61884442 None:intergenic 55.0%
! GCGTGCCACATTTTACGACG+AGG + chr4_4:61885069-61885088 Msa0693060:CDS 55.0%
TCTTCGGCGGAAGAAGGTGG+AGG - chr4_4:61880046-61880065 None:intergenic 60.0%
AGGGTTTACGGAGAGTGGCG+GGG - chr4_4:61880114-61880133 None:intergenic 60.0%
GAGGGTTTACGGAGAGTGGC+GGG - chr4_4:61880115-61880134 None:intergenic 60.0%
GGAGGGTTTACGGAGAGTGG+CGG - chr4_4:61880116-61880135 None:intergenic 60.0%
GCAAGAATCGGCTGTGGTGC+AGG - chr4_4:61880223-61880242 None:intergenic 60.0%
GGCGAAGCAAGAATCGGCTG+TGG - chr4_4:61880229-61880248 None:intergenic 60.0%
AGCGGAGATGATGAGGGAGC+TGG + chr4_4:61880381-61880400 Msa0693060:CDS 60.0%
! CCGGTGAGGAAGCATGGAGA+AGG + chr4_4:61880521-61880540 Msa0693060:CDS 60.0%
! GGAAGCATGGAGAAGGCGTG+TGG + chr4_4:61880528-61880547 Msa0693060:CDS 60.0%
! AGAAGGCGTGTGGGGATGAG+TGG + chr4_4:61880538-61880557 Msa0693060:CDS 60.0%
AATCCATCCACACTCCCGGG+AGG - chr4_4:61880610-61880629 None:intergenic 60.0%
GAAGTCGGAGACGGTTGGGT+TGG + chr4_4:61880639-61880658 Msa0693060:CDS 60.0%
!! GAGACGGTTGGGTTGGGAGT+TGG + chr4_4:61880646-61880665 Msa0693060:CDS 60.0%
!! GTTGGGTTGGGAGTTGGTGC+TGG + chr4_4:61880652-61880671 Msa0693060:CDS 60.0%
!! GGTTGGGAGTTGGTGCTGGT+GGG + chr4_4:61880656-61880675 Msa0693060:CDS 60.0%
GGCAGATGACTGCTGCTCAG+AGG + chr4_4:61880677-61880696 Msa0693060:CDS 60.0%
AGGGCAAGGGCTTGGGAAAC+AGG + chr4_4:61880726-61880745 Msa0693060:CDS 60.0%
GGGCTTGGGAAACAGGAGCA+AGG + chr4_4:61880733-61880752 Msa0693060:CDS 60.0%
GAAAGGAGGTCCAAGTGGGC+TGG + chr4_4:61881425-61881444 Msa0693060:intron 60.0%
CTAACAGAGGCCAGCCCACT+TGG - chr4_4:61881438-61881457 None:intergenic 60.0%
TGTCAGGACACCCAACGAGC+TGG - chr4_4:61882251-61882270 None:intergenic 60.0%
AGTTGCTCATCCACGGAGGG+AGG - chr4_4:61883601-61883620 None:intergenic 60.0%
TTTGAAGGTGGGGCCTGGTG+AGG + chr4_4:61884847-61884866 Msa0693060:intron 60.0%
CGGCGGAAGAAGGTGGAGGT+AGG - chr4_4:61880042-61880061 None:intergenic 65.0%
!! GAGAGTGGCGGGGGCCATTT+TGG - chr4_4:61880104-61880123 None:intergenic 65.0%
GGGTTTACGGAGAGTGGCGG+GGG - chr4_4:61880113-61880132 None:intergenic 65.0%
! TGGAGGAGTACGATCCGGCG+AGG + chr4_4:61880308-61880327 Msa0693060:CDS 65.0%
TGAGGGAGCTGGAGAGACGG+AGG + chr4_4:61880392-61880411 Msa0693060:CDS 65.0%
GAGGGAGCTGGAGAGACGGA+GGG + chr4_4:61880393-61880412 Msa0693060:CDS 65.0%
GAGGGAGGAGGAGGAGGAGA+GGG + chr4_4:61880411-61880430 Msa0693060:CDS 65.0%
AGGCGTGTGGGGATGAGTGG+AGG + chr4_4:61880541-61880560 Msa0693060:CDS 65.0%
CGTGTGGGGATGAGTGGAGG+AGG + chr4_4:61880544-61880563 Msa0693060:CDS 65.0%
GTGGGGATGAGTGGAGGAGG+TGG + chr4_4:61880547-61880566 Msa0693060:CDS 65.0%
GGGATGAGTGGAGGAGGTGG+TGG + chr4_4:61880550-61880569 Msa0693060:CDS 65.0%
! AGTGGAGGAGGTGGTGGCAG+TGG + chr4_4:61880556-61880575 Msa0693060:CDS 65.0%
! GAGGTGGTGGCAGTGGTGGA+CGG + chr4_4:61880563-61880582 Msa0693060:CDS 65.0%
!! AGGTGGTGGCAGTGGTGGAC+GGG + chr4_4:61880564-61880583 Msa0693060:CDS 65.0%
!! GGGTTGGGAGTTGGTGCTGG+TGG + chr4_4:61880655-61880674 Msa0693060:CDS 65.0%
TTGTCAGGGAGAGGGGGTGG+AGG - chr4_4:61884420-61884439 None:intergenic 65.0%
!! GGCGGGGGCCATTTTGGTGC+TGG - chr4_4:61880098-61880117 None:intergenic 70.0%
GGAGCTGGAGAGACGGAGGG+AGG + chr4_4:61880396-61880415 Msa0693060:CDS 70.0%
GCTGGAGAGACGGAGGGAGG+AGG + chr4_4:61880399-61880418 Msa0693060:CDS 70.0%
GGAGAGACGGAGGGAGGAGG+AGG + chr4_4:61880402-61880421 Msa0693060:CDS 70.0%
GAGACGGAGGGAGGAGGAGG+AGG + chr4_4:61880405-61880424 Msa0693060:CDS 70.0%
GGAGGGAGGAGGAGGAGGAG+AGG + chr4_4:61880410-61880429 Msa0693060:CDS 70.0%
! GGAGGAGGTGGTGGCAGTGG+TGG + chr4_4:61880559-61880578 Msa0693060:CDS 70.0%
!! GGTGGTGGCAGTGGTGGACG+GGG + chr4_4:61880565-61880584 Msa0693060:CDS 70.0%
TCCACACTCCCGGGAGGCGA+TGG - chr4_4:61880604-61880623 None:intergenic 70.0%
! TCGCCTCCCGGGAGTGTGGA+TGG + chr4_4:61880604-61880623 Msa0693060:CDS 70.0%
!! GTGGTGGACGGGGTGTGCCG+AGG + chr4_4:61880575-61880594 Msa0693060:CDS 75.0%
CCGGGAGGCGATGGCGACCT+CGG - chr4_4:61880595-61880614 None:intergenic 75.0%
CCGAGGTCGCCATCGCCTCC+CGG + chr4_4:61880592-61880611 Msa0693060:CDS 75.0%
CGAGGTCGCCATCGCCTCCC+GGG + chr4_4:61880593-61880612 Msa0693060:CDS 75.0%
GCCATCGCCTCCCGGGAGTG+TGG + chr4_4:61880600-61880619 Msa0693060:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 61879831 61885525 61879831 ID=Msa0693060;Name=Msa0693060
chr4_4 mRNA 61879831 61885525 61879831 ID=Msa0693060-mRNA-1;Parent=Msa0693060;Name=Msa0693060-mRNA-1;_AED=0.01;_eAED=0.01;_QI=185|1|1|1|1|1|2|375|392
chr4_4 exon 61879831 61880897 61879831 ID=Msa0693060-mRNA-1:exon:17172;Parent=Msa0693060-mRNA-1
chr4_4 exon 61884854 61885525 61884854 ID=Msa0693060-mRNA-1:exon:17173;Parent=Msa0693060-mRNA-1
chr4_4 five_prime_UTR 61879831 61880015 61879831 ID=Msa0693060-mRNA-1:five_prime_utr;Parent=Msa0693060-mRNA-1
chr4_4 CDS 61880016 61880897 61880016 ID=Msa0693060-mRNA-1:cds;Parent=Msa0693060-mRNA-1
chr4_4 CDS 61884854 61885150 61884854 ID=Msa0693060-mRNA-1:cds;Parent=Msa0693060-mRNA-1
chr4_4 three_prime_UTR 61885151 61885525 61885151 ID=Msa0693060-mRNA-1:three_prime_utr;Parent=Msa0693060-mRNA-1
Gene Sequence

>Msa0693060

ATGTTGGGTGGGTTATACGGAGACCTACCTCCACCTTCTTCCGCCGAAGAAGATAAACCAACCACCAATGTCTGGTCATCCAGCACCAAAATGGCCCCCGCCACTCTCCGTAAACCCTCCTCTTCTCTTTACACACCTCCCCATACCCTTCTTCGATCCCAAAACAAACCTAAAATTGTCAATTCCACCAAAACTATTCTCTCTCCTGCACCACAGCCGATTCTTGCTTCGCCACTCGACGATGTTGTTCAACCATCTCAACCGGCTCTTGTAGGAGTACAGTCGACGGTGATGGAGGAGTACGATCCGGCGAGGCCGAATGATTATGAAGAGTATCGGAGGGAGAAGAAGAGGAAGGCTAGAGAAGCGGAGATGATGAGGGAGCTGGAGAGACGGAGGGAGGAGGAGGAGGAGAGGGAGAAAGAGAGGGAGAGGGAGAGAGAAAGAGAAAGGGAGAGAGATAGAGATAGGGAGAGAGATCAGGGAGATTCGAGATTGAATATTTCCGGTGAGGAAGCATGGAGAAGGCGTGTGGGGATGAGTGGAGGAGGTGGTGGCAGTGGTGGACGGGGTGTGCCGAGGTCGCCATCGCCTCCCGGGAGTGTGGATGGATTTAGTATTGGGAAGTCGGAGACGGTTGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACTGCTGCTCAGAGGATGATGGCAAAGATGGGGTGGAAACAAGGGCAAGGGCTTGGGAAACAGGAGCAAGGGATTACAACTCCGTTGATGGCGAAGAAAACCGATAGACGGGCTGGGGTTATTGTTAATGCCAGTGACAGTAAGTCTGATAAGAAAGTTAAGAGTGTTAACATCAATGGTGTACCTACCAGAGTACTGCTACTTAGAAACATGGTGGGGCCTGGTGAGGTAGATGATGAGCTGGAAGATGAGGTAGGATCAGAATGTGCCAAGTATGGAACAGTAACCCGAGTTCTGATATTTGAGATAACAGAGCCAAATTTTCCCACTGACGAAGCAGTAAGAATCTTTGTTCAGTTTGAGAGATCTGAAGAAACAACTAAAGCGCTTGTTGACCTTGATGGTCGATACTTTGGGGGTAGAACAGTGCGTGCCACATTTTACGACGAGGACAAGTTTAGCAAGAATGAGTTAGCTCCAATGCCAGGAGAAATTCCTGGCTTCACCTAG
Protein sequence

>Msa0693060

MLGGLYGDLPPPSSAEEDKPTTNVWSSSTKMAPATLRKPSSSLYTPPHTLLRSQNKPKIVNSTKTILSPAPQPILASPLDDVVQPSQPALVGVQSTVMEEYDPARPNDYEEYRREKKRKAREAEMMRELERRREEEEEREKERERERERERERDRDRERDQGDSRLNISGEEAWRRRVGMSGGGGGSGGRGVPRSPSPPGSVDGFSIGKSETVGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKQEQGITTPLMAKKTDRRAGVIVNASDSKSDKKVKSVNINGVPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPTDEAVRIFVQFERSEETTKALVDLDGRYFGGRTVRATFYDEDKFSKNELAPMPGEIPGFT*