Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0310860 | XP_003593271.1 | 89.944 | 179 | 11 | 1 | 1 | 172 | 1 | 179 | 1.85e-107 | 316 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0310860 | Q2HVA3 | 89.944 | 179 | 11 | 1 | 1 | 172 | 1 | 179 | 8.82e-108 | 316 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0310860 | 0.823494 | 1.343942e-53 | -8.615850e-47 |
| Msa0006550 | Msa0310860 | 0.800906 | 1.156644e-48 | -8.615850e-47 |
| Msa0007440 | Msa0310860 | 0.808905 | 2.461212e-50 | -8.615850e-47 |
| Msa0008840 | Msa0310860 | 0.809391 | 1.936727e-50 | -8.615850e-47 |
| Msa0010490 | Msa0310860 | 0.823604 | 1.266297e-53 | -8.615850e-47 |
| Msa0010500 | Msa0310860 | 0.820259 | 7.537386e-53 | -8.615850e-47 |
| Msa0015090 | Msa0310860 | 0.806924 | 6.494575e-50 | -8.615850e-47 |
| Msa0020390 | Msa0310860 | 0.833287 | 5.817274e-56 | -8.615850e-47 |
| Msa0023000 | Msa0310860 | 0.838889 | 2.198484e-57 | -8.615850e-47 |
| Msa0029260 | Msa0310860 | 0.833572 | 4.938988e-56 | -8.615850e-47 |
| Msa0033110 | Msa0310860 | 0.818520 | 1.878206e-52 | -8.615850e-47 |
| Msa0033260 | Msa0310860 | 0.809107 | 2.228485e-50 | -8.615850e-47 |
| Msa0038870 | Msa0310860 | 0.807750 | 4.339165e-50 | -8.615850e-47 |
| Msa0051860 | Msa0310860 | 0.816455 | 5.482606e-52 | -8.615850e-47 |
| Msa0054750 | Msa0310860 | 0.817778 | 2.764043e-52 | -8.615850e-47 |
| Msa0071250 | Msa0310860 | 0.816738 | 4.737856e-52 | -8.615850e-47 |
| Msa0084940 | Msa0310860 | 0.804350 | 2.253692e-49 | -8.615850e-47 |
| Msa0086420 | Msa0310860 | 0.831747 | 1.401129e-55 | -8.615850e-47 |
| Msa0090550 | Msa0310860 | 0.805765 | 1.139620e-49 | -8.615850e-47 |
| Msa0091410 | Msa0310860 | 0.812636 | 3.838047e-51 | -8.615850e-47 |
| Msa0091610 | Msa0310860 | 0.807182 | 5.726761e-50 | -8.615850e-47 |
| Msa0093010 | Msa0310860 | 0.809491 | 1.843457e-50 | -8.615850e-47 |
| Msa0096980 | Msa0310860 | 0.838831 | 2.276930e-57 | -8.615850e-47 |
| Msa0100740 | Msa0310860 | 0.809668 | 1.688447e-50 | -8.615850e-47 |
| Msa0103790 | Msa0310860 | 0.818626 | 1.777255e-52 | -8.615850e-47 |
| Msa0115190 | Msa0310860 | 0.801056 | 1.077888e-48 | -8.615850e-47 |
| Msa0115270 | Msa0310860 | 0.803758 | 2.991944e-49 | -8.615850e-47 |
| Msa0115370 | Msa0310860 | 0.806298 | 8.804035e-50 | -8.615850e-47 |
| Msa0115390 | Msa0310860 | 0.808008 | 3.823835e-50 | -8.615850e-47 |
| Msa0118540 | Msa0310860 | 0.862168 | 6.136083e-64 | -8.615850e-47 |
| Msa0118780 | Msa0310860 | 0.815941 | 7.141154e-52 | -8.615850e-47 |
| Msa0121820 | Msa0310860 | 0.846006 | 2.847418e-59 | -8.615850e-47 |
| Msa0121870 | Msa0310860 | 0.820951 | 5.229716e-53 | -8.615850e-47 |
| Msa0126880 | Msa0310860 | 0.813139 | 2.976738e-51 | -8.615850e-47 |
| Msa0140110 | Msa0310860 | 0.833131 | 6.360940e-56 | -8.615850e-47 |
| Msa0145010 | Msa0310860 | 0.835457 | 1.659464e-56 | -8.615850e-47 |
| Msa0150260 | Msa0310860 | 0.801788 | 7.632556e-49 | -8.615850e-47 |
| Msa0159420 | Msa0310860 | 0.809424 | 1.905290e-50 | -8.615850e-47 |
| Msa0162130 | Msa0310860 | 0.847522 | 1.096447e-59 | -8.615850e-47 |
| Msa0166750 | Msa0310860 | 0.804105 | 2.533740e-49 | -8.615850e-47 |
| Msa0169300 | Msa0310860 | 0.831883 | 1.296923e-55 | -8.615850e-47 |
| Msa0173070 | Msa0310860 | 0.804282 | 2.328419e-49 | -8.615850e-47 |
| Msa0177300 | Msa0310860 | 0.800735 | 1.253851e-48 | -8.615850e-47 |
| Msa0183850 | Msa0310860 | 0.801190 | 1.012211e-48 | -8.615850e-47 |
| Msa0183870 | Msa0310860 | 0.833810 | 4.306921e-56 | -8.615850e-47 |
| Msa0189300 | Msa0310860 | 0.800566 | 1.357148e-48 | -8.615850e-47 |
| Msa0189520 | Msa0310860 | 0.862523 | 4.772092e-64 | -8.615850e-47 |
| Msa0190120 | Msa0310860 | 0.960433 | 1.495288e-118 | -8.615850e-47 |
| Msa0190250 | Msa0310860 | 0.803827 | 2.894817e-49 | -8.615850e-47 |
| Msa0194480 | Msa0310860 | 0.824231 | 9.026503e-54 | -8.615850e-47 |
| Msa0204960 | Msa0310860 | 0.800517 | 1.388680e-48 | -8.615850e-47 |
| Msa0207040 | Msa0310860 | -0.803943 | 2.738048e-49 | -8.615850e-47 |
| Msa0207670 | Msa0310860 | 0.839497 | 1.529293e-57 | -8.615850e-47 |
| Msa0207700 | Msa0310860 | 0.808908 | 2.458160e-50 | -8.615850e-47 |
| Msa0209080 | Msa0310860 | 0.807075 | 6.033584e-50 | -8.615850e-47 |
| Msa0209350 | Msa0310860 | 0.818673 | 1.733366e-52 | -8.615850e-47 |
| Msa0209500 | Msa0310860 | 0.813851 | 2.076217e-51 | -8.615850e-47 |
| Msa0229360 | Msa0310860 | 0.801672 | 8.062109e-49 | -8.615850e-47 |
| Msa0231100 | Msa0310860 | 0.803030 | 4.234784e-49 | -8.615850e-47 |
| Msa0231790 | Msa0310860 | 0.803263 | 3.789469e-49 | -8.615850e-47 |
| Msa0231980 | Msa0310860 | 0.803018 | 4.257678e-49 | -8.615850e-47 |
| Msa0232050 | Msa0310860 | 0.814116 | 1.814469e-51 | -8.615850e-47 |
| Msa0236270 | Msa0310860 | 0.804823 | 1.795157e-49 | -8.615850e-47 |
| Msa0244980 | Msa0310860 | 0.829106 | 6.198464e-55 | -8.615850e-47 |
| Msa0249580 | Msa0310860 | 0.814089 | 1.839609e-51 | -8.615850e-47 |
| Msa0256330 | Msa0310860 | 0.837496 | 5.023841e-57 | -8.615850e-47 |
| Msa0257490 | Msa0310860 | 0.811241 | 7.723734e-51 | -8.615850e-47 |
| Msa0261550 | Msa0310860 | 0.846033 | 2.800686e-59 | -8.615850e-47 |
| Msa0269470 | Msa0310860 | 0.817767 | 2.780371e-52 | -8.615850e-47 |
| Msa0271360 | Msa0310860 | 0.826911 | 2.091469e-54 | -8.615850e-47 |
| Msa0271890 | Msa0310860 | 0.996992 | 3.118789e-235 | -8.615850e-47 |
| Msa0281530 | Msa0310860 | 0.805615 | 1.225258e-49 | -8.615850e-47 |
| Msa0283420 | Msa0310860 | 0.810085 | 1.373353e-50 | -8.615850e-47 |
| Msa0284820 | Msa0310860 | 0.822027 | 2.949817e-53 | -8.615850e-47 |
| Msa0295330 | Msa0310860 | 0.836186 | 1.084226e-56 | -8.615850e-47 |
| Msa0296790 | Msa0310860 | 0.811517 | 6.728883e-51 | -8.615850e-47 |
| Msa0296920 | Msa0310860 | 0.813485 | 2.500025e-51 | -8.615850e-47 |
| Msa0304590 | Msa0310860 | 0.816442 | 5.519433e-52 | -8.615850e-47 |
| Msa0304660 | Msa0310860 | 0.822613 | 2.156951e-53 | -8.615850e-47 |
| Msa0309880 | Msa0310860 | 0.809254 | 2.072305e-50 | -8.615850e-47 |
| Msa0310860 | Msa0315850 | 0.808738 | 2.672820e-50 | -8.615850e-47 |
| Msa0310860 | Msa0321690 | 0.803571 | 3.271041e-49 | -8.615850e-47 |
| Msa0310860 | Msa0331700 | 0.817008 | 4.119151e-52 | -8.615850e-47 |
| Msa0310860 | Msa0335060 | 0.822321 | 2.521936e-53 | -8.615850e-47 |
| Msa0310860 | Msa0343850 | 0.837605 | 4.708668e-57 | -8.615850e-47 |
| Msa0310860 | Msa0345350 | 0.807945 | 3.944121e-50 | -8.615850e-47 |
| Msa0310860 | Msa0347610 | 0.800408 | 1.461930e-48 | -8.615850e-47 |
| Msa0310860 | Msa0358860 | 0.884467 | 1.869870e-71 | -8.615850e-47 |
| Msa0310860 | Msa0365700 | 0.810938 | 8.986979e-51 | -8.615850e-47 |
| Msa0310860 | Msa0365860 | 0.828376 | 9.307388e-55 | -8.615850e-47 |
| Msa0310860 | Msa0379260 | 0.814047 | 1.879112e-51 | -8.615850e-47 |
| Msa0310860 | Msa0380100 | 0.840062 | 1.090432e-57 | -8.615850e-47 |
| Msa0310860 | Msa0385500 | 0.808100 | 3.655332e-50 | -8.615850e-47 |
| Msa0310860 | Msa0386040 | 0.808811 | 2.578416e-50 | -8.615850e-47 |
| Msa0310860 | Msa0394340 | 0.806040 | 9.977967e-50 | -8.615850e-47 |
| Msa0310860 | Msa0403770 | 0.828925 | 6.853611e-55 | -8.615850e-47 |
| Msa0310860 | Msa0408390 | 0.823599 | 1.269917e-53 | -8.615850e-47 |
| Msa0310860 | Msa0412840 | 0.814623 | 1.402008e-51 | -8.615850e-47 |
| Msa0310860 | Msa0414800 | 0.806229 | 9.104881e-50 | -8.615850e-47 |
| Msa0310860 | Msa0415430 | 0.830743 | 2.473108e-55 | -8.615850e-47 |
| Msa0310860 | Msa0419520 | 0.807681 | 4.488726e-50 | -8.615850e-47 |
| Msa0310860 | Msa0436190 | 0.814633 | 1.394825e-51 | -8.615850e-47 |
| Msa0310860 | Msa0442200 | 0.811793 | 5.860842e-51 | -8.615850e-47 |
| Msa0310860 | Msa0443430 | 0.801158 | 1.027336e-48 | -8.615850e-47 |
| Msa0310860 | Msa0457510 | 0.833772 | 4.401625e-56 | -8.615850e-47 |
| Msa0310860 | Msa0458060 | 0.814768 | 1.302181e-51 | -8.615850e-47 |
| Msa0310860 | Msa0463340 | 0.812679 | 3.754340e-51 | -8.615850e-47 |
| Msa0310860 | Msa0467220 | 0.814966 | 1.177148e-51 | -8.615850e-47 |
| Msa0310860 | Msa0469620 | -0.832288 | 1.029591e-55 | -8.615850e-47 |
| Msa0310860 | Msa0482940 | 0.816364 | 5.746054e-52 | -8.615850e-47 |
| Msa0310860 | Msa0484740 | 0.807530 | 4.832948e-50 | -8.615850e-47 |
| Msa0310860 | Msa0485850 | 0.824866 | 6.398443e-54 | -8.615850e-47 |
| Msa0310860 | Msa0496450 | 0.830058 | 3.635418e-55 | -8.615850e-47 |
| Msa0310860 | Msa0510840 | 0.817958 | 2.516955e-52 | -8.615850e-47 |
| Msa0310860 | Msa0520790 | 0.820008 | 8.604237e-53 | -8.615850e-47 |
| Msa0310860 | Msa0524600 | 0.845981 | 2.892679e-59 | -8.615850e-47 |
| Msa0310860 | Msa0534410 | 0.809660 | 1.695037e-50 | -8.615850e-47 |
| Msa0310860 | Msa0534900 | 0.859922 | 2.956595e-63 | -8.615850e-47 |
| Msa0310860 | Msa0542290 | 0.820584 | 6.350491e-53 | -8.615850e-47 |
| Msa0310860 | Msa0542560 | 0.829036 | 6.442775e-55 | -8.615850e-47 |
| Msa0310860 | Msa0544840 | 0.833631 | 4.773728e-56 | -8.615850e-47 |
| Msa0310860 | Msa0547160 | 0.826888 | 2.118921e-54 | -8.615850e-47 |
| Msa0310860 | Msa0549780 | 0.808475 | 3.040537e-50 | -8.615850e-47 |
| Msa0310860 | Msa0553220 | -0.804989 | 1.657127e-49 | -8.615850e-47 |
| Msa0310860 | Msa0557480 | 0.800414 | 1.457212e-48 | -8.615850e-47 |
| Msa0310860 | Msa0574060 | -0.802279 | 6.049144e-49 | -8.615850e-47 |
| Msa0310860 | Msa0581110 | 0.804405 | 2.194564e-49 | -8.615850e-47 |
| Msa0310860 | Msa0581130 | 0.810016 | 1.420991e-50 | -8.615850e-47 |
| Msa0310860 | Msa0588240 | 0.804569 | 2.028480e-49 | -8.615850e-47 |
| Msa0310860 | Msa0588260 | 0.831145 | 1.970926e-55 | -8.615850e-47 |
| Msa0310860 | Msa0590650 | 0.819009 | 1.454064e-52 | -8.615850e-47 |
| Msa0310860 | Msa0591710 | 0.809843 | 1.548259e-50 | -8.615850e-47 |
| Msa0310860 | Msa0600080 | 0.822577 | 2.199027e-53 | -8.615850e-47 |
| Msa0310860 | Msa0600450 | 0.817985 | 2.482557e-52 | -8.615850e-47 |
| Msa0310860 | Msa0602370 | 0.835531 | 1.589282e-56 | -8.615850e-47 |
| Msa0310860 | Msa0603570 | 0.819545 | 1.097927e-52 | -8.615850e-47 |
| Msa0310860 | Msa0604290 | 0.810575 | 1.076649e-50 | -8.615850e-47 |
| Msa0310860 | Msa0609220 | 0.842807 | 2.063370e-58 | -8.615850e-47 |
| Msa0310860 | Msa0612720 | 0.805901 | 1.067032e-49 | -8.615850e-47 |
| Msa0310860 | Msa0615680 | 0.809296 | 2.029285e-50 | -8.615850e-47 |
| Msa0310860 | Msa0626940 | 0.814411 | 1.561577e-51 | -8.615850e-47 |
| Msa0310860 | Msa0631350 | 0.860704 | 1.715749e-63 | -8.615850e-47 |
| Msa0310860 | Msa0640940 | 0.809638 | 1.713891e-50 | -8.615850e-47 |
| Msa0310860 | Msa0642970 | 0.816754 | 4.697967e-52 | -8.615850e-47 |
| Msa0310860 | Msa0643320 | 0.832394 | 9.693226e-56 | -8.615850e-47 |
| Msa0310860 | Msa0649220 | 0.800269 | 1.559981e-48 | -8.615850e-47 |
| Msa0310860 | Msa0651930 | 0.802765 | 4.802564e-49 | -8.615850e-47 |
| Msa0310860 | Msa0661710 | 0.813398 | 2.612442e-51 | -8.615850e-47 |
| Msa0310860 | Msa0662630 | 0.825087 | 5.676342e-54 | -8.615850e-47 |
| Msa0310860 | Msa0665080 | 0.806949 | 6.415396e-50 | -8.615850e-47 |
| Msa0310860 | Msa0669720 | 0.840015 | 1.121179e-57 | -8.615850e-47 |
| Msa0310860 | Msa0669760 | 0.818132 | 2.299160e-52 | -8.615850e-47 |
| Msa0310860 | Msa0679360 | 0.819338 | 1.223686e-52 | -8.615850e-47 |
| Msa0310860 | Msa0682680 | 0.856320 | 3.484409e-62 | -8.615850e-47 |
| Msa0310860 | Msa0683140 | 0.832044 | 1.183302e-55 | -8.615850e-47 |
| Msa0310860 | Msa0683600 | 0.840982 | 6.261606e-58 | -8.615850e-47 |
| Msa0310860 | Msa0693060 | 0.805816 | 1.112183e-49 | -8.615850e-47 |
| Msa0310860 | Msa0698540 | 0.816471 | 5.437629e-52 | -8.615850e-47 |
| Msa0310860 | Msa0705820 | 0.811244 | 7.714022e-51 | -8.615850e-47 |
| Msa0310860 | Msa0705990 | 0.808082 | 3.688793e-50 | -8.615850e-47 |
| Msa0310860 | Msa0706960 | 0.804778 | 1.834734e-49 | -8.615850e-47 |
| Msa0310860 | Msa0709160 | 0.806325 | 8.688012e-50 | -8.615850e-47 |
| Msa0310860 | Msa0721280 | 0.801313 | 9.548471e-49 | -8.615850e-47 |
| Msa0310860 | Msa0748170 | 0.841577 | 4.367735e-58 | -8.615850e-47 |
| Msa0310860 | Msa0751010 | 0.811574 | 6.540724e-51 | -8.615850e-47 |
| Msa0310860 | Msa0754930 | 0.803415 | 3.524861e-49 | -8.615850e-47 |
| Msa0310860 | Msa0756550 | 0.800142 | 1.655517e-48 | -8.615850e-47 |
| Msa0310860 | Msa0760350 | 0.802147 | 6.440404e-49 | -8.615850e-47 |
| Msa0310860 | Msa0765180 | 0.800090 | 1.696336e-48 | -8.615850e-47 |
| Msa0310860 | Msa0769980 | 0.809709 | 1.654449e-50 | -8.615850e-47 |
| Msa0310860 | Msa0784860 | 0.804183 | 2.440991e-49 | -8.615850e-47 |
| Msa0310860 | Msa0788540 | 0.811673 | 6.224234e-51 | -8.615850e-47 |
| Msa0310860 | Msa0793380 | 0.836184 | 1.085543e-56 | -8.615850e-47 |
| Msa0310860 | Msa0794050 | 0.825515 | 4.495139e-54 | -8.615850e-47 |
| Msa0310860 | Msa0798440 | 0.802175 | 6.356096e-49 | -8.615850e-47 |
| Msa0310860 | Msa0799340 | 0.812886 | 3.383447e-51 | -8.615850e-47 |
| Msa0310860 | Msa0800370 | 0.837427 | 5.232375e-57 | -8.615850e-47 |
| Msa0310860 | Msa0801110 | 0.801041 | 1.085630e-48 | -8.615850e-47 |
| Msa0310860 | Msa0801730 | 0.816340 | 5.815487e-52 | -8.615850e-47 |
| Msa0310860 | Msa0833190 | -0.806219 | 9.149478e-50 | -8.615850e-47 |
| Msa0310860 | Msa0834330 | 0.814529 | 1.470881e-51 | -8.615850e-47 |
| Msa0310860 | Msa0837420 | -0.805680 | 1.187804e-49 | -8.615850e-47 |
| Msa0310860 | Msa0846230 | 0.800125 | 1.668559e-48 | -8.615850e-47 |
| Msa0310860 | Msa0849030 | 0.819867 | 9.270799e-53 | -8.615850e-47 |
| Msa0310860 | Msa0860900 | -0.807438 | 5.054975e-50 | -8.615850e-47 |
| Msa0310860 | Msa0861470 | 0.805016 | 1.636156e-49 | -8.615850e-47 |
| Msa0310860 | Msa0861570 | 0.813744 | 2.192073e-51 | -8.615850e-47 |
| Msa0310860 | Msa0867520 | -0.807943 | 3.948523e-50 | -8.615850e-47 |
| Msa0310860 | Msa0877710 | 0.803074 | 4.146830e-49 | -8.615850e-47 |
| Msa0310860 | Msa0879860 | 0.846850 | 1.676095e-59 | -8.615850e-47 |
| Msa0310860 | Msa0887250 | 0.824740 | 6.851728e-54 | -8.615850e-47 |
| Msa0310860 | Msa0899240 | -0.805127 | 1.551094e-49 | -8.615850e-47 |
| Msa0310860 | Msa0923780 | 0.814156 | 1.778550e-51 | -8.615850e-47 |
| Msa0310860 | Msa0932570 | 0.809083 | 2.254941e-50 | -8.615850e-47 |
| Msa0310860 | Msa0933380 | 0.846335 | 2.316791e-59 | -8.615850e-47 |
| Msa0310860 | Msa0943270 | 0.814824 | 1.265660e-51 | -8.615850e-47 |
| Msa0310860 | Msa0944200 | 0.829754 | 4.312328e-55 | -8.615850e-47 |
| Msa0310860 | Msa0944610 | 0.826470 | 2.665830e-54 | -8.615850e-47 |
| Msa0310860 | Msa0947800 | 0.833219 | 6.047423e-56 | -8.615850e-47 |
| Msa0310860 | Msa0963090 | -0.808031 | 3.781587e-50 | -8.615850e-47 |
| Msa0310860 | Msa0970530 | 0.818423 | 1.975711e-52 | -8.615850e-47 |
| Msa0310860 | Msa0970600 | 0.822764 | 1.989180e-53 | -8.615850e-47 |
| Msa0310860 | Msa0971160 | 0.831585 | 1.535391e-55 | -8.615850e-47 |
| Msa0310860 | Msa0974810 | 0.808344 | 3.244008e-50 | -8.615850e-47 |
| Msa0310860 | Msa0974950 | 0.840524 | 8.257319e-58 | -8.615850e-47 |
| Msa0310860 | Msa0993240 | 0.818747 | 1.667927e-52 | -8.615850e-47 |
| Msa0310860 | Msa0994370 | 0.835812 | 1.349408e-56 | -8.615850e-47 |
| Msa0310860 | Msa0999050 | -0.821814 | 3.304979e-53 | -8.615850e-47 |
| Msa0310860 | Msa1002600 | -0.807482 | 4.947294e-50 | -8.615850e-47 |
| Msa0310860 | Msa1006910 | -0.803114 | 4.067996e-49 | -8.615850e-47 |
| Msa0310860 | Msa1023180 | 0.803405 | 3.541189e-49 | -8.615850e-47 |
| Msa0310860 | Msa1029050 | 0.813820 | 2.109649e-51 | -8.615850e-47 |
| Msa0310860 | Msa1029080 | -0.820966 | 5.187993e-53 | -8.615850e-47 |
| Msa0310860 | Msa1042660 | 0.803348 | 3.638232e-49 | -8.615850e-47 |
| Msa0310860 | Msa1043050 | 0.808495 | 3.012222e-50 | -8.615850e-47 |
| Msa0310860 | Msa1054150 | -0.817346 | 3.458684e-52 | -8.615850e-47 |
| Msa0310860 | Msa1063510 | 0.811199 | 7.887357e-51 | -8.615850e-47 |
| Msa0310860 | Msa1071320 | 0.818739 | 1.675039e-52 | -8.615850e-47 |
| Msa0310860 | Msa1081790 | -0.825689 | 4.088355e-54 | -8.615850e-47 |
| Msa0310860 | Msa1081930 | 0.806343 | 8.612458e-50 | -8.615850e-47 |
| Msa0310860 | Msa1088290 | 0.817749 | 2.805962e-52 | -8.615850e-47 |
| Msa0310860 | Msa1091100 | 0.808755 | 2.649725e-50 | -8.615850e-47 |
| Msa0310860 | Msa1094430 | 0.830797 | 2.398318e-55 | -8.615850e-47 |
| Msa0310860 | Msa1107160 | 0.816667 | 4.912892e-52 | -8.615850e-47 |
| Msa0310860 | Msa1120810 | 0.800744 | 1.248446e-48 | -8.615850e-47 |
| Msa0310860 | Msa1125790 | -0.817672 | 2.920205e-52 | -8.615850e-47 |
| Msa0310860 | Msa1126830 | 0.805728 | 1.160635e-49 | -8.615850e-47 |
| Msa0310860 | Msa1128990 | 0.800922 | 1.147975e-48 | -8.615850e-47 |
| Msa0310860 | Msa1133230 | 0.832201 | 1.081855e-55 | -8.615850e-47 |
| Msa0310860 | Msa1133250 | 0.829786 | 4.236875e-55 | -8.615850e-47 |
| Msa0310860 | Msa1134090 | 0.811050 | 8.498319e-51 | -8.615850e-47 |
| Msa0310860 | Msa1140150 | 0.810640 | 1.042275e-50 | -8.615850e-47 |
| Msa0310860 | Msa1140230 | 0.803134 | 4.028907e-49 | -8.615850e-47 |
| Msa0310860 | Msa1150710 | 0.816491 | 5.381430e-52 | -8.615850e-47 |
| Msa0310860 | Msa1156170 | -0.814357 | 1.605224e-51 | -8.615850e-47 |
| Msa0310860 | Msa1158640 | -0.820249 | 7.578599e-53 | -8.615850e-47 |
| Msa0310860 | Msa1165780 | 0.830310 | 3.156826e-55 | -8.615850e-47 |
| Msa0310860 | Msa1165960 | 0.811502 | 6.781579e-51 | -8.615850e-47 |
| Msa0310860 | Msa1166090 | -0.833720 | 4.534391e-56 | -8.615850e-47 |
| Msa0310860 | Msa1200320 | 0.866535 | 2.655281e-65 | -8.615850e-47 |
| Msa0310860 | Msa1205590 | 0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa0310860 | Msa1208380 | 0.834024 | 3.807097e-56 | -8.615850e-47 |
| Msa0310860 | Msa1217650 | -0.803052 | 4.189323e-49 | -8.615850e-47 |
| Msa0310860 | Msa1233850 | 0.811241 | 7.723734e-51 | -8.615850e-47 |
| Msa0310860 | Msa1242920 | -0.815943 | 7.134566e-52 | -8.615850e-47 |
| Msa0310860 | Msa1253800 | 0.812580 | 3.946668e-51 | -8.615850e-47 |
| Msa0310860 | Msa1254730 | 0.820758 | 5.790868e-53 | -8.615850e-47 |
| Msa0310860 | Msa1260130 | 0.807666 | 4.522028e-50 | -8.615850e-47 |
| Msa0310860 | Msa1267260 | 0.800549 | 1.368310e-48 | -8.615850e-47 |
| Msa0310860 | Msa1270660 | 0.807803 | 4.229436e-50 | -8.615850e-47 |
| Msa0310860 | Msa1295330 | 0.812856 | 3.434509e-51 | -8.615850e-47 |
| Msa0310860 | Msa1296830 | 0.846815 | 1.713739e-59 | -8.615850e-47 |
| Msa0310860 | Msa1303580 | 0.817914 | 2.575335e-52 | -8.615850e-47 |
| Msa0310860 | Msa1316360 | 0.801163 | 1.024901e-48 | -8.615850e-47 |
| Msa0310860 | Msa1336560 | 0.837623 | 4.659406e-57 | -8.615850e-47 |
| Msa0310860 | Msa1337170 | 0.824109 | 9.642398e-54 | -8.615850e-47 |
| Msa0310860 | Msa1344660 | 0.809058 | 2.283125e-50 | -8.615850e-47 |
| Msa0310860 | Msa1345220 | 0.805919 | 1.058164e-49 | -8.615850e-47 |
| Msa0310860 | Msa1348850 | 0.805384 | 1.370096e-49 | -8.615850e-47 |
| Msa0310860 | Msa1351540 | 0.826358 | 2.833999e-54 | -8.615850e-47 |
| Msa0310860 | Msa1357890 | 0.804449 | 2.148935e-49 | -8.615850e-47 |
| Msa0310860 | Msa1359270 | 0.800271 | 1.558464e-48 | -8.615850e-47 |
| Msa0310860 | Msa1359630 | 0.813254 | 2.809215e-51 | -8.615850e-47 |
| Msa0310860 | Msa1360140 | 0.809352 | 1.973991e-50 | -8.615850e-47 |
| Msa0310860 | Msa1362420 | 0.807501 | 4.901841e-50 | -8.615850e-47 |
| Msa0310860 | Msa1365800 | 0.804803 | 1.812856e-49 | -8.615850e-47 |
| Msa0310860 | Msa1367490 | 0.800010 | 1.761554e-48 | -8.615850e-47 |
| Msa0310860 | Msa1368530 | 0.816261 | 6.056747e-52 | -8.615850e-47 |
| Msa0310860 | Msa1370340 | 0.807196 | 5.688198e-50 | -8.615850e-47 |
| Msa0310860 | Msa1370590 | 0.818981 | 1.475997e-52 | -8.615850e-47 |
| Msa0310860 | Msa1371090 | 0.808154 | 3.559533e-50 | -8.615850e-47 |
| Msa0310860 | Msa1381650 | 0.821959 | 3.058799e-53 | -8.615850e-47 |
| Msa0310860 | Msa1384100 | 0.816939 | 4.269374e-52 | -8.615850e-47 |
| Msa0310860 | Msa1396400 | -0.829915 | 3.939534e-55 | -8.615850e-47 |
| Msa0310860 | Msa1403340 | 0.819749 | 9.862613e-53 | -8.615850e-47 |
| Msa0310860 | Msa1407970 | 0.814406 | 1.565587e-51 | -8.615850e-47 |
| Msa0310860 | Msa1417570 | 0.800051 | 1.727623e-48 | -8.615850e-47 |
| Msa0310860 | Msa1419870 | 0.801608 | 8.311411e-49 | -8.615850e-47 |
| Msa0310860 | Msa1420990 | 0.822131 | 2.791621e-53 | -8.615850e-47 |
| Msa0310860 | Msa1422810 | 0.841390 | 4.891313e-58 | -8.615850e-47 |
| Msa0310860 | Msa1428780 | 0.804339 | 2.265023e-49 | -8.615850e-47 |
| Msa0310860 | Msa1428880 | 0.809215 | 2.112491e-50 | -8.615850e-47 |
| Msa0310860 | Msa1436520 | 0.841847 | 3.705706e-58 | -8.615850e-47 |
| Msa0310860 | Msa1438840 | 0.831545 | 1.570896e-55 | -8.615850e-47 |
| Msa0310860 | Msa1444120 | 0.809670 | 1.687395e-50 | -8.615850e-47 |
| Msa0310860 | Msa1447890 | 0.801889 | 7.277465e-49 | -8.615850e-47 |
| Msa0310860 | Msa1454450 | 0.817919 | 2.568696e-52 | -8.615850e-47 |
| Msa0310860 | Msa1454680 | 0.818871 | 1.563112e-52 | -8.615850e-47 |
| Msa0310860 | Msa1458810 | 0.814003 | 1.921659e-51 | -8.615850e-47 |
| Msa0310860 | Msa1459960 | 0.807082 | 6.013577e-50 | -8.615850e-47 |
| Msa0310860 | Msa1460320 | -0.825681 | 4.105259e-54 | -8.615850e-47 |
| Msa0310860 | Msa1462720 | 0.803941 | 2.741746e-49 | -8.615850e-47 |
| Msa0310860 | Msa1465960 | 0.827644 | 1.396468e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0310860 | MtrunA17_Chr2g0279631 | 89.944 | 179 | 11 | 1 | 1 | 172 | 1 | 179 | 1.70e-111 | 316 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0310860 | AT4G33625.1 | 67.598 | 179 | 56 | 1 | 4 | 180 | 5 | 183 | 6.90e-88 | 256 |
| Msa0310860 | AT4G33625.2 | 66.854 | 178 | 57 | 1 | 4 | 179 | 5 | 182 | 2.05e-85 | 250 |
| Msa0310860 | AT4G33625.3 | 67.586 | 145 | 45 | 1 | 4 | 146 | 5 | 149 | 4.27e-68 | 206 |
Find 66 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATATCTAAAGGCGATAT+TGG | 0.249737 | 2_4:-5661780 | Msa0310860:three_prime_UTR |
| CATACGAAATGACTGGTAAA+TGG | 0.263245 | 2_4:+5661744 | None:intergenic |
| GTAACCAACACTAACATAAA+AGG | 0.301548 | 2_4:+5661851 | None:intergenic |
| AAATATCTAAAGGCGATATT+GGG | 0.318111 | 2_4:-5661779 | Msa0310860:three_prime_UTR |
| CTCTAGTGATCTCTTGCTTC+TGG | 0.322823 | 2_4:+5662587 | None:intergenic |
| GTAAAAGAAGGCCTTTGTTT+TGG | 0.339976 | 2_4:+5661673 | None:intergenic |
| CTCTTGTGAACAAAATTAGA+AGG | 0.372460 | 2_4:-5661519 | Msa0310860:three_prime_UTR |
| TTCTCGAGTATTGGGCAGGC+AGG | 0.377149 | 2_4:-5663892 | Msa0310860:CDS |
| AGAGCTTTCCCTGGCTATAG+TGG | 0.408839 | 2_4:-5663258 | Msa0310860:CDS |
| TAGAGAATGAACAAACGATA+TGG | 0.408890 | 2_4:+5661829 | None:intergenic |
| TGGCGTAGTTTACGTTATCT+TGG | 0.420109 | 2_4:-5663178 | Msa0310860:intron |
| ATACGAAATGACTGGTAAAT+GGG | 0.430779 | 2_4:+5661745 | None:intergenic |
| ACTCGACTCGTAGGTAGAAC+TGG | 0.465302 | 2_4:+5664317 | None:intergenic |
| TTCTCTTCATCTTCCTCTCT+AGG | 0.465361 | 2_4:+5664350 | None:intergenic |
| TGCTATTTGCTTCTTTCTTG+TGG | 0.467457 | 2_4:-5663198 | Msa0310860:CDS |
| CTAACATAAAAGGCATTCAT+AGG | 0.469430 | 2_4:+5661861 | None:intergenic |
| GCAACTGCTTGTGACAGAAT+AGG | 0.469735 | 2_4:-5661961 | Msa0310860:exon |
| GCTGAAATTGTCTAATTACT+TGG | 0.480632 | 2_4:-5661917 | Msa0310860:three_prime_UTR |
| TTTCGCTCCCCACTATAGCC+AGG | 0.487874 | 2_4:+5663249 | None:intergenic |
| AACAGCAGAGAGAACGTTAA+CGG | 0.491540 | 2_4:+5664214 | None:intergenic |
| TTTCTTAGTTAGGGAGGAGG+AGG | 0.502472 | 2_4:+5664485 | None:intergenic |
| TGGTTCTCGTTGAGACTGAA+TGG | 0.505524 | 2_4:-5664016 | Msa0310860:CDS |
| CTCGAGTATTGGGCAGGCAG+GGG | 0.509030 | 2_4:-5663890 | Msa0310860:CDS |
| ATCTTTCTTAGTTAGGGAGG+AGG | 0.514598 | 2_4:+5664482 | None:intergenic |
| TCTCGAGTATTGGGCAGGCA+GGG | 0.517138 | 2_4:-5663891 | Msa0310860:CDS |
| TATTCTGTGTAAATATCTAA+AGG | 0.522284 | 2_4:-5661789 | Msa0310860:three_prime_UTR |
| TTGTTCACAAGAGAGGTATG+AGG | 0.531108 | 2_4:+5661529 | None:intergenic |
| CTGTTGAAGTTGATCGAGGA+TGG | 0.532789 | 2_4:-5661574 | Msa0310860:three_prime_UTR |
| ATAAAAGGCATTCATAGGCC+AGG | 0.534215 | 2_4:+5661866 | None:intergenic |
| GTTGAAGTTGATCGAGGATG+GGG | 0.534278 | 2_4:-5661572 | Msa0310860:three_prime_UTR |
| GAGCTTTCCCTGGCTATAGT+GGG | 0.535147 | 2_4:-5663257 | Msa0310860:CDS |
| ACACATCACCTCAAGATCCT+TGG | 0.539361 | 2_4:+5662555 | None:intergenic |
| TGAAACATCTACAAACTATG+AGG | 0.542229 | 2_4:+5664273 | None:intergenic |
| CAGGTTCTCGAGTATTGGGC+AGG | 0.543908 | 2_4:-5663896 | Msa0310860:CDS |
| TGTTGAAGTTGATCGAGGAT+GGG | 0.548109 | 2_4:-5661573 | Msa0310860:three_prime_UTR |
| ATTGTCTAATTACTTGGTGA+AGG | 0.551948 | 2_4:-5661911 | Msa0310860:three_prime_UTR |
| TTGAAGGGAGTCCTTTGCGT+TGG | 0.558019 | 2_4:-5662628 | Msa0310860:intron |
| TCTATCTTTCTTAGTTAGGG+AGG | 0.559313 | 2_4:+5664479 | None:intergenic |
| CACTAGAGAGCAAGCAACCA+AGG | 0.560997 | 2_4:-5662572 | Msa0310860:CDS |
| CTTCGTTCAACTCGACTCGT+AGG | 0.565568 | 2_4:+5664308 | None:intergenic |
| ACTATAGCCAGGGAAAGCTC+TGG | 0.578804 | 2_4:+5663260 | None:intergenic |
| TTCGCTCCCCACTATAGCCA+GGG | 0.578838 | 2_4:+5663250 | None:intergenic |
| GTGATGACCAGAGCTTTCCC+TGG | 0.579648 | 2_4:-5663267 | Msa0310860:CDS |
| ACAAGAGAGGTATGAGGACG+AGG | 0.583020 | 2_4:+5661535 | None:intergenic |
| CATCTACAAACTATGAGGAA+AGG | 0.595696 | 2_4:+5664278 | None:intergenic |
| AAGGCTGAAGAGACGACTAA+AGG | 0.596101 | 2_4:-5661892 | Msa0310860:three_prime_UTR |
| GCAAGCAACCAAGGATCTTG+AGG | 0.600033 | 2_4:-5662563 | Msa0310860:intron |
| TTGTAGAGGCTCAAAACAGT+GGG | 0.610510 | 2_4:+5661718 | None:intergenic |
| GCAGAGAATAGCAGCTAAAG+CGG | 0.612889 | 2_4:+5664241 | None:intergenic |
| AGGTTATTGACTTATTGTAG+AGG | 0.614079 | 2_4:+5661704 | None:intergenic |
| TGGGAGGCATACGAAATGAC+TGG | 0.615864 | 2_4:+5661737 | None:intergenic |
| AGCTTTCCCTGGCTATAGTG+GGG | 0.618131 | 2_4:-5663256 | Msa0310860:CDS |
| AATATCTAAAGGCGATATTG+GGG | 0.619302 | 2_4:-5661778 | Msa0310860:three_prime_UTR |
| AGAGACGACTAAAGGAAACC+TGG | 0.622315 | 2_4:-5661884 | Msa0310860:three_prime_UTR |
| TTCTTAGTTAGGGAGGAGGA+GGG | 0.626053 | 2_4:+5664486 | None:intergenic |
| CCTCTCCACACCCAAAACAA+AGG | 0.631992 | 2_4:-5661684 | Msa0310860:three_prime_UTR |
| AGAGAGGAAGATGAAGAGAA+CGG | 0.638221 | 2_4:-5664347 | Msa0310860:CDS |
| AGACGTGAAGATGCCTAGAG+AGG | 0.640729 | 2_4:-5664363 | Msa0310860:exon |
| ATTGTAGAGGCTCAAAACAG+TGG | 0.644746 | 2_4:+5661717 | None:intergenic |
| TACGAAATGACTGGTAAATG+GGG | 0.646417 | 2_4:+5661746 | None:intergenic |
| TAGAGGCTCAAAACAGTGGG+AGG | 0.648160 | 2_4:+5661721 | None:intergenic |
| CTTCAACAGTTCAACGACGT+GGG | 0.652621 | 2_4:+5661588 | None:intergenic |
| ACGAAATGACTGGTAAATGG+GGG | 0.678205 | 2_4:+5661747 | None:intergenic |
| ACTTCAACAGTTCAACGACG+TGG | 0.681043 | 2_4:+5661587 | None:intergenic |
| TGAACTGTTGAAGTTGATCG+AGG | 0.699251 | 2_4:-5661578 | Msa0310860:three_prime_UTR |
| GAGGAAGATGAAGAGAACGG+TGG | 0.701747 | 2_4:-5664344 | Msa0310860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATACTTTAGAAATTAAAT+TGG | - | chr2_4:5662378-5662397 | Msa0310860:intron | 10.0% |
| !!! | AAATCTAAAACAAAAAACAA+TGG | + | chr2_4:5661914-5661933 | None:intergenic | 15.0% |
| !!! | TTCATAATCATGTTTTTTAA+TGG | - | chr2_4:5662189-5662208 | Msa0310860:intron | 15.0% |
| !! | CTAACTTTAATATGATATAA+AGG | + | chr2_4:5662241-5662260 | None:intergenic | 15.0% |
| !! | TAGGAGATTAAATTAAATTA+AGG | - | chr2_4:5662414-5662433 | Msa0310860:intron | 15.0% |
| !! | AGGAGATTAAATTAAATTAA+GGG | - | chr2_4:5662415-5662434 | Msa0310860:intron | 15.0% |
| !! | CTATCATATAGTATTATTTA+AGG | + | chr2_4:5662535-5662554 | None:intergenic | 15.0% |
| !!! | TATTGATTTTTCACATTATT+GGG | - | chr2_4:5663022-5663041 | Msa0310860:intron | 15.0% |
| !! | ATTATTAGTTAAAGAAATGA+AGG | - | chr2_4:5663706-5663725 | Msa0310860:intron | 15.0% |
| !!! | ATTTTTTATGATGTAAAAGA+AGG | + | chr2_4:5664337-5664356 | None:intergenic | 15.0% |
| !!! | TTTTCTATCTTTCTTAGTTA+GGG | + | chr2_4:5661522-5661541 | None:intergenic | 20.0% |
| !!! | ATTTTCTATCTTTCTTAGTT+AGG | + | chr2_4:5661523-5661542 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTAGATTTTCGA+TGG | - | chr2_4:5661918-5661937 | Msa0310860:three_prime_UTR | 20.0% |
| !!! | ATTAATTTTCTTGCATTTTC+AGG | - | chr2_4:5662080-5662099 | Msa0310860:intron | 20.0% |
| !!! | TTTCTAGTATTATCAAACAA+GGG | + | chr2_4:5662911-5662930 | None:intergenic | 20.0% |
| !!! | TCATATTTTGACTAACATTT+TGG | + | chr2_4:5662934-5662953 | None:intergenic | 20.0% |
| !!! | ATACAAACATCAAATTGTTT+TGG | + | chr2_4:5662971-5662990 | None:intergenic | 20.0% |
| !!! | CTATTGATTTTTCACATTAT+TGG | - | chr2_4:5663021-5663040 | Msa0310860:intron | 20.0% |
| !!! | ATTTCTAAAGTATTAAACTC+AGG | + | chr2_4:5663061-5663080 | None:intergenic | 20.0% |
| !!! | AAATGGTTTCATTTAAGTTT+GGG | + | chr2_4:5663084-5663103 | None:intergenic | 20.0% |
| !!! | ATTCTTTAGAACATAAATTG+AGG | + | chr2_4:5663292-5663311 | None:intergenic | 20.0% |
| !! | CAACAAATTAACTAAATTTG+CGG | + | chr2_4:5663565-5663584 | None:intergenic | 20.0% |
| !! | CAACAAATTAATATCAGTAA+CGG | + | chr2_4:5663596-5663615 | None:intergenic | 20.0% |
| !! | GAAATTGCAACAATAAAATT+TGG | + | chr2_4:5663661-5663680 | None:intergenic | 20.0% |
| !! | TATTCTGTGTAAATATCTAA+AGG | - | chr2_4:5664206-5664225 | Msa0310860:CDS | 20.0% |
| !!! | TACAGTATTTGTGTTTTTGA+AGG | + | chr2_4:5661811-5661830 | None:intergenic | 25.0% |
| ! | CAATTTATTCCTTCATTCAT+CGG | - | chr2_4:5661873-5661892 | Msa0310860:three_prime_UTR | 25.0% |
| !!! | CTTCATAATTAAGTTTTGTC+AGG | - | chr2_4:5662004-5662023 | Msa0310860:intron | 25.0% |
| ! | TTTCCTTCATTTCATTTCTT+AGG | - | chr2_4:5662035-5662054 | Msa0310860:intron | 25.0% |
| ! | TTGTTACATGTAATTGTGTT+TGG | - | chr2_4:5662164-5662183 | Msa0310860:intron | 25.0% |
| !!! | GAGTTTTTGTTTTGTTTTGA+GGG | + | chr2_4:5662289-5662308 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTGTTTTGTTTTG+AGG | + | chr2_4:5662290-5662309 | None:intergenic | 25.0% |
| ! | AATTGGAGATTATGATACTT+AGG | - | chr2_4:5662395-5662414 | Msa0310860:intron | 25.0% |
| !!! | AGACTATAGTTTGCTTTATT+TGG | + | chr2_4:5662851-5662870 | None:intergenic | 25.0% |
| !! | TATTATCAAACAAGGGTTTT+GGG | + | chr2_4:5662904-5662923 | None:intergenic | 25.0% |
| !!! | GTTTCTAGTATTATCAAACA+AGG | + | chr2_4:5662912-5662931 | None:intergenic | 25.0% |
| !! | GAAATGGTTTCATTTAAGTT+TGG | + | chr2_4:5663085-5663104 | None:intergenic | 25.0% |
| !! | TGAAATTTTCAAAGCGAATA+TGG | + | chr2_4:5663134-5663153 | None:intergenic | 25.0% |
| !! | TTGTTTGTATTGTCATTTGA+AGG | - | chr2_4:5663351-5663370 | Msa0310860:intron | 25.0% |
| !! | TGTTTGTATTGTCATTTGAA+GGG | - | chr2_4:5663352-5663371 | Msa0310860:intron | 25.0% |
| ! | ATATAATCAGATCATGTAGT+TGG | + | chr2_4:5663622-5663641 | None:intergenic | 25.0% |
| ! | TGCAATTTCAAATCAAATGT+TGG | - | chr2_4:5663672-5663691 | Msa0310860:intron | 25.0% |
| ! | ACAGATAGCAATAATCATAT+GGG | + | chr2_4:5663753-5663772 | None:intergenic | 25.0% |
| ! | TACAGATAGCAATAATCATA+TGG | + | chr2_4:5663754-5663773 | None:intergenic | 25.0% |
| ! | TAGAATAAACTTTGACACTT+AGG | + | chr2_4:5663903-5663922 | None:intergenic | 25.0% |
| ! | ACTTCTTTAGCAAAAGTTTA+TGG | + | chr2_4:5663959-5663978 | None:intergenic | 25.0% |
| ! | TAAATATCTAAAGGCGATAT+TGG | - | chr2_4:5664215-5664234 | Msa0310860:CDS | 25.0% |
| ! | AAATATCTAAAGGCGATATT+GGG | - | chr2_4:5664216-5664235 | Msa0310860:CDS | 25.0% |
| TGAAACATCTACAAACTATG+AGG | + | chr2_4:5661725-5661744 | None:intergenic | 30.0% | |
| AATTGCGAAAAGAAGAAAGA+AGG | + | chr2_4:5661858-5661877 | None:intergenic | 30.0% | |
| GATCCTAAGAAATGAAATGA+AGG | + | chr2_4:5662041-5662060 | None:intergenic | 30.0% | |
| !!! | TTTTGTTTTGTTTTGAGGGA+AGG | + | chr2_4:5662285-5662304 | None:intergenic | 30.0% |
| !! | AGTTTTTCAACTCGAAACTT+AGG | - | chr2_4:5662462-5662481 | Msa0310860:intron | 30.0% |
| !!! | GTTTTGTTTCTTACTGAGTT+TGG | - | chr2_4:5662682-5662701 | Msa0310860:intron | 30.0% |
| ! | GTATTATCAAACAAGGGTTT+TGG | + | chr2_4:5662905-5662924 | None:intergenic | 30.0% |
| ! | AGCTCTTATTTGATATACCT+TGG | - | chr2_4:5663196-5663215 | Msa0310860:CDS | 30.0% |
| ! | GCTCTTATTTGATATACCTT+GGG | - | chr2_4:5663197-5663216 | Msa0310860:CDS | 30.0% |
| AGAACATAAATTGAGGAGTA+AGG | + | chr2_4:5663285-5663304 | None:intergenic | 30.0% | |
| ! | TTAGTGCAATGTTTTGTCAT+TGG | + | chr2_4:5663542-5663561 | None:intergenic | 30.0% |
| ! | AATTTGGAGCAAGGAAATAT+GGG | + | chr2_4:5663645-5663664 | None:intergenic | 30.0% |
| ! | AAATTTGGAGCAAGGAAATA+TGG | + | chr2_4:5663646-5663665 | None:intergenic | 30.0% |
| ! | CAACAATAAAATTTGGAGCA+AGG | + | chr2_4:5663654-5663673 | None:intergenic | 30.0% |
| TAGTTAAAGAAATGAAGGCT+AGG | - | chr2_4:5663711-5663730 | Msa0310860:intron | 30.0% | |
| AGCAATAATCATATGGGTAT+GGG | + | chr2_4:5663747-5663766 | None:intergenic | 30.0% | |
| TAGCAATAATCATATGGGTA+TGG | + | chr2_4:5663748-5663767 | None:intergenic | 30.0% | |
| ! | TTTGAAACAATGTGTGAACA+TGG | - | chr2_4:5663774-5663793 | Msa0310860:intron | 30.0% |
| AAAGTGTACAAACTCTAAAC+AGG | + | chr2_4:5663836-5663855 | None:intergenic | 30.0% | |
| GCTGAAATTGTCTAATTACT+TGG | - | chr2_4:5664078-5664097 | Msa0310860:intron | 30.0% | |
| ! | ATTGTCTAATTACTTGGTGA+AGG | - | chr2_4:5664084-5664103 | Msa0310860:intron | 30.0% |
| !! | CTAACATAAAAGGCATTCAT+AGG | + | chr2_4:5664137-5664156 | None:intergenic | 30.0% |
| ! | AATGCCTTTTATGTTAGTGT+TGG | - | chr2_4:5664140-5664159 | Msa0310860:intron | 30.0% |
| GTAACCAACACTAACATAAA+AGG | + | chr2_4:5664147-5664166 | None:intergenic | 30.0% | |
| TAGAGAATGAACAAACGATA+TGG | + | chr2_4:5664169-5664188 | None:intergenic | 30.0% | |
| AATATCTAAAGGCGATATTG+GGG | - | chr2_4:5664217-5664236 | Msa0310860:CDS | 30.0% | |
| ATACGAAATGACTGGTAAAT+GGG | + | chr2_4:5664253-5664272 | None:intergenic | 30.0% | |
| !! | AGGTTATTGACTTATTGTAG+AGG | + | chr2_4:5664294-5664313 | None:intergenic | 30.0% |
| !!! | TAAAAGAAGGCCTTTGTTTT+GGG | + | chr2_4:5664324-5664343 | None:intergenic | 30.0% |
| ! | TCTAATTTTGTTCACAAGAG+AGG | + | chr2_4:5664476-5664495 | None:intergenic | 30.0% |
| CTCTTGTGAACAAAATTAGA+AGG | - | chr2_4:5664476-5664495 | Msa0310860:five_prime_UTR | 30.0% | |
| TCTATCTTTCTTAGTTAGGG+AGG | + | chr2_4:5661519-5661538 | None:intergenic | 35.0% | |
| CATCTACAAACTATGAGGAA+AGG | + | chr2_4:5661720-5661739 | None:intergenic | 35.0% | |
| CACAAAAATCGCAATGAGAA+CGG | + | chr2_4:5661961-5661980 | None:intergenic | 35.0% | |
| !!! | ATTTTCAGGTTCTCGAGTAT+TGG | - | chr2_4:5662094-5662113 | Msa0310860:intron | 35.0% |
| !!! | TTTTCAGGTTCTCGAGTATT+GGG | - | chr2_4:5662095-5662114 | Msa0310860:intron | 35.0% |
| ! | ATGTAACTTGTGACTTTGCA+AGG | + | chr2_4:5662331-5662350 | None:intergenic | 35.0% |
| AAGGAAAGACTACATATGTG+TGG | + | chr2_4:5662516-5662535 | None:intergenic | 35.0% | |
| !! | GGTTTTTCTTTTTTGCAGTG+CGG | - | chr2_4:5662703-5662722 | Msa0310860:intron | 35.0% |
| ! | TGCTATTTGCTTCTTTCTTG+TGG | - | chr2_4:5662797-5662816 | Msa0310860:intron | 35.0% |
| TAAACTCAGGACAACATTCA+AGG | + | chr2_4:5663048-5663067 | None:intergenic | 35.0% | |
| ATAAGTGCAACGAAGAGAAA+TGG | + | chr2_4:5663101-5663120 | None:intergenic | 35.0% | |
| !!! | TTCCTCTCCTTTTTTGTTGT+CGG | - | chr2_4:5663252-5663271 | Msa0310860:CDS | 35.0% |
| CATAAATTGAGGAGTAAGGA+CGG | + | chr2_4:5663281-5663300 | None:intergenic | 35.0% | |
| !!! | GTTTTAGAAAACCAACGCAA+AGG | + | chr2_4:5663381-5663400 | None:intergenic | 35.0% |
| GAACTATAGACATGCACATA+TGG | + | chr2_4:5663503-5663522 | None:intergenic | 35.0% | |
| ! | TGTTTTGTCATTGGAACCAA+GGG | + | chr2_4:5663533-5663552 | None:intergenic | 35.0% |
| ! | ATGTTTTGTCATTGGAACCA+AGG | + | chr2_4:5663534-5663553 | None:intergenic | 35.0% |
| ! | AGAAATGAAGGCTAGGATTT+TGG | - | chr2_4:5663718-5663737 | Msa0310860:intron | 35.0% |
| ! | GAAATGAAGGCTAGGATTTT+GGG | - | chr2_4:5663719-5663738 | Msa0310860:intron | 35.0% |
| ! | AAATGAAGGCTAGGATTTTG+GGG | - | chr2_4:5663720-5663739 | Msa0310860:intron | 35.0% |
| CGAATACATAAACGAGGATA+TGG | + | chr2_4:5663878-5663897 | None:intergenic | 35.0% | |
| TACGAAATGACTGGTAAATG+GGG | + | chr2_4:5664252-5664271 | None:intergenic | 35.0% | |
| CATACGAAATGACTGGTAAA+TGG | + | chr2_4:5664254-5664273 | None:intergenic | 35.0% | |
| !! | GTAAAAGAAGGCCTTTGTTT+TGG | + | chr2_4:5664325-5664344 | None:intergenic | 35.0% |
| ATCTTTCTTAGTTAGGGAGG+AGG | + | chr2_4:5661516-5661535 | None:intergenic | 40.0% | |
| TTCTCTTCATCTTCCTCTCT+AGG | + | chr2_4:5661648-5661667 | None:intergenic | 40.0% | |
| AGAGAGGAAGATGAAGAGAA+CGG | - | chr2_4:5661648-5661667 | Msa0310860:three_prime_UTR | 40.0% | |
| AACAGCAGAGAGAACGTTAA+CGG | + | chr2_4:5661784-5661803 | None:intergenic | 40.0% | |
| ! | CGTTCTCATTGCGATTTTTG+TGG | - | chr2_4:5661959-5661978 | Msa0310860:exon | 40.0% |
| TGGCGTAGTTTACGTTATCT+TGG | - | chr2_4:5662817-5662836 | Msa0310860:intron | 40.0% | |
| !! | ATGTTTTGAACTCAGACCCA+AGG | + | chr2_4:5663216-5663235 | None:intergenic | 40.0% |
| TAGGAGCGAATACATAAACG+AGG | + | chr2_4:5663884-5663903 | None:intergenic | 40.0% | |
| TGCTTCTATGAACACTTGAC+AGG | - | chr2_4:5663983-5664002 | Msa0310860:intron | 40.0% | |
| TATGAACACTTGACAGGAGT+TGG | - | chr2_4:5663989-5664008 | Msa0310860:intron | 40.0% | |
| !! | ATAAAAGGCATTCATAGGCC+AGG | + | chr2_4:5664132-5664151 | None:intergenic | 40.0% |
| ACGAAATGACTGGTAAATGG+GGG | + | chr2_4:5664251-5664270 | None:intergenic | 40.0% | |
| TTGTAGAGGCTCAAAACAGT+GGG | + | chr2_4:5664280-5664299 | None:intergenic | 40.0% | |
| ATTGTAGAGGCTCAAAACAG+TGG | + | chr2_4:5664281-5664300 | None:intergenic | 40.0% | |
| ! | TGAACTGTTGAAGTTGATCG+AGG | - | chr2_4:5664417-5664436 | Msa0310860:five_prime_UTR | 40.0% |
| ! | TGTTGAAGTTGATCGAGGAT+GGG | - | chr2_4:5664422-5664441 | Msa0310860:five_prime_UTR | 40.0% |
| ! | TTGTTCACAAGAGAGGTATG+AGG | + | chr2_4:5664469-5664488 | None:intergenic | 40.0% |
| TTCTTAGTTAGGGAGGAGGA+GGG | + | chr2_4:5661512-5661531 | None:intergenic | 45.0% | |
| TTTCTTAGTTAGGGAGGAGG+AGG | + | chr2_4:5661513-5661532 | None:intergenic | 45.0% | |
| GCAGAGAATAGCAGCTAAAG+CGG | + | chr2_4:5661757-5661776 | None:intergenic | 45.0% | |
| GCGATGATTCCGATGAATGA+AGG | + | chr2_4:5661885-5661904 | None:intergenic | 45.0% | |
| TGGTTCTCGTTGAGACTGAA+TGG | - | chr2_4:5661979-5661998 | Msa0310860:CDS | 45.0% | |
| AACCACGAACCTAGAACGTT+TGG | - | chr2_4:5662591-5662610 | Msa0310860:CDS | 45.0% | |
| ACCACGAACCTAGAACGTTT+GGG | - | chr2_4:5662592-5662611 | Msa0310860:CDS | 45.0% | |
| GCATTACACCCAAACGTTCT+AGG | + | chr2_4:5662603-5662622 | None:intergenic | 45.0% | |
| CACCGACAACAAAAAAGGAG+AGG | + | chr2_4:5663257-5663276 | None:intergenic | 45.0% | |
| ACGGTCACCGACAACAAAAA+AGG | + | chr2_4:5663262-5663281 | None:intergenic | 45.0% | |
| CTCTAGTGATCTCTTGCTTC+TGG | + | chr2_4:5663411-5663430 | None:intergenic | 45.0% | |
| ACACATCACCTCAAGATCCT+TGG | + | chr2_4:5663443-5663462 | None:intergenic | 45.0% | |
| CTATAGTTCTCTGTCTCCCT+TGG | - | chr2_4:5663514-5663533 | Msa0310860:intron | 45.0% | |
| GCAACTGCTTGTGACAGAAT+AGG | - | chr2_4:5664034-5664053 | Msa0310860:CDS | 45.0% | |
| AAGGCTGAAGAGACGACTAA+AGG | - | chr2_4:5664103-5664122 | Msa0310860:intron | 45.0% | |
| AGAGACGACTAAAGGAAACC+TGG | - | chr2_4:5664111-5664130 | Msa0310860:intron | 45.0% | |
| CTTCAACAGTTCAACGACGT+GGG | + | chr2_4:5664410-5664429 | None:intergenic | 45.0% | |
| ACTTCAACAGTTCAACGACG+TGG | + | chr2_4:5664411-5664430 | None:intergenic | 45.0% | |
| ! | CTGTTGAAGTTGATCGAGGA+TGG | - | chr2_4:5664421-5664440 | Msa0310860:five_prime_UTR | 45.0% |
| ! | GTTGAAGTTGATCGAGGATG+GGG | - | chr2_4:5664423-5664442 | Msa0310860:five_prime_UTR | 45.0% |
| AGACGTGAAGATGCCTAGAG+AGG | - | chr2_4:5661632-5661651 | Msa0310860:three_prime_UTR | 50.0% | |
| GAGGAAGATGAAGAGAACGG+TGG | - | chr2_4:5661651-5661670 | Msa0310860:three_prime_UTR | 50.0% | |
| ! | ACTCGACTCGTAGGTAGAAC+TGG | + | chr2_4:5661681-5661700 | None:intergenic | 50.0% |
| ! | CTTCGTTCAACTCGACTCGT+AGG | + | chr2_4:5661690-5661709 | None:intergenic | 50.0% |
| ! | ACCCAAACGTTCTAGGTTCG+TGG | + | chr2_4:5662596-5662615 | None:intergenic | 50.0% |
| ACTATAGCCAGGGAAAGCTC+TGG | + | chr2_4:5662738-5662757 | None:intergenic | 50.0% | |
| AGAGCTTTCCCTGGCTATAG+TGG | - | chr2_4:5662737-5662756 | Msa0310860:intron | 50.0% | |
| GAGCTTTCCCTGGCTATAGT+GGG | - | chr2_4:5662738-5662757 | Msa0310860:intron | 50.0% | |
| AGCTTTCCCTGGCTATAGTG+GGG | - | chr2_4:5662739-5662758 | Msa0310860:intron | 50.0% | |
| TTGAAGGGAGTCCTTTGCGT+TGG | - | chr2_4:5663367-5663386 | Msa0310860:intron | 50.0% | |
| CACTAGAGAGCAAGCAACCA+AGG | - | chr2_4:5663423-5663442 | Msa0310860:intron | 50.0% | |
| GCAAGCAACCAAGGATCTTG+AGG | - | chr2_4:5663432-5663451 | Msa0310860:intron | 50.0% | |
| GACTGGTAAATGGGGGAACA+CGG | + | chr2_4:5664244-5664263 | None:intergenic | 50.0% | |
| ! | TGGGAGGCATACGAAATGAC+TGG | + | chr2_4:5664261-5664280 | None:intergenic | 50.0% |
| TAGAGGCTCAAAACAGTGGG+AGG | + | chr2_4:5664277-5664296 | None:intergenic | 50.0% | |
| !!! | CCTTTGTTTTGGGTGTGGAG+AGG | + | chr2_4:5664314-5664333 | None:intergenic | 50.0% |
| CCTCTCCACACCCAAAACAA+AGG | - | chr2_4:5664311-5664330 | Msa0310860:CDS | 50.0% | |
| !!! | GAAGGCCTTTGTTTTGGGTG+TGG | + | chr2_4:5664319-5664338 | None:intergenic | 50.0% |
| ! | ACAAGAGAGGTATGAGGACG+AGG | + | chr2_4:5664463-5664482 | None:intergenic | 50.0% |
| !! | CAGGTTCTCGAGTATTGGGC+AGG | - | chr2_4:5662099-5662118 | Msa0310860:intron | 55.0% |
| !! | TTCTCGAGTATTGGGCAGGC+AGG | - | chr2_4:5662103-5662122 | Msa0310860:intron | 55.0% |
| !! | TCTCGAGTATTGGGCAGGCA+GGG | - | chr2_4:5662104-5662123 | Msa0310860:intron | 55.0% |
| GTGATGACCAGAGCTTTCCC+TGG | - | chr2_4:5662728-5662747 | Msa0310860:intron | 55.0% | |
| TTCGCTCCCCACTATAGCCA+GGG | + | chr2_4:5662748-5662767 | None:intergenic | 55.0% | |
| TTTCGCTCCCCACTATAGCC+AGG | + | chr2_4:5662749-5662768 | None:intergenic | 55.0% | |
| !! | CTCGAGTATTGGGCAGGCAG+GGG | - | chr2_4:5662105-5662124 | Msa0310860:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 5661500 | 5664517 | 5661500 | ID=Msa0310860;Name=Msa0310860 |
| chr2_4 | mRNA | 5661500 | 5664517 | 5661500 | ID=Msa0310860-mRNA-1;Parent=Msa0310860;Name=Msa0310860-mRNA-1;_AED=0.08;_eAED=0.08;_QI=142|1|1|1|1|1|6|462|190 |
| chr2_4 | exon | 5661500 | 5662012 | 5661500 | ID=Msa0310860-mRNA-1:exon:2137;Parent=Msa0310860-mRNA-1 |
| chr2_4 | exon | 5662564 | 5662644 | 5662564 | ID=Msa0310860-mRNA-1:exon:2136;Parent=Msa0310860-mRNA-1 |
| chr2_4 | exon | 5663179 | 5663296 | 5663179 | ID=Msa0310860-mRNA-1:exon:2135;Parent=Msa0310860-mRNA-1 |
| chr2_4 | exon | 5663875 | 5663915 | 5663875 | ID=Msa0310860-mRNA-1:exon:2134;Parent=Msa0310860-mRNA-1 |
| chr2_4 | exon | 5663992 | 5664087 | 5663992 | ID=Msa0310860-mRNA-1:exon:2133;Parent=Msa0310860-mRNA-1 |
| chr2_4 | exon | 5664190 | 5664517 | 5664190 | ID=Msa0310860-mRNA-1:exon:2132;Parent=Msa0310860-mRNA-1 |
| chr2_4 | five_prime_UTR | 5664376 | 5664517 | 5664376 | ID=Msa0310860-mRNA-1:five_prime_utr;Parent=Msa0310860-mRNA-1 |
| chr2_4 | CDS | 5664190 | 5664375 | 5664190 | ID=Msa0310860-mRNA-1:cds;Parent=Msa0310860-mRNA-1 |
| chr2_4 | CDS | 5663992 | 5664087 | 5663992 | ID=Msa0310860-mRNA-1:cds;Parent=Msa0310860-mRNA-1 |
| chr2_4 | CDS | 5663875 | 5663915 | 5663875 | ID=Msa0310860-mRNA-1:cds;Parent=Msa0310860-mRNA-1 |
| chr2_4 | CDS | 5663179 | 5663296 | 5663179 | ID=Msa0310860-mRNA-1:cds;Parent=Msa0310860-mRNA-1 |
| chr2_4 | CDS | 5662564 | 5662644 | 5662564 | ID=Msa0310860-mRNA-1:cds;Parent=Msa0310860-mRNA-1 |
| chr2_4 | CDS | 5661962 | 5662012 | 5661962 | ID=Msa0310860-mRNA-1:cds;Parent=Msa0310860-mRNA-1 |
| chr2_4 | three_prime_UTR | 5661500 | 5661961 | 5661500 | ID=Msa0310860-mRNA-1:three_prime_utr;Parent=Msa0310860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
