Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1335250 | XP_013444253.1 | 95.375 | 627 | 28 | 1 | 1 | 626 | 156 | 782 | 0.0 | 1179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1335250 | sp|P59278|Y1745_ARATH | 42.077 | 366 | 161 | 16 | 7 | 359 | 142 | 469 | 2.15e-49 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1335250 | A0A072TXL6 | 95.375 | 627 | 28 | 1 | 1 | 626 | 156 | 782 | 0.0 | 1179 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa1335250 | 0.807194 | 5.695191e-50 | -8.615850e-47 |
| Msa0003720 | Msa1335250 | 0.814339 | 1.620001e-51 | -8.615850e-47 |
| Msa0008090 | Msa1335250 | 0.815316 | 9.841780e-52 | -8.615850e-47 |
| Msa0011960 | Msa1335250 | 0.802505 | 5.435333e-49 | -8.615850e-47 |
| Msa0026150 | Msa1335250 | 0.830952 | 2.197640e-55 | -8.615850e-47 |
| Msa0027230 | Msa1335250 | 0.803727 | 3.036711e-49 | -8.615850e-47 |
| Msa0027770 | Msa1335250 | 0.804784 | 1.829278e-49 | -8.615850e-47 |
| Msa0029630 | Msa1335250 | 0.855792 | 4.972855e-62 | -8.615850e-47 |
| Msa0030300 | Msa1335250 | 0.801356 | 9.359293e-49 | -8.615850e-47 |
| Msa0038870 | Msa1335250 | 0.801534 | 8.607143e-49 | -8.615850e-47 |
| Msa0045340 | Msa1335250 | 0.800004 | 1.766544e-48 | -8.615850e-47 |
| Msa0047160 | Msa1335250 | 0.815675 | 8.185675e-52 | -8.615850e-47 |
| Msa0054440 | Msa1335250 | 0.808171 | 3.531061e-50 | -8.615850e-47 |
| Msa0059040 | Msa1335250 | 0.800654 | 1.302006e-48 | -8.615850e-47 |
| Msa0059110 | Msa1335250 | 0.818910 | 1.531504e-52 | -8.615850e-47 |
| Msa0061080 | Msa1335250 | 0.808859 | 2.518290e-50 | -8.615850e-47 |
| Msa0063530 | Msa1335250 | 0.802953 | 4.392503e-49 | -8.615850e-47 |
| Msa0069330 | Msa1335250 | 0.811213 | 7.835296e-51 | -8.615850e-47 |
| Msa0073670 | Msa1335250 | 0.810149 | 1.330722e-50 | -8.615850e-47 |
| Msa0073700 | Msa1335250 | 0.801588 | 8.388217e-49 | -8.615850e-47 |
| Msa0075500 | Msa1335250 | 0.825780 | 3.889013e-54 | -8.615850e-47 |
| Msa0076780 | Msa1335250 | 0.809403 | 1.924713e-50 | -8.615850e-47 |
| Msa0077900 | Msa1335250 | 0.807231 | 5.591193e-50 | -8.615850e-47 |
| Msa0079920 | Msa1335250 | 0.845491 | 3.929773e-59 | -8.615850e-47 |
| Msa0084080 | Msa1335250 | 0.832386 | 9.735093e-56 | -8.615850e-47 |
| Msa0090360 | Msa1335250 | 0.850006 | 2.243779e-60 | -8.615850e-47 |
| Msa0091610 | Msa1335250 | 0.805001 | 1.648107e-49 | -8.615850e-47 |
| Msa0094470 | Msa1335250 | 0.832557 | 8.830051e-56 | -8.615850e-47 |
| Msa0097810 | Msa1335250 | 0.815289 | 9.979404e-52 | -8.615850e-47 |
| Msa0104550 | Msa1335250 | 0.812754 | 3.615792e-51 | -8.615850e-47 |
| Msa0105620 | Msa1335250 | 0.806708 | 7.214134e-50 | -8.615850e-47 |
| Msa0112770 | Msa1335250 | 0.804789 | 1.824976e-49 | -8.615850e-47 |
| Msa0609410 | Msa1335250 | -0.832158 | 1.108565e-55 | -8.615850e-47 |
| Msa0615490 | Msa1335250 | 0.852310 | 5.021229e-61 | -8.615850e-47 |
| Msa0617640 | Msa1335250 | 0.803807 | 2.923092e-49 | -8.615850e-47 |
| Msa0620230 | Msa1335250 | 0.812081 | 5.071451e-51 | -8.615850e-47 |
| Msa0624060 | Msa1335250 | 0.800692 | 1.279103e-48 | -8.615850e-47 |
| Msa0625720 | Msa1335250 | 0.821250 | 4.460896e-53 | -8.615850e-47 |
| Msa0628420 | Msa1335250 | 0.804376 | 2.225279e-49 | -8.615850e-47 |
| Msa0639310 | Msa1335250 | 0.800021 | 1.752235e-48 | -8.615850e-47 |
| Msa0640940 | Msa1335250 | 0.805239 | 1.469510e-49 | -8.615850e-47 |
| Msa0641190 | Msa1335250 | 0.809006 | 2.342108e-50 | -8.615850e-47 |
| Msa0652690 | Msa1335250 | 0.819813 | 9.534880e-53 | -8.615850e-47 |
| Msa0663390 | Msa1335250 | 0.824045 | 9.983666e-54 | -8.615850e-47 |
| Msa0667050 | Msa1335250 | 0.801726 | 7.858446e-49 | -8.615850e-47 |
| Msa0679360 | Msa1335250 | 0.815456 | 9.161793e-52 | -8.615850e-47 |
| Msa0682680 | Msa1335250 | 0.823734 | 1.180931e-53 | -8.615850e-47 |
| Msa0689500 | Msa1335250 | 0.816063 | 6.708975e-52 | -8.615850e-47 |
| Msa0693060 | Msa1335250 | 0.804059 | 2.590928e-49 | -8.615850e-47 |
| Msa0695130 | Msa1335250 | 0.837706 | 4.436093e-57 | -8.615850e-47 |
| Msa0698540 | Msa1335250 | 0.876830 | 1.021810e-68 | -8.615850e-47 |
| Msa0705390 | Msa1335250 | 0.822429 | 2.380022e-53 | -8.615850e-47 |
| Msa0709160 | Msa1335250 | 0.803637 | 3.170404e-49 | -8.615850e-47 |
| Msa0711780 | Msa1335250 | 0.806356 | 8.559977e-50 | -8.615850e-47 |
| Msa0721280 | Msa1335250 | 0.805232 | 1.474099e-49 | -8.615850e-47 |
| Msa0722020 | Msa1335250 | 0.802422 | 5.651995e-49 | -8.615850e-47 |
| Msa0734960 | Msa1335250 | 0.805131 | 1.548022e-49 | -8.615850e-47 |
| Msa0752700 | Msa1335250 | 0.842575 | 2.377593e-58 | -8.615850e-47 |
| Msa0756110 | Msa1335250 | 0.802439 | 5.607258e-49 | -8.615850e-47 |
| Msa0763890 | Msa1335250 | 0.811437 | 7.005734e-51 | -8.615850e-47 |
| Msa0763920 | Msa1335250 | 0.802413 | 5.678060e-49 | -8.615850e-47 |
| Msa0786270 | Msa1335250 | 0.822618 | 2.151140e-53 | -8.615850e-47 |
| Msa0790400 | Msa1335250 | 0.805047 | 1.611533e-49 | -8.615850e-47 |
| Msa0794670 | Msa1335250 | 0.810577 | 1.075501e-50 | -8.615850e-47 |
| Msa0794970 | Msa1335250 | 0.848854 | 4.700675e-60 | -8.615850e-47 |
| Msa0805500 | Msa1335250 | 0.802133 | 6.483882e-49 | -8.615850e-47 |
| Msa0830540 | Msa1335250 | 0.802316 | 5.945304e-49 | -8.615850e-47 |
| Msa0831100 | Msa1335250 | 0.841646 | 4.188423e-58 | -8.615850e-47 |
| Msa0125450 | Msa1335250 | 0.852720 | 3.834970e-61 | -8.615850e-47 |
| Msa0125540 | Msa1335250 | 0.843919 | 1.041744e-58 | -8.615850e-47 |
| Msa0127020 | Msa1335250 | 0.818201 | 2.218026e-52 | -8.615850e-47 |
| Msa0127040 | Msa1335250 | 0.805401 | 1.358733e-49 | -8.615850e-47 |
| Msa0136120 | Msa1335250 | 0.825340 | 4.945271e-54 | -8.615850e-47 |
| Msa0137840 | Msa1335250 | 0.846850 | 1.676095e-59 | -8.615850e-47 |
| Msa0144360 | Msa1335250 | 0.803080 | 4.134414e-49 | -8.615850e-47 |
| Msa0144540 | Msa1335250 | 0.813449 | 2.544912e-51 | -8.615850e-47 |
| Msa0146280 | Msa1335250 | 0.827430 | 1.571605e-54 | -8.615850e-47 |
| Msa0169280 | Msa1335250 | 0.818702 | 1.707528e-52 | -8.615850e-47 |
| Msa0169610 | Msa1335250 | 0.810804 | 9.605306e-51 | -8.615850e-47 |
| Msa0171120 | Msa1335250 | 0.814173 | 1.762610e-51 | -8.615850e-47 |
| Msa0171870 | Msa1335250 | 0.805021 | 1.632192e-49 | -8.615850e-47 |
| Msa0173800 | Msa1335250 | 0.821788 | 3.351219e-53 | -8.615850e-47 |
| Msa0174860 | Msa1335250 | 0.812040 | 5.177701e-51 | -8.615850e-47 |
| Msa0184040 | Msa1335250 | 0.854588 | 1.113707e-61 | -8.615850e-47 |
| Msa0189300 | Msa1335250 | 0.803053 | 4.189117e-49 | -8.615850e-47 |
| Msa0198700 | Msa1335250 | 0.815318 | 9.828855e-52 | -8.615850e-47 |
| Msa0205230 | Msa1335250 | 0.819158 | 1.344891e-52 | -8.615850e-47 |
| Msa0206010 | Msa1335250 | 0.802217 | 6.228683e-49 | -8.615850e-47 |
| Msa0208220 | Msa1335250 | 0.805562 | 1.257031e-49 | -8.615850e-47 |
| Msa0208350 | Msa1335250 | 0.805824 | 1.107633e-49 | -8.615850e-47 |
| Msa0209500 | Msa1335250 | 0.809277 | 2.049137e-50 | -8.615850e-47 |
| Msa0212930 | Msa1335250 | 0.840803 | 6.975961e-58 | -8.615850e-47 |
| Msa0223330 | Msa1335250 | 0.806133 | 9.537373e-50 | -8.615850e-47 |
| Msa0223340 | Msa1335250 | 0.806235 | 9.077117e-50 | -8.615850e-47 |
| Msa0231980 | Msa1335250 | 0.820777 | 5.733830e-53 | -8.615850e-47 |
| Msa0232050 | Msa1335250 | 0.810713 | 1.005096e-50 | -8.615850e-47 |
| Msa0237200 | Msa1335250 | 0.825956 | 3.533255e-54 | -8.615850e-47 |
| Msa1245930 | Msa1335250 | 0.818632 | 1.771418e-52 | -8.615850e-47 |
| Msa1250530 | Msa1335250 | 0.807671 | 4.510901e-50 | -8.615850e-47 |
| Msa1254730 | Msa1335250 | 0.803635 | 3.172780e-49 | -8.615850e-47 |
| Msa1256470 | Msa1335250 | 0.801921 | 7.165612e-49 | -8.615850e-47 |
| Msa1259060 | Msa1335250 | 0.818709 | 1.701714e-52 | -8.615850e-47 |
| Msa1264210 | Msa1335250 | 0.809643 | 1.709624e-50 | -8.615850e-47 |
| Msa1265630 | Msa1335250 | 0.816971 | 4.200003e-52 | -8.615850e-47 |
| Msa1270620 | Msa1335250 | 0.807777 | 4.283367e-50 | -8.615850e-47 |
| Msa1270630 | Msa1335250 | 0.845138 | 4.894330e-59 | -8.615850e-47 |
| Msa1270690 | Msa1335250 | 0.813005 | 3.186378e-51 | -8.615850e-47 |
| Msa1270700 | Msa1335250 | 0.844694 | 6.451443e-59 | -8.615850e-47 |
| Msa1278900 | Msa1335250 | 0.821787 | 3.353468e-53 | -8.615850e-47 |
| Msa1295110 | Msa1335250 | 0.819057 | 1.418547e-52 | -8.615850e-47 |
| Msa1295930 | Msa1335250 | 0.800010 | 1.761554e-48 | -8.615850e-47 |
| Msa1296830 | Msa1335250 | 0.808371 | 3.200522e-50 | -8.615850e-47 |
| Msa1299700 | Msa1335250 | 0.801191 | 1.011611e-48 | -8.615850e-47 |
| Msa1302380 | Msa1335250 | 0.827705 | 1.349722e-54 | -8.615850e-47 |
| Msa1305660 | Msa1335250 | 0.804118 | 2.518499e-49 | -8.615850e-47 |
| Msa1306990 | Msa1335250 | 0.817924 | 2.561874e-52 | -8.615850e-47 |
| Msa1328640 | Msa1335250 | 0.816192 | 6.275862e-52 | -8.615850e-47 |
| Msa1328710 | Msa1335250 | 0.815840 | 7.523294e-52 | -8.615850e-47 |
| Msa1332220 | Msa1335250 | 0.811089 | 8.335910e-51 | -8.615850e-47 |
| Msa1332590 | Msa1335250 | 0.853235 | 2.733214e-61 | -8.615850e-47 |
| Msa1335250 | Msa1341490 | 0.800875 | 1.173898e-48 | -8.615850e-47 |
| Msa1335250 | Msa1342410 | 0.832613 | 8.555348e-56 | -8.615850e-47 |
| Msa1335250 | Msa1346730 | 0.838890 | 2.197818e-57 | -8.615850e-47 |
| Msa1335250 | Msa1351540 | 0.835454 | 1.662343e-56 | -8.615850e-47 |
| Msa1335250 | Msa1353980 | 0.802156 | 6.413485e-49 | -8.615850e-47 |
| Msa1335250 | Msa1356610 | 0.829500 | 4.972744e-55 | -8.615850e-47 |
| Msa1335250 | Msa1357190 | 0.801437 | 9.006419e-49 | -8.615850e-47 |
| Msa1335250 | Msa1357890 | 0.806029 | 1.003051e-49 | -8.615850e-47 |
| Msa1335250 | Msa1359560 | 0.803744 | 3.012190e-49 | -8.615850e-47 |
| Msa1335250 | Msa1362420 | 0.807661 | 4.533183e-50 | -8.615850e-47 |
| Msa1335250 | Msa1367590 | 0.838274 | 3.169007e-57 | -8.615850e-47 |
| Msa1335250 | Msa1368120 | 0.818865 | 1.568270e-52 | -8.615850e-47 |
| Msa1335250 | Msa1374040 | 0.800986 | 1.114267e-48 | -8.615850e-47 |
| Msa1335250 | Msa1374060 | 0.826973 | 2.021766e-54 | -8.615850e-47 |
| Msa1335250 | Msa1376650 | 0.815939 | 7.148431e-52 | -8.615850e-47 |
| Msa1335250 | Msa1381350 | 0.862106 | 6.409491e-64 | -8.615850e-47 |
| Msa1335250 | Msa1381780 | 0.805807 | 1.116937e-49 | -8.615850e-47 |
| Msa1335250 | Msa1382560 | 0.819491 | 1.129743e-52 | -8.615850e-47 |
| Msa1335250 | Msa1382780 | 0.808229 | 3.432112e-50 | -8.615850e-47 |
| Msa1335250 | Msa1394290 | 0.815751 | 7.875057e-52 | -8.615850e-47 |
| Msa1335250 | Msa1398090 | 0.807632 | 4.598538e-50 | -8.615850e-47 |
| Msa1335250 | Msa1400580 | 0.819406 | 1.181133e-52 | -8.615850e-47 |
| Msa1335250 | Msa1402400 | 0.822233 | 2.643593e-53 | -8.615850e-47 |
| Msa1335250 | Msa1404410 | 0.836637 | 8.326557e-57 | -8.615850e-47 |
| Msa1335250 | Msa1407580 | 0.807112 | 5.927121e-50 | -8.615850e-47 |
| Msa1335250 | Msa1411950 | 0.805249 | 1.462388e-49 | -8.615850e-47 |
| Msa1335250 | Msa1419870 | 0.839259 | 1.763367e-57 | -8.615850e-47 |
| Msa1335250 | Msa1432420 | 0.802406 | 5.696066e-49 | -8.615850e-47 |
| Msa1335250 | Msa1433390 | 0.845201 | 4.706203e-59 | -8.615850e-47 |
| Msa1335250 | Msa1443300 | 0.815054 | 1.125298e-51 | -8.615850e-47 |
| Msa1335250 | Msa1443850 | 0.824816 | 6.575929e-54 | -8.615850e-47 |
| Msa1335250 | Msa1445940 | 0.801143 | 1.034858e-48 | -8.615850e-47 |
| Msa1335250 | Msa1450720 | 0.845278 | 4.486347e-59 | -8.615850e-47 |
| Msa1335250 | Msa1454680 | 0.814162 | 1.772796e-51 | -8.615850e-47 |
| Msa1335250 | Msa1457920 | 0.811470 | 6.890324e-51 | -8.615850e-47 |
| Msa1335250 | Msa1458290 | 0.824548 | 7.606217e-54 | -8.615850e-47 |
| Msa1335250 | Msa1458610 | 0.810482 | 1.127868e-50 | -8.615850e-47 |
| Msa1335250 | Msa1458810 | 0.801564 | 8.485204e-49 | -8.615850e-47 |
| Msa1335250 | Msa1459960 | 0.811703 | 6.131527e-51 | -8.615850e-47 |
| Msa0365700 | Msa1335250 | 0.804581 | 2.016432e-49 | -8.615850e-47 |
| Msa0376280 | Msa1335250 | 0.831922 | 1.268453e-55 | -8.615850e-47 |
| Msa0376300 | Msa1335250 | 0.843671 | 1.213899e-58 | -8.615850e-47 |
| Msa0376310 | Msa1335250 | 0.836662 | 8.204387e-57 | -8.615850e-47 |
| Msa0376350 | Msa1335250 | 0.805183 | 1.509300e-49 | -8.615850e-47 |
| Msa0378970 | Msa1335250 | 0.805942 | 1.046415e-49 | -8.615850e-47 |
| Msa0380300 | Msa1335250 | 0.823331 | 1.467242e-53 | -8.615850e-47 |
| Msa0381080 | Msa1335250 | 0.809602 | 1.745141e-50 | -8.615850e-47 |
| Msa0388700 | Msa1335250 | 0.834682 | 2.603050e-56 | -8.615850e-47 |
| Msa0392270 | Msa1335250 | 0.801693 | 7.980975e-49 | -8.615850e-47 |
| Msa0395980 | Msa1335250 | 0.810922 | 9.060643e-51 | -8.615850e-47 |
| Msa0410500 | Msa1335250 | 0.811202 | 7.875827e-51 | -8.615850e-47 |
| Msa0422400 | Msa1335250 | 0.833323 | 5.695425e-56 | -8.615850e-47 |
| Msa0458640 | Msa1335250 | 0.829026 | 6.479095e-55 | -8.615850e-47 |
| Msa0474950 | Msa1335250 | 0.810663 | 1.030432e-50 | -8.615850e-47 |
| Msa0480780 | Msa1335250 | 0.818565 | 1.834265e-52 | -8.615850e-47 |
| Msa0481030 | Msa1335250 | 0.801755 | 7.751605e-49 | -8.615850e-47 |
| Msa0481530 | Msa1335250 | 0.834157 | 3.524934e-56 | -8.615850e-47 |
| Msa0980540 | Msa1335250 | 0.801960 | 7.034468e-49 | -8.615850e-47 |
| Msa0997970 | Msa1335250 | 0.811006 | 8.686302e-51 | -8.615850e-47 |
| Msa1002960 | Msa1335250 | 0.808576 | 2.893411e-50 | -8.615850e-47 |
| Msa1009750 | Msa1335250 | 0.842085 | 3.206662e-58 | -8.615850e-47 |
| Msa1023920 | Msa1335250 | 0.811979 | 5.337865e-51 | -8.615850e-47 |
| Msa1024750 | Msa1335250 | 0.810051 | 1.396607e-50 | -8.615850e-47 |
| Msa1027250 | Msa1335250 | 0.804459 | 2.138259e-49 | -8.615850e-47 |
| Msa1027300 | Msa1335250 | 0.805000 | 1.649107e-49 | -8.615850e-47 |
| Msa1041210 | Msa1335250 | 0.828412 | 9.123004e-55 | -8.615850e-47 |
| Msa1041670 | Msa1335250 | 0.814827 | 1.263434e-51 | -8.615850e-47 |
| Msa1041850 | Msa1335250 | 0.806489 | 8.022740e-50 | -8.615850e-47 |
| Msa1051330 | Msa1335250 | 0.837660 | 4.559693e-57 | -8.615850e-47 |
| Msa1055410 | Msa1335250 | 0.808764 | 2.637872e-50 | -8.615850e-47 |
| Msa1059960 | Msa1335250 | 0.813029 | 3.148115e-51 | -8.615850e-47 |
| Msa1062920 | Msa1335250 | 0.801293 | 9.641316e-49 | -8.615850e-47 |
| Msa1078420 | Msa1335250 | 0.821993 | 3.004222e-53 | -8.615850e-47 |
| Msa1080150 | Msa1335250 | 0.826205 | 3.082398e-54 | -8.615850e-47 |
| Msa1080270 | Msa1335250 | 0.852830 | 3.568330e-61 | -8.615850e-47 |
| Msa1081930 | Msa1335250 | 0.814512 | 1.483471e-51 | -8.615850e-47 |
| Msa1091940 | Msa1335250 | 0.829345 | 5.423156e-55 | -8.615850e-47 |
| Msa1093840 | Msa1335250 | 0.800947 | 1.134924e-48 | -8.615850e-47 |
| Msa1097820 | Msa1335250 | 0.843842 | 1.092821e-58 | -8.615850e-47 |
| Msa1105160 | Msa1335250 | 0.810325 | 1.219521e-50 | -8.615850e-47 |
| Msa1106700 | Msa1335250 | 0.804449 | 2.148625e-49 | -8.615850e-47 |
| Msa0244980 | Msa1335250 | 0.824166 | 9.351995e-54 | -8.615850e-47 |
| Msa0249580 | Msa1335250 | 0.812325 | 4.487880e-51 | -8.615850e-47 |
| Msa0253200 | Msa1335250 | 0.835310 | 1.808112e-56 | -8.615850e-47 |
| Msa0259240 | Msa1335250 | 0.804792 | 1.822551e-49 | -8.615850e-47 |
| Msa0265340 | Msa1335250 | 0.806321 | 8.705934e-50 | -8.615850e-47 |
| Msa0274970 | Msa1335250 | 0.828249 | 9.984513e-55 | -8.615850e-47 |
| Msa0275360 | Msa1335250 | 0.821397 | 4.125892e-53 | -8.615850e-47 |
| Msa0279220 | Msa1335250 | 0.802867 | 4.575127e-49 | -8.615850e-47 |
| Msa0281530 | Msa1335250 | 0.813910 | 2.014775e-51 | -8.615850e-47 |
| Msa0283420 | Msa1335250 | 0.821187 | 4.612542e-53 | -8.615850e-47 |
| Msa0285330 | Msa1335250 | 0.801886 | 7.286140e-49 | -8.615850e-47 |
| Msa0287790 | Msa1335250 | 0.803642 | 3.162680e-49 | -8.615850e-47 |
| Msa0292030 | Msa1335250 | 0.835468 | 1.648639e-56 | -8.615850e-47 |
| Msa0292120 | Msa1335250 | 0.801435 | 9.015523e-49 | -8.615850e-47 |
| Msa0296790 | Msa1335250 | 0.800542 | 1.372361e-48 | -8.615850e-47 |
| Msa0307850 | Msa1335250 | 0.826425 | 2.731558e-54 | -8.615850e-47 |
| Msa0309750 | Msa1335250 | 0.812848 | 3.447648e-51 | -8.615850e-47 |
| Msa0310600 | Msa1335250 | 0.815705 | 8.062158e-52 | -8.615850e-47 |
| Msa0310660 | Msa1335250 | 0.824774 | 6.726010e-54 | -8.615850e-47 |
| Msa0311720 | Msa1335250 | 0.807579 | 4.718308e-50 | -8.615850e-47 |
| Msa0315680 | Msa1335250 | 0.823757 | 1.166580e-53 | -8.615850e-47 |
| Msa0315850 | Msa1335250 | 0.829840 | 4.110137e-55 | -8.615850e-47 |
| Msa0320590 | Msa1335250 | 0.806097 | 9.707699e-50 | -8.615850e-47 |
| Msa0321690 | Msa1335250 | 0.808623 | 2.827861e-50 | -8.615850e-47 |
| Msa0324240 | Msa1335250 | 0.820056 | 8.389206e-53 | -8.615850e-47 |
| Msa0326480 | Msa1335250 | 0.807813 | 4.207478e-50 | -8.615850e-47 |
| Msa0330310 | Msa1335250 | 0.849656 | 2.810912e-60 | -8.615850e-47 |
| Msa0336290 | Msa1335250 | 0.812918 | 3.329235e-51 | -8.615850e-47 |
| Msa0339910 | Msa1335250 | 0.822098 | 2.840851e-53 | -8.615850e-47 |
| Msa0341540 | Msa1335250 | 0.810530 | 1.101094e-50 | -8.615850e-47 |
| Msa0344540 | Msa1335250 | 0.809376 | 1.950880e-50 | -8.615850e-47 |
| Msa0363060 | Msa1335250 | 0.802377 | 5.773838e-49 | -8.615850e-47 |
| Msa0363640 | Msa1335250 | 0.845987 | 2.881298e-59 | -8.615850e-47 |
| Msa1107900 | Msa1335250 | 0.812916 | 3.331351e-51 | -8.615850e-47 |
| Msa1119200 | Msa1335250 | 0.824150 | 9.435164e-54 | -8.615850e-47 |
| Msa1123350 | Msa1335250 | 0.805722 | 1.163466e-49 | -8.615850e-47 |
| Msa1123470 | Msa1335250 | 0.814608 | 1.412872e-51 | -8.615850e-47 |
| Msa1126830 | Msa1335250 | 0.832860 | 7.427831e-56 | -8.615850e-47 |
| Msa1126850 | Msa1335250 | 0.804944 | 1.693540e-49 | -8.615850e-47 |
| Msa1126920 | Msa1335250 | 0.801554 | 8.524070e-49 | -8.615850e-47 |
| Msa1128600 | Msa1335250 | 0.849975 | 2.289767e-60 | -8.615850e-47 |
| Msa1144890 | Msa1335250 | 0.801121 | 1.045420e-48 | -8.615850e-47 |
| Msa1154490 | Msa1335250 | 0.807811 | 4.212669e-50 | -8.615850e-47 |
| Msa1160590 | Msa1335250 | 0.822624 | 2.144154e-53 | -8.615850e-47 |
| Msa1165740 | Msa1335250 | 0.811794 | 5.857144e-51 | -8.615850e-47 |
| Msa1165780 | Msa1335250 | 0.818660 | 1.745960e-52 | -8.615850e-47 |
| Msa1165940 | Msa1335250 | 0.811584 | 6.507821e-51 | -8.615850e-47 |
| Msa1165960 | Msa1335250 | 0.845536 | 3.821137e-59 | -8.615850e-47 |
| Msa1166560 | Msa1335250 | 0.806552 | 7.781026e-50 | -8.615850e-47 |
| Msa1167010 | Msa1335250 | 0.802130 | 6.491228e-49 | -8.615850e-47 |
| Msa1168580 | Msa1335250 | 0.809139 | 2.193486e-50 | -8.615850e-47 |
| Msa1169530 | Msa1335250 | 0.818457 | 1.940668e-52 | -8.615850e-47 |
| Msa1169550 | Msa1335250 | 0.841323 | 5.094901e-58 | -8.615850e-47 |
| Msa1178060 | Msa1335250 | 0.826354 | 2.841263e-54 | -8.615850e-47 |
| Msa1179950 | Msa1335250 | 0.813290 | 2.758333e-51 | -8.615850e-47 |
| Msa1179980 | Msa1335250 | 0.811703 | 6.130541e-51 | -8.615850e-47 |
| Msa1179990 | Msa1335250 | 0.847327 | 1.240200e-59 | -8.615850e-47 |
| Msa1189070 | Msa1335250 | 0.800322 | 1.521572e-48 | -8.615850e-47 |
| Msa1199570 | Msa1335250 | 0.812186 | 4.812091e-51 | -8.615850e-47 |
| Msa1199990 | Msa1335250 | 0.819794 | 9.630798e-53 | -8.615850e-47 |
| Msa1201810 | Msa1335250 | 0.803876 | 2.827323e-49 | -8.615850e-47 |
| Msa1204630 | Msa1335250 | 0.800065 | 1.716456e-48 | -8.615850e-47 |
| Msa1205590 | Msa1335250 | 0.820454 | 6.800086e-53 | -8.615850e-47 |
| Msa1208880 | Msa1335250 | 0.826673 | 2.384385e-54 | -8.615850e-47 |
| Msa1209200 | Msa1335250 | 0.807200 | 5.676124e-50 | -8.615850e-47 |
| Msa1209760 | Msa1335250 | 0.838833 | 2.273446e-57 | -8.615850e-47 |
| Msa1211340 | Msa1335250 | 0.800687 | 1.282134e-48 | -8.615850e-47 |
| Msa1212950 | Msa1335250 | 0.816327 | 5.855187e-52 | -8.615850e-47 |
| Msa1216720 | Msa1335250 | 0.801713 | 7.906601e-49 | -8.615850e-47 |
| Msa1217580 | Msa1335250 | 0.844823 | 5.956015e-59 | -8.615850e-47 |
| Msa0484740 | Msa1335250 | 0.807336 | 5.313141e-50 | -8.615850e-47 |
| Msa0485120 | Msa1335250 | 0.806619 | 7.531733e-50 | -8.615850e-47 |
| Msa0491000 | Msa1335250 | 0.822821 | 1.929648e-53 | -8.615850e-47 |
| Msa0506400 | Msa1335250 | 0.812436 | 4.244112e-51 | -8.615850e-47 |
| Msa0511770 | Msa1335250 | 0.806268 | 8.935143e-50 | -8.615850e-47 |
| Msa0512340 | Msa1335250 | 0.808958 | 2.397894e-50 | -8.615850e-47 |
| Msa0523050 | Msa1335250 | 0.807299 | 5.408703e-50 | -8.615850e-47 |
| Msa0524500 | Msa1335250 | 0.827059 | 1.928232e-54 | -8.615850e-47 |
| Msa0529890 | Msa1335250 | 0.818239 | 2.174524e-52 | -8.615850e-47 |
| Msa0531250 | Msa1335250 | 0.805222 | 1.481157e-49 | -8.615850e-47 |
| Msa0539410 | Msa1335250 | 0.805713 | 1.168849e-49 | -8.615850e-47 |
| Msa0542290 | Msa1335250 | 0.836262 | 1.037261e-56 | -8.615850e-47 |
| Msa0547160 | Msa1335250 | 0.828703 | 7.759954e-55 | -8.615850e-47 |
| Msa0555640 | Msa1335250 | 0.801131 | 1.040706e-48 | -8.615850e-47 |
| Msa0556060 | Msa1335250 | 0.854217 | 1.426221e-61 | -8.615850e-47 |
| Msa0561230 | Msa1335250 | 0.806873 | 6.657811e-50 | -8.615850e-47 |
| Msa0572840 | Msa1335250 | 0.812676 | 3.761357e-51 | -8.615850e-47 |
| Msa0575470 | Msa1335250 | 0.806671 | 7.345920e-50 | -8.615850e-47 |
| Msa0580180 | Msa1335250 | 0.808661 | 2.775791e-50 | -8.615850e-47 |
| Msa0581110 | Msa1335250 | 0.835609 | 1.518607e-56 | -8.615850e-47 |
| Msa0581130 | Msa1335250 | 0.844349 | 7.988025e-59 | -8.615850e-47 |
| Msa0581280 | Msa1335250 | 0.807761 | 4.316466e-50 | -8.615850e-47 |
| Msa0585560 | Msa1335250 | 0.824030 | 1.006553e-53 | -8.615850e-47 |
| Msa0600450 | Msa1335250 | 0.811503 | 6.775685e-51 | -8.615850e-47 |
| Msa0869100 | Msa1335250 | 0.812618 | 3.872284e-51 | -8.615850e-47 |
| Msa0880450 | Msa1335250 | 0.805459 | 1.321260e-49 | -8.615850e-47 |
| Msa0887250 | Msa1335250 | 0.811658 | 6.272517e-51 | -8.615850e-47 |
| Msa0892640 | Msa1335250 | 0.837317 | 5.581613e-57 | -8.615850e-47 |
| Msa0898040 | Msa1335250 | 0.808818 | 2.568864e-50 | -8.615850e-47 |
| Msa0924470 | Msa1335250 | 0.820493 | 6.662543e-53 | -8.615850e-47 |
| Msa0926850 | Msa1335250 | 0.823422 | 1.397453e-53 | -8.615850e-47 |
| Msa0930140 | Msa1335250 | 0.818340 | 2.063257e-52 | -8.615850e-47 |
| Msa0930860 | Msa1335250 | 0.813774 | 2.158729e-51 | -8.615850e-47 |
| Msa0932570 | Msa1335250 | 0.815115 | 1.090352e-51 | -8.615850e-47 |
| Msa0933310 | Msa1335250 | 0.817260 | 3.615623e-52 | -8.615850e-47 |
| Msa0944200 | Msa1335250 | 0.803983 | 2.686388e-49 | -8.615850e-47 |
| Msa0945240 | Msa1335250 | 0.816638 | 4.986892e-52 | -8.615850e-47 |
| Msa0970530 | Msa1335250 | 0.804986 | 1.660144e-49 | -8.615850e-47 |
| Msa0970600 | Msa1335250 | 0.802095 | 6.599765e-49 | -8.615850e-47 |
| Msa0971090 | Msa1335250 | 0.810554 | 1.088179e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1335250 | MtrunA17_Chr8g0341521 | 95.375 | 627 | 28 | 1 | 1 | 626 | 156 | 782 | 0.0 | 1179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1335250 | AT3G21295.2 | 33.968 | 630 | 266 | 25 | 15 | 625 | 144 | 642 | 3.13e-60 | 213 |
| Msa1335250 | AT3G21295.1 | 34.185 | 626 | 262 | 25 | 15 | 621 | 144 | 638 | 4.70e-60 | 212 |
| Msa1335250 | AT1G51745.2 | 42.077 | 366 | 161 | 16 | 7 | 359 | 83 | 410 | 4.28e-51 | 184 |
| Msa1335250 | AT1G51745.2 | 58.824 | 51 | 21 | 0 | 466 | 516 | 425 | 475 | 6.75e-12 | 68.6 |
| Msa1335250 | AT1G51745.1 | 42.077 | 366 | 161 | 16 | 7 | 359 | 142 | 469 | 3.09e-50 | 184 |
| Msa1335250 | AT1G51745.1 | 44.586 | 157 | 75 | 3 | 466 | 621 | 484 | 629 | 1.08e-25 | 112 |
| Msa1335250 | AT3G21295.3 | 37.572 | 346 | 147 | 15 | 30 | 357 | 158 | 452 | 2.17e-34 | 137 |
Find 219 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAATTCCAACCATATTT+TGG | 0.119098 | tig0000235:+19584 | None:intergenic |
| CTTCTTGTGGTGACCGGTTT+TGG | 0.191459 | tig0000235:+16598 | None:intergenic |
| GTAAACATGGTTTGGTTATT+AGG | 0.204727 | tig0000235:-16068 | Msa1335250:three_prime_UTR |
| TAGTACTTCATAAGAGATTT+TGG | 0.244480 | tig0000235:-16260 | Msa1335250:three_prime_UTR |
| ATAACGGATGTAAAGATTTC+AGG | 0.246284 | tig0000235:-18338 | Msa1335250:CDS |
| GTCATTTGTGACCAGCTTCC+CGG | 0.247953 | tig0000235:-18386 | Msa1335250:CDS |
| TTTATGCTTCTCCCAAAATA+TGG | 0.251249 | tig0000235:-19596 | Msa1335250:intron |
| GAATCTGATGCTTATTTAAC+AGG | 0.283257 | tig0000235:-17108 | Msa1335250:CDS |
| AACCCGTGAAATCAGTTATC+AGG | 0.283829 | tig0000235:-16325 | Msa1335250:exon |
| AAAATCTGCCGTTTCATATC+TGG | 0.284502 | tig0000235:+16852 | None:intergenic |
| AGGTCAAGCAGAAGGGTTTC+GGG | 0.289944 | tig0000235:-16959 | Msa1335250:CDS |
| TTAGGTAATTAACCTGATAT+TGG | 0.293764 | tig0000235:-16050 | Msa1335250:three_prime_UTR |
| GGGACTTGAGCAAGCATATT+GGG | 0.303256 | tig0000235:-16939 | Msa1335250:CDS |
| CCCTTTGACAGTTGAGGTAT+TGG | 0.305901 | tig0000235:-16698 | Msa1335250:CDS |
| TTTAAAGAACCGTTATGATT+AGG | 0.316640 | tig0000235:+18764 | None:intergenic |
| TAGGTAATTAACCTGATATT+GGG | 0.319377 | tig0000235:-16049 | Msa1335250:three_prime_UTR |
| TTTATAACAAACCCAATATC+AGG | 0.320513 | tig0000235:+16038 | None:intergenic |
| AAGTAATGAATCTGGTTGTT+TGG | 0.322814 | tig0000235:-16017 | Msa1335250:three_prime_UTR |
| AATGAGACTATGGAAATATC+AGG | 0.322937 | tig0000235:-18164 | Msa1335250:CDS |
| CTCATTGCCATCACCAGAAT+TGG | 0.335060 | tig0000235:+18871 | None:intergenic |
| TATTCGATGTCCCATTTGTT+GGG | 0.337397 | tig0000235:-18112 | Msa1335250:CDS |
| AATAGAAAGGGACAGGGTTT+AGG | 0.340602 | tig0000235:-18626 | Msa1335250:CDS |
| TCTCTGTCATTGAGTCGTTC+AGG | 0.349684 | tig0000235:+18570 | None:intergenic |
| CTCCTTCTTCCATGCATAGA+TGG | 0.350500 | tig0000235:+18737 | None:intergenic |
| ATACCAGATTGTGACAATTC+TGG | 0.360488 | tig0000235:+18800 | None:intergenic |
| CCATCGTCTTCTGAATCATT+AGG | 0.361876 | tig0000235:+18707 | None:intergenic |
| AAGGTCAAGCAGAAGGGTTT+CGG | 0.362990 | tig0000235:-16960 | Msa1335250:CDS |
| AGTAATGAATCTGGTTGTTT+GGG | 0.364979 | tig0000235:-16016 | Msa1335250:three_prime_UTR |
| TTGAGTGGCAAAGCCTTTAT+CGG | 0.373399 | tig0000235:-16724 | Msa1335250:CDS |
| TGTCAAAGGGTGTCCGATAA+AGG | 0.374676 | tig0000235:+16711 | None:intergenic |
| CTTGATCTTGTGATTGACTT+GGG | 0.374945 | tig0000235:+18193 | None:intergenic |
| TTGTTATAAAGTAATGAATC+TGG | 0.377844 | tig0000235:-16025 | Msa1335250:three_prime_UTR |
| CCGGCCACAACATGTTCCTT+TGG | 0.380452 | tig0000235:-16764 | Msa1335250:CDS |
| TTACCCGCTATGTCCAATTC+TGG | 0.389733 | tig0000235:-18884 | Msa1335250:exon |
| TTCGGTCTTCTTGTGGTGAC+CGG | 0.394228 | tig0000235:+16592 | None:intergenic |
| CAAGAAGGAGAATGAGACTA+TGG | 0.395809 | tig0000235:-18174 | Msa1335250:CDS |
| CGGGACTTGAGCAAGCATAT+TGG | 0.396798 | tig0000235:-16940 | Msa1335250:CDS |
| CAGAAGATTCTCAACCTTCA+TGG | 0.399623 | tig0000235:+16173 | None:intergenic |
| AGTACAATTGTTTGAAGCAT+TGG | 0.400483 | tig0000235:+17011 | None:intergenic |
| GATGAGAGGTAAACATGGTT+TGG | 0.401450 | tig0000235:-16076 | Msa1335250:three_prime_UTR |
| TCCTCTAGAACCCCAACAAA+TGG | 0.402935 | tig0000235:+18101 | None:intergenic |
| ACACTTGTTTCTTGCTCATC+CGG | 0.406276 | tig0000235:-17372 | Msa1335250:CDS |
| AAGGCATCTGCCGCTGGTTT+AGG | 0.407748 | tig0000235:-19052 | Msa1335250:five_prime_UTR |
| TCAGCACTCCTAAGCTTTGA+TGG | 0.409690 | tig0000235:+19624 | None:intergenic |
| TGTTCCAATGCACTAACTTC+AGG | 0.415034 | tig0000235:+17345 | None:intergenic |
| GCTGAGACTGCTTGTGAGAA+TGG | 0.416600 | tig0000235:-18254 | Msa1335250:CDS |
| AACATGTTGTGGCCGGTAGC+TGG | 0.418779 | tig0000235:+16771 | None:intergenic |
| TAATCACATGAGCCTTCTCT+TGG | 0.419630 | tig0000235:-16121 | Msa1335250:three_prime_UTR |
| TGGTGGAGAACTGCTTGAAC+CGG | 0.421405 | tig0000235:+18367 | None:intergenic |
| TGAGAATGGGACTTCATTAA+CGG | 0.426447 | tig0000235:-18240 | Msa1335250:CDS |
| TTATTCGATGTCCCATTTGT+TGG | 0.427856 | tig0000235:-18113 | Msa1335250:CDS |
| ACAGAGAATGGCCTGGCAAA+TGG | 0.429162 | tig0000235:-18554 | Msa1335250:CDS |
| CTACTGAATACTATTGTAAG+AGG | 0.437136 | tig0000235:+16406 | None:intergenic |
| AGGCTTATTCTTCTCTGAAA+AGG | 0.437706 | tig0000235:-18511 | Msa1335250:CDS |
| TCTTGATCTTGTGATTGACT+TGG | 0.440780 | tig0000235:+18192 | None:intergenic |
| AACTGCTTGAACCGGGAAGC+TGG | 0.441560 | tig0000235:+18375 | None:intergenic |
| AGATGCCTTTGCCTTCTCAA+TGG | 0.441890 | tig0000235:+19066 | None:intergenic |
| AGAGGAATACAAGCTATAAC+AGG | 0.446161 | tig0000235:+16424 | None:intergenic |
| ATCGTGACCAACAGCAGAAC+TGG | 0.446355 | tig0000235:+17251 | None:intergenic |
| AATACAATACAAAACTGAAA+TGG | 0.449573 | tig0000235:+15884 | None:intergenic |
| CTCTTCTGACTGTCTGTGAC+CGG | 0.451756 | tig0000235:+16480 | None:intergenic |
| ATCCCTGATAACTGATTTCA+CGG | 0.452899 | tig0000235:+16322 | None:intergenic |
| CGTTTCATATCTGGAGTTAA+CGG | 0.453883 | tig0000235:+16861 | None:intergenic |
| CGGAAGTTGTCCTCGTTGAC+CGG | 0.454649 | tig0000235:-16499 | Msa1335250:CDS |
| GCTCCAGAATTGTCACAATC+TGG | 0.454653 | tig0000235:-18803 | Msa1335250:CDS |
| CCATTGTAGAGGAGAGACTT+TGG | 0.456647 | tig0000235:+15939 | None:intergenic |
| TTCATTAACGGTTCATGACC+AGG | 0.456852 | tig0000235:-18228 | Msa1335250:CDS |
| CACTACACTTTCTGCCATGA+AGG | 0.457127 | tig0000235:-16187 | Msa1335250:three_prime_UTR |
| CTTTACAGCCATCAAAGCTT+AGG | 0.457348 | tig0000235:-19632 | Msa1335250:five_prime_UTR |
| CTCTGTCATTGAGTCGTTCA+GGG | 0.458384 | tig0000235:+18571 | None:intergenic |
| TGAGCTAGAGAGTGCTCACC+TGG | 0.460676 | tig0000235:-18978 | Msa1335250:five_prime_UTR |
| ACGGTAAGGGTGACTTGTCC+AGG | 0.466120 | tig0000235:+18960 | None:intergenic |
| AGTTAACGGCGAAGCGTGAC+TGG | 0.469047 | tig0000235:+16875 | None:intergenic |
| CTAAAACCTTTGTCAAAGTC+CGG | 0.471803 | tig0000235:+18435 | None:intergenic |
| TTACAGAAGTTCCATTTGCC+AGG | 0.474379 | tig0000235:+18543 | None:intergenic |
| TTCTCCACCATGCGGGATAA+CGG | 0.474530 | tig0000235:-18354 | Msa1335250:CDS |
| CCCATTTGTTGGGGTTCTAG+AGG | 0.475575 | tig0000235:-18102 | Msa1335250:CDS |
| GTCAGAAACAGAAAGTTGAT+TGG | 0.476992 | tig0000235:-17050 | Msa1335250:CDS |
| GATAAAATGTTGAGCGGCAT+GGG | 0.477166 | tig0000235:-16661 | Msa1335250:CDS |
| TGGTGTAGTGTCAAATAGAA+AGG | 0.477954 | tig0000235:-18639 | Msa1335250:CDS |
| CGATAAAATGTTGAGCGGCA+TGG | 0.484047 | tig0000235:-16662 | Msa1335250:CDS |
| TTGTACTCTCATGCTGGACT+TGG | 0.484489 | tig0000235:-15977 | Msa1335250:three_prime_UTR |
| TCCAATACCTCAACTGTCAA+AGG | 0.489297 | tig0000235:+16697 | None:intergenic |
| CTGAGACTGCTTGTGAGAAT+GGG | 0.490373 | tig0000235:-18253 | Msa1335250:CDS |
| AGTGTCAAATAGAAAGGGAC+AGG | 0.492213 | tig0000235:-18633 | Msa1335250:CDS |
| CCCTTGAGCTTATCTACCAC+CGG | 0.492367 | tig0000235:+16448 | None:intergenic |
| GCTGTTGGTCACGATATTGT+TGG | 0.494575 | tig0000235:-17243 | Msa1335250:CDS |
| CAAGTCTCGAGAAAATATAT+CGG | 0.497219 | tig0000235:-17141 | Msa1335250:CDS |
| TTGATCTTGTGATTGACTTG+GGG | 0.501124 | tig0000235:+18194 | None:intergenic |
| TTTGAAGAACCTAATCATAA+CGG | 0.501463 | tig0000235:-18773 | Msa1335250:CDS |
| AACGACTCAATGACAGAGAA+TGG | 0.502970 | tig0000235:-18566 | Msa1335250:CDS |
| TGATCTCTTCGGTCTTCTTG+TGG | 0.505448 | tig0000235:+16585 | None:intergenic |
| CATGCCTGAAGTTAGTGCAT+TGG | 0.505981 | tig0000235:-17349 | Msa1335250:CDS |
| TTGTGCAGTGAAGCCAAAAC+CGG | 0.506599 | tig0000235:-16611 | Msa1335250:CDS |
| AGCAAAACTGTAATAGTGAG+TGG | 0.506605 | tig0000235:-15911 | Msa1335250:three_prime_UTR |
| ATCAACTTTCTGTTTCTGAC+CGG | 0.511769 | tig0000235:+17053 | None:intergenic |
| ATGGGAGGCGACGTGGAAGT+TGG | 0.512018 | tig0000235:-16643 | Msa1335250:CDS |
| TGATCTGAAGCATAACGGTA+AGG | 0.513420 | tig0000235:+18946 | None:intergenic |
| AAGGCAAAGGCATCTGCCGC+TGG | 0.514727 | tig0000235:-19058 | Msa1335250:five_prime_UTR |
| GCGAAGCGTGACTGGCGATA+AGG | 0.514906 | tig0000235:+16883 | None:intergenic |
| TGCACTAACTTCAGGCATGC+CGG | 0.515126 | tig0000235:+17353 | None:intergenic |
| AGAAAATATATCGGCATGGA+TGG | 0.517263 | tig0000235:-17132 | Msa1335250:CDS |
| ATGGAAATATCAGGGCTAGT+TGG | 0.517975 | tig0000235:-18155 | Msa1335250:CDS |
| CCTCTAGAACCCCAACAAAT+GGG | 0.521032 | tig0000235:+18102 | None:intergenic |
| TTTGACAGTTGAGGTATTGG+AGG | 0.523252 | tig0000235:-16695 | Msa1335250:CDS |
| TCTCATGCTGGACTTGGACT+TGG | 0.525028 | tig0000235:-15971 | Msa1335250:three_prime_UTR |
| TAGATGTTGTACTCTCATGC+TGG | 0.525078 | tig0000235:-15983 | Msa1335250:three_prime_UTR |
| AGGCATTGAGTGGGCAGGCA+CGG | 0.527471 | tig0000235:-16375 | Msa1335250:CDS |
| GTCAGAAGAGAAGAGAAAAC+CGG | 0.531813 | tig0000235:-16467 | Msa1335250:CDS |
| GGCAGTGAAGTATGCTCGAA+GGG | 0.533104 | tig0000235:-19023 | Msa1335250:five_prime_UTR |
| GGTAGAAACTGTAGTTCTGA+TGG | 0.534918 | tig0000235:-16826 | Msa1335250:CDS |
| AGCGAACACGGTGAACCAGC+TGG | 0.535550 | tig0000235:-18911 | Msa1335250:five_prime_UTR |
| TGGTCTAGTGTACCTGGAGT+GGG | 0.537353 | tig0000235:+18071 | None:intergenic |
| GGTCACGATATTGTTGGTGA+TGG | 0.538293 | tig0000235:-17237 | Msa1335250:CDS |
| GGTTGTACCAGTTCTGCTGT+TGG | 0.538424 | tig0000235:-17258 | Msa1335250:CDS |
| GGTGTAGTGTCAAATAGAAA+GGG | 0.539097 | tig0000235:-18638 | Msa1335250:CDS |
| GAAGGAGTGAAGCGAATGAA+AGG | 0.541607 | tig0000235:-18680 | Msa1335250:CDS |
| TCGACGCCGGACTTTGACAA+AGG | 0.543842 | tig0000235:-18441 | Msa1335250:CDS |
| TTGTTAATTTCCTTTGCAGA+AGG | 0.548115 | tig0000235:+18290 | None:intergenic |
| AACTTCTGTAAACGTTGGTA+AGG | 0.550476 | tig0000235:-18531 | Msa1335250:CDS |
| CTCTGTAAATAATGTAACAT+TGG | 0.551025 | tig0000235:-16098 | Msa1335250:three_prime_UTR |
| CCAATACCTCAACTGTCAAA+GGG | 0.551489 | tig0000235:+16698 | None:intergenic |
| CGGACACCCTTTGACAGTTG+AGG | 0.551530 | tig0000235:-16704 | Msa1335250:CDS |
| TTCCATCTATGCATGGAAGA+AGG | 0.552723 | tig0000235:-18739 | Msa1335250:CDS |
| AAATGAGGCATTGAGTGGGC+AGG | 0.558447 | tig0000235:-16380 | Msa1335250:CDS |
| ATAGCGGGTAATTCTCCAGC+TGG | 0.558770 | tig0000235:+18896 | None:intergenic |
| CTCTTACAATAGTATTCAGT+AGG | 0.559633 | tig0000235:-16405 | Msa1335250:CDS |
| ATTCGATGTCCCATTTGTTG+GGG | 0.559772 | tig0000235:-18111 | Msa1335250:CDS |
| AGTTCAAAGTGGCAGTCGAA+AGG | 0.561994 | tig0000235:-17201 | Msa1335250:CDS |
| TTAAAGATTCCATCTATGCA+TGG | 0.562022 | tig0000235:-18746 | Msa1335250:CDS |
| ATAATGTAACATTGGATGAG+AGG | 0.563292 | tig0000235:-16090 | Msa1335250:three_prime_UTR |
| TCAGAAGACGATGGAACTGA+AGG | 0.564056 | tig0000235:-18698 | Msa1335250:CDS |
| ACAGGAACAAGGAACTCAGA+TGG | 0.565739 | tig0000235:-17090 | Msa1335250:CDS |
| AAAGTTGATTGGAACGGCAC+AGG | 0.566194 | tig0000235:-17039 | Msa1335250:CDS |
| TTTGTGCTTTCTGATATACT+AGG | 0.566669 | tig0000235:-19658 | Msa1335250:five_prime_UTR |
| GGACTTGAGCAAGCATATTG+GGG | 0.570878 | tig0000235:-16938 | Msa1335250:CDS |
| CGTTAACTCCAGATATGAAA+CGG | 0.572629 | tig0000235:-16860 | Msa1335250:CDS |
| GTTGCTGAAGGTCAAGCAGA+AGG | 0.573041 | tig0000235:-16967 | Msa1335250:CDS |
| TCACCAGAATTGGACATAGC+GGG | 0.573877 | tig0000235:+18881 | None:intergenic |
| AATGGGAGCAAGAATGAAGC+TGG | 0.574710 | tig0000235:-17279 | Msa1335250:CDS |
| ATGGTCTAGTGTACCTGGAG+TGG | 0.577258 | tig0000235:+18070 | None:intergenic |
| ACATGCTGAGCTATCTCAGT+TGG | 0.577348 | tig0000235:+18602 | None:intergenic |
| ATTTGTTGGGGTTCTAGAGG+AGG | 0.577783 | tig0000235:-18099 | Msa1335250:CDS |
| AGTGGCAGTCGAAAGGGAAG+AGG | 0.577792 | tig0000235:-17194 | Msa1335250:CDS |
| TTCAAAGAAACCTTCTGCAA+AGG | 0.578066 | tig0000235:-18300 | Msa1335250:CDS |
| GTAGAAACTGTAGTTCTGAT+GGG | 0.578105 | tig0000235:-16825 | Msa1335250:CDS |
| CAAGCAGTTCTCCACCATGC+GGG | 0.578455 | tig0000235:-18361 | Msa1335250:CDS |
| GGACTTGAGGACCTTGGCAA+TGG | 0.578990 | tig0000235:-18659 | Msa1335250:CDS |
| GCTATGTCCAATTCTGGTGA+TGG | 0.579281 | tig0000235:-18878 | Msa1335250:CDS |
| GGTGGAGAACTGCTTGAACC+GGG | 0.580515 | tig0000235:+18368 | None:intergenic |
| AGTATTCAGTAGGATAAATG+AGG | 0.580963 | tig0000235:-16395 | Msa1335250:CDS |
| GATCTGAAGCATAACGGTAA+GGG | 0.581691 | tig0000235:+18947 | None:intergenic |
| TAGAAGTTAAATCCAGCTAC+CGG | 0.582576 | tig0000235:-16783 | Msa1335250:CDS |
| CATTGGATGAGAGGTAAACA+TGG | 0.583472 | tig0000235:-16081 | Msa1335250:three_prime_UTR |
| GTGAAATCAGTTATCAGGGA+TGG | 0.583720 | tig0000235:-16320 | Msa1335250:exon |
| CCAAAGGAACATGTTGTGGC+CGG | 0.585729 | tig0000235:+16764 | None:intergenic |
| GAAACCAAAGGAACATGTTG+TGG | 0.585862 | tig0000235:+16760 | None:intergenic |
| GATGGATTATGTGAAGGTGC+CGG | 0.586386 | tig0000235:-17072 | Msa1335250:CDS |
| TTGCTGAAGGTCAAGCAGAA+GGG | 0.586648 | tig0000235:-16966 | Msa1335250:CDS |
| AGGATAAATGAGGCATTGAG+TGG | 0.587074 | tig0000235:-16385 | Msa1335250:CDS |
| TGCCGCTGGTTTAGGCAAGA+AGG | 0.587990 | tig0000235:-19044 | Msa1335250:five_prime_UTR |
| ATGAAAGGACTTGAGGACCT+TGG | 0.588385 | tig0000235:-18665 | Msa1335250:CDS |
| GAGGAGGAGAAACCCACTCC+AGG | 0.588496 | tig0000235:-18083 | Msa1335250:intron |
| ACCCGTGAAATCAGTTATCA+GGG | 0.589475 | tig0000235:-16324 | Msa1335250:exon |
| TTTACATCCGTTATCCCGCA+TGG | 0.589916 | tig0000235:+18347 | None:intergenic |
| ACCGGTGGTAGATAAGCTCA+AGG | 0.590018 | tig0000235:-16449 | Msa1335250:CDS |
| GTTCAAAGTGGCAGTCGAAA+GGG | 0.591153 | tig0000235:-17200 | Msa1335250:CDS |
| CTCAATGACAGAGAATGGCC+TGG | 0.591428 | tig0000235:-18561 | Msa1335250:CDS |
| AAAATGTTGAGCGGCATGGG+AGG | 0.593325 | tig0000235:-16658 | Msa1335250:CDS |
| ACAGTTGAGGTATTGGAGGA+CGG | 0.596949 | tig0000235:-16691 | Msa1335250:CDS |
| GGAAGCTGGTCACAAATGAC+AGG | 0.596959 | tig0000235:+18389 | None:intergenic |
| CTCGAGAAAATATATCGGCA+TGG | 0.597250 | tig0000235:-17136 | Msa1335250:CDS |
| AACTGCAAGACAGTTGCTGA+AGG | 0.597808 | tig0000235:-16979 | Msa1335250:CDS |
| AACTCAGATGGATTATGTGA+AGG | 0.600770 | tig0000235:-17078 | Msa1335250:CDS |
| TTATTTACAGAGCCAAGAGA+AGG | 0.603843 | tig0000235:+16109 | None:intergenic |
| GCAAAACTGTAATAGTGAGT+GGG | 0.604915 | tig0000235:-15910 | Msa1335250:three_prime_UTR |
| TGATAACTGATTTCACGGGT+TGG | 0.608650 | tig0000235:+16327 | None:intergenic |
| AATGACAGGAACTGATACCA+TGG | 0.609457 | tig0000235:+18403 | None:intergenic |
| CTTGGGGAATATCGCTACCC+TGG | 0.612880 | tig0000235:+18210 | None:intergenic |
| TTATCTGATCTGAAGCATAA+CGG | 0.613891 | tig0000235:+18941 | None:intergenic |
| GAGCGGCATGGGAGGCGACG+TGG | 0.617433 | tig0000235:-16650 | Msa1335250:CDS |
| GATAAATCTGACAGCGAACA+CGG | 0.618599 | tig0000235:-18923 | Msa1335250:five_prime_UTR |
| CCAAAGTCTCTCCTCTACAA+TGG | 0.619763 | tig0000235:-15939 | Msa1335250:three_prime_UTR |
| AGTCAATCACAAGATCAAGA+AGG | 0.619863 | tig0000235:-18189 | Msa1335250:CDS |
| GTATGCTGAAGCCATTGAGA+AGG | 0.624473 | tig0000235:-19077 | Msa1335250:five_prime_UTR |
| GAAGCGAATGAAAGGACTTG+AGG | 0.627675 | tig0000235:-18672 | Msa1335250:CDS |
| AGGCAGTGAAGTATGCTCGA+AGG | 0.629741 | tig0000235:-19024 | Msa1335250:five_prime_UTR |
| TCTCTGAGGTGGTTCTGCAG+TGG | 0.630375 | tig0000235:+16912 | None:intergenic |
| ATGAGACTATGGAAATATCA+GGG | 0.630550 | tig0000235:-18163 | Msa1335250:CDS |
| GGATAAATGAGGCATTGAGT+GGG | 0.631648 | tig0000235:-16384 | Msa1335250:CDS |
| ATATCAGAAAGCACAAAACA+AGG | 0.631885 | tig0000235:+19664 | None:intergenic |
| TCCCTGATAACTGATTTCAC+GGG | 0.638523 | tig0000235:+16323 | None:intergenic |
| AAACAGAAAGTTGATTGGAA+CGG | 0.641692 | tig0000235:-17045 | Msa1335250:CDS |
| TTGACACTACACCATTGCCA+AGG | 0.646697 | tig0000235:+18648 | None:intergenic |
| AATGGAACTTCTGTAAACGT+TGG | 0.647211 | tig0000235:-18536 | Msa1335250:CDS |
| TGAAGCCATTGAGAAGGCAA+AGG | 0.651915 | tig0000235:-19071 | Msa1335250:five_prime_UTR |
| ATGCTTATTTAACAGGAACA+AGG | 0.654411 | tig0000235:-17101 | Msa1335250:CDS |
| GAAAAGGAAGAGATCACAAG+TGG | 0.655116 | tig0000235:-18495 | Msa1335250:CDS |
| TAAGGAAGTGATCTCTGAGG+TGG | 0.659838 | tig0000235:+16901 | None:intergenic |
| CCTAATGATTCAGAAGACGA+TGG | 0.661790 | tig0000235:-18707 | Msa1335250:CDS |
| TCAGAACTACAGTTTCTACC+AGG | 0.663452 | tig0000235:+16829 | None:intergenic |
| TCTCTTGCGAGTAAATTGAG+TGG | 0.666579 | tig0000235:-16739 | Msa1335250:CDS |
| TGCCTTCTTGCCTAAACCAG+CGG | 0.667692 | tig0000235:+19042 | None:intergenic |
| TCATTAACGGTTCATGACCA+GGG | 0.669188 | tig0000235:-18227 | Msa1335250:CDS |
| GATGAGCAAGAAACAAGTGT+GGG | 0.670390 | tig0000235:+17375 | None:intergenic |
| CAATTCTGGTGATGGCAATG+AGG | 0.675486 | tig0000235:-18870 | Msa1335250:CDS |
| CATTGCGATAAAATGTTGAG+CGG | 0.679370 | tig0000235:-16667 | Msa1335250:CDS |
| TCAAGCAGTTCTCCACCATG+CGG | 0.683071 | tig0000235:-18362 | Msa1335250:CDS |
| TATGTATCTATGGCATGACA+AGG | 0.684921 | tig0000235:+15858 | None:intergenic |
| CCGGTGGTAGATAAGCTCAA+GGG | 0.687432 | tig0000235:-16448 | Msa1335250:CDS |
| ATCACCAGAATTGGACATAG+CGG | 0.690086 | tig0000235:+18880 | None:intergenic |
| AGAAGAGAAGAGAAAACCGG+TGG | 0.691650 | tig0000235:-16464 | Msa1335250:CDS |
| ACATCCGTTATCCCGCATGG+TGG | 0.691702 | tig0000235:+18350 | None:intergenic |
| CTGTCTGTGACCGGTCAACG+AGG | 0.695873 | tig0000235:+16489 | None:intergenic |
| GACTTGAGCAAGCATATTGG+GGG | 0.696529 | tig0000235:-16937 | Msa1335250:CDS |
| GTGTCAAATAGAAAGGGACA+GGG | 0.699218 | tig0000235:-18632 | Msa1335250:CDS |
| CGATAAGGAAGTGATCTCTG+AGG | 0.704346 | tig0000235:+16898 | None:intergenic |
| GGATGAGCAAGAAACAAGTG+TGG | 0.713154 | tig0000235:+17374 | None:intergenic |
| TTACTCGCAAGAGAAACCAA+AGG | 0.714513 | tig0000235:+16748 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGTAATCATAAATGAAA+AGG | + | tig0000235:16271-16290 | None:intergenic | 15.0% |
| !! | TATTGTAATATTGTTTAGTT+TGG | - | tig0000235:17671-17690 | Msa1335250:intron | 15.0% |
| !!! | TGTATGTTTTAAAATTTACA+TGG | + | tig0000235:17744-17763 | None:intergenic | 15.0% |
| !! | TTAAGACATAAAAGTAAAAA+TGG | - | tig0000235:18374-18393 | Msa1335250:CDS | 15.0% |
| !!! | GAAAAAAAGCATTCATATAA+AGG | + | tig0000235:16092-16111 | None:intergenic | 20.0% |
| !!! | TTAGATAAATGTTTTTCACT+CGG | - | tig0000235:16196-16215 | Msa1335250:three_prime_UTR | 20.0% |
| !! | AACTAAAACTAAACATTACA+AGG | + | tig0000235:16248-16267 | None:intergenic | 20.0% |
| !! | TTGTTATAAAGTAATGAATC+TGG | - | tig0000235:19517-19536 | Msa1335250:intron | 20.0% |
| !! | AATACAATACAAAACTGAAA+TGG | + | tig0000235:19661-19680 | None:intergenic | 20.0% |
| !! | AACAATTCCAACCATATTTT+GGG | + | tig0000235:15960-15979 | None:intergenic | 25.0% |
| !! | AAACAATTCCAACCATATTT+TGG | + | tig0000235:15961-15980 | None:intergenic | 25.0% |
| ! | GAGTGAAAAACATTTATCTA+AGG | + | tig0000235:16197-16216 | None:intergenic | 25.0% |
| !! | TAGATAAATGTTTTTCACTC+GGG | - | tig0000235:16197-16216 | Msa1335250:three_prime_UTR | 25.0% |
| ! | TTTATGATTACTTTACGTTC+AGG | - | tig0000235:16276-16295 | Msa1335250:three_prime_UTR | 25.0% |
| ! | ACATACAAATTCAAGAATCA+CGG | + | tig0000235:16324-16343 | None:intergenic | 25.0% |
| !! | TTGAATTTGTATGTTGTTTG+AGG | - | tig0000235:16330-16349 | Msa1335250:exon | 25.0% |
| !!! | TGTTTGCATAAGTTTGATTT+TGG | - | tig0000235:16367-16386 | Msa1335250:CDS | 25.0% |
| ! | ATAATCTTGAAAAATCGAAG+AGG | - | tig0000235:16419-16438 | Msa1335250:CDS | 25.0% |
| ! | TAATCTTGAAAAATCGAAGA+GGG | - | tig0000235:16420-16439 | Msa1335250:CDS | 25.0% |
| ! | TTTGAAGAACCTAATCATAA+CGG | - | tig0000235:16769-16788 | Msa1335250:CDS | 25.0% |
| ! | TTTAAAGAACCGTTATGATT+AGG | + | tig0000235:16781-16800 | None:intergenic | 25.0% |
| ! | TCAATATTTGCAAGCAAAAA+GGG | + | tig0000235:17556-17575 | None:intergenic | 25.0% |
| ! | ATCAATATTTGCAAGCAAAA+AGG | + | tig0000235:17557-17576 | None:intergenic | 25.0% |
| ! | AAATCTAACATGAAACCAAA+AGG | + | tig0000235:17609-17628 | None:intergenic | 25.0% |
| ! | AAATCTAACATGAAACCAAA+AGG | + | tig0000235:17609-17628 | None:intergenic | 25.0% |
| ! | TGCTCAAGTGAAAAATTAAA+GGG | + | tig0000235:17816-17835 | None:intergenic | 25.0% |
| ! | TTGCTCAAGTGAAAAATTAA+AGG | + | tig0000235:17817-17836 | None:intergenic | 25.0% |
| ! | GAAATTACAACAATAATGTG+AGG | + | tig0000235:18130-18149 | None:intergenic | 25.0% |
| ! | TCTTCAAAGTCAAAAAAATC+TGG | - | tig0000235:19001-19020 | Msa1335250:five_prime_UTR | 25.0% |
| ! | CTTCAAAGTCAAAAAAATCT+GGG | - | tig0000235:19002-19021 | Msa1335250:five_prime_UTR | 25.0% |
| !! | TAGTACTTCATAAGAGATTT+TGG | - | tig0000235:19282-19301 | Msa1335250:intron | 25.0% |
| !!! | ACAATTTTCAAGACATTTGT+AGG | - | tig0000235:19393-19412 | Msa1335250:intron | 25.0% |
| ! | CTCTGTAAATAATGTAACAT+TGG | - | tig0000235:19444-19463 | Msa1335250:intron | 25.0% |
| ! | TTAGGTAATTAACCTGATAT+TGG | - | tig0000235:19492-19511 | Msa1335250:intron | 25.0% |
| ! | TAGGTAATTAACCTGATATT+GGG | - | tig0000235:19493-19512 | Msa1335250:intron | 25.0% |
| ! | TTTATAACAAACCCAATATC+AGG | + | tig0000235:19507-19526 | None:intergenic | 25.0% |
| ! | ATATCAGAAAGCACAAAACA+AGG | + | tig0000235:15881-15900 | None:intergenic | 30.0% |
| TTTGTGCTTTCTGATATACT+AGG | - | tig0000235:15884-15903 | Msa1335250:three_prime_UTR | 30.0% | |
| !! | TTTTGGGAGAAGCATAAATT+AGG | + | tig0000235:15944-15963 | None:intergenic | 30.0% |
| TTTATGCTTCTCCCAAAATA+TGG | - | tig0000235:15946-15965 | Msa1335250:three_prime_UTR | 30.0% | |
| !! | ATTTTGGAAACACTTCTTTG+TGG | - | tig0000235:16383-16402 | Msa1335250:CDS | 30.0% |
| ! | TTATCTGATCTGAAGCATAA+CGG | + | tig0000235:16604-16623 | None:intergenic | 30.0% |
| TTAAAGATTCCATCTATGCA+TGG | - | tig0000235:16796-16815 | Msa1335250:CDS | 30.0% | |
| !! | ATAACGGATGTAAAGATTTC+AGG | - | tig0000235:17204-17223 | Msa1335250:CDS | 30.0% |
| TTGTTAATTTCCTTTGCAGA+AGG | + | tig0000235:17255-17274 | None:intergenic | 30.0% | |
| AATGAGACTATGGAAATATC+AGG | - | tig0000235:17378-17397 | Msa1335250:CDS | 30.0% | |
| ATGAGACTATGGAAATATCA+GGG | - | tig0000235:17379-17398 | Msa1335250:CDS | 30.0% | |
| ATGATTCGTTACAGTTTCTT+TGG | - | tig0000235:17766-17785 | Msa1335250:intron | 30.0% | |
| TGATTCGTTACAGTTTCTTT+GGG | - | tig0000235:17767-17786 | Msa1335250:intron | 30.0% | |
| ! | TTCAGATAAGTTTTCTTCTG+CGG | + | tig0000235:17860-17879 | None:intergenic | 30.0% |
| AAATTTCTTCTTCAAGCTCT+AGG | - | tig0000235:17991-18010 | Msa1335250:intron | 30.0% | |
| AAGAAATATGAACGAACTTG+GGG | + | tig0000235:18066-18085 | None:intergenic | 30.0% | |
| GAAGAAATATGAACGAACTT+GGG | + | tig0000235:18067-18086 | None:intergenic | 30.0% | |
| AGAAGAAATATGAACGAACT+TGG | + | tig0000235:18068-18087 | None:intergenic | 30.0% | |
| TTGTTGTAATTTCTTCTGCT+AGG | - | tig0000235:18137-18156 | Msa1335250:CDS | 30.0% | |
| ! | AAGCTTTTGCATTGAGAAAT+GGG | - | tig0000235:18246-18265 | Msa1335250:CDS | 30.0% |
| CAGAAAAAGATAGTTCAAAG+TGG | - | tig0000235:18330-18349 | Msa1335250:CDS | 30.0% | |
| CAAGTCTCGAGAAAATATAT+CGG | - | tig0000235:18401-18420 | Msa1335250:CDS | 30.0% | |
| GAATCTGATGCTTATTTAAC+AGG | - | tig0000235:18434-18453 | Msa1335250:CDS | 30.0% | |
| ATGCTTATTTAACAGGAACA+AGG | - | tig0000235:18441-18460 | Msa1335250:CDS | 30.0% | |
| ! | AAACAGAAAGTTGATTGGAA+CGG | - | tig0000235:18497-18516 | Msa1335250:CDS | 30.0% |
| ! | AGTACAATTGTTTGAAGCAT+TGG | + | tig0000235:18534-18553 | None:intergenic | 30.0% |
| GGCTGTTGAATAAAAAGATT+CGG | - | tig0000235:19023-19042 | Msa1335250:five_prime_UTR | 30.0% | |
| CTACTGAATACTATTGTAAG+AGG | + | tig0000235:19139-19158 | None:intergenic | 30.0% | |
| CTCTTACAATAGTATTCAGT+AGG | - | tig0000235:19137-19156 | Msa1335250:intron | 30.0% | |
| AGTATTCAGTAGGATAAATG+AGG | - | tig0000235:19147-19166 | Msa1335250:intron | 30.0% | |
| ATAATGTAACATTGGATGAG+AGG | - | tig0000235:19452-19471 | Msa1335250:intron | 30.0% | |
| !! | GTAAACATGGTTTGGTTATT+AGG | - | tig0000235:19474-19493 | Msa1335250:intron | 30.0% |
| AAGTAATGAATCTGGTTGTT+TGG | - | tig0000235:19525-19544 | Msa1335250:intron | 30.0% | |
| AGTAATGAATCTGGTTGTTT+GGG | - | tig0000235:19526-19545 | Msa1335250:intron | 30.0% | |
| CAGATGTTTGATACGAGATA+TGG | - | tig0000235:15998-16017 | Msa1335250:three_prime_UTR | 35.0% | |
| TTTGATACGAGATATGGATG+TGG | - | tig0000235:16004-16023 | Msa1335250:three_prime_UTR | 35.0% | |
| ATACCAGATTGTGACAATTC+TGG | + | tig0000235:16745-16764 | None:intergenic | 35.0% | |
| TGGTGTAGTGTCAAATAGAA+AGG | - | tig0000235:16903-16922 | Msa1335250:CDS | 35.0% | |
| GGTGTAGTGTCAAATAGAAA+GGG | - | tig0000235:16904-16923 | Msa1335250:CDS | 35.0% | |
| AATGGAACTTCTGTAAACGT+TGG | - | tig0000235:17006-17025 | Msa1335250:CDS | 35.0% | |
| AACTTCTGTAAACGTTGGTA+AGG | - | tig0000235:17011-17030 | Msa1335250:CDS | 35.0% | |
| ! | AGGCTTATTCTTCTCTGAAA+AGG | - | tig0000235:17031-17050 | Msa1335250:CDS | 35.0% |
| TGAAAAGAAAAAATCGACGC+CGG | - | tig0000235:17088-17107 | Msa1335250:CDS | 35.0% | |
| CTAAAACCTTTGTCAAAGTC+CGG | + | tig0000235:17110-17129 | None:intergenic | 35.0% | |
| TTCAAAGAAACCTTCTGCAA+AGG | - | tig0000235:17242-17261 | Msa1335250:CDS | 35.0% | |
| TGAGAATGGGACTTCATTAA+CGG | - | tig0000235:17302-17321 | Msa1335250:CDS | 35.0% | |
| !! | TTGATCTTGTGATTGACTTG+GGG | + | tig0000235:17351-17370 | None:intergenic | 35.0% |
| ! | CTTGATCTTGTGATTGACTT+GGG | + | tig0000235:17352-17371 | None:intergenic | 35.0% |
| TCTTGATCTTGTGATTGACT+TGG | + | tig0000235:17353-17372 | None:intergenic | 35.0% | |
| AGTCAATCACAAGATCAAGA+AGG | - | tig0000235:17353-17372 | Msa1335250:CDS | 35.0% | |
| TTATTCGATGTCCCATTTGT+TGG | - | tig0000235:17429-17448 | Msa1335250:intron | 35.0% | |
| TATTCGATGTCCCATTTGTT+GGG | - | tig0000235:17430-17449 | Msa1335250:intron | 35.0% | |
| AGAAGACACTAAGGAAATCA+TGG | + | tig0000235:17494-17513 | None:intergenic | 35.0% | |
| TAGAAGAGTAGAAGACACTA+AGG | + | tig0000235:17503-17522 | None:intergenic | 35.0% | |
| ! | CATTTACCAACTATGCCTTT+TGG | - | tig0000235:17591-17610 | Msa1335250:intron | 35.0% |
| ! | ATGAAACCAAAAGGCATAGT+TGG | + | tig0000235:17600-17619 | None:intergenic | 35.0% |
| TCAGTTTGCACACTACTATT+GGG | + | tig0000235:17964-17983 | None:intergenic | 35.0% | |
| ATCAGTTTGCACACTACTAT+TGG | + | tig0000235:17965-17984 | None:intergenic | 35.0% | |
| TATTTCTTCTTTGCTGCATC+AGG | - | tig0000235:18078-18097 | Msa1335250:intron | 35.0% | |
| ! | GAAGCTTTTGCATTGAGAAA+TGG | - | tig0000235:18245-18264 | Msa1335250:CDS | 35.0% |
| AGAAAATATATCGGCATGGA+TGG | - | tig0000235:18410-18429 | Msa1335250:CDS | 35.0% | |
| !! | AACTCAGATGGATTATGTGA+AGG | - | tig0000235:18464-18483 | Msa1335250:CDS | 35.0% |
| !! | ATCAACTTTCTGTTTCTGAC+CGG | + | tig0000235:18492-18511 | None:intergenic | 35.0% |
| ! | GTCAGAAACAGAAAGTTGAT+TGG | - | tig0000235:18492-18511 | Msa1335250:CDS | 35.0% |
| ! | CGTTTCATATCTGGAGTTAA+CGG | + | tig0000235:18684-18703 | None:intergenic | 35.0% |
| CGTTAACTCCAGATATGAAA+CGG | - | tig0000235:18682-18701 | Msa1335250:CDS | 35.0% | |
| ! | AAAATCTGCCGTTTCATATC+TGG | + | tig0000235:18693-18712 | None:intergenic | 35.0% |
| !! | GTAGAAACTGTAGTTCTGAT+GGG | - | tig0000235:18717-18736 | Msa1335250:CDS | 35.0% |
| TAGAAGTTAAATCCAGCTAC+CGG | - | tig0000235:18759-18778 | Msa1335250:CDS | 35.0% | |
| CATTGCGATAAAATGTTGAG+CGG | - | tig0000235:18875-18894 | Msa1335250:CDS | 35.0% | |
| GAAAAATGCGATGATCTCTT+CGG | + | tig0000235:18971-18990 | None:intergenic | 35.0% | |
| AGAGGAATACAAGCTATAAC+AGG | + | tig0000235:19121-19140 | None:intergenic | 35.0% | |
| ! | ATCCCTGATAACTGATTTCA+CGG | + | tig0000235:19223-19242 | None:intergenic | 35.0% |
| TTATTTACAGAGCCAAGAGA+AGG | + | tig0000235:19436-19455 | None:intergenic | 35.0% | |
| !! | TTTGCTTTTAGCCATTGTAG+AGG | + | tig0000235:19617-19636 | None:intergenic | 35.0% |
| AGCAAAACTGTAATAGTGAG+TGG | - | tig0000235:19631-19650 | Msa1335250:five_prime_UTR | 35.0% | |
| GCAAAACTGTAATAGTGAGT+GGG | - | tig0000235:19632-19651 | Msa1335250:five_prime_UTR | 35.0% | |
| CTTTACAGCCATCAAAGCTT+AGG | - | tig0000235:15910-15929 | Msa1335250:three_prime_UTR | 40.0% | |
| TGCTTCTCCCAAAATATGGT+TGG | - | tig0000235:15950-15969 | Msa1335250:three_prime_UTR | 40.0% | |
| AATCACGGTCGACAATTGAT+CGG | + | tig0000235:16309-16328 | None:intergenic | 40.0% | |
| AAACACTTCTTTGTGGTGCA+GGG | - | tig0000235:16390-16409 | Msa1335250:CDS | 40.0% | |
| ! | GATCTGAAGCATAACGGTAA+GGG | + | tig0000235:16598-16617 | None:intergenic | 40.0% |
| ! | TGATCTGAAGCATAACGGTA+AGG | + | tig0000235:16599-16618 | None:intergenic | 40.0% |
| GATAAATCTGACAGCGAACA+CGG | - | tig0000235:16619-16638 | Msa1335250:CDS | 40.0% | |
| ATCACCAGAATTGGACATAG+CGG | + | tig0000235:16665-16684 | None:intergenic | 40.0% | |
| TTCCATCTATGCATGGAAGA+AGG | - | tig0000235:16803-16822 | Msa1335250:CDS | 40.0% | |
| CCATCGTCTTCTGAATCATT+AGG | + | tig0000235:16838-16857 | None:intergenic | 40.0% | |
| CCTAATGATTCAGAAGACGA+TGG | - | tig0000235:16835-16854 | Msa1335250:CDS | 40.0% | |
| AGTGTCAAATAGAAAGGGAC+AGG | - | tig0000235:16909-16928 | Msa1335250:CDS | 40.0% | |
| GTGTCAAATAGAAAGGGACA+GGG | - | tig0000235:16910-16929 | Msa1335250:CDS | 40.0% | |
| AATAGAAAGGGACAGGGTTT+AGG | - | tig0000235:16916-16935 | Msa1335250:CDS | 40.0% | |
| AACGACTCAATGACAGAGAA+TGG | - | tig0000235:16976-16995 | Msa1335250:CDS | 40.0% | |
| TTACAGAAGTTCCATTTGCC+AGG | + | tig0000235:17002-17021 | None:intergenic | 40.0% | |
| GAAAAGGAAGAGATCACAAG+TGG | - | tig0000235:17047-17066 | Msa1335250:CDS | 40.0% | |
| AATGACAGGAACTGATACCA+TGG | + | tig0000235:17142-17161 | None:intergenic | 40.0% | |
| TTCATTAACGGTTCATGACC+AGG | - | tig0000235:17314-17333 | Msa1335250:CDS | 40.0% | |
| TCATTAACGGTTCATGACCA+GGG | - | tig0000235:17315-17334 | Msa1335250:CDS | 40.0% | |
| CAAGAAGGAGAATGAGACTA+TGG | - | tig0000235:17368-17387 | Msa1335250:CDS | 40.0% | |
| ! | ATGGAAATATCAGGGCTAGT+TGG | - | tig0000235:17387-17406 | Msa1335250:intron | 40.0% |
| ! | ATTCGATGTCCCATTTGTTG+GGG | - | tig0000235:17431-17450 | Msa1335250:intron | 40.0% |
| AAATCATGGTCTAGTGTACC+TGG | + | tig0000235:17480-17499 | None:intergenic | 40.0% | |
| !! | GCATAGTTGGTAAATGTGAG+GGG | + | tig0000235:17587-17606 | None:intergenic | 40.0% |
| !! | GGCATAGTTGGTAAATGTGA+GGG | + | tig0000235:17588-17607 | None:intergenic | 40.0% |
| !! | AGGCATAGTTGGTAAATGTG+AGG | + | tig0000235:17589-17608 | None:intergenic | 40.0% |
| ! | TTAGCACTAACTCTGCCTTT+TGG | - | tig0000235:17627-17646 | Msa1335250:intron | 40.0% |
| ! | GGTATGTTCTAAGCAGTGAA+TGG | + | tig0000235:17723-17742 | None:intergenic | 40.0% |
| AACCGAGCAAAGATCTCAAT+GGG | + | tig0000235:17903-17922 | None:intergenic | 40.0% | |
| AAACCGAGCAAAGATCTCAA+TGG | + | tig0000235:17904-17923 | None:intergenic | 40.0% | |
| ATATGAACGAACTTGGGGAA+AGG | + | tig0000235:18061-18080 | None:intergenic | 40.0% | |
| ! | CAGGTTAGCTATACTTATGC+TGG | - | tig0000235:18097-18116 | Msa1335250:CDS | 40.0% |
| GATGAGCAAGAAACAAGTGT+GGG | + | tig0000235:18170-18189 | None:intergenic | 40.0% | |
| ! | ACACTTGTTTCTTGCTCATC+CGG | - | tig0000235:18170-18189 | Msa1335250:CDS | 40.0% |
| TGTTCCAATGCACTAACTTC+AGG | + | tig0000235:18200-18219 | None:intergenic | 40.0% | |
| CTCGAGAAAATATATCGGCA+TGG | - | tig0000235:18406-18425 | Msa1335250:CDS | 40.0% | |
| ! | TATGAAACGGCAGATTTTCC+TGG | - | tig0000235:18695-18714 | Msa1335250:CDS | 40.0% |
| TCAGAACTACAGTTTCTACC+AGG | + | tig0000235:18716-18735 | None:intergenic | 40.0% | |
| !! | GGTAGAAACTGTAGTTCTGA+TGG | - | tig0000235:18716-18735 | Msa1335250:CDS | 40.0% |
| GAAACCAAAGGAACATGTTG+TGG | + | tig0000235:18785-18804 | None:intergenic | 40.0% | |
| TTACTCGCAAGAGAAACCAA+AGG | + | tig0000235:18797-18816 | None:intergenic | 40.0% | |
| TCTCTTGCGAGTAAATTGAG+TGG | - | tig0000235:18803-18822 | Msa1335250:CDS | 40.0% | |
| TTGAGTGGCAAAGCCTTTAT+CGG | - | tig0000235:18818-18837 | Msa1335250:CDS | 40.0% | |
| CCAATACCTCAACTGTCAAA+GGG | + | tig0000235:18847-18866 | None:intergenic | 40.0% | |
| TCCAATACCTCAACTGTCAA+AGG | + | tig0000235:18848-18867 | None:intergenic | 40.0% | |
| !! | TTTGACAGTTGAGGTATTGG+AGG | - | tig0000235:18847-18866 | Msa1335250:CDS | 40.0% |
| GATAAAATGTTGAGCGGCAT+GGG | - | tig0000235:18881-18900 | Msa1335250:exon | 40.0% | |
| ! | GATCATCGCATTTTTCTCGT+AGG | - | tig0000235:18975-18994 | Msa1335250:five_prime_UTR | 40.0% |
| GTCAGAAGAGAAGAGAAAAC+CGG | - | tig0000235:19075-19094 | Msa1335250:five_prime_UTR | 40.0% | |
| !! | AGGATAAATGAGGCATTGAG+TGG | - | tig0000235:19157-19176 | Msa1335250:intron | 40.0% |
| !! | GGATAAATGAGGCATTGAGT+GGG | - | tig0000235:19158-19177 | Msa1335250:intron | 40.0% |
| ! | TGATAACTGATTTCACGGGT+TGG | + | tig0000235:19218-19237 | None:intergenic | 40.0% |
| AACCCGTGAAATCAGTTATC+AGG | - | tig0000235:19217-19236 | Msa1335250:intron | 40.0% | |
| ACCCGTGAAATCAGTTATCA+GGG | - | tig0000235:19218-19237 | Msa1335250:intron | 40.0% | |
| ! | TCCCTGATAACTGATTTCAC+GGG | + | tig0000235:19222-19241 | None:intergenic | 40.0% |
| GTGAAATCAGTTATCAGGGA+TGG | - | tig0000235:19222-19241 | Msa1335250:intron | 40.0% | |
| CAGAAGATTCTCAACCTTCA+TGG | + | tig0000235:19372-19391 | None:intergenic | 40.0% | |
| TAATCACATGAGCCTTCTCT+TGG | - | tig0000235:19421-19440 | Msa1335250:intron | 40.0% | |
| CATTGGATGAGAGGTAAACA+TGG | - | tig0000235:19461-19480 | Msa1335250:intron | 40.0% | |
| GATGAGAGGTAAACATGGTT+TGG | - | tig0000235:19466-19485 | Msa1335250:intron | 40.0% | |
| TAGATGTTGTACTCTCATGC+TGG | - | tig0000235:19559-19578 | Msa1335250:intron | 40.0% | |
| ! | TCAGCACTCCTAAGCTTTGA+TGG | + | tig0000235:15921-15940 | None:intergenic | 45.0% |
| GGATGTGGAGAAATGTGTTG+AGG | - | tig0000235:16019-16038 | Msa1335250:three_prime_UTR | 45.0% | |
| GTCGACAATTGATCGGAAAC+TGG | + | tig0000235:16302-16321 | None:intergenic | 45.0% | |
| GAAACACTTCTTTGTGGTGC+AGG | - | tig0000235:16389-16408 | Msa1335250:CDS | 45.0% | |
| GTATGCTGAAGCCATTGAGA+AGG | - | tig0000235:16465-16484 | Msa1335250:CDS | 45.0% | |
| TGAAGCCATTGAGAAGGCAA+AGG | - | tig0000235:16471-16490 | Msa1335250:CDS | 45.0% | |
| AGATGCCTTTGCCTTCTCAA+TGG | + | tig0000235:16479-16498 | None:intergenic | 45.0% | |
| TTACCCGCTATGTCCAATTC+TGG | - | tig0000235:16658-16677 | Msa1335250:CDS | 45.0% | |
| TCACCAGAATTGGACATAGC+GGG | + | tig0000235:16664-16683 | None:intergenic | 45.0% | |
| GCTATGTCCAATTCTGGTGA+TGG | - | tig0000235:16664-16683 | Msa1335250:CDS | 45.0% | |
| CTCATTGCCATCACCAGAAT+TGG | + | tig0000235:16674-16693 | None:intergenic | 45.0% | |
| !! | CAATTCTGGTGATGGCAATG+AGG | - | tig0000235:16672-16691 | Msa1335250:CDS | 45.0% |
| GCTCCAGAATTGTCACAATC+TGG | - | tig0000235:16739-16758 | Msa1335250:CDS | 45.0% | |
| CTCCTTCTTCCATGCATAGA+TGG | + | tig0000235:16808-16827 | None:intergenic | 45.0% | |
| TCAGAAGACGATGGAACTGA+AGG | - | tig0000235:16844-16863 | Msa1335250:CDS | 45.0% | |
| GAAGGAGTGAAGCGAATGAA+AGG | - | tig0000235:16862-16881 | Msa1335250:CDS | 45.0% | |
| GAAGCGAATGAAAGGACTTG+AGG | - | tig0000235:16870-16889 | Msa1335250:CDS | 45.0% | |
| ATGAAAGGACTTGAGGACCT+TGG | - | tig0000235:16877-16896 | Msa1335250:CDS | 45.0% | |
| TTGACACTACACCATTGCCA+AGG | + | tig0000235:16897-16916 | None:intergenic | 45.0% | |
| ACATGCTGAGCTATCTCAGT+TGG | + | tig0000235:16943-16962 | None:intergenic | 45.0% | |
| CTCTGTCATTGAGTCGTTCA+GGG | + | tig0000235:16974-16993 | None:intergenic | 45.0% | |
| TCTCTGTCATTGAGTCGTTC+AGG | + | tig0000235:16975-16994 | None:intergenic | 45.0% | |
| !!! | GGTTTTAGAGAGTACTGCCA+TGG | - | tig0000235:17122-17141 | Msa1335250:CDS | 45.0% |
| TTTACATCCGTTATCCCGCA+TGG | + | tig0000235:17198-17217 | None:intergenic | 45.0% | |
| CTGAGACTGCTTGTGAGAAT+GGG | - | tig0000235:17289-17308 | Msa1335250:CDS | 45.0% | |
| !! | CCTCTAGAACCCCAACAAAT+GGG | + | tig0000235:17443-17462 | None:intergenic | 45.0% |
| !! | TCCTCTAGAACCCCAACAAA+TGG | + | tig0000235:17444-17463 | None:intergenic | 45.0% |
| !! | ATTTGTTGGGGTTCTAGAGG+AGG | - | tig0000235:17443-17462 | Msa1335250:intron | 45.0% |
| !! | AGTTGGTAAATGTGAGGGGA+AGG | + | tig0000235:17583-17602 | None:intergenic | 45.0% |
| AAAGATCTCAATGGGGAAGC+GGG | + | tig0000235:17895-17914 | None:intergenic | 45.0% | |
| CAAAGATCTCAATGGGGAAG+CGG | + | tig0000235:17896-17915 | None:intergenic | 45.0% | |
| TCCCCATTGAGATCTTTGCT+CGG | - | tig0000235:17898-17917 | Msa1335250:intron | 45.0% | |
| ACCGAGCAAAGATCTCAATG+GGG | + | tig0000235:17902-17921 | None:intergenic | 45.0% | |
| GGATGAGCAAGAAACAAGTG+TGG | + | tig0000235:18171-18190 | None:intergenic | 45.0% | |
| CATGCCTGAAGTTAGTGCAT+TGG | - | tig0000235:18193-18212 | Msa1335250:CDS | 45.0% | |
| AATGGGAGCAAGAATGAAGC+TGG | - | tig0000235:18263-18282 | Msa1335250:CDS | 45.0% | |
| GCTGTTGGTCACGATATTGT+TGG | - | tig0000235:18299-18318 | Msa1335250:CDS | 45.0% | |
| ! | GGTCACGATATTGTTGGTGA+TGG | - | tig0000235:18305-18324 | Msa1335250:CDS | 45.0% |
| AGTTCAAAGTGGCAGTCGAA+AGG | - | tig0000235:18341-18360 | Msa1335250:CDS | 45.0% | |
| GTTCAAAGTGGCAGTCGAAA+GGG | - | tig0000235:18342-18361 | Msa1335250:CDS | 45.0% | |
| ACAGGAACAAGGAACTCAGA+TGG | - | tig0000235:18452-18471 | Msa1335250:CDS | 45.0% | |
| !! | GATGGATTATGTGAAGGTGC+CGG | - | tig0000235:18470-18489 | Msa1335250:CDS | 45.0% |
| ! | AAAGTTGATTGGAACGGCAC+AGG | - | tig0000235:18503-18522 | Msa1335250:CDS | 45.0% |
| AACTGCAAGACAGTTGCTGA+AGG | - | tig0000235:18563-18582 | Msa1335250:CDS | 45.0% | |
| TTGCTGAAGGTCAAGCAGAA+GGG | - | tig0000235:18576-18595 | Msa1335250:CDS | 45.0% | |
| AAGGTCAAGCAGAAGGGTTT+CGG | - | tig0000235:18582-18601 | Msa1335250:CDS | 45.0% | |
| GGGACTTGAGCAAGCATATT+GGG | - | tig0000235:18603-18622 | Msa1335250:CDS | 45.0% | |
| GGACTTGAGCAAGCATATTG+GGG | - | tig0000235:18604-18623 | Msa1335250:CDS | 45.0% | |
| GACTTGAGCAAGCATATTGG+GGG | - | tig0000235:18605-18624 | Msa1335250:CDS | 45.0% | |
| ! | TAAGGAAGTGATCTCTGAGG+TGG | + | tig0000235:18644-18663 | None:intergenic | 45.0% |
| CGATAAGGAAGTGATCTCTG+AGG | + | tig0000235:18647-18666 | None:intergenic | 45.0% | |
| !! | TGTCAAAGGGTGTCCGATAA+AGG | + | tig0000235:18834-18853 | None:intergenic | 45.0% |
| CCCTTTGACAGTTGAGGTAT+TGG | - | tig0000235:18844-18863 | Msa1335250:CDS | 45.0% | |
| !! | ACAGTTGAGGTATTGGAGGA+CGG | - | tig0000235:18851-18870 | Msa1335250:CDS | 45.0% |
| CGATAAAATGTTGAGCGGCA+TGG | - | tig0000235:18880-18899 | Msa1335250:exon | 45.0% | |
| TTGTGCAGTGAAGCCAAAAC+CGG | - | tig0000235:18931-18950 | Msa1335250:five_prime_UTR | 45.0% | |
| TGATCTCTTCGGTCTTCTTG+TGG | + | tig0000235:18960-18979 | None:intergenic | 45.0% | |
| AGAAGAGAAGAGAAAACCGG+TGG | - | tig0000235:19078-19097 | Msa1335250:five_prime_UTR | 45.0% | |
| CACTACACTTTCTGCCATGA+AGG | - | tig0000235:19355-19374 | Msa1335250:intron | 45.0% | |
| TTGTACTCTCATGCTGGACT+TGG | - | tig0000235:19565-19584 | Msa1335250:intron | 45.0% | |
| CCATTGTAGAGGAGAGACTT+TGG | + | tig0000235:19606-19625 | None:intergenic | 45.0% | |
| CCAAAGTCTCTCCTCTACAA+TGG | - | tig0000235:19603-19622 | Msa1335250:five_prime_UTR | 45.0% | |
| ! | TCACTCGGGTGTCATGACAT+TGG | - | tig0000235:16211-16230 | Msa1335250:three_prime_UTR | 50.0% |
| CTTCTTTGTGGTGCAGGGAT+TGG | - | tig0000235:16395-16414 | Msa1335250:CDS | 50.0% | |
| TGCCTTCTTGCCTAAACCAG+CGG | + | tig0000235:16503-16522 | None:intergenic | 50.0% | |
| AGGCAGTGAAGTATGCTCGA+AGG | - | tig0000235:16518-16537 | Msa1335250:CDS | 50.0% | |
| GGCAGTGAAGTATGCTCGAA+GGG | - | tig0000235:16519-16538 | Msa1335250:CDS | 50.0% | |
| !! | ATAGCGGGTAATTCTCCAGC+TGG | + | tig0000235:16649-16668 | None:intergenic | 50.0% |
| CTCAATGACAGAGAATGGCC+TGG | - | tig0000235:16981-17000 | Msa1335250:CDS | 50.0% | |
| ACAGAGAATGGCCTGGCAAA+TGG | - | tig0000235:16988-17007 | Msa1335250:CDS | 50.0% | |
| GGAAGCTGGTCACAAATGAC+AGG | + | tig0000235:17156-17175 | None:intergenic | 50.0% | |
| GTCATTTGTGACCAGCTTCC+CGG | - | tig0000235:17156-17175 | Msa1335250:CDS | 50.0% | |
| TGGTGGAGAACTGCTTGAAC+CGG | + | tig0000235:17178-17197 | None:intergenic | 50.0% | |
| TCAAGCAGTTCTCCACCATG+CGG | - | tig0000235:17180-17199 | Msa1335250:CDS | 50.0% | |
| TTCTCCACCATGCGGGATAA+CGG | - | tig0000235:17188-17207 | Msa1335250:CDS | 50.0% | |
| GCTGAGACTGCTTGTGAGAA+TGG | - | tig0000235:17288-17307 | Msa1335250:CDS | 50.0% | |
| ! | CCCATTTGTTGGGGTTCTAG+AGG | - | tig0000235:17440-17459 | Msa1335250:intron | 50.0% |
| TGGTCTAGTGTACCTGGAGT+GGG | + | tig0000235:17474-17493 | None:intergenic | 50.0% | |
| ATGGTCTAGTGTACCTGGAG+TGG | + | tig0000235:17475-17494 | None:intergenic | 50.0% | |
| TGCACTAACTTCAGGCATGC+CGG | + | tig0000235:18192-18211 | None:intergenic | 50.0% | |
| GGTTGTACCAGTTCTGCTGT+TGG | - | tig0000235:18284-18303 | Msa1335250:CDS | 50.0% | |
| ATCGTGACCAACAGCAGAAC+TGG | + | tig0000235:18294-18313 | None:intergenic | 50.0% | |
| GTTGCTGAAGGTCAAGCAGA+AGG | - | tig0000235:18575-18594 | Msa1335250:CDS | 50.0% | |
| AGGTCAAGCAGAAGGGTTTC+GGG | - | tig0000235:18583-18602 | Msa1335250:CDS | 50.0% | |
| CGGGACTTGAGCAAGCATAT+TGG | - | tig0000235:18602-18621 | Msa1335250:CDS | 50.0% | |
| CCAAAGGAACATGTTGTGGC+CGG | + | tig0000235:18781-18800 | None:intergenic | 50.0% | |
| AAAATGTTGAGCGGCATGGG+AGG | - | tig0000235:18884-18903 | Msa1335250:exon | 50.0% | |
| !! | CTTCTTGTGGTGACCGGTTT+TGG | + | tig0000235:18947-18966 | None:intergenic | 50.0% |
| TTCGGTCTTCTTGTGGTGAC+CGG | + | tig0000235:18953-18972 | None:intergenic | 50.0% | |
| CTCTTCTGACTGTCTGTGAC+CGG | + | tig0000235:19065-19084 | None:intergenic | 50.0% | |
| ACCGGTGGTAGATAAGCTCA+AGG | - | tig0000235:19093-19112 | Msa1335250:five_prime_UTR | 50.0% | |
| CCCTTGAGCTTATCTACCAC+CGG | + | tig0000235:19097-19116 | None:intergenic | 50.0% | |
| CCGGTGGTAGATAAGCTCAA+GGG | - | tig0000235:19094-19113 | Msa1335250:five_prime_UTR | 50.0% | |
| !! | AAATGAGGCATTGAGTGGGC+AGG | - | tig0000235:19162-19181 | Msa1335250:intron | 50.0% |
| TCTCATGCTGGACTTGGACT+TGG | - | tig0000235:19571-19590 | Msa1335250:intron | 50.0% | |
| !! | AAGGCATCTGCCGCTGGTTT+AGG | - | tig0000235:16490-16509 | Msa1335250:CDS | 55.0% |
| !! | TGCCGCTGGTTTAGGCAAGA+AGG | - | tig0000235:16498-16517 | Msa1335250:CDS | 55.0% |
| !! | TGAGCTAGAGAGTGCTCACC+TGG | - | tig0000235:16564-16583 | Msa1335250:CDS | 55.0% |
| ! | ACGGTAAGGGTGACTTGTCC+AGG | + | tig0000235:16585-16604 | None:intergenic | 55.0% |
| GGACTTGAGGACCTTGGCAA+TGG | - | tig0000235:16883-16902 | Msa1335250:CDS | 55.0% | |
| TCGACGCCGGACTTTGACAA+AGG | - | tig0000235:17101-17120 | Msa1335250:CDS | 55.0% | |
| AACTGCTTGAACCGGGAAGC+TGG | + | tig0000235:17170-17189 | None:intergenic | 55.0% | |
| GGTGGAGAACTGCTTGAACC+GGG | + | tig0000235:17177-17196 | None:intergenic | 55.0% | |
| CAAGCAGTTCTCCACCATGC+GGG | - | tig0000235:17181-17200 | Msa1335250:CDS | 55.0% | |
| ACATCCGTTATCCCGCATGG+TGG | + | tig0000235:17195-17214 | None:intergenic | 55.0% | |
| CTTGGGGAATATCGCTACCC+TGG | + | tig0000235:17335-17354 | None:intergenic | 55.0% | |
| AGTGGCAGTCGAAAGGGAAG+AGG | - | tig0000235:18348-18367 | Msa1335250:CDS | 55.0% | |
| !! | TCTCTGAGGTGGTTCTGCAG+TGG | + | tig0000235:18633-18652 | None:intergenic | 55.0% |
| AGTTAACGGCGAAGCGTGAC+TGG | + | tig0000235:18670-18689 | None:intergenic | 55.0% | |
| AACATGTTGTGGCCGGTAGC+TGG | + | tig0000235:18774-18793 | None:intergenic | 55.0% | |
| CCGGCCACAACATGTTCCTT+TGG | - | tig0000235:18778-18797 | Msa1335250:CDS | 55.0% | |
| CGGACACCCTTTGACAGTTG+AGG | - | tig0000235:18838-18857 | Msa1335250:CDS | 55.0% | |
| CGGAAGTTGTCCTCGTTGAC+CGG | - | tig0000235:19043-19062 | Msa1335250:five_prime_UTR | 55.0% | |
| !! | AAGGCAAAGGCATCTGCCGC+TGG | - | tig0000235:16484-16503 | Msa1335250:CDS | 60.0% |
| AGCGAACACGGTGAACCAGC+TGG | - | tig0000235:16631-16650 | Msa1335250:CDS | 60.0% | |
| GAGGAGGAGAAACCCACTCC+AGG | - | tig0000235:17459-17478 | Msa1335250:intron | 60.0% | |
| GCGAAGCGTGACTGGCGATA+AGG | + | tig0000235:18662-18681 | None:intergenic | 60.0% | |
| ATGGGAGGCGACGTGGAAGT+TGG | - | tig0000235:18899-18918 | Msa1335250:five_prime_UTR | 60.0% | |
| CTGTCTGTGACCGGTCAACG+AGG | + | tig0000235:19056-19075 | None:intergenic | 60.0% | |
| !! | AGGCATTGAGTGGGCAGGCA+CGG | - | tig0000235:19167-19186 | Msa1335250:intron | 60.0% |
| GAGCGGCATGGGAGGCGACG+TGG | - | tig0000235:18892-18911 | Msa1335250:exon | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0000235 | gene | 15869 | 19695 | 15869 | ID=Msa1335250;Name=Msa1335250 |
| tig0000235 | mRNA | 15869 | 19695 | 15869 | ID=Msa1335250-mRNA-1;Parent=Msa1335250;Name=Msa1335250-mRNA-1;_AED=0.00;_eAED=0.00;_QI=355|1|1|1|0.5|0.66|3|470|626 |
| tig0000235 | exon | 15869 | 17405 | 15869 | ID=Msa1335250-mRNA-1:exon:65;Parent=Msa1335250-mRNA-1 |
| tig0000235 | exon | 18084 | 19153 | 18084 | ID=Msa1335250-mRNA-1:exon:64;Parent=Msa1335250-mRNA-1 |
| tig0000235 | exon | 19597 | 19695 | 19597 | ID=Msa1335250-mRNA-1:exon:63;Parent=Msa1335250-mRNA-1 |
| tig0000235 | five_prime_UTR | 19597 | 19695 | 19597 | ID=Msa1335250-mRNA-1:five_prime_utr;Parent=Msa1335250-mRNA-1 |
| tig0000235 | five_prime_UTR | 18898 | 19153 | 18898 | ID=Msa1335250-mRNA-1:five_prime_utr;Parent=Msa1335250-mRNA-1 |
| tig0000235 | CDS | 18084 | 18897 | 18084 | ID=Msa1335250-mRNA-1:cds;Parent=Msa1335250-mRNA-1 |
| tig0000235 | CDS | 16339 | 17405 | 16339 | ID=Msa1335250-mRNA-1:cds;Parent=Msa1335250-mRNA-1 |
| tig0000235 | three_prime_UTR | 15869 | 16338 | 15869 | ID=Msa1335250-mRNA-1:three_prime_utr;Parent=Msa1335250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
