Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0743280 | XP_003617670.1 | 98.273 | 695 | 12 | 0 | 1 | 695 | 1 | 695 | 0.0 | 1409 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0743280 | sp|Q7G188|FIMB1_ARATH | 71.199 | 684 | 193 | 4 | 1 | 682 | 1 | 682 | 0.0 | 995 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0743280 | G7K4B3 | 98.273 | 695 | 12 | 0 | 1 | 695 | 1 | 695 | 0.0 | 1409 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0743280 | 0.804066 | 2.581569e-49 | -8.615850e-47 |
| Msa0056230 | Msa0743280 | 0.813152 | 2.957857e-51 | -8.615850e-47 |
| Msa0065190 | Msa0743280 | 0.803756 | 2.994673e-49 | -8.615850e-47 |
| Msa0080620 | Msa0743280 | 0.800697 | 1.276080e-48 | -8.615850e-47 |
| Msa0116780 | Msa0743280 | 0.800991 | 1.111628e-48 | -8.615850e-47 |
| Msa0640780 | Msa0743280 | 0.801580 | 8.420955e-49 | -8.615850e-47 |
| Msa0708840 | Msa0743280 | 0.817247 | 3.640654e-52 | -8.615850e-47 |
| Msa0711860 | Msa0743280 | 0.808357 | 3.222370e-50 | -8.615850e-47 |
| Msa0729120 | Msa0743280 | 0.805105 | 1.567178e-49 | -8.615850e-47 |
| Msa0729590 | Msa0743280 | 0.807497 | 4.910899e-50 | -8.615850e-47 |
| Msa0736330 | Msa0743280 | 0.802648 | 5.077444e-49 | -8.615850e-47 |
| Msa0743280 | Msa0750590 | 0.806382 | 8.454465e-50 | -8.615850e-47 |
| Msa0743280 | Msa0754790 | 0.843707 | 1.187154e-58 | -8.615850e-47 |
| Msa0743280 | Msa0754840 | 0.835421 | 1.694990e-56 | -8.615850e-47 |
| Msa0743280 | Msa0755590 | 0.806995 | 6.272328e-50 | -8.615850e-47 |
| Msa0743280 | Msa0766880 | 0.800713 | 1.266672e-48 | -8.615850e-47 |
| Msa0743280 | Msa0797240 | 0.806959 | 6.385583e-50 | -8.615850e-47 |
| Msa0743280 | Msa0807840 | 0.822084 | 2.862792e-53 | -8.615850e-47 |
| Msa0743280 | Msa0819620 | 0.800903 | 1.158701e-48 | -8.615850e-47 |
| Msa0743280 | Msa0848780 | 0.821946 | 3.081057e-53 | -8.615850e-47 |
| Msa0743280 | Msa0850520 | 0.812526 | 4.055753e-51 | -8.615850e-47 |
| Msa0743280 | Msa0859830 | 0.808763 | 2.639887e-50 | -8.615850e-47 |
| Msa0743280 | Msa0863470 | 0.975986 | 5.714388e-141 | -8.615850e-47 |
| Msa0743280 | Msa0866310 | 0.808211 | 3.461933e-50 | -8.615850e-47 |
| Msa0743280 | Msa0866510 | 0.851476 | 8.657801e-61 | -8.615850e-47 |
| Msa0743280 | Msa0883880 | 0.802361 | 5.818639e-49 | -8.615850e-47 |
| Msa0743280 | Msa0899080 | 0.801602 | 8.332262e-49 | -8.615850e-47 |
| Msa0743280 | Msa0961200 | 0.808304 | 3.307766e-50 | -8.615850e-47 |
| Msa0743280 | Msa1033460 | 0.804000 | 2.665414e-49 | -8.615850e-47 |
| Msa0743280 | Msa1037450 | 0.801071 | 1.070247e-48 | -8.615850e-47 |
| Msa0743280 | Msa1057320 | 0.820962 | 5.198393e-53 | -8.615850e-47 |
| Msa0743280 | Msa1101610 | 0.802222 | 6.213832e-49 | -8.615850e-47 |
| Msa0743280 | Msa1113780 | 0.809102 | 2.234029e-50 | -8.615850e-47 |
| Msa0743280 | Msa1121580 | 0.830848 | 2.330520e-55 | -8.615850e-47 |
| Msa0743280 | Msa1156270 | 0.807713 | 4.417959e-50 | -8.615850e-47 |
| Msa0743280 | Msa1160470 | 0.806529 | 7.872018e-50 | -8.615850e-47 |
| Msa0743280 | Msa1173410 | 0.822441 | 2.365635e-53 | -8.615850e-47 |
| Msa0743280 | Msa1175970 | 0.827316 | 1.673559e-54 | -8.615850e-47 |
| Msa0743280 | Msa1179680 | 0.811947 | 5.426277e-51 | -8.615850e-47 |
| Msa0743280 | Msa1182530 | 0.817433 | 3.305476e-52 | -8.615850e-47 |
| Msa0743280 | Msa1182950 | 0.805708 | 1.171796e-49 | -8.615850e-47 |
| Msa0743280 | Msa1182960 | 0.832295 | 1.025761e-55 | -8.615850e-47 |
| Msa0743280 | Msa1215660 | 0.805794 | 1.123763e-49 | -8.615850e-47 |
| Msa0743280 | Msa1226330 | 0.800659 | 1.298929e-48 | -8.615850e-47 |
| Msa0743280 | Msa1257930 | 0.805149 | 1.534243e-49 | -8.615850e-47 |
| Msa0743280 | Msa1301410 | 0.813331 | 2.702169e-51 | -8.615850e-47 |
| Msa0743280 | Msa1335130 | 0.800599 | 1.336193e-48 | -8.615850e-47 |
| Msa0743280 | Msa1374210 | 0.801062 | 1.074697e-48 | -8.615850e-47 |
| Msa0743280 | Msa1393350 | 0.815058 | 1.122614e-51 | -8.615850e-47 |
| Msa0743280 | Msa1393600 | 0.812597 | 3.914212e-51 | -8.615850e-47 |
| Msa0743280 | Msa1452230 | 0.803707 | 3.065238e-49 | -8.615850e-47 |
| Msa0190470 | Msa0743280 | 0.801102 | 1.054721e-48 | -8.615850e-47 |
| Msa0216010 | Msa0743280 | 0.813678 | 2.266505e-51 | -8.615850e-47 |
| Msa0228320 | Msa0743280 | 0.805995 | 1.019952e-49 | -8.615850e-47 |
| Msa0228360 | Msa0743280 | 0.802171 | 6.367733e-49 | -8.615850e-47 |
| Msa0229750 | Msa0743280 | 0.819119 | 1.372691e-52 | -8.615850e-47 |
| Msa0369580 | Msa0743280 | 0.840088 | 1.073245e-57 | -8.615850e-47 |
| Msa0377460 | Msa0743280 | 0.812972 | 3.239483e-51 | -8.615850e-47 |
| Msa0387740 | Msa0743280 | 0.814068 | 1.859973e-51 | -8.615850e-47 |
| Msa0388790 | Msa0743280 | 0.802631 | 5.120149e-49 | -8.615850e-47 |
| Msa0404860 | Msa0743280 | 0.805222 | 1.481709e-49 | -8.615850e-47 |
| Msa0417000 | Msa0743280 | 0.842410 | 2.629693e-58 | -8.615850e-47 |
| Msa0426860 | Msa0743280 | 0.821921 | 3.122720e-53 | -8.615850e-47 |
| Msa0426890 | Msa0743280 | 0.828685 | 7.835364e-55 | -8.615850e-47 |
| Msa0463820 | Msa0743280 | 0.809444 | 1.886411e-50 | -8.615850e-47 |
| Msa0260930 | Msa0743280 | 0.817733 | 2.829699e-52 | -8.615850e-47 |
| Msa0293060 | Msa0743280 | 0.803899 | 2.797095e-49 | -8.615850e-47 |
| Msa0364010 | Msa0743280 | 0.827610 | 1.422577e-54 | -8.615850e-47 |
| Msa0483230 | Msa0743280 | 0.804818 | 1.799513e-49 | -8.615850e-47 |
| Msa0483410 | Msa0743280 | 0.803681 | 3.104227e-49 | -8.615850e-47 |
| Msa0511600 | Msa0743280 | 0.800606 | 1.331939e-48 | -8.615850e-47 |
| Msa0517400 | Msa0743280 | 0.813773 | 2.160108e-51 | -8.615850e-47 |
| Msa0553310 | Msa0743280 | 0.800385 | 1.477669e-48 | -8.615850e-47 |
| Msa0577920 | Msa0743280 | 0.818333 | 2.070043e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0743280 | MtrunA17_Chr5g0445111 | 98.273 | 695 | 12 | 0 | 1 | 695 | 1 | 695 | 0.0 | 1409 |
| Msa0743280 | MtrunA17_Chr5g0448051 | 69.559 | 680 | 192 | 2 | 1 | 680 | 1 | 665 | 0.0 | 978 |
| Msa0743280 | MtrunA17_Chr8g0338551 | 66.720 | 628 | 208 | 1 | 1 | 627 | 1 | 628 | 0.0 | 874 |
| Msa0743280 | MtrunA17_Chr7g0234481 | 68.051 | 626 | 197 | 2 | 1 | 623 | 1 | 626 | 0.0 | 867 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0743280 | AT4G26700.4 | 71.199 | 684 | 193 | 4 | 1 | 682 | 1 | 682 | 0.0 | 995 |
| Msa0743280 | AT4G26700.2 | 71.199 | 684 | 193 | 4 | 1 | 682 | 1 | 682 | 0.0 | 995 |
| Msa0743280 | AT4G26700.1 | 71.199 | 684 | 193 | 4 | 1 | 682 | 1 | 682 | 0.0 | 995 |
| Msa0743280 | AT5G55400.1 | 69.784 | 695 | 190 | 7 | 1 | 681 | 1 | 689 | 0.0 | 993 |
| Msa0743280 | AT5G55400.2 | 69.784 | 695 | 190 | 7 | 1 | 681 | 1 | 689 | 0.0 | 993 |
| Msa0743280 | AT5G55400.3 | 69.784 | 695 | 190 | 7 | 1 | 681 | 1 | 689 | 0.0 | 993 |
| Msa0743280 | AT5G35700.1 | 67.057 | 683 | 207 | 3 | 1 | 682 | 1 | 666 | 0.0 | 947 |
| Msa0743280 | AT2G04750.1 | 64.602 | 678 | 211 | 3 | 1 | 676 | 1 | 651 | 0.0 | 899 |
| Msa0743280 | AT4G26700.5 | 73.473 | 573 | 150 | 2 | 1 | 572 | 1 | 572 | 0.0 | 881 |
| Msa0743280 | AT4G26700.6 | 73.473 | 573 | 150 | 2 | 1 | 572 | 1 | 572 | 0.0 | 881 |
| Msa0743280 | AT4G26700.3 | 73.473 | 573 | 150 | 2 | 1 | 572 | 1 | 572 | 0.0 | 881 |
| Msa0743280 | AT5G48460.1 | 65.361 | 638 | 219 | 2 | 1 | 636 | 1 | 638 | 0.0 | 863 |
| Msa0743280 | AT4G26700.7 | 74.081 | 517 | 131 | 3 | 167 | 682 | 19 | 533 | 0.0 | 791 |
Find 167 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTGGTCCTTTATGTTTC+TGG | 0.039840 | 5_1:-63427715 | Msa0743280:five_prime_UTR |
| ATCTCACATTCAGAGCTTTA+AGG | 0.151580 | 5_1:-63423040 | Msa0743280:intron |
| TTTCTAAATGGCATTCTAAT+TGG | 0.198379 | 5_1:+63423479 | None:intergenic |
| GTGATGCTGATATTCTTAAA+TGG | 0.216833 | 5_1:-63423095 | Msa0743280:CDS |
| TGTTTCCAGTTAACCGATTC+AGG | 0.221059 | 5_1:+63423515 | None:intergenic |
| TTGCAGCCTCATCTGGTTCT+AGG | 0.222382 | 5_1:-63425753 | Msa0743280:intron |
| TTAAAAGTATTTGCAGAAAA+AGG | 0.234805 | 5_1:+63427649 | None:intergenic |
| TATGGCTTATCACTTATTAT+TGG | 0.238365 | 5_1:+63421617 | None:intergenic |
| AAATGAGAGGCAAAAGATTA+AGG | 0.249591 | 5_1:-63421763 | Msa0743280:three_prime_UTR |
| CTCAAGCTATATATTCATTC+TGG | 0.249651 | 5_1:+63421907 | None:intergenic |
| CAAAACGAAATCTTTCTCTT+TGG | 0.257305 | 5_1:-63425969 | Msa0743280:CDS |
| ACATAAACTATGACAAATTA+TGG | 0.262343 | 5_1:+63421599 | None:intergenic |
| GACACCTCAGCTTGTGGAAT+TGG | 0.275119 | 5_1:-63425503 | Msa0743280:CDS |
| GTCAAGTGGACTCTTCTTCC+TGG | 0.297646 | 5_1:-63422899 | Msa0743280:CDS |
| ATCCTCAGGTAACAAATATA+TGG | 0.304430 | 5_1:+63422380 | None:intergenic |
| AGAAATGAGAGAGATCAATA+AGG | 0.305310 | 5_1:-63421737 | Msa0743280:three_prime_UTR |
| GAAAGTTATTCATCCCTTAA+TGG | 0.306011 | 5_1:-63422082 | Msa0743280:CDS |
| AAAACGAAATCTTTCTCTTT+GGG | 0.307791 | 5_1:-63425968 | Msa0743280:CDS |
| TCCCCTGCCCCTTCCGTTTG+TGG | 0.309435 | 5_1:-63422112 | Msa0743280:CDS |
| CGTTGTCTTCAGTCTGTTGT+TGG | 0.313142 | 5_1:+63422185 | None:intergenic |
| CACAAGATTTGCTCTTTCAT+TGG | 0.321474 | 5_1:+63424094 | None:intergenic |
| TCTTCACAACTTGAATTTGA+TGG | 0.329624 | 5_1:-63422010 | Msa0743280:CDS |
| CCGAATTGAGGCATAAAGTA+TGG | 0.336659 | 5_1:+63425932 | None:intergenic |
| CATTACATATGTGACATCTT+TGG | 0.337332 | 5_1:+63421863 | None:intergenic |
| CCTAAAACCACTTCTAGATT+TGG | 0.337607 | 5_1:-63427731 | Msa0743280:five_prime_UTR |
| GGAAATAAGAAGCTCATTCT+TGG | 0.337857 | 5_1:-63423371 | Msa0743280:intron |
| GGAAGGGGCAGGGGAAGCTT+CGG | 0.342813 | 5_1:+63422120 | None:intergenic |
| CTTGAGTCAATATCTTCCTT+TGG | 0.350286 | 5_1:-63426193 | Msa0743280:CDS |
| CACTTTGACCCTTGGTAACT+AGG | 0.354139 | 5_1:+63422836 | None:intergenic |
| CTCAATTCGGCTAAGGCTAT+TGG | 0.354276 | 5_1:-63425919 | Msa0743280:CDS |
| GTTTATGTTGCAGCCTCATC+TGG | 0.356121 | 5_1:-63425760 | Msa0743280:intron |
| GTACAGTGAAGATGAGATTA+GGG | 0.357196 | 5_1:-63427242 | Msa0743280:CDS |
| CATCACTTATCTCCTTTCCT+TGG | 0.359853 | 5_1:+63423112 | None:intergenic |
| GTAATTTCAGATCCAACTTC+TGG | 0.360902 | 5_1:-63425545 | Msa0743280:intron |
| TTTGTTACCTGAGGATATTA+TGG | 0.372370 | 5_1:-63422373 | Msa0743280:CDS |
| TGTACAGTGAAGATGAGATT+AGG | 0.373898 | 5_1:-63427243 | Msa0743280:CDS |
| CTATTTGATCTTTCAAAAGA+TGG | 0.374761 | 5_1:-63426153 | Msa0743280:CDS |
| CTTATCAATGTTGCTGTGCC+TGG | 0.375092 | 5_1:-63426018 | Msa0743280:CDS |
| GAAGGGGCAGGGGAAGCTTC+GGG | 0.377533 | 5_1:+63422121 | None:intergenic |
| ATCACTTATCTCCTTTCCTT+GGG | 0.393063 | 5_1:+63423113 | None:intergenic |
| TACAAATTCAGTAGTGGAAC+TGG | 0.394913 | 5_1:+63421655 | None:intergenic |
| GTTGATTTCTCAAATCATAA+AGG | 0.401124 | 5_1:-63425730 | Msa0743280:intron |
| GTGGCTGGACTGCAATGTTC+AGG | 0.408374 | 5_1:+63424134 | None:intergenic |
| CACGATTAGCGGATCAGAAA+AGG | 0.409153 | 5_1:-63426262 | Msa0743280:CDS |
| CTCCTTGTTTCGTTGTAGCT+TGG | 0.413139 | 5_1:+63426337 | None:intergenic |
| GAAATGAGAGAGATCAATAA+GGG | 0.415759 | 5_1:-63421736 | Msa0743280:three_prime_UTR |
| CAAGCTGAGGTGTCTTCTTA+AGG | 0.418489 | 5_1:+63425512 | None:intergenic |
| CAGAATGGTAAAGTTACATA+TGG | 0.418490 | 5_1:-63427310 | Msa0743280:CDS |
| AATGAGAGGCAAAAGATTAA+GGG | 0.418749 | 5_1:-63421762 | Msa0743280:three_prime_UTR |
| TACCAAGATGTCAAAATTTG+AGG | 0.425052 | 5_1:-63427547 | Msa0743280:exon |
| GAAGTTCAACCTGTGTAAAC+TGG | 0.425063 | 5_1:+63427493 | None:intergenic |
| AGAGAGAGAGATTTCTTGAT+GGG | 0.428517 | 5_1:+63428126 | None:intergenic |
| CTATTTGAGGATGTCAGAAA+TGG | 0.430841 | 5_1:-63423722 | Msa0743280:CDS |
| CATCTTAGTAGAACCTTGTC+AGG | 0.432812 | 5_1:+63425311 | None:intergenic |
| TTCAATGTACTTACCACAAA+CGG | 0.440067 | 5_1:-63428078 | Msa0743280:five_prime_UTR |
| GGGTGGTTATGCTTTCGTTA+AGG | 0.441687 | 5_1:+63426292 | None:intergenic |
| TGATGCTGATATTCTTAAAT+GGG | 0.441756 | 5_1:-63423094 | Msa0743280:CDS |
| AACTAATGCCAGAAACATAA+AGG | 0.442002 | 5_1:+63427707 | None:intergenic |
| TCGTGTAAATAATCTATTTG+AGG | 0.443027 | 5_1:-63423735 | Msa0743280:CDS |
| TAGAGCCAAGGGTTGTCAAT+TGG | 0.447407 | 5_1:-63422861 | Msa0743280:CDS |
| TTTAGCTTCATCATTAAAGA+TGG | 0.450321 | 5_1:+63427280 | None:intergenic |
| ACTTTCATCTTCACCACAAA+CGG | 0.455623 | 5_1:+63422099 | None:intergenic |
| CTGACAAGGTTCTACTAAGA+TGG | 0.458366 | 5_1:-63425310 | Msa0743280:CDS |
| CTAAATGGCATTCTAATTGG+AGG | 0.460061 | 5_1:+63423482 | None:intergenic |
| ATCAAAAGTATCTCTTCAAA+AGG | 0.463692 | 5_1:+63427619 | None:intergenic |
| TCACCACAAACGGAAGGGGC+AGG | 0.469547 | 5_1:+63422109 | None:intergenic |
| ACCCTTCTTCACACGATTAG+CGG | 0.469956 | 5_1:-63426273 | Msa0743280:CDS |
| TGCAGCCTCATCTGGTTCTA+GGG | 0.470551 | 5_1:-63425752 | Msa0743280:intron |
| GAGACTCCAATACATTATAC+TGG | 0.471200 | 5_1:+63422207 | None:intergenic |
| AAATGCAAGATTAAGATTTG+AGG | 0.473328 | 5_1:+63424007 | None:intergenic |
| ACCACAAACGGAAGGGGCAG+GGG | 0.475123 | 5_1:+63422111 | None:intergenic |
| ATCCGCTAATCGTGTGAAGA+AGG | 0.478962 | 5_1:+63426271 | None:intergenic |
| TAACATTGGCGCACAAGACT+TGG | 0.479565 | 5_1:-63425884 | Msa0743280:CDS |
| AACAGAAAAGTGAATAGCAT+TGG | 0.480035 | 5_1:-63423069 | Msa0743280:CDS |
| ACATCTTTGGCATGTATAGC+TGG | 0.482103 | 5_1:+63421876 | None:intergenic |
| CCATACTTTATGCCTCAATT+CGG | 0.482478 | 5_1:-63425932 | Msa0743280:CDS |
| TCGCTCAATTATTTCATCAC+AGG | 0.484806 | 5_1:-63423983 | Msa0743280:intron |
| GGAAGATATTGACTCAAGAA+TGG | 0.484838 | 5_1:+63426198 | None:intergenic |
| TGAATCGGTTAACTGGAAAC+AGG | 0.485665 | 5_1:-63423513 | Msa0743280:CDS |
| ATCAGTGTCGCACGAAAGCT+TGG | 0.486279 | 5_1:-63422408 | Msa0743280:CDS |
| TTGCAGCCAGTATAATGTAT+TGG | 0.489064 | 5_1:-63422213 | Msa0743280:CDS |
| AAACATACCACTTTGACCCT+TGG | 0.491256 | 5_1:+63422828 | None:intergenic |
| AGGGGAAGCTTCGGGTGTGT+TGG | 0.494209 | 5_1:+63422129 | None:intergenic |
| ATTGGCATCTTTAGTATCCA+AGG | 0.497711 | 5_1:+63424112 | None:intergenic |
| GGCTAAGATCTGCCAGAAGT+TGG | 0.498355 | 5_1:+63425533 | None:intergenic |
| CAGAAAGAATGGGCTGCAAA+AGG | 0.498410 | 5_1:-63424061 | Msa0743280:CDS |
| ACCAAGATGTCAAAATTTGA+GGG | 0.500673 | 5_1:-63427546 | Msa0743280:exon |
| GTGGTAAGTACATTGAATGA+AGG | 0.507743 | 5_1:+63428084 | None:intergenic |
| GTTTAAGACTCAACCGTTTG+TGG | 0.509657 | 5_1:+63428065 | None:intergenic |
| TCAAATAGATCATTTGTAGC+TGG | 0.510329 | 5_1:+63426168 | None:intergenic |
| TGCGACACTGATTATGTAAG+TGG | 0.514332 | 5_1:+63422419 | None:intergenic |
| GGTATCATCAACACTCAAGT+TGG | 0.515488 | 5_1:+63422051 | None:intergenic |
| GGCGCACAAGACTTGGTTGA+CGG | 0.518448 | 5_1:-63425877 | Msa0743280:CDS |
| CACCACAAACGGAAGGGGCA+GGG | 0.520815 | 5_1:+63422110 | None:intergenic |
| AAATTTATTGTTCTTTGTAG+AGG | 0.522495 | 5_1:-63421794 | Msa0743280:three_prime_UTR |
| TTCTCAGTGCAGTAGAGCCA+AGG | 0.523939 | 5_1:-63422873 | Msa0743280:CDS |
| GCTTGAGCATGCAGAAAGAA+TGG | 0.525075 | 5_1:-63424072 | Msa0743280:CDS |
| AGGTTCCAATTGACAACCCT+TGG | 0.526371 | 5_1:+63422856 | None:intergenic |
| TCTTAATTTGTCTCCTGACA+AGG | 0.530133 | 5_1:-63425324 | Msa0743280:CDS |
| TTCCATATATTTGTTACCTG+AGG | 0.531885 | 5_1:-63422382 | Msa0743280:CDS |
| ATCTTTAATGATGAAGCTAA+AGG | 0.533344 | 5_1:-63427278 | Msa0743280:CDS |
| ATTAAGATTTGAGGTTCCCT+CGG | 0.539291 | 5_1:+63424016 | None:intergenic |
| TCTTTAGTATCCAAGGTGGC+TGG | 0.540347 | 5_1:+63424119 | None:intergenic |
| TTTATGCCTCAATTCGGCTA+AGG | 0.541053 | 5_1:-63425926 | Msa0743280:CDS |
| ACGATTAGCGGATCAGAAAA+GGG | 0.542026 | 5_1:-63426261 | Msa0743280:CDS |
| TATTTGAGGATGTCAGAAAT+GGG | 0.544161 | 5_1:-63423721 | Msa0743280:intron |
| AAGAGAGATGCTTTAGAATG+TGG | 0.544875 | 5_1:-63423781 | Msa0743280:CDS |
| AGAATGTGGATCAATAGTCT+TGG | 0.545573 | 5_1:-63423767 | Msa0743280:CDS |
| ATCTTCACCACAAACGGAAG+GGG | 0.546488 | 5_1:+63422105 | None:intergenic |
| TTATCAATGTTGCTGTGCCT+GGG | 0.546584 | 5_1:-63426017 | Msa0743280:CDS |
| GAGATCTCATTCCCAAGGAA+AGG | 0.547069 | 5_1:-63423124 | Msa0743280:CDS |
| TAAGAAGACACCTCAGCTTG+TGG | 0.548237 | 5_1:-63425509 | Msa0743280:CDS |
| GGATGCACAGTTGTTAACAT+TGG | 0.549678 | 5_1:-63425898 | Msa0743280:CDS |
| CAAAAGATGGCATTCTTCTG+TGG | 0.549711 | 5_1:-63426140 | Msa0743280:intron |
| CAATAGCCTTAGCCGAATTG+AGG | 0.553192 | 5_1:+63425920 | None:intergenic |
| AGAGAAAGAGATCCAAATGC+AGG | 0.553234 | 5_1:+63427595 | None:intergenic |
| GACTGCAATGTTCAGGAGCA+AGG | 0.557987 | 5_1:+63424141 | None:intergenic |
| GTGAGAGTGCTAGCAGGTGA+AGG | 0.567234 | 5_1:+63422154 | None:intergenic |
| AGAGAGATTTCTTGATGGGG+TGG | 0.567674 | 5_1:+63428130 | None:intergenic |
| GGAATTGGTTGATGATAGCC+AGG | 0.569482 | 5_1:-63425488 | Msa0743280:intron |
| TATACCTCCATAATATCCTC+AGG | 0.569641 | 5_1:+63422366 | None:intergenic |
| TCATCTTCACCACAAACGGA+AGG | 0.570006 | 5_1:+63422103 | None:intergenic |
| TCTCAGTGCAGTAGAGCCAA+GGG | 0.573854 | 5_1:-63422872 | Msa0743280:CDS |
| ACATTGCAGTCCAGCCACCT+TGG | 0.573939 | 5_1:-63424129 | Msa0743280:CDS |
| CTTGAGCATGCAGAAAGAAT+GGG | 0.573945 | 5_1:-63424071 | Msa0743280:CDS |
| CATCTTCACCACAAACGGAA+GGG | 0.574029 | 5_1:+63422104 | None:intergenic |
| GAGAGAGAGATTTCTTGATG+GGG | 0.574879 | 5_1:+63428127 | None:intergenic |
| GCTCGCTCGTCTATAGTCCC+AGG | 0.575614 | 5_1:+63426000 | None:intergenic |
| TGCAATCAAGTCATAAGAGT+CGG | 0.575866 | 5_1:-63423446 | Msa0743280:CDS |
| GCTCACATAAACAGCTACCT+TGG | 0.577283 | 5_1:-63426228 | Msa0743280:CDS |
| GAATTTGATGGCGTTGCCGT+CGG | 0.586421 | 5_1:-63421998 | Msa0743280:CDS |
| AACCAAGCTACAACGAAACA+AGG | 0.586583 | 5_1:-63426339 | Msa0743280:CDS |
| TCATTTGTAGCTGGATCCAA+AGG | 0.600205 | 5_1:+63426177 | None:intergenic |
| AGAGACTGTTGTATCAGAAG+TGG | 0.603731 | 5_1:+63422030 | None:intergenic |
| TCCGCTAATCGTGTGAAGAA+GGG | 0.603800 | 5_1:+63426272 | None:intergenic |
| GCTTTCGTTAAGGAATGATG+AGG | 0.604252 | 5_1:+63426302 | None:intergenic |
| GCTTCAAAGCCAGTTTACAC+AGG | 0.605203 | 5_1:-63427502 | Msa0743280:CDS |
| TATATATTTACAGGATGCAG+AGG | 0.606274 | 5_1:-63424186 | Msa0743280:intron |
| AATTTGAGATCTCATTCCCA+AGG | 0.610970 | 5_1:-63423129 | Msa0743280:CDS |
| GCAAAAGGTACTTGAGCACA+AGG | 0.612195 | 5_1:-63424046 | Msa0743280:CDS |
| TTGGTAGTGAGAGTGCTAGC+AGG | 0.614552 | 5_1:+63422148 | None:intergenic |
| CTACTGCACTGAGAAGCTCC+AGG | 0.616153 | 5_1:+63422881 | None:intergenic |
| GTTACCTGAGGATATTATGG+AGG | 0.617888 | 5_1:-63422370 | Msa0743280:intron |
| TAAAGGACCAAATCTAGAAG+TGG | 0.621404 | 5_1:+63427724 | None:intergenic |
| CAATTGGAACCTAGTTACCA+AGG | 0.625122 | 5_1:-63422845 | Msa0743280:CDS |
| TCTTTGGCATGTATAGCTGG+AGG | 0.626659 | 5_1:+63421879 | None:intergenic |
| ACATAATACAAATTCAGTAG+TGG | 0.628277 | 5_1:+63421649 | None:intergenic |
| TCAAAATAACTCATCACCGA+CGG | 0.632299 | 5_1:+63421982 | None:intergenic |
| AGAGGAATGTGCAAAATGAG+AGG | 0.633651 | 5_1:-63421776 | Msa0743280:three_prime_UTR |
| CAGGATAAGAGCTTGTCAAG+TGG | 0.634181 | 5_1:-63422913 | Msa0743280:CDS |
| GTACATTGAATGAAGGAACA+TGG | 0.635487 | 5_1:+63428091 | None:intergenic |
| TCAACCAATTCCACAAGCTG+AGG | 0.641796 | 5_1:+63425499 | None:intergenic |
| ATCAACCCTAGAACCAGATG+AGG | 0.645171 | 5_1:+63425747 | None:intergenic |
| CTAGTTACCAAGGGTCAAAG+TGG | 0.646174 | 5_1:-63422835 | Msa0743280:intron |
| GTGCTTTGTCAGGATAACGT+TGG | 0.648060 | 5_1:-63427775 | Msa0743280:intron |
| AAAACATTATCTCATGCATG+TGG | 0.658044 | 5_1:+63421938 | None:intergenic |
| GCTAATCGTGTGAAGAAGGG+TGG | 0.662528 | 5_1:+63426275 | None:intergenic |
| AATTGGAACCTAGTTACCAA+GGG | 0.672164 | 5_1:-63422844 | Msa0743280:CDS |
| TACAGTGAAGATGAGATTAG+GGG | 0.672715 | 5_1:-63427241 | Msa0743280:CDS |
| AGCACAAGGGACATTACCGA+GGG | 0.673380 | 5_1:-63424032 | Msa0743280:CDS |
| GAGCACAAGGGACATTACCG+AGG | 0.674381 | 5_1:-63424033 | Msa0743280:CDS |
| ACAGTGAAGATGAGATTAGG+GGG | 0.681059 | 5_1:-63427240 | Msa0743280:CDS |
| GCTGGCAATGATATTGTGCA+AGG | 0.690463 | 5_1:-63423392 | Msa0743280:CDS |
| GGCATCTTTAGTATCCAAGG+TGG | 0.710629 | 5_1:+63424115 | None:intergenic |
| TCAAGAATGGATCATCACCA+AGG | 0.724787 | 5_1:+63426211 | None:intergenic |
| CAAAAGGTACTTGAGCACAA+GGG | 0.747889 | 5_1:-63424045 | Msa0743280:CDS |
| CAAGCTACAACGAAACAAGG+AGG | 0.764617 | 5_1:-63426336 | Msa0743280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTACTAATGAAAATATT+CGG | + | chr5_1:63424839-63424858 | None:intergenic | 10.0% |
| !!! | TTAACTATCTTATAATTTTT+TGG | - | chr5_1:63425320-63425339 | Msa0743280:CDS | 10.0% |
| !! | AAAATTCATTGATAAGAAAA+GGG | + | chr5_1:63421749-63421768 | None:intergenic | 15.0% |
| !! | AAAAATTCATTGATAAGAAA+AGG | + | chr5_1:63421750-63421769 | None:intergenic | 15.0% |
| !!! | AATGAATTTTTGTTCATTTT+TGG | - | chr5_1:63421759-63421778 | Msa0743280:three_prime_UTR | 15.0% |
| !!! | AATAACTTACTTTTGATTTA+AGG | + | chr5_1:63422224-63422243 | None:intergenic | 15.0% |
| !!! | GACATAATTTGTTTTATTAT+AGG | - | chr5_1:63424051-63424070 | Msa0743280:CDS | 15.0% |
| !!! | TGATTAATCTTACTTTTTAT+TGG | - | chr5_1:63424320-63424339 | Msa0743280:intron | 15.0% |
| !!! | TTTAACAACATTTTATGATT+AGG | - | chr5_1:63424485-63424504 | Msa0743280:intron | 15.0% |
| !!! | AATAAAGGTAGATTTTTATT+AGG | - | chr5_1:63425015-63425034 | Msa0743280:intron | 15.0% |
| !! | AGTTCTTAAGTTATTTAATT+AGG | - | chr5_1:63425793-63425812 | Msa0743280:intron | 15.0% |
| !! | GTTCTTAAGTTATTTAATTA+GGG | - | chr5_1:63425794-63425813 | Msa0743280:intron | 15.0% |
| !!! | ATGGATTAATAATAGTTTAT+GGG | - | chr5_1:63427128-63427147 | Msa0743280:intron | 15.0% |
| !! | AAAGAAAAATACAACAATAT+GGG | + | chr5_1:63428000-63428019 | None:intergenic | 15.0% |
| !! | AAAAGAAAAATACAACAATA+TGG | + | chr5_1:63428001-63428020 | None:intergenic | 15.0% |
| !!! | TTTCTGATTTTTAAGTATCT+CGG | - | chr5_1:63421651-63421670 | Msa0743280:three_prime_UTR | 20.0% |
| !!! | TTAAAAGTATTTGCAGAAAA+AGG | + | chr5_1:63422041-63422060 | None:intergenic | 20.0% |
| !!! | TTAATGGTAAGTTTGTTTTA+TGG | - | chr5_1:63422524-63422543 | Msa0743280:intron | 20.0% |
| !! | ATTACATGATACAAAAACTA+CGG | + | chr5_1:63422702-63422721 | None:intergenic | 20.0% |
| !!! | TTTTGTATCATGTAATACTT+AGG | - | chr5_1:63422706-63422725 | Msa0743280:intron | 20.0% |
| !! | TTTGTATCATGTAATACTTA+GGG | - | chr5_1:63422707-63422726 | Msa0743280:intron | 20.0% |
| !! | TTTCAAATGATTAGGAATTT+CGG | - | chr5_1:63422874-63422893 | Msa0743280:CDS | 20.0% |
| !! | CAAAAATATTAGAGAAAAGA+TGG | - | chr5_1:63422945-63422964 | Msa0743280:intron | 20.0% |
| !! | AATTCTCCAAAATAAAACTT+CGG | + | chr5_1:63423070-63423089 | None:intergenic | 20.0% |
| !!! | AAAATTAAAACCTTTTGACT+TGG | + | chr5_1:63423100-63423119 | None:intergenic | 20.0% |
| !!! | TTAATTTTACACTTAGTCAA+TGG | - | chr5_1:63423112-63423131 | Msa0743280:CDS | 20.0% |
| !!! | TATTATTACATTTTTCATGC+AGG | - | chr5_1:63423308-63423327 | Msa0743280:intron | 20.0% |
| !! | AATGTCGACAAAATATTATA+GGG | + | chr5_1:63423865-63423884 | None:intergenic | 20.0% |
| !! | AAATGTCGACAAAATATTAT+AGG | + | chr5_1:63423866-63423885 | None:intergenic | 20.0% |
| !!! | TTTTTACAAAGTGTGTTTTA+GGG | - | chr5_1:63424293-63424312 | Msa0743280:intron | 20.0% |
| !!! | TATTTTCATTAGTAAAAAGC+AGG | - | chr5_1:63424841-63424860 | Msa0743280:intron | 20.0% |
| !! | AAAAAGCAGGATATATAAAA+AGG | - | chr5_1:63424854-63424873 | Msa0743280:intron | 20.0% |
| !! | AAAAGCAGGATATATAAAAA+GGG | - | chr5_1:63424855-63424874 | Msa0743280:intron | 20.0% |
| !! | AATAACTTCTGCAATTATAT+TGG | + | chr5_1:63424910-63424929 | None:intergenic | 20.0% |
| !! | AATATAATTGCAGAAGTTAT+TGG | - | chr5_1:63424909-63424928 | Msa0743280:intron | 20.0% |
| !!! | TATTGTTCTAGTATATTTTG+AGG | - | chr5_1:63424986-63425005 | Msa0743280:intron | 20.0% |
| !!! | AGTTAAAAGAGTATAAAACA+TGG | + | chr5_1:63425306-63425325 | None:intergenic | 20.0% |
| !!! | GGTTTTTTGAAGAAAAAAAA+TGG | - | chr5_1:63426668-63426687 | Msa0743280:intron | 20.0% |
| !!! | ATTTATTAGTGACACTATTT+TGG | - | chr5_1:63426736-63426755 | Msa0743280:intron | 20.0% |
| !!! | GATGGATTAATAATAGTTTA+TGG | - | chr5_1:63427127-63427146 | Msa0743280:intron | 20.0% |
| !! | AAATTTATTGTTCTTTGTAG+AGG | - | chr5_1:63427893-63427912 | Msa0743280:intron | 20.0% |
| !!! | TGTATTTTTCTTTTTCATGT+TGG | - | chr5_1:63428007-63428026 | Msa0743280:intron | 20.0% |
| !! | ACATAAACTATGACAAATTA+TGG | + | chr5_1:63428091-63428110 | None:intergenic | 20.0% |
| ! | AAAAAGGAATAACAACAATG+TGG | + | chr5_1:63422025-63422044 | None:intergenic | 25.0% |
| !!! | ATCAAAAGTATCTCTTCAAA+AGG | + | chr5_1:63422071-63422090 | None:intergenic | 25.0% |
| !! | TCTCTATCTTTTTAATGCAT+TGG | - | chr5_1:63422112-63422131 | Msa0743280:CDS | 25.0% |
| ! | TTTCTTCTTTCCTTATACAA+AGG | - | chr5_1:63422243-63422262 | Msa0743280:intron | 25.0% |
| ! | TACGATACAATACATGAAAT+TGG | + | chr5_1:63422280-63422299 | None:intergenic | 25.0% |
| ! | ATCTCTTTCAAAAATCAGAA+TGG | - | chr5_1:63422362-63422381 | Msa0743280:intron | 25.0% |
| !! | TTTAGCTTCATCATTAAAGA+TGG | + | chr5_1:63422410-63422429 | None:intergenic | 25.0% |
| ! | ATCTTTAATGATGAAGCTAA+AGG | - | chr5_1:63422409-63422428 | Msa0743280:CDS | 25.0% |
| !!! | TGATTTTGAAGCTTTCTTAA+TGG | - | chr5_1:63422508-63422527 | Msa0743280:intron | 25.0% |
| ! | ATAAACGATTGATCATAGTT+CGG | - | chr5_1:63422646-63422665 | Msa0743280:intron | 25.0% |
| ! | AAGATGATTTAACAGTTTCA+AGG | + | chr5_1:63422814-63422833 | None:intergenic | 25.0% |
| !!! | TTTTAATTGTCGAATTCTCT+CGG | - | chr5_1:63422835-63422854 | Msa0743280:intron | 25.0% |
| !!! | ACTTTGAAATGATTAGTGAA+TGG | - | chr5_1:63422919-63422938 | Msa0743280:intron | 25.0% |
| ! | TTTCTAACATTGTGACAATT+TGG | - | chr5_1:63422980-63422999 | Msa0743280:intron | 25.0% |
| ! | AAAAGAGTTTAATTGAGAGA+AGG | - | chr5_1:63423032-63423051 | Msa0743280:intron | 25.0% |
| !! | TACATACCATTCTTTTCAAT+GGG | + | chr5_1:63423217-63423236 | None:intergenic | 25.0% |
| ! | CTATTTGATCTTTCAAAAGA+TGG | - | chr5_1:63423534-63423553 | Msa0743280:CDS | 25.0% |
| !!! | ACTAGCCTTTAATATAATAC+CGG | - | chr5_1:63423615-63423634 | Msa0743280:intron | 25.0% |
| !! | AAGATTTCGTTTTGTATTGA+TGG | + | chr5_1:63423712-63423731 | None:intergenic | 25.0% |
| ! | AAAACGAAATCTTTCTCTTT+GGG | - | chr5_1:63423719-63423738 | Msa0743280:intron | 25.0% |
| ! | ATCTTTGTGACATTATTGTT+TGG | - | chr5_1:63423902-63423921 | Msa0743280:intron | 25.0% |
| !! | GTTGATTTCTCAAATCATAA+AGG | - | chr5_1:63423957-63423976 | Msa0743280:intron | 25.0% |
| !! | GTTTTTACAAAGTGTGTTTT+AGG | - | chr5_1:63424292-63424311 | Msa0743280:intron | 25.0% |
| !! | AAAAATTCTTGACTGTTTTC+TGG | + | chr5_1:63424432-63424451 | None:intergenic | 25.0% |
| !!! | GAATTTTTCTTCTGATTTGA+AGG | - | chr5_1:63424444-63424463 | Msa0743280:intron | 25.0% |
| ! | TTATGATTAGGATTGTTCTA+TGG | - | chr5_1:63424497-63424516 | Msa0743280:intron | 25.0% |
| ! | AATGAGGAAAAAGAAACAAA+GGG | + | chr5_1:63424789-63424808 | None:intergenic | 25.0% |
| ! | AAATGAGGAAAAAGAAACAA+AGG | + | chr5_1:63424790-63424809 | None:intergenic | 25.0% |
| ! | ATAATGAACAAAGTTCAAGT+TGG | + | chr5_1:63424966-63424985 | None:intergenic | 25.0% |
| !! | AAGGTAGATTTTTATTAGGT+TGG | - | chr5_1:63425019-63425038 | Msa0743280:intron | 25.0% |
| ! | AATGAATCATGTGAAAAAGA+AGG | - | chr5_1:63425044-63425063 | Msa0743280:intron | 25.0% |
| ! | ATGAATCATGTGAAAAAGAA+GGG | - | chr5_1:63425045-63425064 | Msa0743280:intron | 25.0% |
| !!! | AGTAAGAAAGAGTCATTTTT+TGG | - | chr5_1:63425113-63425132 | Msa0743280:intron | 25.0% |
| !! | ATCAACGTCTTTATTGATTA+TGG | - | chr5_1:63425475-63425494 | Msa0743280:intron | 25.0% |
| ! | AAATGCAAGATTAAGATTTG+AGG | + | chr5_1:63425683-63425702 | None:intergenic | 25.0% |
| ! | ATATGCACGAGTAATAAAAT+TGG | + | chr5_1:63425749-63425768 | None:intergenic | 25.0% |
| ! | TCGTGTAAATAATCTATTTG+AGG | - | chr5_1:63425952-63425971 | Msa0743280:CDS | 25.0% |
| !!! | ATGTATTTTAAGAGAAGGAA+CGG | + | chr5_1:63426000-63426019 | None:intergenic | 25.0% |
| !!! | TGATGATGTATTTTAAGAGA+AGG | + | chr5_1:63426005-63426024 | None:intergenic | 25.0% |
| !! | CTTCATGTATATTTTCAACT+TGG | - | chr5_1:63426039-63426058 | Msa0743280:intron | 25.0% |
| !!! | TTTACTTTTTTTCGTGTAGA+TGG | - | chr5_1:63426119-63426138 | Msa0743280:intron | 25.0% |
| ! | TTTCTAAATGGCATTCTAAT+TGG | + | chr5_1:63426211-63426230 | None:intergenic | 25.0% |
| !!! | TCTATTTTTCAGCTTTATTG+TGG | - | chr5_1:63426499-63426518 | Msa0743280:intron | 25.0% |
| ! | TGATGCTGATATTCTTAAAT+GGG | - | chr5_1:63426593-63426612 | Msa0743280:intron | 25.0% |
| ! | TAAAAATTAGCCAAACTCAA+CGG | + | chr5_1:63426905-63426924 | None:intergenic | 25.0% |
| ! | AAAAGAGTGATAGTTATTGT+CGG | + | chr5_1:63426985-63427004 | None:intergenic | 25.0% |
| !! | CTCTTAGTTCCTTTAAAAAT+AGG | + | chr5_1:63427099-63427118 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTGAACTTATGAC+AGG | - | chr5_1:63427427-63427446 | Msa0743280:intron | 25.0% |
| ! | ACATAATACAAATTCAGTAG+TGG | + | chr5_1:63428041-63428060 | None:intergenic | 25.0% |
| ! | TATGGCTTATCACTTATTAT+TGG | + | chr5_1:63428073-63428092 | None:intergenic | 25.0% |
| !!! | AGTCTTTTGTTTTGTTTTCT+AGG | - | chr5_1:63428180-63428199 | Msa0743280:five_prime_UTR | 25.0% |
| TTCAATGTACTTACCACAAA+CGG | - | chr5_1:63421609-63421628 | Msa0743280:three_prime_UTR | 30.0% | |
| !! | TGTTCATTTTTGGATCATGA+TGG | - | chr5_1:63421769-63421788 | Msa0743280:three_prime_UTR | 30.0% |
| AACTAATGCCAGAAACATAA+AGG | + | chr5_1:63421983-63422002 | None:intergenic | 30.0% | |
| ! | ATACTTTTGATACCTGCATT+TGG | - | chr5_1:63422080-63422099 | Msa0743280:CDS | 30.0% |
| TACCAAGATGTCAAAATTTG+AGG | - | chr5_1:63422140-63422159 | Msa0743280:CDS | 30.0% | |
| ACCAAGATGTCAAAATTTGA+GGG | - | chr5_1:63422141-63422160 | Msa0743280:CDS | 30.0% | |
| CCAAAATTGTCCTTTGTATA+AGG | + | chr5_1:63422256-63422275 | None:intergenic | 30.0% | |
| ! | CCTTATACAAAGGACAATTT+TGG | - | chr5_1:63422253-63422272 | Msa0743280:intron | 30.0% |
| CAGAATGGTAAAGTTACATA+TGG | - | chr5_1:63422377-63422396 | Msa0743280:CDS | 30.0% | |
| ! | TACATATCTGTTTAAGTTCG+AGG | + | chr5_1:63422611-63422630 | None:intergenic | 30.0% |
| TTGAAATGATTAGTGAATGG+TGG | - | chr5_1:63422922-63422941 | Msa0743280:intron | 30.0% | |
| ! | GAGAAAAGATGGTTTTTGTA+TGG | - | chr5_1:63422956-63422975 | Msa0743280:intron | 30.0% |
| ! | CTCTCAATTAAACTCTTTTC+AGG | + | chr5_1:63423031-63423050 | None:intergenic | 30.0% |
| GTTTAATTGAGAGAAGGTAA+TGG | - | chr5_1:63423038-63423057 | Msa0743280:intron | 30.0% | |
| ATTCTTAGAACCAAGTCAAA+AGG | - | chr5_1:63423087-63423106 | Msa0743280:CDS | 30.0% | |
| ATTACTCCCATTGAAAAGAA+TGG | - | chr5_1:63423208-63423227 | Msa0743280:intron | 30.0% | |
| ! | CTACATACCATTCTTTTCAA+TGG | + | chr5_1:63423218-63423237 | None:intergenic | 30.0% |
| AATGGTATGTAGCATTGTAA+TGG | - | chr5_1:63423226-63423245 | Msa0743280:intron | 30.0% | |
| TCAAATAGATCATTTGTAGC+TGG | + | chr5_1:63423522-63423541 | None:intergenic | 30.0% | |
| ! | CTAGCCTTTAATATAATACC+GGG | - | chr5_1:63423616-63423635 | Msa0743280:intron | 30.0% |
| CAAACCCGGTATTATATTAA+AGG | + | chr5_1:63423623-63423642 | None:intergenic | 30.0% | |
| AACATGACATAAATCAAACC+CGG | + | chr5_1:63423637-63423656 | None:intergenic | 30.0% | |
| CAAAACGAAATCTTTCTCTT+TGG | - | chr5_1:63423718-63423737 | Msa0743280:intron | 30.0% | |
| TAATTGTGTATCTCATTACC+TGG | + | chr5_1:63424220-63424239 | None:intergenic | 30.0% | |
| !!! | TCTTACTTTTTATTGGTCTC+AGG | - | chr5_1:63424327-63424346 | Msa0743280:intron | 30.0% |
| ! | GATGAATTTTCATCTCCAAA+GGG | - | chr5_1:63424399-63424418 | Msa0743280:intron | 30.0% |
| ! | ATGAATTTTCATCTCCAAAG+GGG | - | chr5_1:63424400-63424419 | Msa0743280:intron | 30.0% |
| ATAAAAAGGGTTGGAAAACT+CGG | - | chr5_1:63424868-63424887 | Msa0743280:intron | 30.0% | |
| !! | ATTTTGAGGATCGCAAATAA+AGG | - | chr5_1:63425000-63425019 | Msa0743280:intron | 30.0% |
| TTTCTTACTCCAGTTGAATT+CGG | + | chr5_1:63425102-63425121 | None:intergenic | 30.0% | |
| !!! | AAGAAAGAGTCATTTTTTGG+TGG | - | chr5_1:63425116-63425135 | Msa0743280:intron | 30.0% |
| ACACAACATTTATTCACCAT+AGG | + | chr5_1:63425236-63425255 | None:intergenic | 30.0% | |
| CTAACATGAAAAAGTTATGC+AGG | + | chr5_1:63425270-63425289 | None:intergenic | 30.0% | |
| GGTTCAATTTCAAACTATAG+AGG | + | chr5_1:63425443-63425462 | None:intergenic | 30.0% | |
| ! | GACGTTGATTGATAATATCT+AGG | + | chr5_1:63425464-63425483 | None:intergenic | 30.0% |
| TTATTACTCGTGCATATTTC+TGG | - | chr5_1:63425752-63425771 | Msa0743280:intron | 30.0% | |
| !! | TCTTTTTAGTATCTGTCGAT+AGG | + | chr5_1:63425841-63425860 | None:intergenic | 30.0% |
| TATTTGAGGATGTCAGAAAT+GGG | - | chr5_1:63425966-63425985 | Msa0743280:CDS | 30.0% | |
| !! | TGTATTTTAAGAGAAGGAAC+GGG | + | chr5_1:63425999-63426018 | None:intergenic | 30.0% |
| ! | AGACAAGATTTTTCCTGAAT+CGG | - | chr5_1:63426159-63426178 | Msa0743280:CDS | 30.0% |
| !! | CAGTTCTCTACTTTTCTAAA+TGG | + | chr5_1:63426223-63426242 | None:intergenic | 30.0% |
| TGAAGCTATAACATGAAGAA+TGG | + | chr5_1:63426346-63426365 | None:intergenic | 30.0% | |
| !!! | ACTAGCTGATTTTTTGGTTT+TGG | + | chr5_1:63426422-63426441 | None:intergenic | 30.0% |
| !!! | TGCAATACTAGCTGATTTTT+TGG | + | chr5_1:63426428-63426447 | None:intergenic | 30.0% |
| GTGATGCTGATATTCTTAAA+TGG | - | chr5_1:63426592-63426611 | Msa0743280:intron | 30.0% | |
| AACAGAAAAGTGAATAGCAT+TGG | - | chr5_1:63426618-63426637 | Msa0743280:intron | 30.0% | |
| ACTGTTATCGTGCATTTAAT+GGG | + | chr5_1:63426702-63426721 | None:intergenic | 30.0% | |
| TACTGTTATCGTGCATTTAA+TGG | + | chr5_1:63426703-63426722 | None:intergenic | 30.0% | |
| ! | GAAAAGTATAAGAAAGAGCA+TGG | + | chr5_1:63426942-63426961 | None:intergenic | 30.0% |
| CTATAGTTTAGCGACTAAAT+TGG | + | chr5_1:63427009-63427028 | None:intergenic | 30.0% | |
| !!! | ACTTCCTCTCCTATTTTTAA+AGG | - | chr5_1:63427087-63427106 | Msa0743280:intron | 30.0% |
| ! | AGTTCCTTTAAAAATAGGAG+AGG | + | chr5_1:63427094-63427113 | None:intergenic | 30.0% |
| GAACTAAGAGACTAATTTGA+TGG | - | chr5_1:63427109-63427128 | Msa0743280:intron | 30.0% | |
| ! | TTCCATATATTTGTTACCTG+AGG | - | chr5_1:63427305-63427324 | Msa0743280:CDS | 30.0% |
| ATCCTCAGGTAACAAATATA+TGG | + | chr5_1:63427310-63427329 | None:intergenic | 30.0% | |
| TTTGTTACCTGAGGATATTA+TGG | - | chr5_1:63427314-63427333 | Msa0743280:CDS | 30.0% | |
| GAAAGTTATTCATCCCTTAA+TGG | - | chr5_1:63427605-63427624 | Msa0743280:five_prime_UTR | 30.0% | |
| GTTGGAAAAATCACCATTAA+GGG | + | chr5_1:63427621-63427640 | None:intergenic | 30.0% | |
| AGTTGGAAAAATCACCATTA+AGG | + | chr5_1:63427622-63427641 | None:intergenic | 30.0% | |
| TCTTCACAACTTGAATTTGA+TGG | - | chr5_1:63427677-63427696 | Msa0743280:five_prime_UTR | 30.0% | |
| AAAACATTATCTCATGCATG+TGG | + | chr5_1:63427752-63427771 | None:intergenic | 30.0% | |
| CTCAAGCTATATATTCATTC+TGG | + | chr5_1:63427783-63427802 | None:intergenic | 30.0% | |
| CATTACATATGTGACATCTT+TGG | + | chr5_1:63427827-63427846 | None:intergenic | 30.0% | |
| AAATGAGAGGCAAAAGATTA+AGG | - | chr5_1:63427924-63427943 | Msa0743280:intron | 30.0% | |
| AATGAGAGGCAAAAGATTAA+GGG | - | chr5_1:63427925-63427944 | Msa0743280:intron | 30.0% | |
| AGAAATGAGAGAGATCAATA+AGG | - | chr5_1:63427950-63427969 | Msa0743280:intron | 30.0% | |
| GAAATGAGAGAGATCAATAA+GGG | - | chr5_1:63427951-63427970 | Msa0743280:intron | 30.0% | |
| AGAGAGAGAGATTTCTTGAT+GGG | + | chr5_1:63421564-63421583 | None:intergenic | 35.0% | |
| GTACATTGAATGAAGGAACA+TGG | + | chr5_1:63421599-63421618 | None:intergenic | 35.0% | |
| GTGGTAAGTACATTGAATGA+AGG | + | chr5_1:63421606-63421625 | None:intergenic | 35.0% | |
| ! | GTGTGATGCATTTGAAATCT+TGG | + | chr5_1:63421727-63421746 | None:intergenic | 35.0% |
| !! | GTTTTTGTTTGTGCTTTGTC+AGG | - | chr5_1:63421902-63421921 | Msa0743280:three_prime_UTR | 35.0% |
| ! | CCAAATCTAGAAGTGGTTTT+AGG | + | chr5_1:63421959-63421978 | None:intergenic | 35.0% |
| CCTAAAACCACTTCTAGATT+TGG | - | chr5_1:63421956-63421975 | Msa0743280:three_prime_UTR | 35.0% | |
| TAAAGGACCAAATCTAGAAG+TGG | + | chr5_1:63421966-63421985 | None:intergenic | 35.0% | |
| ! | GATTTGGTCCTTTATGTTTC+TGG | - | chr5_1:63421972-63421991 | Msa0743280:exon | 35.0% |
| !! | ACCCTCAAATTTTGACATCT+TGG | + | chr5_1:63422145-63422164 | None:intergenic | 35.0% |
| !!! | ACCTATGTTGCTTTTCTTTG+TGG | - | chr5_1:63422328-63422347 | Msa0743280:intron | 35.0% |
| ACCACAAAGAAAAGCAACAT+AGG | + | chr5_1:63422332-63422351 | None:intergenic | 35.0% | |
| !!! | TATGTTGCTTTTCTTTGTGG+TGG | - | chr5_1:63422331-63422350 | Msa0743280:intron | 35.0% |
| TGTACAGTGAAGATGAGATT+AGG | - | chr5_1:63422444-63422463 | Msa0743280:intron | 35.0% | |
| GTACAGTGAAGATGAGATTA+GGG | - | chr5_1:63422445-63422464 | Msa0743280:intron | 35.0% | |
| TACAGTGAAGATGAGATTAG+GGG | - | chr5_1:63422446-63422465 | Msa0743280:intron | 35.0% | |
| TTGTCAACAAAGTAGGATGT+GGG | - | chr5_1:63422786-63422805 | Msa0743280:intron | 35.0% | |
| AGCGAGACTTTCAAATGATT+AGG | - | chr5_1:63422866-63422885 | Msa0743280:CDS | 35.0% | |
| ! | TTCGGCAGCTTTTATATAGA+AGG | - | chr5_1:63422892-63422911 | Msa0743280:CDS | 35.0% |
| !!! | ACGAGACCGAAGTTTTATTT+TGG | - | chr5_1:63423061-63423080 | Msa0743280:CDS | 35.0% |
| !! | GGAAGATATTGACTCAAGAA+TGG | + | chr5_1:63423492-63423511 | None:intergenic | 35.0% |
| CTTGAGTCAATATCTTCCTT+TGG | - | chr5_1:63423494-63423513 | Msa0743280:CDS | 35.0% | |
| TTCTTCTGTGGTATATAACC+AGG | - | chr5_1:63423559-63423578 | Msa0743280:intron | 35.0% | |
| TCTTCTGTGGTATATAACCA+GGG | - | chr5_1:63423560-63423579 | Msa0743280:intron | 35.0% | |
| CCATACTTTATGCCTCAATT+CGG | - | chr5_1:63423755-63423774 | Msa0743280:CDS | 35.0% | |
| ! | ATCTGAAATTACCAGTAGAG+TGG | + | chr5_1:63424134-63424153 | None:intergenic | 35.0% |
| GTAATTTCAGATCCAACTTC+TGG | - | chr5_1:63424142-63424161 | Msa0743280:CDS | 35.0% | |
| !! | TCTTAATTTGTCTCCTGACA+AGG | - | chr5_1:63424363-63424382 | Msa0743280:intron | 35.0% |
| ! | GGATGAATTTTCATCTCCAA+AGG | - | chr5_1:63424398-63424417 | Msa0743280:intron | 35.0% |
| AGGAAATAATTCCATGTGGA+GGG | + | chr5_1:63424616-63424635 | None:intergenic | 35.0% | |
| AAGGAAATAATTCCATGTGG+AGG | + | chr5_1:63424617-63424636 | None:intergenic | 35.0% | |
| TGGAAGGAAATAATTCCATG+TGG | + | chr5_1:63424620-63424639 | None:intergenic | 35.0% | |
| AAACAAAGGGAAACAATAGC+CGG | + | chr5_1:63424776-63424795 | None:intergenic | 35.0% | |
| AACAGATCATGATGCAAATG+AGG | + | chr5_1:63424805-63424824 | None:intergenic | 35.0% | |
| GCAGGATATATAAAAAGGGT+TGG | - | chr5_1:63424859-63424878 | Msa0743280:intron | 35.0% | |
| TAATTGCAGAAGTTATTGGC+AGG | - | chr5_1:63424913-63424932 | Msa0743280:intron | 35.0% | |
| AATTGCAGAAGTTATTGGCA+GGG | - | chr5_1:63424914-63424933 | Msa0743280:intron | 35.0% | |
| TTCACCATAGGATTAGATAG+TGG | + | chr5_1:63425224-63425243 | None:intergenic | 35.0% | |
| ATTGGCATCTTTAGTATCCA+AGG | + | chr5_1:63425578-63425597 | None:intergenic | 35.0% | |
| ! | CACAAGATTTGCTCTTTCAT+TGG | + | chr5_1:63425596-63425615 | None:intergenic | 35.0% |
| ! | ATTAAGATTTGAGGTTCCCT+CGG | + | chr5_1:63425674-63425693 | None:intergenic | 35.0% |
| TCGCTCAATTATTTCATCAC+AGG | - | chr5_1:63425704-63425723 | Msa0743280:intron | 35.0% | |
| !! | AAGAGAGATGCTTTAGAATG+TGG | - | chr5_1:63425906-63425925 | Msa0743280:CDS | 35.0% |
| AGAATGTGGATCAATAGTCT+TGG | - | chr5_1:63425920-63425939 | Msa0743280:CDS | 35.0% | |
| CTATTTGAGGATGTCAGAAA+TGG | - | chr5_1:63425965-63425984 | Msa0743280:CDS | 35.0% | |
| ! | TTTTTCCTGAATCGGTTAAC+TGG | - | chr5_1:63426167-63426186 | Msa0743280:CDS | 35.0% |
| CTAAATGGCATTCTAATTGG+AGG | + | chr5_1:63426208-63426227 | None:intergenic | 35.0% | |
| TGCAATCAAGTCATAAGAGT+CGG | - | chr5_1:63426241-63426260 | Msa0743280:CDS | 35.0% | |
| ! | TTTTCACTAGTCAATGTAGC+TGG | - | chr5_1:63426277-63426296 | Msa0743280:CDS | 35.0% |
| GGAAATAAGAAGCTCATTCT+TGG | - | chr5_1:63426316-63426335 | Msa0743280:CDS | 35.0% | |
| ! | AATTTGAGATCTCATTCCCA+AGG | - | chr5_1:63426558-63426577 | Msa0743280:intron | 35.0% |
| ATCACTTATCTCCTTTCCTT+GGG | + | chr5_1:63426577-63426596 | None:intergenic | 35.0% | |
| ATCTCACATTCAGAGCTTTA+AGG | - | chr5_1:63426647-63426666 | Msa0743280:intron | 35.0% | |
| CTGTTATCGTGCATTTAATG+GGG | + | chr5_1:63426701-63426720 | None:intergenic | 35.0% | |
| ! | TTGGATGCAATTTTGTGTAC+AGG | - | chr5_1:63426755-63426774 | Msa0743280:intron | 35.0% |
| AATTGGAACCTAGTTACCAA+GGG | - | chr5_1:63426843-63426862 | Msa0743280:intron | 35.0% | |
| TATACCTCCATAATATCCTC+AGG | + | chr5_1:63427324-63427343 | None:intergenic | 35.0% | |
| ATACGAATGAATCTCACTGA+TGG | + | chr5_1:63427354-63427373 | None:intergenic | 35.0% | |
| TTGCAGCCAGTATAATGTAT+TGG | - | chr5_1:63427474-63427493 | Msa0743280:intron | 35.0% | |
| GAGACTCCAATACATTATAC+TGG | + | chr5_1:63427483-63427502 | None:intergenic | 35.0% | |
| ACTTTCATCTTCACCACAAA+CGG | + | chr5_1:63427591-63427610 | None:intergenic | 35.0% | |
| TCAAAATAACTCATCACCGA+CGG | + | chr5_1:63427708-63427727 | None:intergenic | 35.0% | |
| ! | TACAAATTCAGTAGTGGAAC+TGG | + | chr5_1:63428035-63428054 | None:intergenic | 35.0% |
| GAGAGAGAGATTTCTTGATG+GGG | + | chr5_1:63421563-63421582 | None:intergenic | 40.0% | |
| GAGAGAGAGAGATTTCTTGA+TGG | + | chr5_1:63421565-63421584 | None:intergenic | 40.0% | |
| ! | GTTTAAGACTCAACCGTTTG+TGG | + | chr5_1:63421625-63421644 | None:intergenic | 40.0% |
| AGAGAAAGAGATCCAAATGC+AGG | + | chr5_1:63422095-63422114 | None:intergenic | 40.0% | |
| GAAGTTCAACCTGTGTAAAC+TGG | + | chr5_1:63422197-63422216 | None:intergenic | 40.0% | |
| ACAGTGAAGATGAGATTAGG+GGG | - | chr5_1:63422447-63422466 | Msa0743280:intron | 40.0% | |
| AAATACTACATTCGAGCGTC+TGG | - | chr5_1:63422759-63422778 | Msa0743280:intron | 40.0% | |
| TGGTCACTTGTCAACAAAGT+AGG | - | chr5_1:63422779-63422798 | Msa0743280:intron | 40.0% | |
| CTTGTCAACAAAGTAGGATG+TGG | - | chr5_1:63422785-63422804 | Msa0743280:intron | 40.0% | |
| TAATTGTCGAATTCTCTCGG+TGG | - | chr5_1:63422838-63422857 | Msa0743280:CDS | 40.0% | |
| ! | CAATGGCTTTTGAATCCACT+TGG | - | chr5_1:63423129-63423148 | Msa0743280:CDS | 40.0% |
| ACTACACTCAAACAACCAAG+TGG | + | chr5_1:63423147-63423166 | None:intergenic | 40.0% | |
| AACCAAGCTACAACGAAACA+AGG | - | chr5_1:63423348-63423367 | Msa0743280:intron | 40.0% | |
| GCTTTCGTTAAGGAATGATG+AGG | + | chr5_1:63423388-63423407 | None:intergenic | 40.0% | |
| ! | ACGATTAGCGGATCAGAAAA+GGG | - | chr5_1:63423426-63423445 | Msa0743280:CDS | 40.0% |
| TCAAGAATGGATCATCACCA+AGG | + | chr5_1:63423479-63423498 | None:intergenic | 40.0% | |
| TCATTTGTAGCTGGATCCAA+AGG | + | chr5_1:63423513-63423532 | None:intergenic | 40.0% | |
| CAAAAGATGGCATTCTTCTG+TGG | - | chr5_1:63423547-63423566 | Msa0743280:CDS | 40.0% | |
| TTATCAATGTTGCTGTGCCT+GGG | - | chr5_1:63423670-63423689 | Msa0743280:intron | 40.0% | |
| CCGAATTGAGGCATAAAGTA+TGG | + | chr5_1:63423758-63423777 | None:intergenic | 40.0% | |
| TTTATGCCTCAATTCGGCTA+AGG | - | chr5_1:63423761-63423780 | Msa0743280:CDS | 40.0% | |
| GGATGCACAGTTGTTAACAT+TGG | - | chr5_1:63423789-63423808 | Msa0743280:CDS | 40.0% | |
| ! | CTCTTTTTCTTCCACTCTAC+TGG | - | chr5_1:63424120-63424139 | Msa0743280:CDS | 40.0% |
| CATCTTAGTAGAACCTTGTC+AGG | + | chr5_1:63424379-63424398 | None:intergenic | 40.0% | |
| CTGACAAGGTTCTACTAAGA+TGG | - | chr5_1:63424377-63424396 | Msa0743280:intron | 40.0% | |
| ! | AATTTTCATCTCCAAAGGGG+AGG | - | chr5_1:63424403-63424422 | Msa0743280:intron | 40.0% |
| ! | GTACAACTTTTGTTCACCGT+TGG | - | chr5_1:63424560-63424579 | Msa0743280:intron | 40.0% |
| TGGTGAGACAACTTAACCAA+CGG | + | chr5_1:63424579-63424598 | None:intergenic | 40.0% | |
| !! | GGAAGTGATTTTGGTATGGA+AGG | + | chr5_1:63424636-63424655 | None:intergenic | 40.0% |
| !! | GTTGGGAAGTGATTTTGGTA+TGG | + | chr5_1:63424640-63424659 | None:intergenic | 40.0% |
| GGTATGTTCCGAATCATGAT+CGG | - | chr5_1:63424675-63424694 | Msa0743280:intron | 40.0% | |
| !! | CAAAGTTCAAGTTGGACTCA+TGG | + | chr5_1:63424958-63424977 | None:intergenic | 40.0% |
| ATCATGTGAAAAAGAAGGGC+TGG | - | chr5_1:63425049-63425068 | Msa0743280:intron | 40.0% | |
| AGCAATTAGCCGAATTCAAC+TGG | - | chr5_1:63425090-63425109 | Msa0743280:intron | 40.0% | |
| !!! | AGAGTCATTTTTTGGTGGAG+AGG | - | chr5_1:63425121-63425140 | Msa0743280:intron | 40.0% |
| TGGCTTGATTGAAAGACAGA+AGG | - | chr5_1:63425158-63425177 | Msa0743280:intron | 40.0% | |
| GGCTTGATTGAAAGACAGAA+GGG | - | chr5_1:63425159-63425178 | Msa0743280:intron | 40.0% | |
| AGGGAAATGATTCCATACAG+TGG | - | chr5_1:63425178-63425197 | Msa0743280:intron | 40.0% | |
| GGGAAATGATTCCATACAGT+GGG | - | chr5_1:63425179-63425198 | Msa0743280:intron | 40.0% | |
| CTTGAGCATGCAGAAAGAAT+GGG | - | chr5_1:63425616-63425635 | Msa0743280:intron | 40.0% | |
| !! | CAAAAGGTACTTGAGCACAA+GGG | - | chr5_1:63425642-63425661 | Msa0743280:intron | 40.0% |
| ! | TGGAATTTTCCTGCTACAGA+TGG | - | chr5_1:63426059-63426078 | Msa0743280:intron | 40.0% |
| ! | TGTTTCCAGTTAACCGATTC+AGG | + | chr5_1:63426175-63426194 | None:intergenic | 40.0% |
| TGAATCGGTTAACTGGAAAC+AGG | - | chr5_1:63426174-63426193 | Msa0743280:CDS | 40.0% | |
| CATCACTTATCTCCTTTCCT+TGG | + | chr5_1:63426578-63426597 | None:intergenic | 40.0% | |
| CAATTGGAACCTAGTTACCA+AGG | - | chr5_1:63426842-63426861 | Msa0743280:intron | 40.0% | |
| AAACATACCACTTTGACCCT+TGG | + | chr5_1:63426862-63426881 | None:intergenic | 40.0% | |
| CGGCAACTATTGCATTTGTA+TGG | + | chr5_1:63426885-63426904 | None:intergenic | 40.0% | |
| TAGGAGAGGAAGTGATAGTT+CGG | + | chr5_1:63427080-63427099 | None:intergenic | 40.0% | |
| TAGTTCATGCGCTAAATCGA+AGG | - | chr5_1:63427169-63427188 | Msa0743280:intron | 40.0% | |
| ! | TGCGACACTGATTATGTAAG+TGG | + | chr5_1:63427271-63427290 | None:intergenic | 40.0% |
| GTTACCTGAGGATATTATGG+AGG | - | chr5_1:63427317-63427336 | Msa0743280:CDS | 40.0% | |
| GGTATCATCAACACTCAAGT+TGG | + | chr5_1:63427639-63427658 | None:intergenic | 40.0% | |
| AGAGACTGTTGTATCAGAAG+TGG | + | chr5_1:63427660-63427679 | None:intergenic | 40.0% | |
| ACATCTTTGGCATGTATAGC+TGG | + | chr5_1:63427814-63427833 | None:intergenic | 40.0% | |
| AGAGGAATGTGCAAAATGAG+AGG | - | chr5_1:63427911-63427930 | Msa0743280:intron | 40.0% | |
| AGAGAGATTTCTTGATGGGG+TGG | + | chr5_1:63421560-63421579 | None:intergenic | 45.0% | |
| GTGCTTTGTCAGGATAACGT+TGG | - | chr5_1:63421912-63421931 | Msa0743280:three_prime_UTR | 45.0% | |
| GCTTCAAAGCCAGTTTACAC+AGG | - | chr5_1:63422185-63422204 | Msa0743280:CDS | 45.0% | |
| GGTTGTTTGAGTGTAGTACG+TGG | - | chr5_1:63423150-63423169 | Msa0743280:CDS | 45.0% | |
| GAGTGTAGTACGTGGAAACT+CGG | - | chr5_1:63423158-63423177 | Msa0743280:CDS | 45.0% | |
| AGTACGTGGAAACTCGGATT+TGG | - | chr5_1:63423164-63423183 | Msa0743280:CDS | 45.0% | |
| ! | CTCCTTGTTTCGTTGTAGCT+TGG | + | chr5_1:63423353-63423372 | None:intergenic | 45.0% |
| CAAGCTACAACGAAACAAGG+AGG | - | chr5_1:63423351-63423370 | Msa0743280:intron | 45.0% | |
| GGGTGGTTATGCTTTCGTTA+AGG | + | chr5_1:63423398-63423417 | None:intergenic | 45.0% | |
| ACCCTTCTTCACACGATTAG+CGG | - | chr5_1:63423414-63423433 | Msa0743280:CDS | 45.0% | |
| TCCGCTAATCGTGTGAAGAA+GGG | + | chr5_1:63423418-63423437 | None:intergenic | 45.0% | |
| ATCCGCTAATCGTGTGAAGA+AGG | + | chr5_1:63423419-63423438 | None:intergenic | 45.0% | |
| ! | CACGATTAGCGGATCAGAAA+AGG | - | chr5_1:63423425-63423444 | Msa0743280:CDS | 45.0% |
| GCTCACATAAACAGCTACCT+TGG | - | chr5_1:63423459-63423478 | Msa0743280:CDS | 45.0% | |
| CTTATCAATGTTGCTGTGCC+TGG | - | chr5_1:63423669-63423688 | Msa0743280:intron | 45.0% | |
| ! | CAATAGCCTTAGCCGAATTG+AGG | + | chr5_1:63423770-63423789 | None:intergenic | 45.0% |
| CTCAATTCGGCTAAGGCTAT+TGG | - | chr5_1:63423768-63423787 | Msa0743280:CDS | 45.0% | |
| TAACATTGGCGCACAAGACT+TGG | - | chr5_1:63423803-63423822 | Msa0743280:CDS | 45.0% | |
| GTTTATGTTGCAGCCTCATC+TGG | - | chr5_1:63423927-63423946 | Msa0743280:intron | 45.0% | |
| ATCAACCCTAGAACCAGATG+AGG | + | chr5_1:63423943-63423962 | None:intergenic | 45.0% | |
| ! | CAAGCTGAGGTGTCTTCTTA+AGG | + | chr5_1:63424178-63424197 | None:intergenic | 45.0% |
| TAAGAAGACACCTCAGCTTG+TGG | - | chr5_1:63424178-63424197 | Msa0743280:intron | 45.0% | |
| TCAACCAATTCCACAAGCTG+AGG | + | chr5_1:63424191-63424210 | None:intergenic | 45.0% | |
| !! | GGAATTGGTTGATGATAGCC+AGG | - | chr5_1:63424199-63424218 | Msa0743280:intron | 45.0% |
| !! | TTTTCTGGTAACCTCCCCTT+TGG | + | chr5_1:63424417-63424436 | None:intergenic | 45.0% |
| ! | AAGGGGTTGGGAAGTGATTT+TGG | + | chr5_1:63424645-63424664 | None:intergenic | 45.0% |
| AACATACCGAGTGTTCGGAA+GGG | + | chr5_1:63424663-63424682 | None:intergenic | 45.0% | |
| TTCGGAACATACCGAGTGTT+CGG | + | chr5_1:63424668-63424687 | None:intergenic | 45.0% | |
| ! | GATGATGGCCGATCATGATT+CGG | + | chr5_1:63424686-63424705 | None:intergenic | 45.0% |
| GCACATGAAGTCTCTCATTC+CGG | - | chr5_1:63424754-63424773 | Msa0743280:intron | 45.0% | |
| AAAGGGTTGGAAAACTCGGA+AGG | - | chr5_1:63424872-63424891 | Msa0743280:intron | 45.0% | |
| AAGGGTTGGAAAACTCGGAA+GGG | - | chr5_1:63424873-63424892 | Msa0743280:intron | 45.0% | |
| !!! | GTCATTTTTTGGTGGAGAGG+CGG | - | chr5_1:63425124-63425143 | Msa0743280:intron | 45.0% |
| ! | TTGATGGTACACCCACTGTA+TGG | + | chr5_1:63425193-63425212 | None:intergenic | 45.0% |
| AGTGGGTGTACCATCAAATG+TGG | - | chr5_1:63425196-63425215 | Msa0743280:intron | 45.0% | |
| ! | GATAGTGGCACCACATTTGA+TGG | + | chr5_1:63425209-63425228 | None:intergenic | 45.0% |
| !! | GGTGCCACTATCTAATCCTA+TGG | - | chr5_1:63425217-63425236 | Msa0743280:intron | 45.0% |
| TCTTTAGTATCCAAGGTGGC+TGG | + | chr5_1:63425571-63425590 | None:intergenic | 45.0% | |
| GGCATCTTTAGTATCCAAGG+TGG | + | chr5_1:63425575-63425594 | None:intergenic | 45.0% | |
| GCTTGAGCATGCAGAAAGAA+TGG | - | chr5_1:63425615-63425634 | Msa0743280:intron | 45.0% | |
| !! | CAGAAAGAATGGGCTGCAAA+AGG | - | chr5_1:63425626-63425645 | Msa0743280:intron | 45.0% |
| !! | GCAAAAGGTACTTGAGCACA+AGG | - | chr5_1:63425641-63425660 | Msa0743280:intron | 45.0% |
| ATTAGGGCCTTAAGCAATGC+AGG | - | chr5_1:63425810-63425829 | Msa0743280:intron | 45.0% | |
| AACTTGCATCCATCTGTAGC+AGG | + | chr5_1:63426071-63426090 | None:intergenic | 45.0% | |
| GCTGGCAATGATATTGTGCA+AGG | - | chr5_1:63426295-63426314 | Msa0743280:CDS | 45.0% | |
| GTATTGCATTGTGTGTGTCG+TGG | - | chr5_1:63426440-63426459 | Msa0743280:intron | 45.0% | |
| GAGATCTCATTCCCAAGGAA+AGG | - | chr5_1:63426563-63426582 | Msa0743280:intron | 45.0% | |
| CAGGATAAGAGCTTGTCAAG+TGG | - | chr5_1:63426774-63426793 | Msa0743280:intron | 45.0% | |
| TAGAGCCAAGGGTTGTCAAT+TGG | - | chr5_1:63426826-63426845 | Msa0743280:intron | 45.0% | |
| AGGTTCCAATTGACAACCCT+TGG | + | chr5_1:63426834-63426853 | None:intergenic | 45.0% | |
| ! | CACTTTGACCCTTGGTAACT+AGG | + | chr5_1:63426854-63426873 | None:intergenic | 45.0% |
| CTAGTTACCAAGGGTCAAAG+TGG | - | chr5_1:63426852-63426871 | Msa0743280:intron | 45.0% | |
| GCAATAGTTGCCGTTGAGTT+TGG | - | chr5_1:63426892-63426911 | Msa0743280:intron | 45.0% | |
| CGAATGAATCTCACTGATGG+TGG | + | chr5_1:63427351-63427370 | None:intergenic | 45.0% | |
| CGTTGTCTTCAGTCTGTTGT+TGG | + | chr5_1:63427505-63427524 | None:intergenic | 45.0% | |
| ATCTTCACCACAAACGGAAG+GGG | + | chr5_1:63427585-63427604 | None:intergenic | 45.0% | |
| CATCTTCACCACAAACGGAA+GGG | + | chr5_1:63427586-63427605 | None:intergenic | 45.0% | |
| TCATCTTCACCACAAACGGA+AGG | + | chr5_1:63427587-63427606 | None:intergenic | 45.0% | |
| TCTTTGGCATGTATAGCTGG+AGG | + | chr5_1:63427811-63427830 | None:intergenic | 45.0% | |
| !! | AAATGTAATAATAAATTAAA+AGG | + | chr5_1:63423301-63423320 | None:intergenic | 5.0% |
| GCTAATCGTGTGAAGAAGGG+TGG | + | chr5_1:63423415-63423434 | None:intergenic | 50.0% | |
| ATGCGAAAATCAGCAGACCC+TGG | + | chr5_1:63423580-63423599 | None:intergenic | 50.0% | |
| !! | TTGCAGCCTCATCTGGTTCT+AGG | - | chr5_1:63423934-63423953 | Msa0743280:intron | 50.0% |
| !! | TGCAGCCTCATCTGGTTCTA+GGG | - | chr5_1:63423935-63423954 | Msa0743280:intron | 50.0% |
| GGCTAAGATCTGCCAGAAGT+TGG | + | chr5_1:63424157-63424176 | None:intergenic | 50.0% | |
| GACACCTCAGCTTGTGGAAT+TGG | - | chr5_1:63424184-63424203 | Msa0743280:intron | 50.0% | |
| ! | GGAGGGTGTAGCATCGAATA+TGG | + | chr5_1:63424599-63424618 | None:intergenic | 50.0% |
| ACATACCGAGTGTTCGGAAG+GGG | + | chr5_1:63424662-63424681 | None:intergenic | 50.0% | |
| GAACATACCGAGTGTTCGGA+AGG | + | chr5_1:63424664-63424683 | None:intergenic | 50.0% | |
| TTGGTTGTTTGCAGCACGCA+AGG | - | chr5_1:63424724-63424743 | Msa0743280:intron | 50.0% | |
| !!! | ATTTTTTGGTGGAGAGGCGG+AGG | - | chr5_1:63425127-63425146 | Msa0743280:intron | 50.0% |
| !!! | TTTTTTGGTGGAGAGGCGGA+GGG | - | chr5_1:63425128-63425147 | Msa0743280:intron | 50.0% |
| GACTGCAATGTTCAGGAGCA+AGG | + | chr5_1:63425549-63425568 | None:intergenic | 50.0% | |
| AGCACAAGGGACATTACCGA+GGG | - | chr5_1:63425655-63425674 | Msa0743280:intron | 50.0% | |
| ! | GTCAAGTGGACTCTTCTTCC+TGG | - | chr5_1:63426788-63426807 | Msa0743280:intron | 50.0% |
| TTCTCAGTGCAGTAGAGCCA+AGG | - | chr5_1:63426814-63426833 | Msa0743280:intron | 50.0% | |
| TCTCAGTGCAGTAGAGCCAA+GGG | - | chr5_1:63426815-63426834 | Msa0743280:intron | 50.0% | |
| ATCAGTGTCGCACGAAAGCT+TGG | - | chr5_1:63427279-63427298 | Msa0743280:CDS | 50.0% | |
| !! | TTGGTAGTGAGAGTGCTAGC+AGG | + | chr5_1:63427542-63427561 | None:intergenic | 50.0% |
| !! | GAATTTGATGGCGTTGCCGT+CGG | - | chr5_1:63427689-63427708 | Msa0743280:five_prime_UTR | 50.0% |
| ! | GGCGCACAAGACTTGGTTGA+CGG | - | chr5_1:63423810-63423829 | Msa0743280:CDS | 55.0% |
| TCGATGCTACACCCTCCACA+TGG | - | chr5_1:63424602-63424621 | Msa0743280:intron | 55.0% | |
| TTGCCACTGTCGCAGGATGA+TGG | + | chr5_1:63424701-63424720 | None:intergenic | 55.0% | |
| TCATCCTGCGACAGTGGCAA+CGG | - | chr5_1:63424701-63424720 | Msa0743280:intron | 55.0% | |
| GTGGCTGGACTGCAATGTTC+AGG | + | chr5_1:63425556-63425575 | None:intergenic | 55.0% | |
| ACATTGCAGTCCAGCCACCT+TGG | - | chr5_1:63425558-63425577 | Msa0743280:intron | 55.0% | |
| GAGCACAAGGGACATTACCG+AGG | - | chr5_1:63425654-63425673 | Msa0743280:intron | 55.0% | |
| GGCCTTAAGCAATGCAGGAG+TGG | - | chr5_1:63425815-63425834 | Msa0743280:intron | 55.0% | |
| GGCCACTCCTGCATTGCTTA+AGG | + | chr5_1:63425820-63425839 | None:intergenic | 55.0% | |
| GTGTGTCGTGGAGACGAACT+TGG | - | chr5_1:63426452-63426471 | Msa0743280:intron | 55.0% | |
| CTACTGCACTGAGAAGCTCC+AGG | + | chr5_1:63426809-63426828 | None:intergenic | 55.0% | |
| !! | GTGAGAGTGCTAGCAGGTGA+AGG | + | chr5_1:63427536-63427555 | None:intergenic | 55.0% |
| GCTCGCTCGTCTATAGTCCC+AGG | + | chr5_1:63423690-63423709 | None:intergenic | 60.0% | |
| CCGAGTGTTCGGAAGGGGTT+GGG | + | chr5_1:63424657-63424676 | None:intergenic | 60.0% | |
| CCCAACCCCTTCCGAACACT+CGG | - | chr5_1:63424654-63424673 | Msa0743280:intron | 60.0% | |
| ACCGAGTGTTCGGAAGGGGT+TGG | + | chr5_1:63424658-63424677 | None:intergenic | 60.0% | |
| CGGCTAATTGCTGCTCTCGC+AGG | + | chr5_1:63425082-63425101 | None:intergenic | 60.0% | |
| GAGAGGCGGAGGGTAGTGAA+TGG | - | chr5_1:63425138-63425157 | Msa0743280:intron | 60.0% | |
| AGGGGAAGCTTCGGGTGTGT+TGG | + | chr5_1:63427561-63427580 | None:intergenic | 60.0% | |
| ACCACAAACGGAAGGGGCAG+GGG | + | chr5_1:63427579-63427598 | None:intergenic | 60.0% | |
| CACCACAAACGGAAGGGGCA+GGG | + | chr5_1:63427580-63427599 | None:intergenic | 60.0% | |
| TCACCACAAACGGAAGGGGC+AGG | + | chr5_1:63427581-63427600 | None:intergenic | 60.0% | |
| CGGCCATCATCCTGCGACAG+TGG | - | chr5_1:63424695-63424714 | Msa0743280:intron | 65.0% | |
| CCAACCGTTGCCACTGTCGC+AGG | + | chr5_1:63424708-63424727 | None:intergenic | 65.0% | |
| CCTGCGACAGTGGCAACGGT+TGG | - | chr5_1:63424705-63424724 | Msa0743280:intron | 65.0% | |
| GAAGGGGCAGGGGAAGCTTC+GGG | + | chr5_1:63427569-63427588 | None:intergenic | 65.0% | |
| GGAAGGGGCAGGGGAAGCTT+CGG | + | chr5_1:63427570-63427589 | None:intergenic | 65.0% | |
| TCCCCTGCCCCTTCCGTTTG+TGG | - | chr5_1:63427575-63427594 | Msa0743280:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 63421504 | 63428205 | 63421504 | ID=Msa0743280;Name=Msa0743280 |
| chr5_1 | mRNA | 63421504 | 63428205 | 63421504 | ID=Msa0743280-mRNA-1;Parent=Msa0743280;Name=Msa0743280-mRNA-1;_AED=0.10;_eAED=0.10;_QI=392|1|1|1|0.92|0.86|15|478|695 |
| chr5_1 | exon | 63421504 | 63422260 | 63421504 | ID=Msa0743280-mRNA-1:exon:18765;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63422371 | 63422462 | 63422371 | ID=Msa0743280-mRNA-1:exon:18764;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63422836 | 63422932 | 63422836 | ID=Msa0743280-mRNA-1:exon:18763;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63423041 | 63423198 | 63423041 | ID=Msa0743280-mRNA-1:exon:18762;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63423372 | 63423571 | 63423372 | ID=Msa0743280-mRNA-1:exon:18761;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63423722 | 63423877 | 63423722 | ID=Msa0743280-mRNA-1:exon:18760;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63423984 | 63424195 | 63423984 | ID=Msa0743280-mRNA-1:exon:18759;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63425244 | 63425360 | 63425244 | ID=Msa0743280-mRNA-1:exon:18758;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63425489 | 63425557 | 63425489 | ID=Msa0743280-mRNA-1:exon:18757;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63425731 | 63425769 | 63425731 | ID=Msa0743280-mRNA-1:exon:18756;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63425873 | 63426044 | 63425873 | ID=Msa0743280-mRNA-1:exon:18755;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63426141 | 63426379 | 63426141 | ID=Msa0743280-mRNA-1:exon:18754;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63427180 | 63427350 | 63427180 | ID=Msa0743280-mRNA-1:exon:18753;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63427476 | 63427785 | 63427476 | ID=Msa0743280-mRNA-1:exon:18752;Parent=Msa0743280-mRNA-1 |
| chr5_1 | exon | 63428037 | 63428205 | 63428037 | ID=Msa0743280-mRNA-1:exon:18751;Parent=Msa0743280-mRNA-1 |
| chr5_1 | five_prime_UTR | 63428037 | 63428205 | 63428037 | ID=Msa0743280-mRNA-1:five_prime_utr;Parent=Msa0743280-mRNA-1 |
| chr5_1 | five_prime_UTR | 63427563 | 63427785 | 63427563 | ID=Msa0743280-mRNA-1:five_prime_utr;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63427476 | 63427562 | 63427476 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63427180 | 63427350 | 63427180 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63426141 | 63426379 | 63426141 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63425873 | 63426044 | 63425873 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63425731 | 63425769 | 63425731 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63425489 | 63425557 | 63425489 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63425244 | 63425360 | 63425244 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63423984 | 63424195 | 63423984 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63423722 | 63423877 | 63423722 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63423372 | 63423571 | 63423372 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63423041 | 63423198 | 63423041 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63422836 | 63422932 | 63422836 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63422371 | 63422462 | 63422371 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | CDS | 63421982 | 63422260 | 63421982 | ID=Msa0743280-mRNA-1:cds;Parent=Msa0743280-mRNA-1 |
| chr5_1 | three_prime_UTR | 63421504 | 63421981 | 63421504 | ID=Msa0743280-mRNA-1:three_prime_utr;Parent=Msa0743280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
