AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0404860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0404860 MtrunA17_Chr8g0367451 86.331 278 25 1 1 265 1 278 1.28e-175 489
Msa0404860 MtrunA17_Chr8g0367441 83.871 279 31 2 1 265 1 279 1.25e-169 474
Msa0404860 MtrunA17_Chr8g0367381 85.338 266 32 2 1 265 1 260 1.97e-165 461
Msa0404860 MtrunA17_Chr8g0367491 83.133 249 29 1 30 265 30 278 1.43e-151 428
Msa0404860 MtrunA17_Chr7g0276411 76.062 259 49 1 20 265 6 264 4.26e-144 409
Msa0404860 MtrunA17_Chr8g0367501 77.953 254 43 1 25 265 12 265 3.43e-140 401
Msa0404860 MtrunA17_Chr7g0276401 54.851 268 102 3 14 265 13 277 3.28e-98 293
Msa0404860 MtrunA17_Chr8g0367481 88.652 141 15 1 1 140 1 141 2.87e-87 257
Msa0404860 MtrunA17_Chr3g0128011 47.842 278 128 3 1 265 46 319 1.06e-85 262
Msa0404860 MtrunA17_Chr5g0448091 48.473 262 119 3 18 265 6 265 6.49e-82 251
Msa0404860 MtrunA17_Chr8g0345851 58.659 179 61 1 100 265 14 192 5.50e-69 215
Msa0404860 MtrunA17_Chr8g0367401 80.645 124 24 0 156 279 1 124 6.10e-68 207
Msa0404860 MtrunA17_Chr8g0367411 83.193 119 20 0 25 143 5 123 6.89e-66 202
Msa0404860 MtrunA17_Chr1g0163611 39.453 256 136 4 28 266 19 272 2.49e-56 185
Msa0404860 MtrunA17_Chr1g0163601 39.062 256 137 4 28 266 19 272 1.32e-55 183
Msa0404860 MtrunA17_Chr7g0218211 38.168 262 144 4 19 265 13 271 1.75e-54 180
Msa0404860 MtrunA17_Chr7g0218301 40.684 263 133 7 24 266 19 278 1.83e-53 178
Msa0404860 MtrunA17_Chr3g0085201 41.797 256 130 7 26 265 8 260 4.91e-53 176
Msa0404860 MtrunA17_Chr7g0218181 39.535 258 133 6 24 265 19 269 6.28e-53 176
Msa0404860 MtrunA17_Chr7g0218271 41.154 260 131 6 27 266 21 278 8.48e-53 176
Msa0404860 MtrunA17_Chr3g0085211 39.453 256 135 6 26 265 22 273 1.06e-52 176
Msa0404860 MtrunA17_Chr7g0218261 36.965 257 145 4 24 266 18 271 1.43e-52 175
Msa0404860 MtrunA17_Chr1g0163621 37.143 280 156 5 5 266 9 286 3.43e-52 175
Msa0404860 MtrunA17_Chr1g0200491 38.846 260 139 6 23 265 18 274 1.02e-51 173
Msa0404860 MtrunA17_Chr2g0307521 36.431 269 148 6 12 265 5 265 3.10e-49 166
Msa0404860 MtrunA17_Chr8g0367421 65.323 124 26 1 156 279 1 107 1.53e-48 157
Msa0404860 MtrunA17_Chr6g0482291 82.558 86 15 0 180 265 1 86 1.48e-47 156
Msa0404860 MtrunA17_Chr7g0218131 35.409 257 148 5 24 265 19 272 5.91e-47 160
Msa0404860 MtrunA17_Chr2g0314271 36.032 247 134 4 35 265 17 255 1.48e-44 154
Msa0404860 MtrunA17_Chr6g0482281 61.314 137 47 3 13 143 14 150 2.48e-40 138
Msa0404860 MtrunA17_Chr3g0130011 33.600 250 141 6 35 267 20 261 5.82e-40 142
Msa0404860 MtrunA17_Chr4g0021981 34.340 265 144 7 18 265 19 270 1.26e-39 141
Msa0404860 MtrunA17_Chr4g0022021 33.962 265 145 8 18 265 19 270 6.60e-38 137
Msa0404860 MtrunA17_Chr3g0130061 33.200 250 142 5 35 267 20 261 8.23e-36 131
Msa0404860 MtrunA17_Chr8g0367471 63.542 96 24 2 180 275 1 85 4.91e-33 116
Msa0404860 MtrunA17_Chr3g0121301 33.047 233 131 6 47 265 40 261 2.67e-30 116
Msa0404860 MtrunA17_Chr8g0367431 85.965 57 8 0 87 143 1 57 4.63e-29 105
Msa0404860 MtrunA17_Chr1g0170941 57.895 76 32 0 188 263 1 76 9.87e-26 97.1
Msa0404860 MtrunA17_Chr5g0432301 27.778 234 150 6 45 265 32 259 2.86e-22 94.7
Msa0404860 MtrunA17_Chr5g0432251 38.938 113 68 1 154 265 146 258 3.42e-21 91.7
Msa0404860 MtrunA17_Chr5g0432211 26.872 227 147 7 45 265 31 244 1.21e-19 87.4
Msa0404860 MtrunA17_Chr7g0223231 26.360 239 150 5 40 265 25 250 1.55e-19 87.0
Msa0404860 MtrunA17_Chr4g0014601 28.279 244 149 7 40 267 26 259 2.74e-18 82.4
Msa0404860 MtrunA17_Chr4g0014641 29.707 239 144 8 45 265 31 263 3.82e-18 83.2
Msa0404860 MtrunA17_Chr7g0223241 26.383 235 155 5 40 265 25 250 8.11e-18 82.4
Msa0404860 MtrunA17_Chr7g0219161 25.106 235 155 4 45 265 31 258 1.17e-17 82.0
Msa0404860 MtrunA17_Chr5g0432241 24.597 248 140 5 45 265 32 259 1.35e-17 81.6
Msa0404860 MtrunA17_Chr4g0040621 30.328 244 139 8 40 265 39 269 1.55e-17 81.6
Msa0404860 MtrunA17_Chr1g0188391 24.427 262 173 8 21 265 9 262 1.98e-17 81.3
Msa0404860 MtrunA17_Chr4g0014591 28.099 242 148 7 40 265 26 257 2.04e-17 81.3
Msa0404860 MtrunA17_Chr4g0014661 28.099 242 148 7 40 265 26 257 2.67e-17 80.9
Msa0404860 MtrunA17_Chr4g0014561 29.630 243 149 8 40 265 26 263 9.32e-17 79.3
Msa0404860 MtrunA17_Chr4g0014681 29.218 243 150 8 40 265 26 263 6.01e-16 77.0
Msa0404860 MtrunA17_Chr7g0219141 24.255 235 157 5 45 265 31 258 7.15e-16 76.6
Msa0404860 MtrunA17_Chr4g0046361 26.667 240 154 5 42 265 28 261 3.55e-15 74.7
Msa0404860 MtrunA17_Chr1g0188371 25.103 243 149 7 44 265 30 260 4.84e-15 74.3
Msa0404860 MtrunA17_Chr1g0170931 35.398 113 68 2 34 143 8 118 7.97e-14 67.0
Msa0404860 MtrunA17_Chr4g0046531 25.738 237 151 5 44 265 392 618 1.09e-13 70.9
Msa0404860 MtrunA17_Chr4g0046531 24.903 257 166 6 24 265 12 256 1.88e-13 70.5
Msa0404860 MtrunA17_Chr4g0046341 28.750 240 152 5 42 265 28 264 2.46e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0404860 AT5G54160.1 47.368 266 119 4 15 265 4 263 7.70e-81 248
Msa0404860 AT1G77520.1 44.867 263 127 4 21 265 20 282 6.69e-71 223
Msa0404860 AT5G53810.1 46.473 241 110 4 44 265 39 279 1.38e-58 191
Msa0404860 AT1G77530.1 42.586 263 133 3 21 265 20 282 1.54e-58 191
Msa0404860 AT1G33030.3 41.154 260 130 6 25 267 1 254 8.78e-58 186
Msa0404860 AT1G63140.1 42.264 265 135 3 21 267 40 304 1.18e-57 187
Msa0404860 AT1G33030.2 40.226 266 136 6 25 273 1 260 1.80e-57 185
Msa0404860 AT1G51990.2 38.976 254 138 3 27 265 12 263 2.37e-57 188
Msa0404860 AT1G51990.1 38.976 254 138 4 27 265 12 263 2.79e-56 185
Msa0404860 AT1G33030.1 40.698 258 130 6 25 265 1 252 1.56e-55 183
Msa0404860 AT1G63140.2 41.825 263 135 3 21 265 20 282 1.85e-55 184
Msa0404860 AT1G63140.4 41.825 263 135 3 21 265 40 302 2.24e-55 184
Msa0404860 AT1G21130.2 42.391 276 132 7 26 280 21 290 1.08e-54 179
Msa0404860 AT1G21120.1 42.692 260 123 6 26 265 21 274 1.54e-51 173
Msa0404860 AT1G21130.1 43.077 260 122 6 26 265 21 274 1.92e-51 173
Msa0404860 AT1G21100.1 43.846 260 120 6 26 265 21 274 8.36e-51 171
Msa0404860 AT1G21120.2 42.692 260 123 6 26 265 69 322 9.10e-51 172
Msa0404860 AT1G21110.1 41.923 260 125 6 26 265 21 274 1.44e-50 171
Msa0404860 AT1G76790.1 41.132 265 122 6 26 265 11 266 1.00e-48 166
Msa0404860 AT5G37170.1 40.551 254 107 8 20 265 18 235 1.97e-48 164
Msa0404860 AT1G77530.2 38.934 244 131 3 21 246 20 263 2.51e-46 157
Msa0404860 AT1G63140.3 38.655 238 128 3 21 240 40 277 5.15e-42 146
Msa0404860 AT3G53140.1 34.962 266 142 6 24 265 2 260 5.50e-40 142
Msa0404860 AT5G37170.2 52.308 130 59 2 137 265 8 135 3.21e-37 132
Msa0404860 AT5G37170.3 62.069 87 32 1 180 265 1 87 6.49e-31 114
Msa0404860 AT1G62900.1 55.238 105 47 0 161 265 2 106 8.85e-30 112
Msa0404860 AT4G35160.1 30.833 240 137 6 46 265 45 275 1.89e-21 93.2
Msa0404860 AT4G35150.1 28.054 221 125 4 46 265 31 218 4.43e-20 88.6

Find 60 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTTCTTCATAACTATTT+TGG 0.151738 3_2:-37792691 None:intergenic
AAGAATGCGATCCAACATTT+TGG 0.214953 3_2:-37788193 None:intergenic
TCGTATTTCTTGCAACAATT+TGG 0.226985 3_2:+37788164 Msa0404860:CDS
AATTCTGATGGTGTTTCATT+AGG 0.271958 3_2:+37788330 Msa0404860:CDS
ATAAAGATTGCATCTCCTTT+AGG 0.274360 3_2:-37793113 None:intergenic
AATGAAACACCATCAGAATT+AGG 0.300158 3_2:-37788327 None:intergenic
GTTGATGTTGGAGGTGGTCT+TGG 0.307601 3_2:+37792753 Msa0404860:CDS
ATGGTTTCAAGGACATAAAA+AGG 0.340214 3_2:+37792727 Msa0404860:CDS
GTATGATTTGTTTGGATTGA+GGG 0.374826 3_2:-37793395 None:intergenic
GACTTAGGTGTGAATGGAAA+TGG 0.390497 3_2:+37787964 Msa0404860:CDS
CTCCATTCTGCAACTGAACT+TGG 0.393804 3_2:+37788078 Msa0404860:CDS
CTTGCTCTTCTTGCATCCCA+TGG 0.398542 3_2:+37788213 Msa0404860:CDS
AGAAAGTTGAGCATCTTTAC+CGG 0.400069 3_2:-37788124 None:intergenic
TGAGAGCTACAATGGTTTCA+AGG 0.426722 3_2:+37792716 Msa0404860:CDS
GTTGATAAGTATGATTTGTT+TGG 0.429616 3_2:-37793403 None:intergenic
CAACATGCCCCTTCGTATCC+TGG 0.434446 3_2:+37792849 Msa0404860:CDS
GTCCCATTCAACATGGTTCA+TGG 0.443754 3_2:+37792594 Msa0404860:CDS
AGTATGATTTGTTTGGATTG+AGG 0.447267 3_2:-37793396 None:intergenic
TTGATGTTGGAGGTGGTCTT+GGG 0.450539 3_2:+37792754 Msa0404860:CDS
TGCGTTTGATTATGCAAGCT+TGG 0.452740 3_2:+37792623 Msa0404860:CDS
CAGCTCTATTGTTCTTCCAA+TGG 0.454532 3_2:+37788053 Msa0404860:CDS
TACCAAAATAGTTATGAAGA+AGG 0.461453 3_2:+37792689 Msa0404860:CDS
GGATTGAGGGCTATTCTCAA+TGG 0.469487 3_2:-37793382 None:intergenic
GAGGGCTATTCTCAATGGAT+TGG 0.473684 3_2:-37793377 None:intergenic
CTAAGTCTATCACATTTGAA+TGG 0.474913 3_2:-37787948 None:intergenic
TCATGGCTGTATTGAAAACT+TGG 0.476007 3_2:-37792659 None:intergenic
AAATTGATACCATGTATATG+AGG 0.480581 3_2:-37792807 None:intergenic
GTGATAGACTTAGGTGTGAA+TGG 0.483111 3_2:+37787958 Msa0404860:CDS
CATTCAAATGTGATAGACTT+AGG 0.487343 3_2:+37787949 Msa0404860:CDS
GTTGCAGAATGGAGTGCCAT+TGG 0.488219 3_2:-37788069 None:intergenic
ATTCAAGATGAACAAAAGCT+TGG 0.489419 3_2:+37788255 Msa0404860:CDS
ATTATGCAAGCTTGGACTCA+AGG 0.492297 3_2:+37792631 Msa0404860:CDS
ATAGTATGACTCCTATTGCT+AGG 0.497886 3_2:+37788295 Msa0404860:CDS
CACCAAGTTCAGTTGCAGAA+TGG 0.512342 3_2:-37788080 None:intergenic
TTTGGATGCTCCCAAAATGT+TGG 0.515517 3_2:+37788182 Msa0404860:CDS
TGCCATGAACCATGTTGAAT+GGG 0.522273 3_2:-37792596 None:intergenic
TTCTCATATGCTATACAACT+TGG 0.524839 3_2:+37788030 Msa0404860:CDS
TCGAATTGTATTCTTAAGCT+CGG 0.529229 3_2:-37792562 None:intergenic
AGGAGATGCAATCTTTATGA+AGG 0.551013 3_2:+37793118 Msa0404860:CDS
TTAAGAATACAATTCGAGAA+GGG 0.552158 3_2:+37792568 Msa0404860:CDS
GTGCCATGAACCATGTTGAA+TGG 0.556197 3_2:-37792597 None:intergenic
AAGGTTCTTGAGAGCTACAA+TGG 0.560355 3_2:+37792708 Msa0404860:CDS
AAAAGGCTTGTTGATGTTGG+AGG 0.582099 3_2:+37792744 Msa0404860:CDS
GTGTGAATGGAAATGGAGAG+AGG 0.584918 3_2:+37787971 Msa0404860:CDS
GTAGGAGTTGAACACGTTGG+CGG 0.587106 3_2:+37793071 Msa0404860:intron
CTTAAGAATACAATTCGAGA+AGG 0.594263 3_2:+37792567 Msa0404860:CDS
AATTGATACCATGTATATGA+GGG 0.599306 3_2:-37792806 None:intergenic
CATACTATAAAGTCTATGAA+AGG 0.601040 3_2:-37788280 None:intergenic
TCAAAACACCCTCATATACA+TGG 0.601896 3_2:+37792798 Msa0404860:CDS
TAAGAATACAATTCGAGAAG+GGG 0.607299 3_2:+37792569 Msa0404860:CDS
ATGTTTGAAAGTGTACCTAA+AGG 0.613827 3_2:+37793098 Msa0404860:CDS
AGGCTTGTTGATGTTGGAGG+TGG 0.616259 3_2:+37792747 Msa0404860:CDS
AGATCATACCAGGATACGAA+GGG 0.620355 3_2:-37792857 None:intergenic
TAAACACTTTAACACACCAT+GGG 0.639948 3_2:-37788229 None:intergenic
AAGAATACAATTCGAGAAGG+GGG 0.659327 3_2:+37792570 Msa0404860:CDS
AAGATCATACCAGGATACGA+AGG 0.663878 3_2:-37792858 None:intergenic
TTGGTAGGAGTTGAACACGT+TGG 0.666569 3_2:+37793068 Msa0404860:intron
GTAAACACTTTAACACACCA+TGG 0.668763 3_2:-37788230 None:intergenic
GGGGCATGTTGAATGACATG+AGG 0.679220 3_2:-37792837 None:intergenic
GATCATACCAGGATACGAAG+GGG 0.731305 3_2:-37792856 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATCATATTTCA+AGG + chr3_2:37788907-37788926 Msa0404860:intron 10.0%
!! TAAATACAACTATATAAAAA+GGG - chr3_2:37789313-37789332 None:intergenic 10.0%
!! TTAAATACAACTATATAAAA+AGG - chr3_2:37789314-37789333 None:intergenic 10.0%
!! ATTATATACAACTATATAAA+AGG - chr3_2:37789428-37789447 None:intergenic 10.0%
!!! TCAAAAATATATTTTTTTAG+AGG + chr3_2:37790059-37790078 Msa0404860:intron 10.0%
!!! CAAAAATATATTTTTTTAGA+GGG + chr3_2:37790060-37790079 Msa0404860:intron 10.0%
!!! AAAAATATATTTTTTTAGAG+GGG + chr3_2:37790061-37790080 Msa0404860:intron 10.0%
!! AAATAAAAAAGAAAAAATAC+AGG + chr3_2:37790650-37790669 Msa0404860:intron 10.0%
!! TGTTATTAAATATTATAAAG+TGG - chr3_2:37791126-37791145 None:intergenic 10.0%
!!! TCAATTTTATAACAAAATAA+GGG - chr3_2:37791249-37791268 None:intergenic 10.0%
!! AAAAAAATGAAATTAACATA+GGG - chr3_2:37791304-37791323 None:intergenic 10.0%
!! TAAAAAAATGAAATTAACAT+AGG - chr3_2:37791305-37791324 None:intergenic 10.0%
!!! TTTTCTAAAGTATTTATTTT+TGG + chr3_2:37792000-37792019 Msa0404860:intron 10.0%
!!! TTCATATTCAATTTTTTTTA+GGG - chr3_2:37792331-37792350 None:intergenic 10.0%
!!! ATTTTTATTTTTTTGAAAGA+AGG + chr3_2:37793269-37793288 Msa0404860:three_prime_UTR 10.0%
!! AATAGATTATAATAATGAGA+AGG - chr3_2:37788413-37788432 None:intergenic 15.0%
!!! ATAATTTAAAGGATTTTTGA+AGG - chr3_2:37789101-37789120 None:intergenic 15.0%
!! AAATACAACTATATAAAAAG+GGG - chr3_2:37789312-37789331 None:intergenic 15.0%
!!! AAAATATATTTTTTTAGAGG+GGG + chr3_2:37790062-37790081 Msa0404860:intron 15.0%
!! TGTGTTTAGTTAAAAATATA+GGG - chr3_2:37791221-37791240 None:intergenic 15.0%
!!! GTCAATTTTATAACAAAATA+AGG - chr3_2:37791250-37791269 None:intergenic 15.0%
!! TAAACGATGTTAAATTATAA+GGG - chr3_2:37791281-37791300 None:intergenic 15.0%
!!! GAAACTTTAACTTAATAAAA+TGG + chr3_2:37791437-37791456 Msa0404860:intron 15.0%
!!! AATAGTTTTTTTTTCATTGT+GGG + chr3_2:37791593-37791612 Msa0404860:intron 15.0%
!!! ATTTTCAATTGAAATGAATT+TGG + chr3_2:37791701-37791720 Msa0404860:intron 15.0%
!! ATAGTCAAAAAGAAAAATAT+GGG - chr3_2:37792197-37792216 None:intergenic 15.0%
!!! TTCATATTCAATTTTTTAAG+GGG - chr3_2:37792302-37792321 None:intergenic 15.0%
!!! GTTCATATTCAATTTTTTAA+GGG - chr3_2:37792303-37792322 None:intergenic 15.0%
!!! TGTTCATATTCAATTTTTTA+AGG - chr3_2:37792304-37792323 None:intergenic 15.0%
!!! GTTCATATTCAATTTTTTTT+AGG - chr3_2:37792332-37792351 None:intergenic 15.0%
!! TTACATATAAATAAGTAATG+TGG + chr3_2:37792948-37792967 Msa0404860:intron 15.0%
!! ATTGAAAAACTATTTAATGT+TGG + chr3_2:37793049-37793068 Msa0404860:intron 15.0%
!!! TTATATCCTTTTATGTCTTT+TGG + chr3_2:37788547-37788566 Msa0404860:intron 20.0%
!!! TTTTTTAGGAGAGAAAAATA+GGG - chr3_2:37788583-37788602 None:intergenic 20.0%
!!! ATTTTTTAGGAGAGAAAAAT+AGG - chr3_2:37788584-37788603 None:intergenic 20.0%
!!! ATAGGAAATTTGTTTTGTTT+GGG - chr3_2:37788777-37788796 None:intergenic 20.0%
!!! TATAGGAAATTTGTTTTGTT+TGG - chr3_2:37788778-37788797 None:intergenic 20.0%
!! TTCATAATTAGAGAGATTAT+AGG - chr3_2:37788795-37788814 None:intergenic 20.0%
!! TTGTTACAAAAGATACAAAA+TGG - chr3_2:37788888-37788907 None:intergenic 20.0%
!! ATAGAGAATGGATAATTTAA+AGG - chr3_2:37789112-37789131 None:intergenic 20.0%
!! AAGTGTCAAATGATTATAAT+GGG - chr3_2:37789213-37789232 None:intergenic 20.0%
!! TAAGTGTCAAATGATTATAA+TGG - chr3_2:37789214-37789233 None:intergenic 20.0%
!!! TATTTTGTGTATTTTATTCG+AGG + chr3_2:37789238-37789257 Msa0404860:intron 20.0%
!!! TAGATAAGTTAGAGATTTTT+TGG - chr3_2:37789529-37789548 None:intergenic 20.0%
!! CAATAATTTCATATTAGAGA+AGG - chr3_2:37789596-37789615 None:intergenic 20.0%
!! AATGATTATATTTCAAAGAG+AGG + chr3_2:37789695-37789714 Msa0404860:intron 20.0%
!! ATGATTATATTTCAAAGAGA+GGG + chr3_2:37789696-37789715 Msa0404860:intron 20.0%
!!! TTTAGATTTTTTGTTGATCT+TGG - chr3_2:37790004-37790023 None:intergenic 20.0%
!! ATCTTAAAAAAGAAAAACTC+AGG - chr3_2:37790431-37790450 None:intergenic 20.0%
!! TGGGATAAATATTTATTACA+AGG + chr3_2:37790793-37790812 Msa0404860:intron 20.0%
!!! AGAATGTGTAATTTTCTAAA+AGG - chr3_2:37790859-37790878 None:intergenic 20.0%
!! AGTATGACTATAAAAAACAT+CGG + chr3_2:37790993-37791012 Msa0404860:intron 20.0%
!! GTGTTTAGTTAAAAATATAG+GGG - chr3_2:37791220-37791239 None:intergenic 20.0%
!! CTGTGTTTAGTTAAAAATAT+AGG - chr3_2:37791222-37791241 None:intergenic 20.0%
!! GTAAACGATGTTAAATTATA+AGG - chr3_2:37791282-37791301 None:intergenic 20.0%
!! AAAGTGCAAAATGAAATTAA+GGG - chr3_2:37791358-37791377 None:intergenic 20.0%
!! GTAAAAGAGAATATAGAAAT+GGG - chr3_2:37791527-37791546 None:intergenic 20.0%
!! AGTAAAAGAGAATATAGAAA+TGG - chr3_2:37791528-37791547 None:intergenic 20.0%
!!! CAATAGTTTTTTTTTCATTG+TGG + chr3_2:37791592-37791611 Msa0404860:intron 20.0%
!!! ATAGTTTTTTTTTCATTGTG+GGG + chr3_2:37791594-37791613 Msa0404860:intron 20.0%
!! AAATGAATTTGGATAAAAAG+AGG + chr3_2:37791712-37791731 Msa0404860:intron 20.0%
!! AATGAATTTGGATAAAAAGA+GGG + chr3_2:37791713-37791732 Msa0404860:intron 20.0%
!! TGTGTTTAAAAAACTAAAGA+GGG + chr3_2:37791744-37791763 Msa0404860:intron 20.0%
!! AGTTAACATTAATGATAGAA+GGG - chr3_2:37791809-37791828 None:intergenic 20.0%
!! AAGTTAACATTAATGATAGA+AGG - chr3_2:37791810-37791829 None:intergenic 20.0%
!!! TCTAAAGTATTTATTTTTGG+TGG + chr3_2:37792003-37792022 Msa0404860:intron 20.0%
!!! CTAAAGTATTTATTTTTGGT+GGG + chr3_2:37792004-37792023 Msa0404860:intron 20.0%
!!! TAAAGTATTTATTTTTGGTG+GGG + chr3_2:37792005-37792024 Msa0404860:intron 20.0%
!! TAGTCAAAAAGAAAAATATG+GGG - chr3_2:37792196-37792215 None:intergenic 20.0%
!! GATAGTCAAAAAGAAAAATA+TGG - chr3_2:37792198-37792217 None:intergenic 20.0%
!!! TTCTTTGGTACAATTTTATT+GGG - chr3_2:37792258-37792277 None:intergenic 20.0%
!!! TTTCTTTGGTACAATTTTAT+TGG - chr3_2:37792259-37792278 None:intergenic 20.0%
!!! TTCGTATTCAATTATTTCTT+TGG - chr3_2:37792273-37792292 None:intergenic 20.0%
!!! ATATTCAATTTTTTTTAGGG+AGG - chr3_2:37792328-37792347 None:intergenic 20.0%
!!! AAATCAATTGCAATTTTCTA+TGG - chr3_2:37792377-37792396 None:intergenic 20.0%
!!! TATTTTGGTATAATTGATCA+TGG - chr3_2:37792679-37792698 None:intergenic 20.0%
!! AAAAACTATTTAATGTTGGT+AGG + chr3_2:37793053-37793072 Msa0404860:intron 20.0%
!!! AATTGTTGTTTTTGCTATAA+TGG + chr3_2:37793193-37793212 Msa0404860:exon 20.0%
! CATACTATAAAGTCTATGAA+AGG - chr3_2:37788283-37788302 None:intergenic 25.0%
!! AAAGGGTAAGATTGTATTTT+TGG - chr3_2:37788501-37788520 None:intergenic 25.0%
!!! TTTTTAGGAGAGAAAAATAG+GGG - chr3_2:37788582-37788601 None:intergenic 25.0%
!!! TGTGAAAATTTGTTTTGATC+AGG - chr3_2:37788709-37788728 None:intergenic 25.0%
! TCATTAACATTCATAGAGAA+TGG - chr3_2:37789124-37789143 None:intergenic 25.0%
! TGATCAACAAAAACACAATT+TGG + chr3_2:37789614-37789633 Msa0404860:intron 25.0%
! TTGTTACAAAAGACACAAAT+TGG - chr3_2:37789676-37789695 None:intergenic 25.0%
! CCTAAAAAAGAAAAACTCAT+GGG - chr3_2:37790390-37790409 None:intergenic 25.0%
! TCCTAAAAAAGAAAAACTCA+TGG - chr3_2:37790391-37790410 None:intergenic 25.0%
! TAAAAAAGAAAAACTCAGGA+AGG - chr3_2:37790427-37790446 None:intergenic 25.0%
! TCTCCTTTGTAAATTATACA+TGG + chr3_2:37790773-37790792 Msa0404860:intron 25.0%
! CTCCTTTGTAAATTATACAT+GGG + chr3_2:37790774-37790793 Msa0404860:intron 25.0%
! ATCCCATGTATAATTTACAA+AGG - chr3_2:37790779-37790798 None:intergenic 25.0%
! GTTGTATAATACTTCATACA+CGG + chr3_2:37791047-37791066 Msa0404860:intron 25.0%
! TACGACATCTTTATCATTAA+CGG + chr3_2:37791077-37791096 Msa0404860:intron 25.0%
!! TGTTATTTAAGAAGACCTTA+AGG - chr3_2:37791191-37791210 None:intergenic 25.0%
!!! TTTTTTAGCAATTTACTTCG+TGG + chr3_2:37791318-37791337 Msa0404860:intron 25.0%
! CAAAGTGCAAAATGAAATTA+AGG - chr3_2:37791359-37791378 None:intergenic 25.0%
!!! TTTTGCAATTAAGTTGAATG+AGG - chr3_2:37791628-37791647 None:intergenic 25.0%
! ATGAATTTGGATAAAAAGAG+GGG + chr3_2:37791714-37791733 Msa0404860:intron 25.0%
! GTGTGTTTAAAAAACTAAAG+AGG + chr3_2:37791743-37791762 Msa0404860:intron 25.0%
!!! GTGTTTTAAGAAAATCTCAA+TGG + chr3_2:37791772-37791791 Msa0404860:intron 25.0%
!!! TTTTAAGAAAATCTCAATGG+AGG + chr3_2:37791775-37791794 Msa0404860:intron 25.0%
! TATTCCGTTAATGCATATAA+GGG - chr3_2:37791933-37791952 None:intergenic 25.0%
! TTATTCCGTTAATGCATATA+AGG - chr3_2:37791934-37791953 None:intergenic 25.0%
! TAGAGAAATCTAATGTGATA+TGG - chr3_2:37792054-37792073 None:intergenic 25.0%
! AATATGGGGCTAAATATTAA+AGG - chr3_2:37792182-37792201 None:intergenic 25.0%
!!! ATATTCAATTTTTTAAGGGG+AGG - chr3_2:37792299-37792318 None:intergenic 25.0%
! AATATGAACAACCTTTCAAT+TGG + chr3_2:37792343-37792362 Msa0404860:intron 25.0%
! ATCCTAATAAATGAAGAAAC+TGG - chr3_2:37792505-37792524 None:intergenic 25.0%
!! ATAATTGTTTCTTCATGCTT+AGG + chr3_2:37792538-37792557 Msa0404860:intron 25.0%
! TTAAGAATACAATTCGAGAA+GGG + chr3_2:37792568-37792587 Msa0404860:CDS 25.0%
! TACCAAAATAGTTATGAAGA+AGG + chr3_2:37792689-37792708 Msa0404860:CDS 25.0%
!! AACCTTCTTCATAACTATTT+TGG - chr3_2:37792694-37792713 None:intergenic 25.0%
! AATTGATACCATGTATATGA+GGG - chr3_2:37792809-37792828 None:intergenic 25.0%
! AAATTGATACCATGTATATG+AGG - chr3_2:37792810-37792829 None:intergenic 25.0%
!!! AACATTTTAAAGATCATACC+AGG - chr3_2:37792870-37792889 None:intergenic 25.0%
!!! TTTTGCTATAATGGATAACT+TGG + chr3_2:37793202-37793221 Msa0404860:three_prime_UTR 25.0%
!!! TTTATTTTGCTACAAATGAC+TGG - chr3_2:37793340-37793359 None:intergenic 25.0%
CTAAGTCTATCACATTTGAA+TGG - chr3_2:37787951-37787970 None:intergenic 30.0%
CATTCAAATGTGATAGACTT+AGG + chr3_2:37787949-37787968 Msa0404860:CDS 30.0%
TTCTCATATGCTATACAACT+TGG + chr3_2:37788030-37788049 Msa0404860:CDS 30.0%
TCGTATTTCTTGCAACAATT+TGG + chr3_2:37788164-37788183 Msa0404860:CDS 30.0%
TAAACACTTTAACACACCAT+GGG - chr3_2:37788232-37788251 None:intergenic 30.0%
ATTCAAGATGAACAAAAGCT+TGG + chr3_2:37788255-37788274 Msa0404860:CDS 30.0%
!!! TTTTTTGCTCCTAATTCTGA+TGG + chr3_2:37788318-37788337 Msa0404860:CDS 30.0%
AATGAAACACCATCAGAATT+AGG - chr3_2:37788330-37788349 None:intergenic 30.0%
! AATTCTGATGGTGTTTCATT+AGG + chr3_2:37788330-37788349 Msa0404860:CDS 30.0%
! GTATCAAGATAAGGTTTTCT+TGG + chr3_2:37788368-37788387 Msa0404860:intron 30.0%
CGTGTCAAAAAATGAAGAAA+GGG - chr3_2:37788518-37788537 None:intergenic 30.0%
ACGTGTCAAAAAATGAAGAA+AGG - chr3_2:37788519-37788538 None:intergenic 30.0%
GTTGAACCAAAAGACATAAA+AGG - chr3_2:37788556-37788575 None:intergenic 30.0%
! ATGGGACAAAATTGTGTTTT+CGG - chr3_2:37789195-37789214 None:intergenic 30.0%
!! AAAAAAGCATATTTTGCTCG+AGG + chr3_2:37789352-37789371 Msa0404860:intron 30.0%
AATGTCCAAAATACTGTCAA+CGG + chr3_2:37789820-37789839 Msa0404860:intron 30.0%
!!! TGGGAGAGCAATTTTTTAAT+TGG + chr3_2:37789931-37789950 Msa0404860:intron 30.0%
!!! GGGAGAGCAATTTTTTAATT+GGG + chr3_2:37789932-37789951 Msa0404860:intron 30.0%
ACTGAGTCTATTTGATGAAA+AGG + chr3_2:37790355-37790374 Msa0404860:intron 30.0%
AAAAAGAAAAACTCATGGGA+AGG - chr3_2:37790386-37790405 None:intergenic 30.0%
! CCCATGAGTTTTTCTTTTTT+AGG + chr3_2:37790387-37790406 Msa0404860:intron 30.0%
CTTAAAAAAGAAAAACGCGT+TGG - chr3_2:37790470-37790489 None:intergenic 30.0%
ATTTAAGAAGACCTTAAGGA+AGG - chr3_2:37791187-37791206 None:intergenic 30.0%
AAATTAAACCACCTTGATAG+TGG - chr3_2:37791416-37791435 None:intergenic 30.0%
! TATAGAAATGGGAAGGATTT+TGG - chr3_2:37791516-37791535 None:intergenic 30.0%
AAGAGAATATAGAAATGGGA+AGG - chr3_2:37791523-37791542 None:intergenic 30.0%
TGTCTGTGTTTGATTCTATT+TGG + chr3_2:37791560-37791579 Msa0404860:intron 30.0%
ATTCCGTTAATGCATATAAG+GGG - chr3_2:37791932-37791951 None:intergenic 30.0%
AAAGAACGAAAAGACAGATA+CGG + chr3_2:37791954-37791973 Msa0404860:intron 30.0%
GAAAACAATTAGCATTCAGA+GGG - chr3_2:37791985-37792004 None:intergenic 30.0%
AGAAAACAATTAGCATTCAG+AGG - chr3_2:37791986-37792005 None:intergenic 30.0%
!!! TTTTTTAAGGGAAGAGAGAA+GGG - chr3_2:37792133-37792152 None:intergenic 30.0%
!!! TTTTTTTAAGGGAAGAGAGA+AGG - chr3_2:37792134-37792153 None:intergenic 30.0%
TCTTCCCTTAAAAAAAAGTG+AGG + chr3_2:37792138-37792157 Msa0404860:intron 30.0%
CTTCCCTTAAAAAAAAGTGA+GGG + chr3_2:37792139-37792158 Msa0404860:intron 30.0%
!!! ACACCCTCACTTTTTTTTAA+GGG - chr3_2:37792145-37792164 None:intergenic 30.0%
!!! AACACCCTCACTTTTTTTTA+AGG - chr3_2:37792146-37792165 None:intergenic 30.0%
CAAAATTCATGTTGCAATGT+TGG - chr3_2:37792436-37792455 None:intergenic 30.0%
AGCCAGTTTCTTCATTTATT+AGG + chr3_2:37792500-37792519 Msa0404860:intron 30.0%
TCGAATTGTATTCTTAAGCT+CGG - chr3_2:37792565-37792584 None:intergenic 30.0%
CTTAAGAATACAATTCGAGA+AGG + chr3_2:37792567-37792586 Msa0404860:CDS 30.0%
TAAGAATACAATTCGAGAAG+GGG + chr3_2:37792569-37792588 Msa0404860:CDS 30.0%
ATGGTTTCAAGGACATAAAA+AGG + chr3_2:37792727-37792746 Msa0404860:CDS 30.0%
!! ATAAAAAGGCTTGTTGATGT+TGG + chr3_2:37792741-37792760 Msa0404860:CDS 30.0%
! CTATATCGACTGAAACTTTA+GGG + chr3_2:37792995-37793014 Msa0404860:intron 30.0%
! ATGTTTGAAAGTGTACCTAA+AGG + chr3_2:37793098-37793117 Msa0404860:CDS 30.0%
ATAAAGATTGCATCTCCTTT+AGG - chr3_2:37793116-37793135 None:intergenic 30.0%
TTTGATGTGTTGCAAAAAGC+CGG + chr3_2:37788105-37788124 Msa0404860:CDS 35.0%
AGAAAGTTGAGCATCTTTAC+CGG - chr3_2:37788127-37788146 None:intergenic 35.0%
! AGAATGCGATCCAACATTTT+GGG - chr3_2:37788195-37788214 None:intergenic 35.0%
! AAGAATGCGATCCAACATTT+TGG - chr3_2:37788196-37788215 None:intergenic 35.0%
GTAAACACTTTAACACACCA+TGG - chr3_2:37788233-37788252 None:intergenic 35.0%
ATAGTATGACTCCTATTGCT+AGG + chr3_2:37788295-37788314 Msa0404860:CDS 35.0%
TCTTGATACAAAGCCAACAA+GGG - chr3_2:37788357-37788376 None:intergenic 35.0%
ATCTTGATACAAAGCCAACA+AGG - chr3_2:37788358-37788377 None:intergenic 35.0%
!! GTTGGCTTTGTATCAAGATA+AGG + chr3_2:37788359-37788378 Msa0404860:intron 35.0%
GGTAGTCATTAAGTTTCATG+AGG - chr3_2:37788480-37788499 None:intergenic 35.0%
! TGTGTATTTTATTCGAGGAG+AGG + chr3_2:37789243-37789262 Msa0404860:intron 35.0%
! GTGTATTTTATTCGAGGAGA+GGG + chr3_2:37789244-37789263 Msa0404860:intron 35.0%
!!! TGGGTATTGAAGGTCATTTT+AGG + chr3_2:37789906-37789925 Msa0404860:intron 35.0%
!! ATTGAAGGTCATTTTAGGTG+TGG + chr3_2:37789911-37789930 Msa0404860:intron 35.0%
!! TTGAAGGTCATTTTAGGTGT+GGG + chr3_2:37789912-37789931 Msa0404860:intron 35.0%
AAAAAGAAAAACGCGTTGGA+AGG - chr3_2:37790466-37790485 None:intergenic 35.0%
GTCGATACTTAACAAAACAG+AGG + chr3_2:37790608-37790627 Msa0404860:intron 35.0%
AATTACACCAACCTTCCTTA+AGG + chr3_2:37791173-37791192 Msa0404860:intron 35.0%
! GTGCTTGTTGACTAATGAAA+AGG - chr3_2:37791481-37791500 None:intergenic 35.0%
CTGTGTTTGATTCTATTTGG+TGG + chr3_2:37791563-37791582 Msa0404860:intron 35.0%
GAGAATGGAATAAAACGTAG+AGG - chr3_2:37792111-37792130 None:intergenic 35.0%
! AACAACCTTTCAATTGGTCT+AGG + chr3_2:37792349-37792368 Msa0404860:intron 35.0%
TTGAAAAGGTCTCTATTGGA+AGG - chr3_2:37792473-37792492 None:intergenic 35.0%
GAGATTGAAAAGGTCTCTAT+TGG - chr3_2:37792477-37792496 None:intergenic 35.0%
AAGAATACAATTCGAGAAGG+GGG + chr3_2:37792570-37792589 Msa0404860:CDS 35.0%
TCATGGCTGTATTGAAAACT+TGG - chr3_2:37792662-37792681 None:intergenic 35.0%
TCAAAACACCCTCATATACA+TGG + chr3_2:37792798-37792817 Msa0404860:CDS 35.0%
GGTGTCAAATGATTAGATGT+TGG + chr3_2:37792969-37792988 Msa0404860:intron 35.0%
! GCTATATCGACTGAAACTTT+AGG + chr3_2:37792994-37793013 Msa0404860:intron 35.0%
AGGAGATGCAATCTTTATGA+AGG + chr3_2:37793118-37793137 Msa0404860:CDS 35.0%
GTGATAGACTTAGGTGTGAA+TGG + chr3_2:37787958-37787977 Msa0404860:CDS 40.0%
GACTTAGGTGTGAATGGAAA+TGG + chr3_2:37787964-37787983 Msa0404860:CDS 40.0%
CAGCTCTATTGTTCTTCCAA+TGG + chr3_2:37788053-37788072 Msa0404860:CDS 40.0%
TTTGGATGCTCCCAAAATGT+TGG + chr3_2:37788182-37788201 Msa0404860:CDS 40.0%
GGAGCAAAAAACCTAGCAAT+AGG - chr3_2:37788309-37788328 None:intergenic 40.0%
TGTTTCATTAGGACCCTTGT+TGG + chr3_2:37788341-37788360 Msa0404860:intron 40.0%
! ATAAGGTTTTCTTGGCTAGC+TGG + chr3_2:37788376-37788395 Msa0404860:intron 40.0%
TAGGAGAGAAAAATAGGGGA+TGG - chr3_2:37788578-37788597 None:intergenic 40.0%
! AACTGCCGTTGACAGTATTT+TGG - chr3_2:37789828-37789847 None:intergenic 40.0%
TCATTCATCTTAGGAGCGAA+CGG - chr3_2:37789856-37789875 None:intergenic 40.0%
CGCTCCTAAGATGAATGATA+AGG + chr3_2:37789858-37789877 Msa0404860:intron 40.0%
CGCTCCTTATCATTCATCTT+AGG - chr3_2:37789865-37789884 None:intergenic 40.0%
AAGAAGACCTTAAGGAAGGT+TGG - chr3_2:37791183-37791202 None:intergenic 40.0%
! AGAAATGGGAAGGATTTTGG+TGG - chr3_2:37791513-37791532 None:intergenic 40.0%
TGGTTCCTAGACCAATTGAA+AGG - chr3_2:37792357-37792376 None:intergenic 40.0%
ACTGGCTGTTGAGATTGAAA+AGG - chr3_2:37792487-37792506 None:intergenic 40.0%
TGCCATGAACCATGTTGAAT+GGG - chr3_2:37792599-37792618 None:intergenic 40.0%
TGCGTTTGATTATGCAAGCT+TGG + chr3_2:37792623-37792642 Msa0404860:CDS 40.0%
ATTATGCAAGCTTGGACTCA+AGG + chr3_2:37792631-37792650 Msa0404860:CDS 40.0%
AAGGTTCTTGAGAGCTACAA+TGG + chr3_2:37792708-37792727 Msa0404860:CDS 40.0%
TGAGAGCTACAATGGTTTCA+AGG + chr3_2:37792716-37792735 Msa0404860:CDS 40.0%
!! AAAAGGCTTGTTGATGTTGG+AGG + chr3_2:37792744-37792763 Msa0404860:CDS 40.0%
AGATCATACCAGGATACGAA+GGG - chr3_2:37792860-37792879 None:intergenic 40.0%
AAGATCATACCAGGATACGA+AGG - chr3_2:37792861-37792880 None:intergenic 40.0%
GTGTGAATGGAAATGGAGAG+AGG + chr3_2:37787971-37787990 Msa0404860:CDS 45.0%
CTCCATTCTGCAACTGAACT+TGG + chr3_2:37788078-37788097 Msa0404860:CDS 45.0%
CACCAAGTTCAGTTGCAGAA+TGG - chr3_2:37788083-37788102 None:intergenic 45.0%
! AGCATATTTTGCTCGAGGAG+AGG + chr3_2:37789357-37789376 Msa0404860:intron 45.0%
! GCATATTTTGCTCGAGGAGA+GGG + chr3_2:37789358-37789377 Msa0404860:intron 45.0%
ATGACCTTCAATACCCAGAG+CGG - chr3_2:37789903-37789922 None:intergenic 45.0%
CACTCACTGTTCCACTATCA+AGG + chr3_2:37791402-37791421 Msa0404860:intron 45.0%
TCACTGTTCCACTATCAAGG+TGG + chr3_2:37791405-37791424 Msa0404860:intron 45.0%
!! ATGGGAAGGATTTTGGTGGA+TGG - chr3_2:37791509-37791528 None:intergenic 45.0%
GGGCCCCTTATATGCATTAA+CGG + chr3_2:37791926-37791945 Msa0404860:intron 45.0%
GTCCCATTCAACATGGTTCA+TGG + chr3_2:37792594-37792613 Msa0404860:CDS 45.0%
GTGCCATGAACCATGTTGAA+TGG - chr3_2:37792600-37792619 None:intergenic 45.0%
TTGATGTTGGAGGTGGTCTT+GGG + chr3_2:37792754-37792773 Msa0404860:CDS 45.0%
GATCATACCAGGATACGAAG+GGG - chr3_2:37792859-37792878 None:intergenic 45.0%
TTGGTAGGAGTTGAACACGT+TGG + chr3_2:37793068-37793087 Msa0404860:intron 45.0%
GAGGGCTATTCTCAATGGAT+TGG - chr3_2:37793380-37793399 None:intergenic 45.0%
GGATTGAGGGCTATTCTCAA+TGG - chr3_2:37793385-37793404 None:intergenic 45.0%
!!! TTTGTTTTAATTTATTTTTT+AGG - chr3_2:37788597-37788616 None:intergenic 5.0%
!!! AAAAAATAATTTAATTTGTT+TGG - chr3_2:37790153-37790172 None:intergenic 5.0%
! GTTGCAGAATGGAGTGCCAT+TGG - chr3_2:37788072-37788091 None:intergenic 50.0%
CTTGCTCTTCTTGCATCCCA+TGG + chr3_2:37788213-37788232 Msa0404860:CDS 50.0%
ACGAAAGTTAACTGCCGCTC+TGG + chr3_2:37789886-37789905 Msa0404860:intron 50.0%
CGAAAGTTAACTGCCGCTCT+GGG + chr3_2:37789887-37789906 Msa0404860:intron 50.0%
AGGGAAGAGAGAAGGGAGAA+TGG - chr3_2:37792126-37792145 None:intergenic 50.0%
!! AGGCTTGTTGATGTTGGAGG+TGG + chr3_2:37792747-37792766 Msa0404860:CDS 50.0%
GTTGATGTTGGAGGTGGTCT+TGG + chr3_2:37792753-37792772 Msa0404860:CDS 50.0%
GGGGCATGTTGAATGACATG+AGG - chr3_2:37792840-37792859 None:intergenic 50.0%
GTAGGAGTTGAACACGTTGG+CGG + chr3_2:37793071-37793090 Msa0404860:intron 50.0%
!! ACTGCCGCTCTGGGTATTGA+AGG + chr3_2:37789896-37789915 Msa0404860:intron 55.0%
ATGCATAACCCCCGCTTCGA+TGG + chr3_2:37791881-37791900 Msa0404860:intron 55.0%
!! AGGGGGTGTCCCATTCAACA+TGG + chr3_2:37792587-37792606 Msa0404860:CDS 55.0%
CAACATGCCCCTTCGTATCC+TGG + chr3_2:37792849-37792868 Msa0404860:CDS 55.0%
AGGTTGGGCGTCCATCGAAG+CGG - chr3_2:37791895-37791914 None:intergenic 60.0%
TTGGGCGTCCATCGAAGCGG+GGG - chr3_2:37791892-37791911 None:intergenic 65.0%
GTTGGGCGTCCATCGAAGCG+GGG - chr3_2:37791893-37791912 None:intergenic 65.0%
GGTTGGGCGTCCATCGAAGC+GGG - chr3_2:37791894-37791913 None:intergenic 65.0%
CGCCCAACCTGTGCGCAGCA+CGG + chr3_2:37791905-37791924 Msa0404860:intron 70.0%
GCCCAACCTGTGCGCAGCAC+GGG + chr3_2:37791906-37791925 Msa0404860:intron 70.0%
GCCCGTGCTGCGCACAGGTT+GGG - chr3_2:37791910-37791929 None:intergenic 70.0%
GGCCCGTGCTGCGCACAGGT+TGG - chr3_2:37791911-37791930 None:intergenic 75.0%
AAGGGGCCCGTGCTGCGCAC+AGG - chr3_2:37791915-37791934 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 37787940 37793412 37787940 ID=Msa0404860;Name=Msa0404860
chr3_2 mRNA 37787940 37793412 37787940 ID=Msa0404860-mRNA-1;Parent=Msa0404860;Name=Msa0404860-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.5|0.66|1|1|1|3|219|282
chr3_2 exon 37787940 37788358 37787940 ID=Msa0404860-mRNA-1:exon:7554;Parent=Msa0404860-mRNA-1
chr3_2 exon 37792560 37792870 37792560 ID=Msa0404860-mRNA-1:exon:7555;Parent=Msa0404860-mRNA-1
chr3_2 exon 37793075 37793412 37793075 ID=Msa0404860-mRNA-1:exon:7556;Parent=Msa0404860-mRNA-1
chr3_2 CDS 37787940 37788358 37787940 ID=Msa0404860-mRNA-1:cds;Parent=Msa0404860-mRNA-1
chr3_2 CDS 37792560 37792870 37792560 ID=Msa0404860-mRNA-1:cds;Parent=Msa0404860-mRNA-1
chr3_2 CDS 37793075 37793193 37793075 ID=Msa0404860-mRNA-1:cds;Parent=Msa0404860-mRNA-1
chr3_2 three_prime_UTR 37793194 37793412 37793194 ID=Msa0404860-mRNA-1:three_prime_utr;Parent=Msa0404860-mRNA-1
Gene Sequence

>Msa0404860

ATGGCAAACCATTCAAATGTGATAGACTTAGGTGTGAATGGAAATGGAGAGAGGAGATCAGAAGAACAAGAATTAGAAGATGAAGAAAGTTTCTCATATGCTATACAACTTGGCAGCTCTATTGTTCTTCCAATGGCACTCCATTCTGCAACTGAACTTGGTGTATTTGATGTGTTGCAAAAAGCCGGTAAAGATGCTCAACTTTCTGCTGAAGAGATTGCATCTCGTATTTCTTGCAACAATTTGGATGCTCCCAAAATGTTGGATCGCATTCTTGCTCTTCTTGCATCCCATGGTGTGTTAAAGTGTTTACTCATTCAAGATGAACAAAAGCTTGGATCCTTTCATAGACTTTATAGTATGACTCCTATTGCTAGGTTTTTTGCTCCTAATTCTGATGGTGTTTCATTAGGACCCTTGTCCGAGCTTAAGAATACAATTCGAGAAGGGGGTGTCCCATTCAACATGGTTCATGGCACACATGCGTTTGATTATGCAAGCTTGGACTCAAGGTTCAACCAAGTTTTCAATACAGCCATGATCAATTATACCAAAATAGTTATGAAGAAGGTTCTTGAGAGCTACAATGGTTTCAAGGACATAAAAAGGCTTGTTGATGTTGGAGGTGGTCTTGGGATCAACATTAACTTGATCACTTCAAAACACCCTCATATACATGGTATCAATTTCGACTTGCCTCATGTCATTCAACATGCCCCTTCGTATCCTGGAGTTGAACACGTTGGCGGAGATATGTTTGAAAGTGTACCTAAAGGAGATGCAATCTTTATGAAGGTGAGTGAATATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTACATAGAATATGA

Protein sequence

>Msa0404860

MANHSNVIDLGVNGNGERRSEEQELEDEESFSYAIQLGSSIVLPMALHSATELGVFDVLQKAGKDAQLSAEEIASRISCNNLDAPKMLDRILALLASHGVLKCLLIQDEQKLGSFHRLYSMTPIARFFAPNSDGVSLGPLSELKNTIREGGVPFNMVHGTHAFDYASLDSRFNQVFNTAMINYTKIVMKKVLESYNGFKDIKRLVDVGGGLGININLITSKHPHIHGINFDLPHVIQHAPSYPGVEHVGGDMFESVPKGDAIFMKVSEYVFFFFFFFFLHRI*