Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863470 | XP_003617670.1 | 98.129 | 695 | 13 | 0 | 1 | 695 | 1 | 695 | 0.0 | 1407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863470 | sp|Q9FJ70|FIMB3_ARATH | 69.928 | 695 | 189 | 7 | 1 | 681 | 1 | 689 | 0.0 | 995 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863470 | G7K4B3 | 98.129 | 695 | 13 | 0 | 1 | 695 | 1 | 695 | 0.0 | 1407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0863470 | 0.804306 | 2.301852e-49 | -8.615850e-47 |
| Msa0056230 | Msa0863470 | 0.811651 | 6.293938e-51 | -8.615850e-47 |
| Msa0065190 | Msa0863470 | 0.806522 | 7.896395e-50 | -8.615850e-47 |
| Msa0606680 | Msa0863470 | 0.810532 | 1.099767e-50 | -8.615850e-47 |
| Msa0608940 | Msa0863470 | 0.804137 | 2.495808e-49 | -8.615850e-47 |
| Msa0624260 | Msa0863470 | 0.800946 | 1.135125e-48 | -8.615850e-47 |
| Msa0624360 | Msa0863470 | 0.803513 | 3.363394e-49 | -8.615850e-47 |
| Msa0636840 | Msa0863470 | 0.810862 | 9.331976e-51 | -8.615850e-47 |
| Msa0640780 | Msa0863470 | 0.807021 | 6.193888e-50 | -8.615850e-47 |
| Msa0685610 | Msa0863470 | -0.817122 | 3.884521e-52 | -8.615850e-47 |
| Msa0705130 | Msa0863470 | 0.813059 | 3.100432e-51 | -8.615850e-47 |
| Msa0708840 | Msa0863470 | 0.819103 | 1.384806e-52 | -8.615850e-47 |
| Msa0713530 | Msa0863470 | 0.800232 | 1.587279e-48 | -8.615850e-47 |
| Msa0729590 | Msa0863470 | 0.812205 | 4.766637e-51 | -8.615850e-47 |
| Msa0743280 | Msa0863470 | 0.975986 | 5.714388e-141 | -8.615850e-47 |
| Msa0754790 | Msa0863470 | 0.845780 | 3.280638e-59 | -8.615850e-47 |
| Msa0754840 | Msa0863470 | 0.836987 | 6.777656e-57 | -8.615850e-47 |
| Msa0755590 | Msa0863470 | 0.802585 | 5.233193e-49 | -8.615850e-47 |
| Msa0763350 | Msa0863470 | 0.817538 | 3.130276e-52 | -8.615850e-47 |
| Msa0766880 | Msa0863470 | 0.811083 | 8.357449e-51 | -8.615850e-47 |
| Msa0796610 | Msa0863470 | 0.816635 | 4.997017e-52 | -8.615850e-47 |
| Msa0797240 | Msa0863470 | 0.804478 | 2.119424e-49 | -8.615850e-47 |
| Msa0807840 | Msa0863470 | 0.811780 | 5.897841e-51 | -8.615850e-47 |
| Msa0833910 | Msa0863470 | 0.811988 | 5.315425e-51 | -8.615850e-47 |
| Msa0834160 | Msa0863470 | 0.808974 | 2.378958e-50 | -8.615850e-47 |
| Msa0834200 | Msa0863470 | 0.829267 | 5.664773e-55 | -8.615850e-47 |
| Msa0834240 | Msa0863470 | 0.802992 | 4.311639e-49 | -8.615850e-47 |
| Msa0156780 | Msa0863470 | 0.816314 | 5.895696e-52 | -8.615850e-47 |
| Msa0222720 | Msa0863470 | 0.802376 | 5.777520e-49 | -8.615850e-47 |
| Msa0228360 | Msa0863470 | 0.804819 | 1.798423e-49 | -8.615850e-47 |
| Msa0229750 | Msa0863470 | 0.829488 | 5.004388e-55 | -8.615850e-47 |
| Msa0230980 | Msa0863470 | 0.804143 | 2.488289e-49 | -8.615850e-47 |
| Msa0369580 | Msa0863470 | 0.832758 | 7.874099e-56 | -8.615850e-47 |
| Msa0377460 | Msa0863470 | 0.816608 | 5.065954e-52 | -8.615850e-47 |
| Msa0387740 | Msa0863470 | 0.825718 | 4.024189e-54 | -8.615850e-47 |
| Msa0388790 | Msa0863470 | 0.805738 | 1.154994e-49 | -8.615850e-47 |
| Msa0404860 | Msa0863470 | 0.801337 | 9.444315e-49 | -8.615850e-47 |
| Msa0417000 | Msa0863470 | 0.838554 | 2.684171e-57 | -8.615850e-47 |
| Msa0426860 | Msa0863470 | 0.828647 | 8.001893e-55 | -8.615850e-47 |
| Msa0426890 | Msa0863470 | 0.837160 | 6.123125e-57 | -8.615850e-47 |
| Msa0438680 | Msa0863470 | 0.804429 | 2.169507e-49 | -8.615850e-47 |
| Msa0455610 | Msa0863470 | 0.802782 | 4.764282e-49 | -8.615850e-47 |
| Msa0463820 | Msa0863470 | 0.808034 | 3.776921e-50 | -8.615850e-47 |
| Msa0473320 | Msa0863470 | 0.808809 | 2.580015e-50 | -8.615850e-47 |
| Msa0260930 | Msa0863470 | 0.817842 | 2.673895e-52 | -8.615850e-47 |
| Msa0261200 | Msa0863470 | 0.801930 | 7.136080e-49 | -8.615850e-47 |
| Msa0264020 | Msa0863470 | 0.813119 | 3.007417e-51 | -8.615850e-47 |
| Msa0302020 | Msa0863470 | 0.812250 | 4.660980e-51 | -8.615850e-47 |
| Msa0364010 | Msa0863470 | 0.824179 | 9.285105e-54 | -8.615850e-47 |
| Msa0483230 | Msa0863470 | 0.801449 | 8.956792e-49 | -8.615850e-47 |
| Msa0483410 | Msa0863470 | 0.810372 | 1.190864e-50 | -8.615850e-47 |
| Msa0517400 | Msa0863470 | 0.815462 | 9.132281e-52 | -8.615850e-47 |
| Msa0541880 | Msa0863470 | -0.805376 | 1.375600e-49 | -8.615850e-47 |
| Msa0541940 | Msa0863470 | -0.808592 | 2.871630e-50 | -8.615850e-47 |
| Msa0568490 | Msa0863470 | 0.801195 | 1.009812e-48 | -8.615850e-47 |
| Msa0577920 | Msa0863470 | 0.800746 | 1.246969e-48 | -8.615850e-47 |
| Msa0600280 | Msa0863470 | 0.802074 | 6.665145e-49 | -8.615850e-47 |
| Msa0848780 | Msa0863470 | 0.823879 | 1.092004e-53 | -8.615850e-47 |
| Msa0850520 | Msa0863470 | 0.806749 | 7.072184e-50 | -8.615850e-47 |
| Msa0863470 | Msa0866310 | 0.801688 | 7.999993e-49 | -8.615850e-47 |
| Msa0863470 | Msa0866510 | 0.845540 | 3.810296e-59 | -8.615850e-47 |
| Msa0863470 | Msa0880170 | 0.810774 | 9.749798e-51 | -8.615850e-47 |
| Msa0863470 | Msa0899080 | 0.805005 | 1.644393e-49 | -8.615850e-47 |
| Msa0863470 | Msa0927890 | 0.805719 | 1.165632e-49 | -8.615850e-47 |
| Msa0863470 | Msa0961200 | 0.813393 | 2.618315e-51 | -8.615850e-47 |
| Msa0863470 | Msa0967250 | 0.801808 | 7.558998e-49 | -8.615850e-47 |
| Msa0863470 | Msa0967260 | 0.805087 | 1.580983e-49 | -8.615850e-47 |
| Msa0863470 | Msa1033460 | 0.821094 | 4.846374e-53 | -8.615850e-47 |
| Msa0863470 | Msa1057320 | 0.821337 | 4.259685e-53 | -8.615850e-47 |
| Msa0863470 | Msa1071460 | 0.814814 | 1.271582e-51 | -8.615850e-47 |
| Msa0863470 | Msa1072640 | 0.800880 | 1.171225e-48 | -8.615850e-47 |
| Msa0863470 | Msa1073140 | 0.801507 | 8.715258e-49 | -8.615850e-47 |
| Msa0863470 | Msa1101610 | 0.815905 | 7.274425e-52 | -8.615850e-47 |
| Msa0863470 | Msa1113780 | 0.822909 | 1.840524e-53 | -8.615850e-47 |
| Msa0863470 | Msa1121580 | 0.821663 | 3.581551e-53 | -8.615850e-47 |
| Msa0863470 | Msa1124180 | 0.801110 | 1.050982e-48 | -8.615850e-47 |
| Msa0863470 | Msa1156270 | 0.800020 | 1.753036e-48 | -8.615850e-47 |
| Msa0863470 | Msa1160470 | 0.822108 | 2.825613e-53 | -8.615850e-47 |
| Msa0863470 | Msa1173410 | 0.832140 | 1.120555e-55 | -8.615850e-47 |
| Msa0863470 | Msa1175970 | 0.821629 | 3.646709e-53 | -8.615850e-47 |
| Msa0863470 | Msa1178980 | 0.802175 | 6.356345e-49 | -8.615850e-47 |
| Msa0863470 | Msa1179680 | 0.804219 | 2.399788e-49 | -8.615850e-47 |
| Msa0863470 | Msa1182530 | 0.818285 | 2.123086e-52 | -8.615850e-47 |
| Msa0863470 | Msa1182950 | 0.807954 | 3.927297e-50 | -8.615850e-47 |
| Msa0863470 | Msa1182960 | 0.828974 | 6.668970e-55 | -8.615850e-47 |
| Msa0863470 | Msa1199690 | 0.808777 | 2.621184e-50 | -8.615850e-47 |
| Msa0863470 | Msa1203860 | 0.806099 | 9.695857e-50 | -8.615850e-47 |
| Msa0863470 | Msa1215660 | 0.808835 | 2.548213e-50 | -8.615850e-47 |
| Msa0863470 | Msa1226330 | 0.802976 | 4.345369e-49 | -8.615850e-47 |
| Msa0863470 | Msa1257930 | 0.807226 | 5.604940e-50 | -8.615850e-47 |
| Msa0863470 | Msa1257960 | 0.808271 | 3.361178e-50 | -8.615850e-47 |
| Msa0863470 | Msa1267800 | 0.800658 | 1.299940e-48 | -8.615850e-47 |
| Msa0863470 | Msa1301410 | 0.812774 | 3.579249e-51 | -8.615850e-47 |
| Msa0863470 | Msa1329660 | 0.806066 | 9.850489e-50 | -8.615850e-47 |
| Msa0863470 | Msa1335130 | 0.805352 | 1.391593e-49 | -8.615850e-47 |
| Msa0863470 | Msa1336350 | 0.812380 | 4.365111e-51 | -8.615850e-47 |
| Msa0863470 | Msa1348330 | -0.803331 | 3.668956e-49 | -8.615850e-47 |
| Msa0863470 | Msa1364520 | 0.802273 | 6.067227e-49 | -8.615850e-47 |
| Msa0863470 | Msa1374210 | 0.803583 | 3.253381e-49 | -8.615850e-47 |
| Msa0863470 | Msa1381720 | 0.809078 | 2.260550e-50 | -8.615850e-47 |
| Msa0863470 | Msa1388070 | 0.812776 | 3.575164e-51 | -8.615850e-47 |
| Msa0863470 | Msa1393350 | 0.812299 | 4.545903e-51 | -8.615850e-47 |
| Msa0863470 | Msa1393600 | 0.823165 | 1.603936e-53 | -8.615850e-47 |
| Msa0863470 | Msa1448410 | 0.804799 | 1.815939e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863470 | MtrunA17_Chr5g0445111 | 98.129 | 695 | 13 | 0 | 1 | 695 | 1 | 695 | 0.0 | 1407 |
| Msa0863470 | MtrunA17_Chr5g0448051 | 69.559 | 680 | 192 | 2 | 1 | 680 | 1 | 665 | 0.0 | 978 |
| Msa0863470 | MtrunA17_Chr8g0338551 | 66.561 | 628 | 209 | 1 | 1 | 627 | 1 | 628 | 0.0 | 872 |
| Msa0863470 | MtrunA17_Chr7g0234481 | 67.891 | 626 | 198 | 2 | 1 | 623 | 1 | 626 | 0.0 | 865 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863470 | AT5G55400.1 | 69.928 | 695 | 189 | 7 | 1 | 681 | 1 | 689 | 0.0 | 995 |
| Msa0863470 | AT5G55400.2 | 69.928 | 695 | 189 | 7 | 1 | 681 | 1 | 689 | 0.0 | 995 |
| Msa0863470 | AT5G55400.3 | 69.928 | 695 | 189 | 7 | 1 | 681 | 1 | 689 | 0.0 | 995 |
| Msa0863470 | AT4G26700.4 | 71.053 | 684 | 194 | 4 | 1 | 682 | 1 | 682 | 0.0 | 993 |
| Msa0863470 | AT4G26700.2 | 71.053 | 684 | 194 | 4 | 1 | 682 | 1 | 682 | 0.0 | 993 |
| Msa0863470 | AT4G26700.1 | 71.053 | 684 | 194 | 4 | 1 | 682 | 1 | 682 | 0.0 | 993 |
| Msa0863470 | AT5G35700.1 | 67.057 | 683 | 207 | 3 | 1 | 682 | 1 | 666 | 0.0 | 946 |
| Msa0863470 | AT2G04750.1 | 64.749 | 678 | 210 | 3 | 1 | 676 | 1 | 651 | 0.0 | 902 |
| Msa0863470 | AT4G26700.5 | 73.298 | 573 | 151 | 2 | 1 | 572 | 1 | 572 | 0.0 | 879 |
| Msa0863470 | AT4G26700.6 | 73.298 | 573 | 151 | 2 | 1 | 572 | 1 | 572 | 0.0 | 879 |
| Msa0863470 | AT4G26700.3 | 73.298 | 573 | 151 | 2 | 1 | 572 | 1 | 572 | 0.0 | 879 |
| Msa0863470 | AT5G48460.1 | 65.204 | 638 | 220 | 2 | 1 | 636 | 1 | 638 | 0.0 | 862 |
| Msa0863470 | AT4G26700.7 | 73.888 | 517 | 132 | 3 | 167 | 682 | 19 | 533 | 0.0 | 789 |
Find 167 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTGGTCCTTTATGTTTC+TGG | 0.039840 | 5_4:-63220769 | Msa0863470:five_prime_UTR |
| GTCTCACATTCAGAGCTTTA+AGG | 0.159596 | 5_4:-63216120 | Msa0863470:intron |
| TTTCTAAATGGCATTCTAAT+TGG | 0.198379 | 5_4:+63216559 | None:intergenic |
| GTGATGCTGATATTCTTAAA+TGG | 0.216833 | 5_4:-63216175 | Msa0863470:CDS |
| TGTTTCCAGTTAACCGATTC+AGG | 0.221059 | 5_4:+63216595 | None:intergenic |
| TTAAAAGTATTTGCAGAAAA+AGG | 0.234805 | 5_4:+63220703 | None:intergenic |
| TATGGCTTATCACTTATTAT+TGG | 0.238365 | 5_4:+63214697 | None:intergenic |
| AAATGAGAGGCAAAAGATTA+AGG | 0.249591 | 5_4:-63214843 | Msa0863470:three_prime_UTR |
| CTCAAGCTATATATTCATTC+TGG | 0.249651 | 5_4:+63214987 | None:intergenic |
| CAAAACGAAATCTTTCTCTT+TGG | 0.257305 | 5_4:-63219036 | Msa0863470:CDS |
| ACATAAACTATGACAAATTA+TGG | 0.262343 | 5_4:+63214679 | None:intergenic |
| AAGTGTTTACCTTTATGATT+TGG | 0.264559 | 5_4:+63218788 | None:intergenic |
| GACACCTCAGCTTGTGGAAT+TGG | 0.275119 | 5_4:-63218570 | Msa0863470:CDS |
| GTCAAGTGGACTCTTCTTCC+TGG | 0.297646 | 5_4:-63215979 | Msa0863470:CDS |
| ATCCTCAGGTAACAAATATA+TGG | 0.304430 | 5_4:+63215460 | None:intergenic |
| AGAAATGAGAGAGATCAATA+AGG | 0.305310 | 5_4:-63214817 | Msa0863470:three_prime_UTR |
| GAAAGTTATTCATCCCTTAA+TGG | 0.306011 | 5_4:-63215162 | Msa0863470:CDS |
| AAAACGAAATCTTTCTCTTT+GGG | 0.307791 | 5_4:-63219035 | Msa0863470:CDS |
| TCCCCTGCCCCTTCCGTTTG+TGG | 0.309435 | 5_4:-63215192 | Msa0863470:CDS |
| CTTGAGTCAGTATCTTCCTT+TGG | 0.321034 | 5_4:-63219260 | Msa0863470:CDS |
| CACAAGATTTGCTCTTTCAT+TGG | 0.321474 | 5_4:+63217174 | None:intergenic |
| TCTTCACAACTTGAATTTGA+TGG | 0.329624 | 5_4:-63215090 | Msa0863470:CDS |
| CCGAATTGAGGCATAGAGTA+TGG | 0.333553 | 5_4:+63218999 | None:intergenic |
| CATTACATATGTGACATCTT+TGG | 0.337332 | 5_4:+63214943 | None:intergenic |
| CCTAAAACCACTTCTAGATT+TGG | 0.337607 | 5_4:-63220785 | Msa0863470:five_prime_UTR |
| GGAAATAAGAAGCTCATTCT+TGG | 0.337857 | 5_4:-63216451 | Msa0863470:intron |
| CGTTGTCTTCGGTCTGTTGT+TGG | 0.341261 | 5_4:+63215265 | None:intergenic |
| GGAAGGGGCAGGGGAAGCTT+CGG | 0.342813 | 5_4:+63215200 | None:intergenic |
| AGTGTTTACCTTTATGATTT+GGG | 0.344504 | 5_4:+63218789 | None:intergenic |
| CACTTTGACCCTTGGTAACT+AGG | 0.354139 | 5_4:+63215916 | None:intergenic |
| CTCAATTCGGCTAAGGCTAT+TGG | 0.354276 | 5_4:-63218986 | Msa0863470:CDS |
| GTACAGTGAAGATGAGATTA+GGG | 0.357196 | 5_4:-63220310 | Msa0863470:CDS |
| CATCACTTATCTCCTTTCCT+TGG | 0.359853 | 5_4:+63216192 | None:intergenic |
| GTAATTTCAGATCCAACTTC+TGG | 0.360902 | 5_4:-63218612 | Msa0863470:intron |
| TTTGTTACCTGAGGATATTA+TGG | 0.372370 | 5_4:-63215453 | Msa0863470:CDS |
| TGTACAGTGAAGATGAGATT+AGG | 0.373898 | 5_4:-63220311 | Msa0863470:CDS |
| CTATTTGATCTTTCAAAAGA+TGG | 0.374761 | 5_4:-63219220 | Msa0863470:CDS |
| CTTATCAATGTTGCTGTGCC+TGG | 0.375092 | 5_4:-63219085 | Msa0863470:CDS |
| GAAGGGGCAGGGGAAGCTTC+GGG | 0.377533 | 5_4:+63215201 | None:intergenic |
| ATCACTTATCTCCTTTCCTT+GGG | 0.393063 | 5_4:+63216193 | None:intergenic |
| TACAAATTCAGTAGTGGAAC+TGG | 0.394913 | 5_4:+63214735 | None:intergenic |
| GTTGATTTCCCAAATCATAA+AGG | 0.401124 | 5_4:-63218797 | Msa0863470:intron |
| GTGGCTGGACTGCAATGTTC+AGG | 0.408374 | 5_4:+63217214 | None:intergenic |
| CACGATTAGCGGATCAGAAA+AGG | 0.409153 | 5_4:-63219329 | Msa0863470:CDS |
| CATCTTAGTAGAACTTTGTC+AGG | 0.409635 | 5_4:+63218391 | None:intergenic |
| CTCCTTGTTTCGTTGTAGCT+TGG | 0.413139 | 5_4:+63219404 | None:intergenic |
| GAAATGAGAGAGATCAATAA+GGG | 0.415759 | 5_4:-63214816 | Msa0863470:three_prime_UTR |
| CAAGCTGAGGTGTCTTCTTA+AGG | 0.418489 | 5_4:+63218579 | None:intergenic |
| CAGAATGGTAAAGTTACATA+TGG | 0.418490 | 5_4:-63220378 | Msa0863470:CDS |
| AATGAGAGGCAAAAGATTAA+GGG | 0.418749 | 5_4:-63214842 | Msa0863470:three_prime_UTR |
| TACCAAGATGTCAAAATTTG+AGG | 0.425052 | 5_4:-63220601 | Msa0863470:exon |
| GAAGTTCAACCTGTGTAAAC+TGG | 0.425063 | 5_4:+63220547 | None:intergenic |
| AGAGAGAGAGATTTCTTGAT+GGG | 0.428517 | 5_4:+63221193 | None:intergenic |
| CTATTTGAGGATGTCAGAAA+TGG | 0.430841 | 5_4:-63216802 | Msa0863470:CDS |
| TTCAATGTACTTACCACAAA+CGG | 0.440067 | 5_4:-63221131 | Msa0863470:five_prime_UTR |
| GGGTGGTTATGCTTTCGTTA+AGG | 0.441687 | 5_4:+63219359 | None:intergenic |
| TGATGCTGATATTCTTAAAT+GGG | 0.441756 | 5_4:-63216174 | Msa0863470:CDS |
| AACTAATGCCAGAAACATAA+AGG | 0.442002 | 5_4:+63220761 | None:intergenic |
| TCGTGTAAATAATCTATTTG+AGG | 0.443027 | 5_4:-63216815 | Msa0863470:CDS |
| TAGAGCCAAGGGTTGTCAAT+TGG | 0.447407 | 5_4:-63215941 | Msa0863470:CDS |
| TTTAGCTTCATCATTAAAGA+TGG | 0.450321 | 5_4:+63220348 | None:intergenic |
| CTGACAAAGTTCTACTAAGA+TGG | 0.451061 | 5_4:-63218390 | Msa0863470:CDS |
| ACTTTCATCTTCACCACAAA+CGG | 0.455623 | 5_4:+63215179 | None:intergenic |
| CTAAATGGCATTCTAATTGG+AGG | 0.460061 | 5_4:+63216562 | None:intergenic |
| ATCAAAAGTATCTCTTCAAA+AGG | 0.463692 | 5_4:+63220673 | None:intergenic |
| GGAAGATACTGACTCAAGAA+TGG | 0.469267 | 5_4:+63219265 | None:intergenic |
| TCACCACAAACGGAAGGGGC+AGG | 0.469547 | 5_4:+63215189 | None:intergenic |
| ACCCTTCTTCACACGATTAG+CGG | 0.469956 | 5_4:-63219340 | Msa0863470:CDS |
| GAGACTCCAATACATTATAC+TGG | 0.471200 | 5_4:+63215287 | None:intergenic |
| AAATGCAAGATTAAGATTTG+AGG | 0.473328 | 5_4:+63217087 | None:intergenic |
| ACCACAAACGGAAGGGGCAG+GGG | 0.475123 | 5_4:+63215191 | None:intergenic |
| ATCCGCTAATCGTGTGAAGA+AGG | 0.478962 | 5_4:+63219338 | None:intergenic |
| TAACATTGGCGCACAAGACT+TGG | 0.479565 | 5_4:-63218951 | Msa0863470:CDS |
| AACAGAAAAGTGAATAGCAT+TGG | 0.480035 | 5_4:-63216149 | Msa0863470:CDS |
| ACATCTTTGGCATGTATAGC+TGG | 0.482103 | 5_4:+63214956 | None:intergenic |
| TCGCTCAATTATTTCATCAC+AGG | 0.484806 | 5_4:-63217063 | Msa0863470:intron |
| TGAATCGGTTAACTGGAAAC+AGG | 0.485665 | 5_4:-63216593 | Msa0863470:CDS |
| ATCAGTGTCGCACGAAAGCT+TGG | 0.486279 | 5_4:-63215488 | Msa0863470:CDS |
| TTGCAGCCAGTATAATGTAT+TGG | 0.489064 | 5_4:-63215293 | Msa0863470:CDS |
| AAACATACCACTTTGACCCT+TGG | 0.491256 | 5_4:+63215908 | None:intergenic |
| AGGGGAAGCTTCGGGTGTGT+TGG | 0.494209 | 5_4:+63215209 | None:intergenic |
| ATTGGCATCTTTAGTATCCA+AGG | 0.497711 | 5_4:+63217192 | None:intergenic |
| GGCTAAGATCTGCCAGAAGT+TGG | 0.498355 | 5_4:+63218600 | None:intergenic |
| CAGAAAGAATGGGCTGCAAA+AGG | 0.498410 | 5_4:-63217141 | Msa0863470:CDS |
| ACCAAGATGTCAAAATTTGA+GGG | 0.500673 | 5_4:-63220600 | Msa0863470:exon |
| GTGGTAAGTACATTGAATGA+AGG | 0.507743 | 5_4:+63221137 | None:intergenic |
| GTTTAAGACTCAACCGTTTG+TGG | 0.509657 | 5_4:+63221118 | None:intergenic |
| TCAAATAGATCATTTGTAGC+TGG | 0.510329 | 5_4:+63219235 | None:intergenic |
| TGCGACACTGATTATGTAAG+TGG | 0.514332 | 5_4:+63215499 | None:intergenic |
| GGTATCATCAACACTCAAGT+TGG | 0.515488 | 5_4:+63215131 | None:intergenic |
| CCATACTCTATGCCTCAATT+CGG | 0.515651 | 5_4:-63218999 | Msa0863470:CDS |
| GGCGCACAAGACTTGGTTGA+CGG | 0.518448 | 5_4:-63218944 | Msa0863470:CDS |
| CACCACAAACGGAAGGGGCA+GGG | 0.520815 | 5_4:+63215190 | None:intergenic |
| AAATTTATTGTTCTTTGTAG+AGG | 0.522495 | 5_4:-63214874 | Msa0863470:three_prime_UTR |
| TTCTCAGTGCAGTAGAGCCA+AGG | 0.523939 | 5_4:-63215953 | Msa0863470:CDS |
| GCTTGAGCATGCAGAAAGAA+TGG | 0.525075 | 5_4:-63217152 | Msa0863470:CDS |
| AGGAAATGAATCGTTGTCTT+CGG | 0.525710 | 5_4:+63215254 | None:intergenic |
| AGGTTCCAATTGACAACCCT+TGG | 0.526371 | 5_4:+63215936 | None:intergenic |
| TTCCATATATTTGTTACCTG+AGG | 0.531885 | 5_4:-63215462 | Msa0863470:CDS |
| GAAGATACTGACTCAAGAAT+GGG | 0.532220 | 5_4:+63219266 | None:intergenic |
| ATCTTTAATGATGAAGCTAA+AGG | 0.533344 | 5_4:-63220346 | Msa0863470:CDS |
| ATTAAGATTTGAGGTTCCCT+CGG | 0.539291 | 5_4:+63217096 | None:intergenic |
| TCTTTAGTATCCAAGGTGGC+TGG | 0.540347 | 5_4:+63217199 | None:intergenic |
| ACGATTAGCGGATCAGAAAA+GGG | 0.542026 | 5_4:-63219328 | Msa0863470:CDS |
| TATTTGAGGATGTCAGAAAT+GGG | 0.544161 | 5_4:-63216801 | Msa0863470:intron |
| AAGAGAGATGCTTTAGAATG+TGG | 0.544875 | 5_4:-63216861 | Msa0863470:CDS |
| AGAATGTGGATCAATAGTCT+TGG | 0.545573 | 5_4:-63216847 | Msa0863470:CDS |
| ATCTTCACCACAAACGGAAG+GGG | 0.546488 | 5_4:+63215185 | None:intergenic |
| TTATCAATGTTGCTGTGCCT+GGG | 0.546584 | 5_4:-63219084 | Msa0863470:CDS |
| GAGATCTCATTCCCAAGGAA+AGG | 0.547069 | 5_4:-63216204 | Msa0863470:CDS |
| TAAGAAGACACCTCAGCTTG+TGG | 0.548237 | 5_4:-63218576 | Msa0863470:CDS |
| GGATGCACAGTTGTTAACAT+TGG | 0.549678 | 5_4:-63218965 | Msa0863470:CDS |
| CAAAAGATGGCATTCTTCTG+TGG | 0.549711 | 5_4:-63219207 | Msa0863470:intron |
| CAATAGCCTTAGCCGAATTG+AGG | 0.553192 | 5_4:+63218987 | None:intergenic |
| AGAGAAAGAGATCCAAATGC+AGG | 0.553234 | 5_4:+63220649 | None:intergenic |
| GACTGCAATGTTCAGGAGCA+AGG | 0.557987 | 5_4:+63217221 | None:intergenic |
| GTGAGAGTGCTAGCAGGTGA+AGG | 0.567234 | 5_4:+63215234 | None:intergenic |
| AGAGAGATTTCTTGATGGGG+TGG | 0.567674 | 5_4:+63221197 | None:intergenic |
| TATACCTCCATAATATCCTC+AGG | 0.569641 | 5_4:+63215446 | None:intergenic |
| TCATCTTCACCACAAACGGA+AGG | 0.570006 | 5_4:+63215183 | None:intergenic |
| TCTCAGTGCAGTAGAGCCAA+GGG | 0.573854 | 5_4:-63215952 | Msa0863470:CDS |
| ACATTGCAGTCCAGCCACCT+TGG | 0.573939 | 5_4:-63217209 | Msa0863470:CDS |
| CTTGAGCATGCAGAAAGAAT+GGG | 0.573945 | 5_4:-63217151 | Msa0863470:CDS |
| CATCTTCACCACAAACGGAA+GGG | 0.574029 | 5_4:+63215184 | None:intergenic |
| GAGAGAGAGATTTCTTGATG+GGG | 0.574879 | 5_4:+63221194 | None:intergenic |
| GCTCGCTCGTCTATAGTCCC+AGG | 0.575614 | 5_4:+63219067 | None:intergenic |
| TGCAATCAAGTCATAAGAGT+CGG | 0.575866 | 5_4:-63216526 | Msa0863470:CDS |
| GCTCACATAAACAGCTACCT+TGG | 0.577283 | 5_4:-63219295 | Msa0863470:CDS |
| TTACCTAGAAAACAAAACAA+AGG | 0.581545 | 5_4:+63214584 | None:intergenic |
| GAATTTGATGGCGTTGCCGT+CGG | 0.586421 | 5_4:-63215078 | Msa0863470:CDS |
| AACCAAGCTACAACGAAACA+AGG | 0.586583 | 5_4:-63219406 | Msa0863470:CDS |
| TCTATGCCTCAATTCGGCTA+AGG | 0.592579 | 5_4:-63218993 | Msa0863470:CDS |
| ATCAACCCTAAAACAAGATG+AGG | 0.596760 | 5_4:+63218814 | None:intergenic |
| TCATTTGTAGCTGGATCCAA+AGG | 0.600205 | 5_4:+63219244 | None:intergenic |
| AGAGACTGTTGTATCAGAAG+TGG | 0.603731 | 5_4:+63215110 | None:intergenic |
| TCCGCTAATCGTGTGAAGAA+GGG | 0.603800 | 5_4:+63219339 | None:intergenic |
| GCTTTCGTTAAGGAATGATG+AGG | 0.604252 | 5_4:+63219369 | None:intergenic |
| GCTTCAAAGCCAGTTTACAC+AGG | 0.605203 | 5_4:-63220556 | Msa0863470:CDS |
| TATATATTTACAGGATGCAG+AGG | 0.606274 | 5_4:-63217266 | Msa0863470:intron |
| AATTTGAGATCTCATTCCCA+AGG | 0.610970 | 5_4:-63216209 | Msa0863470:CDS |
| GCAAAAGGTACTTGAGCACA+AGG | 0.612195 | 5_4:-63217126 | Msa0863470:CDS |
| TTGGTAGTGAGAGTGCTAGC+AGG | 0.614552 | 5_4:+63215228 | None:intergenic |
| CTACTGCACTGAGAAGCTCC+AGG | 0.616153 | 5_4:+63215961 | None:intergenic |
| GTTACCTGAGGATATTATGG+AGG | 0.617888 | 5_4:-63215450 | Msa0863470:intron |
| TAAAGGACCAAATCTAGAAG+TGG | 0.621404 | 5_4:+63220778 | None:intergenic |
| CAATTGGAACCTAGTTACCA+AGG | 0.625122 | 5_4:-63215925 | Msa0863470:CDS |
| TCTTTGGCATGTATAGCTGG+AGG | 0.626659 | 5_4:+63214959 | None:intergenic |
| ACATAATACAAATTCAGTAG+TGG | 0.628277 | 5_4:+63214729 | None:intergenic |
| TCAAAATAACTCATCACCGA+CGG | 0.632299 | 5_4:+63215062 | None:intergenic |
| AGAGGAATGTGCAAAATGAG+AGG | 0.633651 | 5_4:-63214856 | Msa0863470:three_prime_UTR |
| GGAATTGGTTGATGATAACC+AGG | 0.634053 | 5_4:-63218555 | Msa0863470:intron |
| CAGGATAAGAGCTTGTCAAG+TGG | 0.634181 | 5_4:-63215993 | Msa0863470:CDS |
| TCAACCAATTCCACAAGCTG+AGG | 0.641796 | 5_4:+63218566 | None:intergenic |
| CTAGTTACCAAGGGTCAAAG+TGG | 0.646174 | 5_4:-63215915 | Msa0863470:intron |
| GTGCTTTGTCAGGATAACGT+TGG | 0.648060 | 5_4:-63220829 | Msa0863470:intron |
| AAAACATTATCTCATGCATG+TGG | 0.658044 | 5_4:+63215018 | None:intergenic |
| GCTAATCGTGTGAAGAAGGG+TGG | 0.662528 | 5_4:+63219342 | None:intergenic |
| TCAAGAATGGGTCATCACCA+AGG | 0.671193 | 5_4:+63219278 | None:intergenic |
| AATTGGAACCTAGTTACCAA+GGG | 0.672164 | 5_4:-63215924 | Msa0863470:CDS |
| TACAGTGAAGATGAGATTAG+GGG | 0.672715 | 5_4:-63220309 | Msa0863470:CDS |
| AGCACAAGGGACATTACCGA+GGG | 0.673380 | 5_4:-63217112 | Msa0863470:CDS |
| GAGCACAAGGGACATTACCG+AGG | 0.674381 | 5_4:-63217113 | Msa0863470:CDS |
| ACAGTGAAGATGAGATTAGG+GGG | 0.681059 | 5_4:-63220308 | Msa0863470:CDS |
| GCTGGCAATGATATTGTGCA+AGG | 0.690463 | 5_4:-63216472 | Msa0863470:CDS |
| GGCATCTTTAGTATCCAAGG+TGG | 0.710629 | 5_4:+63217195 | None:intergenic |
| CAAAAGGTACTTGAGCACAA+GGG | 0.747889 | 5_4:-63217125 | Msa0863470:CDS |
| CAAGCTACAACGAAACAAGG+AGG | 0.764617 | 5_4:-63219403 | Msa0863470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GACATTATTTATTTTATTAA+TGG | - | chr5_4:63217131-63217150 | Msa0863470:CDS | 10.0% |
| !!! | TTTTTACTAATGAAAATATT+CGG | + | chr5_4:63217906-63217925 | None:intergenic | 10.0% |
| !!! | TTAACTATCTTATAATTTTT+TGG | - | chr5_4:63218387-63218406 | Msa0863470:CDS | 10.0% |
| !! | AAAATTCATTGATAAGAAAA+GGG | + | chr5_4:63214843-63214862 | None:intergenic | 15.0% |
| !! | AAAAATTCATTGATAAGAAA+AGG | + | chr5_4:63214844-63214863 | None:intergenic | 15.0% |
| !!! | AATGAATTTTTGTTCATTTT+TGG | - | chr5_4:63214853-63214872 | Msa0863470:three_prime_UTR | 15.0% |
| !! | TACGATAAAATATATGAAAT+TGG | + | chr5_4:63215373-63215392 | None:intergenic | 15.0% |
| !! | AATTCAAATAACTAAACTAA+AGG | + | chr5_4:63217099-63217118 | None:intergenic | 15.0% |
| !!! | TTTAGTTATTTGAATTTTCT+TGG | - | chr5_4:63217103-63217122 | Msa0863470:CDS | 15.0% |
| !!! | TTTAACAACATTTTATGATT+AGG | - | chr5_4:63217552-63217571 | Msa0863470:intron | 15.0% |
| !!! | AATAAAGGTAGATTTTTATT+AGG | - | chr5_4:63218082-63218101 | Msa0863470:intron | 15.0% |
| !! | AGTTCTTAAGTTATTTAATT+AGG | - | chr5_4:63218860-63218879 | Msa0863470:intron | 15.0% |
| !! | GTTCTTAAGTTATTTAATTA+GGG | - | chr5_4:63218861-63218880 | Msa0863470:intron | 15.0% |
| !!! | ATGGATTAATAATAGTTTAT+GGG | - | chr5_4:63220195-63220214 | Msa0863470:intron | 15.0% |
| !! | AAAGAAAAATACAACAATAT+GGG | + | chr5_4:63221067-63221086 | None:intergenic | 15.0% |
| !! | AAAAGAAAAATACAACAATA+TGG | + | chr5_4:63221068-63221087 | None:intergenic | 15.0% |
| !!! | TTTCTGATTTTTATGTATCT+CGG | - | chr5_4:63214745-63214764 | Msa0863470:three_prime_UTR | 20.0% |
| !!! | TTAAAAGTATTTGCAGAAAA+AGG | + | chr5_4:63215134-63215153 | None:intergenic | 20.0% |
| !!! | AAGAACTTACTTTTGATTTA+AGG | + | chr5_4:63215317-63215336 | None:intergenic | 20.0% |
| !!! | TTAATGGTAAGTAAGTTTTA+TGG | - | chr5_4:63215603-63215622 | Msa0863470:intron | 20.0% |
| !! | ATTACATGATACAAAAACTA+CGG | + | chr5_4:63215781-63215800 | None:intergenic | 20.0% |
| !!! | TTTTGTATCATGTAATACTT+AGG | - | chr5_4:63215785-63215804 | Msa0863470:intron | 20.0% |
| !! | TTTGTATCATGTAATACTTA+GGG | - | chr5_4:63215786-63215805 | Msa0863470:intron | 20.0% |
| !!! | TTTTAATTGTAGAATTCTCT+CGG | - | chr5_4:63215915-63215934 | Msa0863470:intron | 20.0% |
| !! | TTTCAAATGATTAGGAATTT+CGG | - | chr5_4:63215954-63215973 | Msa0863470:CDS | 20.0% |
| !! | CAAAAATATTAGAGAAAAGA+TGG | - | chr5_4:63216025-63216044 | Msa0863470:intron | 20.0% |
| !!! | AAAATTAAAACCTTTTGACT+TGG | + | chr5_4:63216180-63216199 | None:intergenic | 20.0% |
| !!! | TTAATTTTACACTTAGTCAA+TGG | - | chr5_4:63216192-63216211 | Msa0863470:CDS | 20.0% |
| !!! | TATTATTACATTTTTCATGC+AGG | - | chr5_4:63216388-63216407 | Msa0863470:intron | 20.0% |
| !! | AATGTCGACAAAATATTATA+GGG | + | chr5_4:63216945-63216964 | None:intergenic | 20.0% |
| !! | AAATGTCGACAAAATATTAT+AGG | + | chr5_4:63216946-63216965 | None:intergenic | 20.0% |
| !!! | TATTTTCATTAGTAAAAAGC+AGG | - | chr5_4:63217908-63217927 | Msa0863470:intron | 20.0% |
| !! | AAAAAGCAGGATATATAAAA+AGG | - | chr5_4:63217921-63217940 | Msa0863470:intron | 20.0% |
| !! | AAAAGCAGGATATATAAAAA+GGG | - | chr5_4:63217922-63217941 | Msa0863470:intron | 20.0% |
| !! | AATAACTTCTGCAATTATAT+TGG | + | chr5_4:63217977-63217996 | None:intergenic | 20.0% |
| !! | AATATAATTGCAGAAGTTAT+TGG | - | chr5_4:63217976-63217995 | Msa0863470:intron | 20.0% |
| !!! | TATTGTTCTAGTATATTTTG+AGG | - | chr5_4:63218053-63218072 | Msa0863470:intron | 20.0% |
| !!! | AGTTAAAAGAGTATAAAACA+TGG | + | chr5_4:63218373-63218392 | None:intergenic | 20.0% |
| !!! | GGTTTTTTGAAGAAAAAAAA+TGG | - | chr5_4:63219735-63219754 | Msa0863470:intron | 20.0% |
| !!! | ATTTATTAGTGACACTATTT+TGG | - | chr5_4:63219803-63219822 | Msa0863470:intron | 20.0% |
| !!! | GATGGATTAATAATAGTTTA+TGG | - | chr5_4:63220194-63220213 | Msa0863470:intron | 20.0% |
| !! | AAATTTATTGTTCTTTGTAG+AGG | - | chr5_4:63220960-63220979 | Msa0863470:intron | 20.0% |
| !!! | TGTATTTTTCTTTTTCATGT+TGG | - | chr5_4:63221074-63221093 | Msa0863470:intron | 20.0% |
| !! | ACATAAACTATGACAAATTA+TGG | + | chr5_4:63221158-63221177 | None:intergenic | 20.0% |
| ! | AAAAAGGAATAACAACAATG+TGG | + | chr5_4:63215118-63215137 | None:intergenic | 25.0% |
| !!! | ATCAAAAGTATCTCTTCAAA+AGG | + | chr5_4:63215164-63215183 | None:intergenic | 25.0% |
| !! | TCTCTATCTTTTTAATGCAT+TGG | - | chr5_4:63215205-63215224 | Msa0863470:CDS | 25.0% |
| ! | ATCTCTTTCAAAAATCAGAA+TGG | - | chr5_4:63215441-63215460 | Msa0863470:intron | 25.0% |
| !! | TTTAGCTTCATCATTAAAGA+TGG | + | chr5_4:63215489-63215508 | None:intergenic | 25.0% |
| ! | ATCTTTAATGATGAAGCTAA+AGG | - | chr5_4:63215488-63215507 | Msa0863470:CDS | 25.0% |
| !!! | TGATTTTGAAGCTTTCTTAA+TGG | - | chr5_4:63215587-63215606 | Msa0863470:intron | 25.0% |
| ! | ATAAACGATTGATCTTAGTT+CGG | - | chr5_4:63215725-63215744 | Msa0863470:intron | 25.0% |
| !!! | ACTTTGAAATGATTAGTGAA+CGG | - | chr5_4:63215999-63216018 | Msa0863470:intron | 25.0% |
| ! | TTTCTAACATTGTGACAATT+TGG | - | chr5_4:63216060-63216079 | Msa0863470:intron | 25.0% |
| ! | AAAAGAGTTTAATTGAGAGA+AGG | - | chr5_4:63216112-63216131 | Msa0863470:intron | 25.0% |
| !! | TACATACCATTCTTTTCAAT+GGG | + | chr5_4:63216297-63216316 | None:intergenic | 25.0% |
| ! | CTATTTGATCTTTCAAAAGA+TGG | - | chr5_4:63216614-63216633 | Msa0863470:CDS | 25.0% |
| !!! | ACTAGCCTTTAATATAATAC+CGG | - | chr5_4:63216695-63216714 | Msa0863470:intron | 25.0% |
| !! | AAGATTTCGTTTTGTATTGA+TGG | + | chr5_4:63216792-63216811 | None:intergenic | 25.0% |
| ! | AAAACGAAATCTTTCTCTTT+GGG | - | chr5_4:63216799-63216818 | Msa0863470:intron | 25.0% |
| ! | AGTGTTTACCTTTATGATTT+GGG | + | chr5_4:63217048-63217067 | None:intergenic | 25.0% |
| ! | AAGTGTTTACCTTTATGATT+TGG | + | chr5_4:63217049-63217068 | None:intergenic | 25.0% |
| !! | AAAAATTCTTGACTGTTTTC+TGG | + | chr5_4:63217499-63217518 | None:intergenic | 25.0% |
| !!! | GAATTTTTCTTCTGATTTGA+AGG | - | chr5_4:63217511-63217530 | Msa0863470:intron | 25.0% |
| ! | TTATGATTAGGATTGTTCTA+TGG | - | chr5_4:63217564-63217583 | Msa0863470:intron | 25.0% |
| ! | AATGAGGAAAAAGAAACAAA+GGG | + | chr5_4:63217856-63217875 | None:intergenic | 25.0% |
| ! | AAATGAGGAAAAAGAAACAA+AGG | + | chr5_4:63217857-63217876 | None:intergenic | 25.0% |
| ! | ATAATGAACAAAGTTCAAGT+TGG | + | chr5_4:63218033-63218052 | None:intergenic | 25.0% |
| !! | AAGGTAGATTTTTATTAGGT+TGG | - | chr5_4:63218086-63218105 | Msa0863470:intron | 25.0% |
| ! | AATGAATCATGTGAAAAAGA+AGG | - | chr5_4:63218111-63218130 | Msa0863470:intron | 25.0% |
| ! | ATGAATCATGTGAAAAAGAA+GGG | - | chr5_4:63218112-63218131 | Msa0863470:intron | 25.0% |
| !!! | AGTAAGAAAGAGTCATTTTT+TGG | - | chr5_4:63218180-63218199 | Msa0863470:intron | 25.0% |
| !! | ATCAACGTCTTTATTGATTA+TGG | - | chr5_4:63218542-63218561 | Msa0863470:intron | 25.0% |
| ! | TTATGGCGATATATATTTAC+AGG | - | chr5_4:63218559-63218578 | Msa0863470:CDS | 25.0% |
| ! | AAATGCAAGATTAAGATTTG+AGG | + | chr5_4:63218750-63218769 | None:intergenic | 25.0% |
| ! | ATATGCACGAGTAATAAAAT+TGG | + | chr5_4:63218816-63218835 | None:intergenic | 25.0% |
| ! | TCGTGTAAATAATCTATTTG+AGG | - | chr5_4:63219019-63219038 | Msa0863470:CDS | 25.0% |
| !!! | ATGTATTTTAAGAGAAGGAA+CGG | + | chr5_4:63219067-63219086 | None:intergenic | 25.0% |
| !!! | TGATGATGTATTTTAAGAGA+AGG | + | chr5_4:63219072-63219091 | None:intergenic | 25.0% |
| !! | CTTCATGTATATTTTCAACT+TGG | - | chr5_4:63219106-63219125 | Msa0863470:intron | 25.0% |
| !!! | TTTACTTTTTTTCGTGTAGA+TGG | - | chr5_4:63219186-63219205 | Msa0863470:intron | 25.0% |
| ! | TTTCTAAATGGCATTCTAAT+TGG | + | chr5_4:63219278-63219297 | None:intergenic | 25.0% |
| !!! | TCTATTTTTCAGCTTTATTG+TGG | - | chr5_4:63219566-63219585 | Msa0863470:intron | 25.0% |
| ! | TGATGCTGATATTCTTAAAT+GGG | - | chr5_4:63219660-63219679 | Msa0863470:intron | 25.0% |
| ! | TAAAAATTAGCCAAACTCAA+CGG | + | chr5_4:63219972-63219991 | None:intergenic | 25.0% |
| ! | AAAAGAGTGATAGTTATTGT+CGG | + | chr5_4:63220052-63220071 | None:intergenic | 25.0% |
| ! | CTATAATTTAGCGACTAAAT+TGG | + | chr5_4:63220076-63220095 | None:intergenic | 25.0% |
| !! | CTCTTAGTTCCTTTAAAAAT+AGG | + | chr5_4:63220166-63220185 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTGAACTTATGAC+AGG | - | chr5_4:63220494-63220513 | Msa0863470:intron | 25.0% |
| ! | ACATAATACAAATTCAGTAG+TGG | + | chr5_4:63221108-63221127 | None:intergenic | 25.0% |
| ! | TATGGCTTATCACTTATTAT+TGG | + | chr5_4:63221140-63221159 | None:intergenic | 25.0% |
| ! | TTACCTAGAAAACAAAACAA+AGG | + | chr5_4:63221253-63221272 | None:intergenic | 25.0% |
| TTCAATGTACTTACCACAAA+CGG | - | chr5_4:63214703-63214722 | Msa0863470:three_prime_UTR | 30.0% | |
| !! | TGTTCATTTTTGGATCATGA+TGG | - | chr5_4:63214863-63214882 | Msa0863470:three_prime_UTR | 30.0% |
| AACTAATGCCAGAAACATAA+AGG | + | chr5_4:63215076-63215095 | None:intergenic | 30.0% | |
| ! | ATACTTTTGATACCTGCATT+TGG | - | chr5_4:63215173-63215192 | Msa0863470:CDS | 30.0% |
| TACCAAGATGTCAAAATTTG+AGG | - | chr5_4:63215233-63215252 | Msa0863470:CDS | 30.0% | |
| ACCAAGATGTCAAAATTTGA+GGG | - | chr5_4:63215234-63215253 | Msa0863470:CDS | 30.0% | |
| TTTCTTCTTTCCTTATACGA+AGG | - | chr5_4:63215336-63215355 | Msa0863470:intron | 30.0% | |
| CAGAATGGTAAAGTTACATA+TGG | - | chr5_4:63215456-63215475 | Msa0863470:CDS | 30.0% | |
| ! | ATATCTGTTTAAGTTAGAGG+CGG | + | chr5_4:63215687-63215706 | None:intergenic | 30.0% |
| ! | TGCATATCTGTTTAAGTTAG+AGG | + | chr5_4:63215690-63215709 | None:intergenic | 30.0% |
| GAGATGATTTAACAGTTTCA+AGG | + | chr5_4:63215893-63215912 | None:intergenic | 30.0% | |
| !!! | GAGAAAAGATGGTTTTAGTA+TGG | - | chr5_4:63216036-63216055 | Msa0863470:intron | 30.0% |
| ! | CTCTCAATTAAACTCTTTTC+AGG | + | chr5_4:63216111-63216130 | None:intergenic | 30.0% |
| GTTTAATTGAGAGAAGGTAA+TGG | - | chr5_4:63216118-63216137 | Msa0863470:intron | 30.0% | |
| ATTACTCCCATTGAAAAGAA+TGG | - | chr5_4:63216288-63216307 | Msa0863470:intron | 30.0% | |
| ! | CTACATACCATTCTTTTCAA+TGG | + | chr5_4:63216298-63216317 | None:intergenic | 30.0% |
| AATGGTATGTAGCATTGTAA+TGG | - | chr5_4:63216306-63216325 | Msa0863470:intron | 30.0% | |
| TCAAATAGATCATTTGTAGC+TGG | + | chr5_4:63216602-63216621 | None:intergenic | 30.0% | |
| TTCTTCTGTGGTATATAAAC+AGG | - | chr5_4:63216639-63216658 | Msa0863470:intron | 30.0% | |
| TCTTCTGTGGTATATAAACA+GGG | - | chr5_4:63216640-63216659 | Msa0863470:intron | 30.0% | |
| ! | CTAGCCTTTAATATAATACC+GGG | - | chr5_4:63216696-63216715 | Msa0863470:intron | 30.0% |
| CAAACCCGGTATTATATTAA+AGG | + | chr5_4:63216703-63216722 | None:intergenic | 30.0% | |
| AACAAGACATAAATCAAACC+CGG | + | chr5_4:63216717-63216736 | None:intergenic | 30.0% | |
| CAAAACGAAATCTTTCTCTT+TGG | - | chr5_4:63216798-63216817 | Msa0863470:intron | 30.0% | |
| GTCTTTGTGACATTATTGTT+TGG | - | chr5_4:63216982-63217001 | Msa0863470:intron | 30.0% | |
| ! | GTTGATTTCCCAAATCATAA+AGG | - | chr5_4:63217037-63217056 | Msa0863470:intron | 30.0% |
| !!! | TCTTACTTTTTATTCGTCTC+AGG | - | chr5_4:63217394-63217413 | Msa0863470:intron | 30.0% |
| ! | GATGAATTTTCATCTCCAAA+GGG | - | chr5_4:63217466-63217485 | Msa0863470:intron | 30.0% |
| ! | ATGAATTTTCATCTCCAAAG+GGG | - | chr5_4:63217467-63217486 | Msa0863470:intron | 30.0% |
| ATAAAAAGGGTTGGAAAACT+CGG | - | chr5_4:63217935-63217954 | Msa0863470:intron | 30.0% | |
| !! | ATTTTGAGGATCGCAAATAA+AGG | - | chr5_4:63218067-63218086 | Msa0863470:intron | 30.0% |
| !!! | AAGAAAGAGTCATTTTTTGG+TGG | - | chr5_4:63218183-63218202 | Msa0863470:intron | 30.0% |
| ACACAACATTTATTCACCAT+AGG | + | chr5_4:63218303-63218322 | None:intergenic | 30.0% | |
| CTAACATGAAAAAGTTATGC+AGG | + | chr5_4:63218337-63218356 | None:intergenic | 30.0% | |
| GGTTCAATTTCAAACTATAG+AGG | + | chr5_4:63218510-63218529 | None:intergenic | 30.0% | |
| ! | GACGTTGATTGATAATATCT+AGG | + | chr5_4:63218531-63218550 | None:intergenic | 30.0% |
| TTATTACTCGTGCATATTTC+TGG | - | chr5_4:63218819-63218838 | Msa0863470:intron | 30.0% | |
| !! | TCTTTTTAGTATCTGTCGAT+AGG | + | chr5_4:63218908-63218927 | None:intergenic | 30.0% |
| TATTTGAGGATGTCAGAAAT+GGG | - | chr5_4:63219033-63219052 | Msa0863470:CDS | 30.0% | |
| !! | TGTATTTTAAGAGAAGGAAC+GGG | + | chr5_4:63219066-63219085 | None:intergenic | 30.0% |
| ! | AGACAAGATTTTTCCTGAAT+CGG | - | chr5_4:63219226-63219245 | Msa0863470:CDS | 30.0% |
| !! | CAGTTCTCTACTTTTCTAAA+TGG | + | chr5_4:63219290-63219309 | None:intergenic | 30.0% |
| TGAAGCTATAACATGAAGAA+TGG | + | chr5_4:63219413-63219432 | None:intergenic | 30.0% | |
| !!! | ACTAGCTGATTTTTTGGTTT+TGG | + | chr5_4:63219489-63219508 | None:intergenic | 30.0% |
| !!! | TGCAATACTAGCTGATTTTT+TGG | + | chr5_4:63219495-63219514 | None:intergenic | 30.0% |
| GTGATGCTGATATTCTTAAA+TGG | - | chr5_4:63219659-63219678 | Msa0863470:intron | 30.0% | |
| AACAGAAAAGTGAATAGCAT+TGG | - | chr5_4:63219685-63219704 | Msa0863470:intron | 30.0% | |
| ACTGTTATCGTGCATTTAAT+GGG | + | chr5_4:63219769-63219788 | None:intergenic | 30.0% | |
| TACTGTTATCGTGCATTTAA+TGG | + | chr5_4:63219770-63219789 | None:intergenic | 30.0% | |
| ! | GAAAAGTATAAGAAAGAGCA+TGG | + | chr5_4:63220009-63220028 | None:intergenic | 30.0% |
| !!! | ACTTCCTCTCCTATTTTTAA+AGG | - | chr5_4:63220154-63220173 | Msa0863470:intron | 30.0% |
| ! | AGTTCCTTTAAAAATAGGAG+AGG | + | chr5_4:63220161-63220180 | None:intergenic | 30.0% |
| GAACTAAGAGACTAATTTGA+TGG | - | chr5_4:63220176-63220195 | Msa0863470:intron | 30.0% | |
| ! | TTCCATATATTTGTTACCTG+AGG | - | chr5_4:63220372-63220391 | Msa0863470:CDS | 30.0% |
| ATCCTCAGGTAACAAATATA+TGG | + | chr5_4:63220377-63220396 | None:intergenic | 30.0% | |
| TTTGTTACCTGAGGATATTA+TGG | - | chr5_4:63220381-63220400 | Msa0863470:CDS | 30.0% | |
| GAAAGTTATTCATCCCTTAA+TGG | - | chr5_4:63220672-63220691 | Msa0863470:five_prime_UTR | 30.0% | |
| GTTGGAAAAATCACCATTAA+GGG | + | chr5_4:63220688-63220707 | None:intergenic | 30.0% | |
| AGTTGGAAAAATCACCATTA+AGG | + | chr5_4:63220689-63220708 | None:intergenic | 30.0% | |
| TCTTCACAACTTGAATTTGA+TGG | - | chr5_4:63220744-63220763 | Msa0863470:five_prime_UTR | 30.0% | |
| AAAACATTATCTCATGCATG+TGG | + | chr5_4:63220819-63220838 | None:intergenic | 30.0% | |
| CTCAAGCTATATATTCATTC+TGG | + | chr5_4:63220850-63220869 | None:intergenic | 30.0% | |
| CATTACATATGTGACATCTT+TGG | + | chr5_4:63220894-63220913 | None:intergenic | 30.0% | |
| AAATGAGAGGCAAAAGATTA+AGG | - | chr5_4:63220991-63221010 | Msa0863470:intron | 30.0% | |
| AATGAGAGGCAAAAGATTAA+GGG | - | chr5_4:63220992-63221011 | Msa0863470:intron | 30.0% | |
| AGAAATGAGAGAGATCAATA+AGG | - | chr5_4:63221017-63221036 | Msa0863470:intron | 30.0% | |
| GAAATGAGAGAGATCAATAA+GGG | - | chr5_4:63221018-63221037 | Msa0863470:intron | 30.0% | |
| !!! | AGTCCTTTGTTTTGTTTTCT+AGG | - | chr5_4:63221247-63221266 | Msa0863470:five_prime_UTR | 30.0% |
| AGAGAGAGAGATTTCTTGAT+GGG | + | chr5_4:63214644-63214663 | None:intergenic | 35.0% | |
| GTGGTAAGTACATTGAATGA+AGG | + | chr5_4:63214700-63214719 | None:intergenic | 35.0% | |
| ! | GTGTGATGCATTTGAAATCT+TGG | + | chr5_4:63214821-63214840 | None:intergenic | 35.0% |
| !! | GTTTTTGTTTGTGCTTTGTC+AGG | - | chr5_4:63214995-63215014 | Msa0863470:three_prime_UTR | 35.0% |
| ! | CCAAATCTAGAAGTGGTTTT+AGG | + | chr5_4:63215052-63215071 | None:intergenic | 35.0% |
| CCTAAAACCACTTCTAGATT+TGG | - | chr5_4:63215049-63215068 | Msa0863470:exon | 35.0% | |
| TAAAGGACCAAATCTAGAAG+TGG | + | chr5_4:63215059-63215078 | None:intergenic | 35.0% | |
| ! | GATTTGGTCCTTTATGTTTC+TGG | - | chr5_4:63215065-63215084 | Msa0863470:CDS | 35.0% |
| !! | ACCCTCAAATTTTGACATCT+TGG | + | chr5_4:63215238-63215257 | None:intergenic | 35.0% |
| CCAAAATTGTCCTTCGTATA+AGG | + | chr5_4:63215349-63215368 | None:intergenic | 35.0% | |
| ! | CCTTATACGAAGGACAATTT+TGG | - | chr5_4:63215346-63215365 | Msa0863470:intron | 35.0% |
| !!! | ACCTATGTTGCTTTTCTTTG+TGG | - | chr5_4:63215407-63215426 | Msa0863470:intron | 35.0% |
| ACCACAAAGAAAAGCAACAT+AGG | + | chr5_4:63215411-63215430 | None:intergenic | 35.0% | |
| !!! | TATGTTGCTTTTCTTTGTGG+TGG | - | chr5_4:63215410-63215429 | Msa0863470:intron | 35.0% |
| TGTACAGTGAAGATGAGATT+AGG | - | chr5_4:63215523-63215542 | Msa0863470:CDS | 35.0% | |
| GTACAGTGAAGATGAGATTA+GGG | - | chr5_4:63215524-63215543 | Msa0863470:intron | 35.0% | |
| TACAGTGAAGATGAGATTAG+GGG | - | chr5_4:63215525-63215544 | Msa0863470:intron | 35.0% | |
| ! | TATCTGTTTAAGTTAGAGGC+GGG | + | chr5_4:63215686-63215705 | None:intergenic | 35.0% |
| TTGTCAACAAAGTAGGATGT+GGG | - | chr5_4:63215865-63215884 | Msa0863470:intron | 35.0% | |
| TAATTGTAGAATTCTCTCGG+TGG | - | chr5_4:63215918-63215937 | Msa0863470:CDS | 35.0% | |
| AGCGAGACTTTCAAATGATT+AGG | - | chr5_4:63215946-63215965 | Msa0863470:CDS | 35.0% | |
| ! | TTCGGCAGCTTTTATATAGA+AGG | - | chr5_4:63215972-63215991 | Msa0863470:CDS | 35.0% |
| TTGAAATGATTAGTGAACGG+TGG | - | chr5_4:63216002-63216021 | Msa0863470:intron | 35.0% | |
| !!! | ACGAGACGGAAGTTTTATTT+TGG | - | chr5_4:63216141-63216160 | Msa0863470:CDS | 35.0% |
| ATTCTTAGAGCCAAGTCAAA+AGG | - | chr5_4:63216167-63216186 | Msa0863470:CDS | 35.0% | |
| !! | GAAGATACTGACTCAAGAAT+GGG | + | chr5_4:63216571-63216590 | None:intergenic | 35.0% |
| ATCAACCCTAAAACAAGATG+AGG | + | chr5_4:63217023-63217042 | None:intergenic | 35.0% | |
| ! | ATCTGAAATTACCAGTAGAG+TGG | + | chr5_4:63217214-63217233 | None:intergenic | 35.0% |
| GTAATTTCAGATCCAACTTC+TGG | - | chr5_4:63217222-63217241 | Msa0863470:CDS | 35.0% | |
| AAATTGCGTATCTCATTACC+TGG | + | chr5_4:63217300-63217319 | None:intergenic | 35.0% | |
| CATCTTAGTAGAACTTTGTC+AGG | + | chr5_4:63217446-63217465 | None:intergenic | 35.0% | |
| CTGACAAAGTTCTACTAAGA+TGG | - | chr5_4:63217444-63217463 | Msa0863470:intron | 35.0% | |
| ! | GGATGAATTTTCATCTCCAA+AGG | - | chr5_4:63217465-63217484 | Msa0863470:intron | 35.0% |
| AGGAAATAATTCCATGTGGA+GGG | + | chr5_4:63217683-63217702 | None:intergenic | 35.0% | |
| AAGGAAATAATTCCATGTGG+AGG | + | chr5_4:63217684-63217703 | None:intergenic | 35.0% | |
| TGGAAGGAAATAATTCCATG+TGG | + | chr5_4:63217687-63217706 | None:intergenic | 35.0% | |
| AAACAAAGGGAAACAATAGC+CGG | + | chr5_4:63217843-63217862 | None:intergenic | 35.0% | |
| AACAGATCATGATGCAAATG+AGG | + | chr5_4:63217872-63217891 | None:intergenic | 35.0% | |
| GCAGGATATATAAAAAGGGT+TGG | - | chr5_4:63217926-63217945 | Msa0863470:intron | 35.0% | |
| TAATTGCAGAAGTTATTGGC+AGG | - | chr5_4:63217980-63217999 | Msa0863470:intron | 35.0% | |
| AATTGCAGAAGTTATTGGCA+GGG | - | chr5_4:63217981-63218000 | Msa0863470:intron | 35.0% | |
| AGCAATTAGCTGAATTCAAC+TGG | - | chr5_4:63218157-63218176 | Msa0863470:intron | 35.0% | |
| TTCACCATAGGATTAGATAG+TGG | + | chr5_4:63218291-63218310 | None:intergenic | 35.0% | |
| ATTGGCATCTTTAGTATCCA+AGG | + | chr5_4:63218645-63218664 | None:intergenic | 35.0% | |
| ! | CACAAGATTTGCTCTTTCAT+TGG | + | chr5_4:63218663-63218682 | None:intergenic | 35.0% |
| ! | ATTAAGATTTGAGGTTCCCT+CGG | + | chr5_4:63218741-63218760 | None:intergenic | 35.0% |
| TCGCTCAATTATTTCATCAC+AGG | - | chr5_4:63218771-63218790 | Msa0863470:intron | 35.0% | |
| !! | AAGAGAGATGCTTTAGAATG+TGG | - | chr5_4:63218973-63218992 | Msa0863470:CDS | 35.0% |
| AGAATGTGGATCAATAGTCT+TGG | - | chr5_4:63218987-63219006 | Msa0863470:CDS | 35.0% | |
| CTATTTGAGGATGTCAGAAA+TGG | - | chr5_4:63219032-63219051 | Msa0863470:CDS | 35.0% | |
| ! | TTTTTCCTGAATCGGTTAAC+TGG | - | chr5_4:63219234-63219253 | Msa0863470:CDS | 35.0% |
| CTAAATGGCATTCTAATTGG+AGG | + | chr5_4:63219275-63219294 | None:intergenic | 35.0% | |
| TGCAATCAAGTCATAAGAGT+CGG | - | chr5_4:63219308-63219327 | Msa0863470:CDS | 35.0% | |
| ! | TTTTCACTAGTCAATGTAGC+TGG | - | chr5_4:63219344-63219363 | Msa0863470:CDS | 35.0% |
| GGAAATAAGAAGCTCATTCT+TGG | - | chr5_4:63219383-63219402 | Msa0863470:CDS | 35.0% | |
| ! | AATTTGAGATCTCATTCCCA+AGG | - | chr5_4:63219625-63219644 | Msa0863470:intron | 35.0% |
| ATCACTTATCTCCTTTCCTT+GGG | + | chr5_4:63219644-63219663 | None:intergenic | 35.0% | |
| CTGTTATCGTGCATTTAATG+GGG | + | chr5_4:63219768-63219787 | None:intergenic | 35.0% | |
| ! | TTGGATGCAATTTTGTGTAC+AGG | - | chr5_4:63219822-63219841 | Msa0863470:intron | 35.0% |
| AATTGGAACCTAGTTACCAA+GGG | - | chr5_4:63219910-63219929 | Msa0863470:intron | 35.0% | |
| TATACCTCCATAATATCCTC+AGG | + | chr5_4:63220391-63220410 | None:intergenic | 35.0% | |
| ATACGAATGAATCTCACTGA+TGG | + | chr5_4:63220421-63220440 | None:intergenic | 35.0% | |
| TTGCAGCCAGTATAATGTAT+TGG | - | chr5_4:63220541-63220560 | Msa0863470:CDS | 35.0% | |
| GAGACTCCAATACATTATAC+TGG | + | chr5_4:63220550-63220569 | None:intergenic | 35.0% | |
| AGGAAATGAATCGTTGTCTT+CGG | + | chr5_4:63220583-63220602 | None:intergenic | 35.0% | |
| ACTTTCATCTTCACCACAAA+CGG | + | chr5_4:63220658-63220677 | None:intergenic | 35.0% | |
| TCAAAATAACTCATCACCGA+CGG | + | chr5_4:63220775-63220794 | None:intergenic | 35.0% | |
| ! | TACAAATTCAGTAGTGGAAC+TGG | + | chr5_4:63221102-63221121 | None:intergenic | 35.0% |
| GAGAGAGAGATTTCTTGATG+GGG | + | chr5_4:63214643-63214662 | None:intergenic | 40.0% | |
| GAGAGAGAGAGATTTCTTGA+TGG | + | chr5_4:63214645-63214664 | None:intergenic | 40.0% | |
| ! | GTTTAAGACTCAACCGTTTG+TGG | + | chr5_4:63214719-63214738 | None:intergenic | 40.0% |
| AGAGAAAGAGATCCAAATGC+AGG | + | chr5_4:63215188-63215207 | None:intergenic | 40.0% | |
| GAAGTTCAACCTGTGTAAAC+TGG | + | chr5_4:63215290-63215309 | None:intergenic | 40.0% | |
| ACAGTGAAGATGAGATTAGG+GGG | - | chr5_4:63215526-63215545 | Msa0863470:intron | 40.0% | |
| AAATACTACATTCGAGCGTC+TGG | - | chr5_4:63215838-63215857 | Msa0863470:intron | 40.0% | |
| TGGTCACTTGTCAACAAAGT+AGG | - | chr5_4:63215858-63215877 | Msa0863470:intron | 40.0% | |
| CTTGTCAACAAAGTAGGATG+TGG | - | chr5_4:63215864-63215883 | Msa0863470:intron | 40.0% | |
| ! | CAATGGCTTTTGAATCCACT+TGG | - | chr5_4:63216209-63216228 | Msa0863470:CDS | 40.0% |
| ACTACACTCAAACAACCAAG+TGG | + | chr5_4:63216227-63216246 | None:intergenic | 40.0% | |
| AACCAAGCTACAACGAAACA+AGG | - | chr5_4:63216428-63216447 | Msa0863470:intron | 40.0% | |
| GCTTTCGTTAAGGAATGATG+AGG | + | chr5_4:63216468-63216487 | None:intergenic | 40.0% | |
| ! | ACGATTAGCGGATCAGAAAA+GGG | - | chr5_4:63216506-63216525 | Msa0863470:CDS | 40.0% |
| !! | GGAAGATACTGACTCAAGAA+TGG | + | chr5_4:63216572-63216591 | None:intergenic | 40.0% |
| CTTGAGTCAGTATCTTCCTT+TGG | - | chr5_4:63216574-63216593 | Msa0863470:CDS | 40.0% | |
| TCATTTGTAGCTGGATCCAA+AGG | + | chr5_4:63216593-63216612 | None:intergenic | 40.0% | |
| CAAAAGATGGCATTCTTCTG+TGG | - | chr5_4:63216627-63216646 | Msa0863470:CDS | 40.0% | |
| TTATCAATGTTGCTGTGCCT+GGG | - | chr5_4:63216750-63216769 | Msa0863470:intron | 40.0% | |
| CCATACTCTATGCCTCAATT+CGG | - | chr5_4:63216835-63216854 | Msa0863470:CDS | 40.0% | |
| GGATGCACAGTTGTTAACAT+TGG | - | chr5_4:63216869-63216888 | Msa0863470:CDS | 40.0% | |
| !!! | TTGCAGCCTCATCTTGTTTT+AGG | - | chr5_4:63217014-63217033 | Msa0863470:intron | 40.0% |
| !!! | TGCAGCCTCATCTTGTTTTA+GGG | - | chr5_4:63217015-63217034 | Msa0863470:intron | 40.0% |
| ! | CTCTTTTTCTTCCACTCTAC+TGG | - | chr5_4:63217200-63217219 | Msa0863470:CDS | 40.0% |
| !! | GGAATTGGTTGATGATAACC+AGG | - | chr5_4:63217279-63217298 | Msa0863470:intron | 40.0% |
| ! | AATTTTCATCTCCAAAGGGG+AGG | - | chr5_4:63217470-63217489 | Msa0863470:intron | 40.0% |
| ! | GTACAACTTTTGTTCACCGT+TGG | - | chr5_4:63217627-63217646 | Msa0863470:intron | 40.0% |
| TGGTGAGACAACTTAACCAA+CGG | + | chr5_4:63217646-63217665 | None:intergenic | 40.0% | |
| !! | GGAAGTGATTTTGGTATGGA+AGG | + | chr5_4:63217703-63217722 | None:intergenic | 40.0% |
| !! | GTTGGGAAGTGATTTTGGTA+TGG | + | chr5_4:63217707-63217726 | None:intergenic | 40.0% |
| GGTATGTTCCGAATCATGAT+CGG | - | chr5_4:63217742-63217761 | Msa0863470:intron | 40.0% | |
| !! | CAAAGTTCAAGTTGGACTCA+TGG | + | chr5_4:63218025-63218044 | None:intergenic | 40.0% |
| ATCATGTGAAAAAGAAGGGC+TGG | - | chr5_4:63218116-63218135 | Msa0863470:intron | 40.0% | |
| !!! | AGAGTCATTTTTTGGTGGAG+AGG | - | chr5_4:63218188-63218207 | Msa0863470:intron | 40.0% |
| TGGCTTGATTGAAAGACAGA+AGG | - | chr5_4:63218225-63218244 | Msa0863470:intron | 40.0% | |
| GGCTTGATTGAAAGACAGAA+GGG | - | chr5_4:63218226-63218245 | Msa0863470:intron | 40.0% | |
| AGGGAAATGATTCCATACAG+TGG | - | chr5_4:63218245-63218264 | Msa0863470:intron | 40.0% | |
| GGGAAATGATTCCATACAGT+GGG | - | chr5_4:63218246-63218265 | Msa0863470:intron | 40.0% | |
| CTTGAGCATGCAGAAAGAAT+GGG | - | chr5_4:63218683-63218702 | Msa0863470:intron | 40.0% | |
| !! | CAAAAGGTACTTGAGCACAA+GGG | - | chr5_4:63218709-63218728 | Msa0863470:intron | 40.0% |
| ! | TGGAATTTTCCTGCTACAGA+TGG | - | chr5_4:63219126-63219145 | Msa0863470:intron | 40.0% |
| ! | TGTTTCCAGTTAACCGATTC+AGG | + | chr5_4:63219242-63219261 | None:intergenic | 40.0% |
| TGAATCGGTTAACTGGAAAC+AGG | - | chr5_4:63219241-63219260 | Msa0863470:CDS | 40.0% | |
| CATCACTTATCTCCTTTCCT+TGG | + | chr5_4:63219645-63219664 | None:intergenic | 40.0% | |
| GTCTCACATTCAGAGCTTTA+AGG | - | chr5_4:63219714-63219733 | Msa0863470:intron | 40.0% | |
| CAATTGGAACCTAGTTACCA+AGG | - | chr5_4:63219909-63219928 | Msa0863470:intron | 40.0% | |
| AAACATACCACTTTGACCCT+TGG | + | chr5_4:63219929-63219948 | None:intergenic | 40.0% | |
| CGGCAACTATTGCATTTGTA+TGG | + | chr5_4:63219952-63219971 | None:intergenic | 40.0% | |
| TAGGAGAGGAAGTGATAGTT+CGG | + | chr5_4:63220147-63220166 | None:intergenic | 40.0% | |
| TAGTTCATGCGCTAAATCGA+AGG | - | chr5_4:63220236-63220255 | Msa0863470:intron | 40.0% | |
| ! | TGCGACACTGATTATGTAAG+TGG | + | chr5_4:63220338-63220357 | None:intergenic | 40.0% |
| GTTACCTGAGGATATTATGG+AGG | - | chr5_4:63220384-63220403 | Msa0863470:CDS | 40.0% | |
| GGTATCATCAACACTCAAGT+TGG | + | chr5_4:63220706-63220725 | None:intergenic | 40.0% | |
| AGAGACTGTTGTATCAGAAG+TGG | + | chr5_4:63220727-63220746 | None:intergenic | 40.0% | |
| ACATCTTTGGCATGTATAGC+TGG | + | chr5_4:63220881-63220900 | None:intergenic | 40.0% | |
| AGAGGAATGTGCAAAATGAG+AGG | - | chr5_4:63220978-63220997 | Msa0863470:intron | 40.0% | |
| AGAGAGATTTCTTGATGGGG+TGG | + | chr5_4:63214640-63214659 | None:intergenic | 45.0% | |
| GTGCTTTGTCAGGATAACGT+TGG | - | chr5_4:63215005-63215024 | Msa0863470:three_prime_UTR | 45.0% | |
| GCTTCAAAGCCAGTTTACAC+AGG | - | chr5_4:63215278-63215297 | Msa0863470:CDS | 45.0% | |
| !! | AGAGAAGGTAATGGACGAGA+CGG | - | chr5_4:63216127-63216146 | Msa0863470:CDS | 45.0% |
| GGTTGTTTGAGTGTAGTACG+TGG | - | chr5_4:63216230-63216249 | Msa0863470:CDS | 45.0% | |
| GAGTGTAGTACGTGGAAACT+CGG | - | chr5_4:63216238-63216257 | Msa0863470:CDS | 45.0% | |
| AGTACGTGGAAACTCGGATT+TGG | - | chr5_4:63216244-63216263 | Msa0863470:CDS | 45.0% | |
| ! | CTCCTTGTTTCGTTGTAGCT+TGG | + | chr5_4:63216433-63216452 | None:intergenic | 45.0% |
| CAAGCTACAACGAAACAAGG+AGG | - | chr5_4:63216431-63216450 | Msa0863470:intron | 45.0% | |
| GGGTGGTTATGCTTTCGTTA+AGG | + | chr5_4:63216478-63216497 | None:intergenic | 45.0% | |
| ACCCTTCTTCACACGATTAG+CGG | - | chr5_4:63216494-63216513 | Msa0863470:CDS | 45.0% | |
| TCCGCTAATCGTGTGAAGAA+GGG | + | chr5_4:63216498-63216517 | None:intergenic | 45.0% | |
| ATCCGCTAATCGTGTGAAGA+AGG | + | chr5_4:63216499-63216518 | None:intergenic | 45.0% | |
| ! | CACGATTAGCGGATCAGAAA+AGG | - | chr5_4:63216505-63216524 | Msa0863470:CDS | 45.0% |
| GCTCACATAAACAGCTACCT+TGG | - | chr5_4:63216539-63216558 | Msa0863470:CDS | 45.0% | |
| TCAAGAATGGGTCATCACCA+AGG | + | chr5_4:63216559-63216578 | None:intergenic | 45.0% | |
| CTTATCAATGTTGCTGTGCC+TGG | - | chr5_4:63216749-63216768 | Msa0863470:intron | 45.0% | |
| CCGAATTGAGGCATAGAGTA+TGG | + | chr5_4:63216838-63216857 | None:intergenic | 45.0% | |
| TCTATGCCTCAATTCGGCTA+AGG | - | chr5_4:63216841-63216860 | Msa0863470:CDS | 45.0% | |
| ! | CAATAGCCTTAGCCGAATTG+AGG | + | chr5_4:63216850-63216869 | None:intergenic | 45.0% |
| CTCAATTCGGCTAAGGCTAT+TGG | - | chr5_4:63216848-63216867 | Msa0863470:CDS | 45.0% | |
| TAACATTGGCGCACAAGACT+TGG | - | chr5_4:63216883-63216902 | Msa0863470:CDS | 45.0% | |
| ! | CAAGCTGAGGTGTCTTCTTA+AGG | + | chr5_4:63217258-63217277 | None:intergenic | 45.0% |
| TAAGAAGACACCTCAGCTTG+TGG | - | chr5_4:63217258-63217277 | Msa0863470:intron | 45.0% | |
| TCAACCAATTCCACAAGCTG+AGG | + | chr5_4:63217271-63217290 | None:intergenic | 45.0% | |
| !! | TTTTCTGGTAACCTCCCCTT+TGG | + | chr5_4:63217484-63217503 | None:intergenic | 45.0% |
| ! | AAGGGGTTGGGAAGTGATTT+TGG | + | chr5_4:63217712-63217731 | None:intergenic | 45.0% |
| AACATACCGAGTGTTCGGAA+GGG | + | chr5_4:63217730-63217749 | None:intergenic | 45.0% | |
| TTCGGAACATACCGAGTGTT+CGG | + | chr5_4:63217735-63217754 | None:intergenic | 45.0% | |
| ! | GATGATGGCCGATCATGATT+CGG | + | chr5_4:63217753-63217772 | None:intergenic | 45.0% |
| GCACATGAAGTCTCTCATTC+CGG | - | chr5_4:63217821-63217840 | Msa0863470:intron | 45.0% | |
| AAAGGGTTGGAAAACTCGGA+AGG | - | chr5_4:63217939-63217958 | Msa0863470:intron | 45.0% | |
| AAGGGTTGGAAAACTCGGAA+GGG | - | chr5_4:63217940-63217959 | Msa0863470:intron | 45.0% | |
| !!! | GTCATTTTTTGGTGGAGAGG+CGG | - | chr5_4:63218191-63218210 | Msa0863470:intron | 45.0% |
| ! | TTGATGGTACACCCACTGTA+TGG | + | chr5_4:63218260-63218279 | None:intergenic | 45.0% |
| AGTGGGTGTACCATCAAATG+TGG | - | chr5_4:63218263-63218282 | Msa0863470:intron | 45.0% | |
| ! | GATAGTGGCACCACATTTGA+TGG | + | chr5_4:63218276-63218295 | None:intergenic | 45.0% |
| !! | GGTGCCACTATCTAATCCTA+TGG | - | chr5_4:63218284-63218303 | Msa0863470:intron | 45.0% |
| TCTTTAGTATCCAAGGTGGC+TGG | + | chr5_4:63218638-63218657 | None:intergenic | 45.0% | |
| GGCATCTTTAGTATCCAAGG+TGG | + | chr5_4:63218642-63218661 | None:intergenic | 45.0% | |
| GCTTGAGCATGCAGAAAGAA+TGG | - | chr5_4:63218682-63218701 | Msa0863470:intron | 45.0% | |
| !! | CAGAAAGAATGGGCTGCAAA+AGG | - | chr5_4:63218693-63218712 | Msa0863470:intron | 45.0% |
| !! | GCAAAAGGTACTTGAGCACA+AGG | - | chr5_4:63218708-63218727 | Msa0863470:intron | 45.0% |
| ATTAGGGCCTTAAGCAATGC+AGG | - | chr5_4:63218877-63218896 | Msa0863470:intron | 45.0% | |
| AACTTGCATCCATCTGTAGC+AGG | + | chr5_4:63219138-63219157 | None:intergenic | 45.0% | |
| GCTGGCAATGATATTGTGCA+AGG | - | chr5_4:63219362-63219381 | Msa0863470:CDS | 45.0% | |
| GTATTGCATTGTGTGTGTCG+TGG | - | chr5_4:63219507-63219526 | Msa0863470:intron | 45.0% | |
| GAGATCTCATTCCCAAGGAA+AGG | - | chr5_4:63219630-63219649 | Msa0863470:intron | 45.0% | |
| CAGGATAAGAGCTTGTCAAG+TGG | - | chr5_4:63219841-63219860 | Msa0863470:intron | 45.0% | |
| TAGAGCCAAGGGTTGTCAAT+TGG | - | chr5_4:63219893-63219912 | Msa0863470:intron | 45.0% | |
| AGGTTCCAATTGACAACCCT+TGG | + | chr5_4:63219901-63219920 | None:intergenic | 45.0% | |
| ! | CACTTTGACCCTTGGTAACT+AGG | + | chr5_4:63219921-63219940 | None:intergenic | 45.0% |
| CTAGTTACCAAGGGTCAAAG+TGG | - | chr5_4:63219919-63219938 | Msa0863470:intron | 45.0% | |
| GCAATAGTTGCCGTTGAGTT+TGG | - | chr5_4:63219959-63219978 | Msa0863470:intron | 45.0% | |
| CGAATGAATCTCACTGATGG+TGG | + | chr5_4:63220418-63220437 | None:intergenic | 45.0% | |
| ATCTTCACCACAAACGGAAG+GGG | + | chr5_4:63220652-63220671 | None:intergenic | 45.0% | |
| CATCTTCACCACAAACGGAA+GGG | + | chr5_4:63220653-63220672 | None:intergenic | 45.0% | |
| TCATCTTCACCACAAACGGA+AGG | + | chr5_4:63220654-63220673 | None:intergenic | 45.0% | |
| TCTTTGGCATGTATAGCTGG+AGG | + | chr5_4:63220878-63220897 | None:intergenic | 45.0% | |
| !! | AAATGTAATAATAAATTAAA+AGG | + | chr5_4:63216381-63216400 | None:intergenic | 5.0% |
| !!! | ACATTATTTATTTTATTAAT+GGG | - | chr5_4:63217132-63217151 | Msa0863470:CDS | 5.0% |
| GCTAATCGTGTGAAGAAGGG+TGG | + | chr5_4:63216495-63216514 | None:intergenic | 50.0% | |
| GGCTAAGATCTGCCAGAAGT+TGG | + | chr5_4:63217237-63217256 | None:intergenic | 50.0% | |
| GACACCTCAGCTTGTGGAAT+TGG | - | chr5_4:63217264-63217283 | Msa0863470:intron | 50.0% | |
| ! | GGAGGGTGTAGCATCGAATA+TGG | + | chr5_4:63217666-63217685 | None:intergenic | 50.0% |
| ACATACCGAGTGTTCGGAAG+GGG | + | chr5_4:63217729-63217748 | None:intergenic | 50.0% | |
| GAACATACCGAGTGTTCGGA+AGG | + | chr5_4:63217731-63217750 | None:intergenic | 50.0% | |
| TTGGTTGTTTGCAGCACGCA+AGG | - | chr5_4:63217791-63217810 | Msa0863470:intron | 50.0% | |
| !!! | ATTTTTTGGTGGAGAGGCGG+AGG | - | chr5_4:63218194-63218213 | Msa0863470:intron | 50.0% |
| !!! | TTTTTTGGTGGAGAGGCGGA+GGG | - | chr5_4:63218195-63218214 | Msa0863470:intron | 50.0% |
| GACTGCAATGTTCAGGAGCA+AGG | + | chr5_4:63218616-63218635 | None:intergenic | 50.0% | |
| AGCACAAGGGACATTACCGA+GGG | - | chr5_4:63218722-63218741 | Msa0863470:intron | 50.0% | |
| ! | GTCAAGTGGACTCTTCTTCC+TGG | - | chr5_4:63219855-63219874 | Msa0863470:intron | 50.0% |
| TTCTCAGTGCAGTAGAGCCA+AGG | - | chr5_4:63219881-63219900 | Msa0863470:intron | 50.0% | |
| TCTCAGTGCAGTAGAGCCAA+GGG | - | chr5_4:63219882-63219901 | Msa0863470:intron | 50.0% | |
| ATCAGTGTCGCACGAAAGCT+TGG | - | chr5_4:63220346-63220365 | Msa0863470:CDS | 50.0% | |
| CGTTGTCTTCGGTCTGTTGT+TGG | + | chr5_4:63220572-63220591 | None:intergenic | 50.0% | |
| !! | TTGGTAGTGAGAGTGCTAGC+AGG | + | chr5_4:63220609-63220628 | None:intergenic | 50.0% |
| !! | GAATTTGATGGCGTTGCCGT+CGG | - | chr5_4:63220756-63220775 | Msa0863470:five_prime_UTR | 50.0% |
| ! | GGCGCACAAGACTTGGTTGA+CGG | - | chr5_4:63216890-63216909 | Msa0863470:CDS | 55.0% |
| TCGATGCTACACCCTCCACA+TGG | - | chr5_4:63217669-63217688 | Msa0863470:intron | 55.0% | |
| TTGCCACTGTCGCAGGATGA+TGG | + | chr5_4:63217768-63217787 | None:intergenic | 55.0% | |
| TCATCCTGCGACAGTGGCAA+CGG | - | chr5_4:63217768-63217787 | Msa0863470:intron | 55.0% | |
| CAGCTAATTGCTGCTCTCGC+AGG | + | chr5_4:63218149-63218168 | None:intergenic | 55.0% | |
| GTGGCTGGACTGCAATGTTC+AGG | + | chr5_4:63218623-63218642 | None:intergenic | 55.0% | |
| ACATTGCAGTCCAGCCACCT+TGG | - | chr5_4:63218625-63218644 | Msa0863470:intron | 55.0% | |
| GAGCACAAGGGACATTACCG+AGG | - | chr5_4:63218721-63218740 | Msa0863470:intron | 55.0% | |
| GGCCTTAAGCAATGCAGGAG+TGG | - | chr5_4:63218882-63218901 | Msa0863470:intron | 55.0% | |
| GGCCACTCCTGCATTGCTTA+AGG | + | chr5_4:63218887-63218906 | None:intergenic | 55.0% | |
| GTGTGTCGTGGAGACGAACT+TGG | - | chr5_4:63219519-63219538 | Msa0863470:intron | 55.0% | |
| CTACTGCACTGAGAAGCTCC+AGG | + | chr5_4:63219876-63219895 | None:intergenic | 55.0% | |
| !! | GTGAGAGTGCTAGCAGGTGA+AGG | + | chr5_4:63220603-63220622 | None:intergenic | 55.0% |
| GCTCGCTCGTCTATAGTCCC+AGG | + | chr5_4:63216770-63216789 | None:intergenic | 60.0% | |
| CCGAGTGTTCGGAAGGGGTT+GGG | + | chr5_4:63217724-63217743 | None:intergenic | 60.0% | |
| CCCAACCCCTTCCGAACACT+CGG | - | chr5_4:63217721-63217740 | Msa0863470:intron | 60.0% | |
| ACCGAGTGTTCGGAAGGGGT+TGG | + | chr5_4:63217725-63217744 | None:intergenic | 60.0% | |
| GAGAGGCGGAGGGTAGTGAA+TGG | - | chr5_4:63218205-63218224 | Msa0863470:intron | 60.0% | |
| AGGGGAAGCTTCGGGTGTGT+TGG | + | chr5_4:63220628-63220647 | None:intergenic | 60.0% | |
| ACCACAAACGGAAGGGGCAG+GGG | + | chr5_4:63220646-63220665 | None:intergenic | 60.0% | |
| CACCACAAACGGAAGGGGCA+GGG | + | chr5_4:63220647-63220666 | None:intergenic | 60.0% | |
| TCACCACAAACGGAAGGGGC+AGG | + | chr5_4:63220648-63220667 | None:intergenic | 60.0% | |
| CGGCCATCATCCTGCGACAG+TGG | - | chr5_4:63217762-63217781 | Msa0863470:intron | 65.0% | |
| CCAACCGTTGCCACTGTCGC+AGG | + | chr5_4:63217775-63217794 | None:intergenic | 65.0% | |
| CCTGCGACAGTGGCAACGGT+TGG | - | chr5_4:63217772-63217791 | Msa0863470:intron | 65.0% | |
| GAAGGGGCAGGGGAAGCTTC+GGG | + | chr5_4:63220636-63220655 | None:intergenic | 65.0% | |
| GGAAGGGGCAGGGGAAGCTT+CGG | + | chr5_4:63220637-63220656 | None:intergenic | 65.0% | |
| TCCCCTGCCCCTTCCGTTTG+TGG | - | chr5_4:63220642-63220661 | Msa0863470:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 63214584 | 63221272 | 63214584 | ID=Msa0863470;Name=Msa0863470 |
| chr5_4 | mRNA | 63214584 | 63221272 | 63214584 | ID=Msa0863470-mRNA-1;Parent=Msa0863470;Name=Msa0863470-mRNA-1;_AED=0.12;_eAED=0.12;_QI=386|1|1|1|0.86|0.81|16|478|695 |
| chr5_4 | exon | 63214584 | 63215340 | 63214584 | ID=Msa0863470-mRNA-1:exon:19937;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63215451 | 63215542 | 63215451 | ID=Msa0863470-mRNA-1:exon:19936;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63215916 | 63216012 | 63215916 | ID=Msa0863470-mRNA-1:exon:19935;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63216121 | 63216278 | 63216121 | ID=Msa0863470-mRNA-1:exon:19934;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63216452 | 63216651 | 63216452 | ID=Msa0863470-mRNA-1:exon:19933;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63216802 | 63216957 | 63216802 | ID=Msa0863470-mRNA-1:exon:19932;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63217064 | 63217275 | 63217064 | ID=Msa0863470-mRNA-1:exon:19931;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63218324 | 63218440 | 63218324 | ID=Msa0863470-mRNA-1:exon:19930;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63218556 | 63218624 | 63218556 | ID=Msa0863470-mRNA-1:exon:19929;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63218798 | 63218836 | 63218798 | ID=Msa0863470-mRNA-1:exon:19928;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63218940 | 63219111 | 63218940 | ID=Msa0863470-mRNA-1:exon:19927;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63219208 | 63219446 | 63219208 | ID=Msa0863470-mRNA-1:exon:19926;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63220248 | 63220418 | 63220248 | ID=Msa0863470-mRNA-1:exon:19925;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63220530 | 63220839 | 63220530 | ID=Msa0863470-mRNA-1:exon:19924;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63221090 | 63221182 | 63221090 | ID=Msa0863470-mRNA-1:exon:19923;Parent=Msa0863470-mRNA-1 |
| chr5_4 | exon | 63221203 | 63221272 | 63221203 | ID=Msa0863470-mRNA-1:exon:19922;Parent=Msa0863470-mRNA-1 |
| chr5_4 | five_prime_UTR | 63221203 | 63221272 | 63221203 | ID=Msa0863470-mRNA-1:five_prime_utr;Parent=Msa0863470-mRNA-1 |
| chr5_4 | five_prime_UTR | 63221090 | 63221182 | 63221090 | ID=Msa0863470-mRNA-1:five_prime_utr;Parent=Msa0863470-mRNA-1 |
| chr5_4 | five_prime_UTR | 63220617 | 63220839 | 63220617 | ID=Msa0863470-mRNA-1:five_prime_utr;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63220530 | 63220616 | 63220530 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63220248 | 63220418 | 63220248 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63219208 | 63219446 | 63219208 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63218940 | 63219111 | 63218940 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63218798 | 63218836 | 63218798 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63218556 | 63218624 | 63218556 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63218324 | 63218440 | 63218324 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63217064 | 63217275 | 63217064 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63216802 | 63216957 | 63216802 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63216452 | 63216651 | 63216452 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63216121 | 63216278 | 63216121 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63215916 | 63216012 | 63215916 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63215451 | 63215542 | 63215451 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | CDS | 63215062 | 63215340 | 63215062 | ID=Msa0863470-mRNA-1:cds;Parent=Msa0863470-mRNA-1 |
| chr5_4 | three_prime_UTR | 63214584 | 63215061 | 63214584 | ID=Msa0863470-mRNA-1:three_prime_utr;Parent=Msa0863470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
