AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1374210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1374210 MtrunA17_Chr4g0000041 97.639 593 6 4 1 589 1 589 0.0 1171
Msa1374210 MtrunA17_Chr8g0379501 51.351 74 35 1 478 551 81 153 7.03e-14 70.9
Msa1374210 MtrunA17_Chr8g0379511 28.028 289 170 13 156 417 126 403 2.37e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1374210 AT1G16720.1 83.034 501 85 0 89 589 98 598 0.0 872
Msa1374210 AT1G16720.2 77.903 534 85 1 89 589 98 631 0.0 855
Msa1374210 AT1G16720.3 82.289 463 82 0 89 551 98 560 0.0 798
Msa1374210 AT4G18810.1 29.694 458 255 23 140 551 113 549 2.41e-25 110
Msa1374210 AT4G18810.2 29.694 458 255 23 140 551 113 549 3.15e-25 110

Find 177 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACAACACTTTCACTTTC+AGG 0.166841 tig0019471:-13141 Msa1374210:CDS
TAATCTATCTAAAGCATTTC+AGG 0.177804 tig0019471:-12114 Msa1374210:CDS
ATTCTCAGTGAACTCAAATT+TGG 0.188350 tig0019471:+11929 None:intergenic
CGTGCTTCCACGTACTAAAT+AGG 0.210340 tig0019471:+13435 None:intergenic
TTTGTCTTAGTTTCATGTTC+TGG 0.244048 tig0019471:-9440 Msa1374210:CDS
TTGGACATTACCTGTCTTCT+AGG 0.270556 tig0019471:+11260 None:intergenic
TGTTGTCGTCGTCGTCGTTT+TGG 0.272039 tig0019471:+12986 None:intergenic
CTATCACTGGTGATCTCTTC+AGG 0.274699 tig0019471:-12157 Msa1374210:CDS
GAGAAGCTTTCAGCTAATAT+TGG 0.279017 tig0019471:-10464 Msa1374210:CDS
ATTCTAGAAGCTGGTCCTTC+AGG 0.280246 tig0019471:-11577 Msa1374210:CDS
GCCTTGGTATTGAGCCTTCC+AGG 0.286621 tig0019471:-9418 Msa1374210:CDS
ACAGCAGCCTTGACTGTGTT+TGG 0.292381 tig0019471:+12224 None:intergenic
TGTCAACTTCAAATCTGAAT+TGG 0.300935 tig0019471:+13333 None:intergenic
ACCGGACGAAATGATGAAAA+TGG 0.315241 tig0019471:+11344 None:intergenic
AGATATTACAGGGGACTAAT+TGG 0.315769 tig0019471:-7208 Msa1374210:three_prime_UTR
TCTTTGCCATCCCTGGTGTT+TGG 0.318685 tig0019471:+13024 None:intergenic
AAAGAAAATGTAGATATTAC+AGG 0.331116 tig0019471:-7219 Msa1374210:three_prime_UTR
AACCCCTGAGCATGAGTTTA+CGG 0.337945 tig0019471:+12698 None:intergenic
TTAGTTTCATGTTCTGGCCT+TGG 0.337954 tig0019471:-9434 Msa1374210:CDS
GAAGATTCCTTGAGAAGATC+TGG 0.343993 tig0019471:-9254 Msa1374210:CDS
CTTGCTGTCTTTGCCATCCC+TGG 0.353209 tig0019471:+13017 None:intergenic
TCTCCAGGCCAGGGATGTTC+AGG 0.370394 tig0019471:+8013 None:intergenic
TGCAAGAATTAGTACAAAAG+TGG 0.371055 tig0019471:-11527 Msa1374210:CDS
GTTCTCTCTGTTGGCGGCAA+TGG 0.376433 tig0019471:-11616 Msa1374210:CDS
AGTTCGTCCGGGTCCATTGC+AGG 0.386123 tig0019471:-9216 Msa1374210:intron
GTTAATGTATGTACAAGAAA+AGG 0.389677 tig0019471:+11296 None:intergenic
AAATTTGAGTTCACTGAGAA+TGG 0.390202 tig0019471:-11927 Msa1374210:CDS
TAATCAGGTTGCCCACTTGC+CGG 0.392057 tig0019471:-8087 Msa1374210:intron
ACAAGAAAAGGGTCTAAAAC+TGG 0.404655 tig0019471:+11308 None:intergenic
GGACAACAATTCGACCTATA+CGG 0.404869 tig0019471:+12719 None:intergenic
TTCTAGAAGCTGGTCCTTCA+GGG 0.411008 tig0019471:-11576 Msa1374210:CDS
GGGTCTAAAACTGGATGATC+TGG 0.417511 tig0019471:+11317 None:intergenic
TCATGATAGGTATGAGGGCT+TGG 0.424833 tig0019471:-11638 Msa1374210:intron
AATACTACTGTACTTGTTGT+TGG 0.426072 tig0019471:-12751 Msa1374210:CDS
CTGAATCTTCACTGGATGGA+TGG 0.426462 tig0019471:-12016 Msa1374210:CDS
TTGGAGAAAATTCTCTGGAC+TGG 0.426876 tig0019471:-12875 Msa1374210:CDS
CTGGACTGGGTCAGATCTCT+AGG 0.427807 tig0019471:-12861 Msa1374210:CDS
GACTGACAACTGACAGGAAT+CGG 0.427951 tig0019471:+13355 None:intergenic
GTTGGTGCTACTAGCCGTAT+AGG 0.435219 tig0019471:-12733 Msa1374210:CDS
TGTTTCTTGCAGTTGAATCA+TGG 0.435790 tig0019471:+8322 None:intergenic
GAGTGCCTTCACACATATAT+CGG 0.436679 tig0019471:+8344 None:intergenic
TGGATACACAATAGTTCGTC+CGG 0.437257 tig0019471:-9228 Msa1374210:CDS
AGATAGTTATTTGCTTTGTC+CGG 0.438211 tig0019471:+8068 None:intergenic
ATTTAAATCTGAATCTTCAC+TGG 0.438895 tig0019471:-12024 Msa1374210:CDS
TTAGGGTATGTCTTCAATAG+AGG 0.440898 tig0019471:-11793 Msa1374210:intron
TTGTCCGTAAACTCATGCTC+AGG 0.442258 tig0019471:-12702 Msa1374210:CDS
GGCAGATATTCGATGAGGTT+TGG 0.442586 tig0019471:-12894 Msa1374210:CDS
TCAGGATCACAACAATCAAT+TGG 0.444558 tig0019471:-12096 Msa1374210:CDS
GTGCTTCCACGTACTAAATA+GGG 0.444643 tig0019471:+13436 None:intergenic
GCTGAAAGCTTCTCGAATCC+TGG 0.446728 tig0019471:+10473 None:intergenic
GAGATAGTGATTGGGGATGT+TGG 0.447831 tig0019471:-12251 Msa1374210:CDS
AACAAATGAACCTACCCTCT+TGG 0.448430 tig0019471:+9376 None:intergenic
AATTGGCTCAGTTGCGCGCT+GGG 0.448540 tig0019471:-12079 Msa1374210:CDS
GTGTTTGGAGCAGCGGCTAT+AGG 0.454033 tig0019471:+13039 None:intergenic
ACAGTCAAGGCTGCTGTAGA+AGG 0.459186 tig0019471:-12218 Msa1374210:CDS
GAGGTTTGGAGAAAATTCTC+TGG 0.460565 tig0019471:-12880 Msa1374210:CDS
TCCTTGAGAAGATCTGGGCT+TGG 0.460859 tig0019471:-9248 Msa1374210:CDS
ATGTGTGAGTTTGCCATCCC+TGG 0.462288 tig0019471:-12781 Msa1374210:CDS
AGGTCAGTAGAGATAGTGAT+TGG 0.469344 tig0019471:-12260 Msa1374210:CDS
TTGTACATACATTAACAATA+CGG 0.470364 tig0019471:-11289 Msa1374210:CDS
TTGTAGGAGGTATGTTCTCC+AGG 0.472948 tig0019471:+7998 None:intergenic
AAATACAATTTACTCTGACT+TGG 0.474303 tig0019471:+11550 None:intergenic
GGAGGTATGTTCTCCAGGCC+AGG 0.475726 tig0019471:+8003 None:intergenic
TTTAAGAACTTGCTCCCGCC+TGG 0.479129 tig0019471:+9400 None:intergenic
CATCTGTCATGATAGGTATG+AGG 0.480362 tig0019471:-11644 Msa1374210:intron
GACGTCAACCCTGTGGGACT+TGG 0.481549 tig0019471:-12928 Msa1374210:CDS
GACACCAGCTCTCTCTGTCT+TGG 0.482972 tig0019471:-8045 Msa1374210:CDS
ACATGAAACTAAGACAAAAT+CGG 0.484449 tig0019471:+9445 None:intergenic
TATGTATTAATTCTAGAAGC+TGG 0.484676 tig0019471:-11586 Msa1374210:CDS
ATTAGAGCACGCTGCCCACC+AGG 0.489698 tig0019471:+8610 None:intergenic
TGGAGAAAATTCTCTGGACT+GGG 0.490104 tig0019471:-12874 Msa1374210:CDS
CAATTGGCTCAGTTGCGCGC+TGG 0.490703 tig0019471:-12080 Msa1374210:CDS
ATCCCTGGTGTTTGGAGCAG+CGG 0.491895 tig0019471:+13032 None:intergenic
TACGAGTACGTTGCTGAGGA+TGG 0.493701 tig0019471:-8205 Msa1374210:CDS
GAGGGCTTGGTTCTCTCTGT+TGG 0.494157 tig0019471:-11625 Msa1374210:CDS
ATACCTGAACATCCCTGGCC+TGG 0.496705 tig0019471:-8016 Msa1374210:exon
TGAATCTTCACTGGATGGAT+GGG 0.497784 tig0019471:-12015 Msa1374210:CDS
GGTCAGTAGAGATAGTGATT+GGG 0.500030 tig0019471:-12259 Msa1374210:CDS
GCAAGAATTAGTACAAAAGT+GGG 0.501200 tig0019471:-11526 Msa1374210:CDS
TTAATGTATGTACAAGAAAA+GGG 0.503140 tig0019471:+11297 None:intergenic
GATCGCTCGCAATTGCCAAT+TGG 0.504803 tig0019471:+13302 None:intergenic
TGGTATTGAGCCTTCCAGGC+GGG 0.505603 tig0019471:-9414 Msa1374210:CDS
ATCACCAGTGATAGTTGAGC+GGG 0.506989 tig0019471:+12166 None:intergenic
TAGCCGCTGCTCCAAACACC+AGG 0.507877 tig0019471:-13035 Msa1374210:CDS
CGCTCGCAATTGCCAATTGG+AGG 0.507964 tig0019471:+13305 None:intergenic
AAATCATAGTAATTACACTT+TGG 0.508911 tig0019471:-7125 Msa1374210:three_prime_UTR
ATCACTATCTCTACTGACCT+TGG 0.510201 tig0019471:+12263 None:intergenic
GCTTCTAGAATTAATACATA+AGG 0.513253 tig0019471:+11589 None:intergenic
CTGCAATGAAGGCTTTGGTA+AGG 0.516682 tig0019471:-12316 Msa1374210:intron
CTTTGGGTAGTACTCTTGAC+AGG 0.517774 tig0019471:-11735 Msa1374210:intron
TATCACTGGTGATCTCTTCA+GGG 0.525143 tig0019471:-12156 Msa1374210:CDS
CAGTCGTTGTACAGAGGAGC+GGG 0.528087 tig0019471:+13065 None:intergenic
AAGATTCCTTGAGAAGATCT+GGG 0.529508 tig0019471:-9253 Msa1374210:CDS
GATCTTCGACCAAGTCCCAC+AGG 0.531721 tig0019471:+12919 None:intergenic
GTAGTTACCTCAAAATATGA+TGG 0.532512 tig0019471:-11963 Msa1374210:CDS
AAAAGAAACTGTACCTGCAA+TGG 0.533749 tig0019471:+9203 None:intergenic
AACTGTACCTGCAATGGACC+CGG 0.533940 tig0019471:+9209 None:intergenic
ATCAAGGAGACAGAATATCT+CGG 0.538498 tig0019471:-8582 Msa1374210:CDS
GTTGACACAAGTCCTCCAAT+TGG 0.538762 tig0019471:-13317 Msa1374210:five_prime_UTR
ACTGGATGATCTGGTTTCAC+CGG 0.539360 tig0019471:+11326 None:intergenic
TGTCCGTAAACTCATGCTCA+GGG 0.540648 tig0019471:-12701 Msa1374210:CDS
ACAGTAGTATTCTGAGCACC+AGG 0.541242 tig0019471:+12763 None:intergenic
CTCTGACTTGGATCCCCTGA+AGG 0.545090 tig0019471:+11562 None:intergenic
GAATTGGACTGACAACTGAC+AGG 0.546532 tig0019471:+13349 None:intergenic
AAGGAAGGCAGATGAAGAGG+TGG 0.546607 tig0019471:-12297 Msa1374210:CDS
GTCAGTAGAGATAGTGATTG+GGG 0.546856 tig0019471:-12258 Msa1374210:CDS
GAAAGTAGTGTTGATTTGTG+AGG 0.548084 tig0019471:+13113 None:intergenic
TATTTGCTTTGTCCGGCAAG+TGG 0.553339 tig0019471:+8075 None:intergenic
TGGGAATGAGCTTTATGAGC+TGG 0.553677 tig0019471:-8185 Msa1374210:intron
AGTGATAGTTGAGCGGGCAG+TGG 0.554082 tig0019471:+12172 None:intergenic
GGCTTGGTTCTCTCTGTTGG+CGG 0.554436 tig0019471:-11622 Msa1374210:CDS
AGGTGGTAGAGCTGCTTCCA+AGG 0.555546 tig0019471:-12280 Msa1374210:CDS
GACTATACGTACTGATGATG+TGG 0.555620 tig0019471:-12839 Msa1374210:CDS
AAATCTGAATCTTCACTGGA+TGG 0.556032 tig0019471:-12020 Msa1374210:CDS
ACGAGTACGTTGCTGAGGAT+GGG 0.556225 tig0019471:-8204 Msa1374210:CDS
AGAACTTGCTCCCGCCTGGA+AGG 0.556592 tig0019471:+9404 None:intergenic
TCAAGGAGACAGAATATCTC+GGG 0.556593 tig0019471:-8581 Msa1374210:intron
GAAGAATACCTGAACATCCC+TGG 0.556642 tig0019471:-8021 Msa1374210:exon
ATCTGTCATGATAGGTATGA+GGG 0.558247 tig0019471:-11643 Msa1374210:intron
AGTAAATGCGTCAAAGAACC+AGG 0.559462 tig0019471:-10491 Msa1374210:CDS
GACGGAACCTTACTTGTAGG+AGG 0.563579 tig0019471:+7985 None:intergenic
GCTCAGGGGTTACTCTGTCA+AGG 0.566034 tig0019471:-12686 Msa1374210:intron
ACGGTTTGAGCCTAGAAGAC+AGG 0.567499 tig0019471:-11270 Msa1374210:intron
GATGCTCTTCTTGTTCGTGA+AGG 0.569216 tig0019471:-12808 Msa1374210:CDS
ACTGCCCGCTCAACTATCAC+TGG 0.569404 tig0019471:-12170 Msa1374210:CDS
CTCAAAATATGATGGAGGGA+TGG 0.571128 tig0019471:-11955 Msa1374210:CDS
TTCTCCAAGACAGAGAGAGC+TGG 0.571260 tig0019471:+8041 None:intergenic
GCTGCTCCAAACACCAGGGA+TGG 0.572532 tig0019471:-13030 Msa1374210:CDS
GCCTGGAAGGCTCAATACCA+AGG 0.575877 tig0019471:+9417 None:intergenic
AGCAAGTTCTTAAAGCCAAG+AGG 0.576792 tig0019471:-9391 Msa1374210:CDS
CGTGCTCTAATATTTGATCA+AGG 0.579384 tig0019471:-8598 Msa1374210:CDS
AAGAAAATGTAGATATTACA+GGG 0.581726 tig0019471:-7218 Msa1374210:three_prime_UTR
TTTGGAGCAGCGGCTATAGG+AGG 0.582108 tig0019471:+13042 None:intergenic
CTATTTAGTACGTGGAAGCA+CGG 0.584626 tig0019471:-13434 Msa1374210:five_prime_UTR
ATTTGCTTTGTCCGGCAAGT+GGG 0.589515 tig0019471:+8076 None:intergenic
GGGTATGTCTTCAATAGAGG+TGG 0.590645 tig0019471:-11790 Msa1374210:CDS
GTTACCTCAAAATATGATGG+AGG 0.594354 tig0019471:-11960 Msa1374210:CDS
GGTAAGGAAGGCAGATGAAG+AGG 0.596194 tig0019471:-12300 Msa1374210:CDS
AATGAAGGCTTTGGTAAGGA+AGG 0.596671 tig0019471:-12312 Msa1374210:intron
GGGATGGCAAACTCACACAT+AGG 0.598239 tig0019471:+12784 None:intergenic
GAGGTATGTTCTCCAGGCCA+GGG 0.602858 tig0019471:+8004 None:intergenic
GCAAGTTCTTAAAGCCAAGA+GGG 0.604143 tig0019471:-9390 Msa1374210:intron
GACAACTGACAGGAATCGGA+TGG 0.607102 tig0019471:+13359 None:intergenic
AGTAGTGTTGATTTGTGAGG+AGG 0.608720 tig0019471:+13116 None:intergenic
GGATACACAATAGTTCGTCC+GGG 0.610507 tig0019471:-9227 Msa1374210:CDS
GCAGCAATTGTTGTTGCTGA+AGG 0.611171 tig0019471:+13195 None:intergenic
GGGCATCAGTTGTGCTGATG+TGG 0.616066 tig0019471:-8367 Msa1374210:CDS
TGGGACTTGGTCGAAGATCG+CGG 0.620126 tig0019471:-12915 Msa1374210:CDS
CTCTTCAGGGTTGATCAGCA+AGG 0.623616 tig0019471:-12143 Msa1374210:CDS
AGTATTCTGAGCACCAGGGA+TGG 0.632012 tig0019471:+12768 None:intergenic
TATGAAAACACCTACAGGCA+AGG 0.632269 tig0019471:+10429 None:intergenic
TTACCTCAAAATATGATGGA+GGG 0.640633 tig0019471:-11959 Msa1374210:CDS
TCCAAGCCCAGATCTTCTCA+AGG 0.642912 tig0019471:+9247 None:intergenic
CTCGACGACGTCAACCCTGT+GGG 0.648664 tig0019471:-12934 Msa1374210:CDS
AGGAGGCAGTCGTTGTACAG+AGG 0.649342 tig0019471:+13059 None:intergenic
TCTAGAAGCTGGTCCTTCAG+GGG 0.650111 tig0019471:-11575 Msa1374210:CDS
ATCTTCGACCAAGTCCCACA+GGG 0.651382 tig0019471:+12920 None:intergenic
TGGTGATCCAAACACAGTCA+AGG 0.654891 tig0019471:-12231 Msa1374210:CDS
ATGTTACGAGTACGTTGCTG+AGG 0.656759 tig0019471:-8209 Msa1374210:CDS
ATAATGAATTGAAAATGCAG+TGG 0.657643 tig0019471:+13270 None:intergenic
AACACTCCCTATTTAGTACG+TGG 0.661051 tig0019471:-13442 Msa1374210:five_prime_UTR
GATCACCAGTGATAGTTGAG+CGG 0.662278 tig0019471:+12165 None:intergenic
GCAGTCGTTGTACAGAGGAG+CGG 0.662658 tig0019471:+13064 None:intergenic
TCTCGACGACGTCAACCCTG+TGG 0.668504 tig0019471:-12935 Msa1374210:CDS
GCTGACAGGAAGAACCTGGT+GGG 0.669326 tig0019471:-8624 Msa1374210:intron
TATACGTACTGATGATGTGG+AGG 0.669817 tig0019471:-12836 Msa1374210:CDS
TTGGTATTGAGCCTTCCAGG+CGG 0.672929 tig0019471:-9415 Msa1374210:CDS
TGCTGACAGGAAGAACCTGG+TGG 0.676407 tig0019471:-8625 Msa1374210:intron
AATTGTTGTTGCTGAAGGTG+AGG 0.678588 tig0019471:+13200 None:intergenic
CTGTCAAGAGTACTACCCAA+AGG 0.683886 tig0019471:+11736 None:intergenic
GATGGATGGGAAGTTCGTCA+AGG 0.684473 tig0019471:-12002 Msa1374210:CDS
ATCGCGGCAGATATTCGATG+AGG 0.685359 tig0019471:-12899 Msa1374210:CDS
GTCCGTAAACTCATGCTCAG+GGG 0.688942 tig0019471:-12700 Msa1374210:CDS
AGCCGCTGCTCCAAACACCA+GGG 0.697507 tig0019471:-13034 Msa1374210:CDS
CAGTAGTATTCTGAGCACCA+GGG 0.701255 tig0019471:+12764 None:intergenic
TGTGGCCGATATATGTGTGA+AGG 0.705155 tig0019471:-8349 Msa1374210:CDS
AGAAAATGTAGATATTACAG+GGG 0.712636 tig0019471:-7217 Msa1374210:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAAAATAAAATATA+GGG + tig0019471:8781-8800 None:intergenic 0.0%
!! TAAAATTAAAAATAAAATAT+AGG + tig0019471:8782-8801 None:intergenic 0.0%
!!! TATATTTTATTTTTAATTTT+AGG - tig0019471:8781-8800 Msa1374210:intron 0.0%
!!! ATATTTTATTTTTAATTTTA+GGG - tig0019471:8782-8801 Msa1374210:intron 0.0%
!! TATGTATGTATAAAATAAAA+TGG - tig0019471:8110-8129 Msa1374210:intron 10.0%
!! ATTTAATAAATTACATTAGA+AGG - tig0019471:9476-9495 Msa1374210:intron 10.0%
!!! ATTATTTATCTTTATTGATT+TGG - tig0019471:10650-10669 Msa1374210:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + tig0019471:11837-11856 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + tig0019471:11838-11857 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0019471:9967-9986 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0019471:9967-9986 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0019471:9967-9986 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0019471:9967-9986 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0019471:9967-9986 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0019471:9967-9986 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0019471:9967-9986 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0019471:9967-9986 None:intergenic 100.0%
!! AATATCCAATAACATAATTA+AGG + tig0019471:8166-8185 None:intergenic 15.0%
!! ACAAATTTAAGTAAAAGATT+CGG + tig0019471:9371-9390 None:intergenic 15.0%
!!! TTTTTATCTTTTATACTATG+AGG + tig0019471:9627-9646 None:intergenic 15.0%
!!! AGATAAAAAAATGTTGTTTT+AGG - tig0019471:9638-9657 Msa1374210:intron 15.0%
!!! TTTTCTTATAATAAAATGCA+AGG - tig0019471:10383-10402 Msa1374210:intron 15.0%
!!! AGTTTTCAATTTAAAATACT+TGG - tig0019471:10703-10722 Msa1374210:intron 15.0%
!!! GTTTTCAATTTAAAATACTT+GGG - tig0019471:10704-10723 Msa1374210:intron 15.0%
!! TTTAAATACATTCACAAAAT+TGG + tig0019471:11519-11538 None:intergenic 15.0%
!! AATTAGAGTTATATTGTATT+GGG + tig0019471:11772-11791 None:intergenic 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + tig0019471:11773-11792 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + tig0019471:11836-11855 None:intergenic 15.0%
!!! TTCAATTTTTCAAAAATCAA+AGG + tig0019471:12747-12766 None:intergenic 15.0%
!! ATCAATAAATAAATTGCATT+AGG - tig0019471:12786-12805 Msa1374210:CDS 15.0%
!! ACATATATCAAAATATAATG+TGG - tig0019471:13075-13094 Msa1374210:CDS 15.0%
!! TTAAGTATTCATTTAAATTG+TGG - tig0019471:13230-13249 Msa1374210:five_prime_UTR 15.0%
!!! AATATCTACATTTTCTTTTT+TGG + tig0019471:13371-13390 None:intergenic 15.0%
!!! ATAAAATGGTTAATTTTCCT+TGG - tig0019471:8124-8143 Msa1374210:intron 20.0%
!! ATTCACCTTAATTATGTTAT+TGG - tig0019471:8158-8177 Msa1374210:intron 20.0%
!! AATAATCTTGCAAAAAATGT+TGG + tig0019471:8734-8753 None:intergenic 20.0%
!! TTAATGTATGTACAAGAAAA+GGG + tig0019471:9298-9317 None:intergenic 20.0%
!! TTGTACATACATTAACAATA+CGG - tig0019471:9303-9322 Msa1374210:intron 20.0%
!!! TTAAATTTGTCTTCTGTTTT+TGG - tig0019471:9381-9400 Msa1374210:intron 20.0%
!! ACTTGTAAGGAAAAATAAAA+GGG + tig0019471:9737-9756 None:intergenic 20.0%
!! TACTTGTAAGGAAAAATAAA+AGG + tig0019471:9738-9757 None:intergenic 20.0%
!! TTCTATAATTCTGTTACTAA+TGG + tig0019471:9792-9811 None:intergenic 20.0%
!!! AGGTATATTGATTGATATTT+TGG - tig0019471:10836-10855 Msa1374210:intron 20.0%
!! TGCATTGGATTAATTATTAA+TGG - tig0019471:11443-11462 Msa1374210:intron 20.0%
!! AATTATTAATGGCTTAAGAT+TGG - tig0019471:11454-11473 Msa1374210:intron 20.0%
!!! GACACTTTTTTTTAGTAAAT+GGG + tig0019471:11703-11722 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + tig0019471:11740-11759 None:intergenic 20.0%
!! AAAGTGGAATATATTGAATT+GGG + tig0019471:11813-11832 None:intergenic 20.0%
!! CAATAATCAAAATTGTTTAC+GGG + tig0019471:12163-12182 None:intergenic 20.0%
!! CCAATAATCAAAATTGTTTA+CGG + tig0019471:12164-12183 None:intergenic 20.0%
!!! ATTTTGATTATTGGAATAAC+TGG - tig0019471:12170-12189 Msa1374210:CDS 20.0%
!!! TGAAAATGTTAAGTTTCTTT+TGG + tig0019471:12350-12369 None:intergenic 20.0%
!!! ATTTTTCTGTATATATTCAC+AGG - tig0019471:12675-12694 Msa1374210:intron 20.0%
!! CAAATTGAATGGAAATAATA+CGG + tig0019471:13159-13178 None:intergenic 20.0%
!! AAAGAAAATGTAGATATTAC+AGG - tig0019471:13373-13392 Msa1374210:five_prime_UTR 20.0%
!! AAGAAAATGTAGATATTACA+GGG - tig0019471:13374-13393 Msa1374210:five_prime_UTR 20.0%
! ATAATGAATTGAAAATGCAG+TGG + tig0019471:7325-7344 None:intergenic 25.0%
!! AGATTGATTTAGAAACTAAC+TGG + tig0019471:7995-8014 None:intergenic 25.0%
!! AGTTAGTTTCTAAATCAATC+TGG - tig0019471:7994-8013 Msa1374210:intron 25.0%
!! GTTAGTTTCTAAATCAATCT+GGG - tig0019471:7995-8014 Msa1374210:intron 25.0%
! TTAGTTTCTAAATCAATCTG+GGG - tig0019471:7996-8015 Msa1374210:intron 25.0%
!! TTTGATTGGCTAAAAAACAT+GGG + tig0019471:8046-8065 None:intergenic 25.0%
! GAATGTGAAATTGCTAAATA+TGG + tig0019471:8074-8093 None:intergenic 25.0%
! TCAAATCATTTCTGACAAAT+CGG + tig0019471:8211-8230 None:intergenic 25.0%
!! TAATCTATCTAAAGCATTTC+AGG - tig0019471:8478-8497 Msa1374210:intron 25.0%
! ATTTAAATCTGAATCTTCAC+TGG - tig0019471:8568-8587 Msa1374210:intron 25.0%
!!! GCTTCTAGAATTAATACATA+AGG + tig0019471:9006-9025 None:intergenic 25.0%
!! TATGTATTAATTCTAGAAGC+TGG - tig0019471:9006-9025 Msa1374210:intron 25.0%
! AAATACAATTTACTCTGACT+TGG + tig0019471:9045-9064 None:intergenic 25.0%
!! AAGAATCATTCTCATTTTAG+TGG - tig0019471:9101-9120 Msa1374210:intron 25.0%
! GTTAATGTATGTACAAGAAA+AGG + tig0019471:9299-9318 None:intergenic 25.0%
! TAAAAGATTCGGAAACAATA+AGG + tig0019471:9360-9379 None:intergenic 25.0%
! AAATAGTATTTAATCACCAC+TGG - tig0019471:9503-9522 Msa1374210:intron 25.0%
! TTGTAAGGAAAAATAAAAGG+GGG + tig0019471:9735-9754 None:intergenic 25.0%
! CTTGTAAGGAAAAATAAAAG+GGG + tig0019471:9736-9755 None:intergenic 25.0%
! TAACAAAAGCAAGTAAATAG+GGG + tig0019471:9939-9958 None:intergenic 25.0%
! GTAACAAAAGCAAGTAAATA+GGG + tig0019471:9940-9959 None:intergenic 25.0%
! TGTAACAAAAGCAAGTAAAT+AGG + tig0019471:9941-9960 None:intergenic 25.0%
!!! TTTCGTATGACTTTTTTCTT+TGG - tig0019471:10605-10624 Msa1374210:intron 25.0%
! TTAAATTGAAAACTATCAGC+AGG + tig0019471:10697-10716 None:intergenic 25.0%
! TTATTGACACTCTTTCATTT+AGG - tig0019471:10816-10835 Msa1374210:intron 25.0%
!!! TATTTTGGAGAAAATCATGA+AGG - tig0019471:10851-10870 Msa1374210:intron 25.0%
!!! ATTTTGGAGAAAATCATGAA+GGG - tig0019471:10852-10871 Msa1374210:intron 25.0%
! ACATGAAACTAAGACAAAAT+CGG + tig0019471:11150-11169 None:intergenic 25.0%
!!! ATGTTCCTTTTTGTTATGTT+TGG - tig0019471:11285-11304 Msa1374210:CDS 25.0%
! CATTCAAAAACATATTCTAC+CGG + tig0019471:11423-11442 None:intergenic 25.0%
!!! ATATGTTTTTGAATGTGCAT+TGG - tig0019471:11428-11447 Msa1374210:intron 25.0%
!! TAATATTGAGTGGATTTAGA+GGG + tig0019471:11593-11612 None:intergenic 25.0%
! TAAATCCACTCAATATTAGA+GGG - tig0019471:11595-11614 Msa1374210:CDS 25.0%
!!! GGACACTTTTTTTTAGTAAA+TGG + tig0019471:11704-11723 None:intergenic 25.0%
! GAAAGTGGAATATATTGAAT+TGG + tig0019471:11814-11833 None:intergenic 25.0%
!!! TTCTTGTTTTTAGGTTTCTT+CGG - tig0019471:12103-12122 Msa1374210:CDS 25.0%
!!! CCGTAAACAATTTTGATTAT+TGG - tig0019471:12161-12180 Msa1374210:CDS 25.0%
! TGCCAAATGTCATAATTTAT+AGG - tig0019471:12204-12223 Msa1374210:CDS 25.0%
! GCCAAATGTCATAATTTATA+GGG - tig0019471:12205-12224 Msa1374210:CDS 25.0%
!!! GATTATTTTTGTGTCTAATC+AGG - tig0019471:12490-12509 Msa1374210:intron 25.0%
!! AATTTAACTGTGCAGATTTT+AGG + tig0019471:12704-12723 None:intergenic 25.0%
!! AGTGTAAAAATACCGAATTT+TGG - tig0019471:12837-12856 Msa1374210:CDS 25.0%
!! TGTTTCTCTAAAAATACCTT+TGG - tig0019471:12862-12881 Msa1374210:CDS 25.0%
! AGTAGTATACACAAATTGAA+TGG + tig0019471:13170-13189 None:intergenic 25.0%
! AGTATTCATTTAAATTGTGG+TGG - tig0019471:13233-13252 Msa1374210:five_prime_UTR 25.0%
! AGAAAATGTAGATATTACAG+GGG - tig0019471:13375-13394 Msa1374210:five_prime_UTR 25.0%
! GGAATTCATCATATTTTGTG+TGG - tig0019471:7179-7198 Msa1374210:three_prime_UTR 30.0%
TGTCAACTTCAAATCTGAAT+TGG + tig0019471:7262-7281 None:intergenic 30.0%
AATACAACACTTTCACTTTC+AGG - tig0019471:7451-7470 Msa1374210:intron 30.0%
!! AATACTACTGTACTTGTTGT+TGG - tig0019471:7841-7860 Msa1374210:intron 30.0%
AACTAACTGGTCATCAATTA+TGG + tig0019471:7982-8001 None:intergenic 30.0%
! GTTTGATTGGCTAAAAAACA+TGG + tig0019471:8047-8066 None:intergenic 30.0%
! TAAATATGGTGGTGTTTGAT+TGG + tig0019471:8060-8079 None:intergenic 30.0%
TGTGAAATTGCTAAATATGG+TGG + tig0019471:8071-8090 None:intergenic 30.0%
GACAGTTTCAAAACATAAAC+TGG - tig0019471:8229-8248 Msa1374210:intron 30.0%
!! ATCAACTTTTTCTGCAATGA+AGG - tig0019471:8265-8284 Msa1374210:intron 30.0%
GTAGTTACCTCAAAATATGA+TGG - tig0019471:8629-8648 Msa1374210:intron 30.0%
! TTACCTCAAAATATGATGGA+GGG - tig0019471:8633-8652 Msa1374210:intron 30.0%
ATTCTCAGTGAACTCAAATT+TGG + tig0019471:8666-8685 None:intergenic 30.0%
! AAATTTGAGTTCACTGAGAA+TGG - tig0019471:8665-8684 Msa1374210:intron 30.0%
AAAAAAGCTTTCTCTACCTT+TGG - tig0019471:8840-8859 Msa1374210:intron 30.0%
AAAAAGCTTTCTCTACCTTT+GGG - tig0019471:8841-8860 Msa1374210:intron 30.0%
TGCAAGAATTAGTACAAAAG+TGG - tig0019471:9065-9084 Msa1374210:intron 30.0%
GCAAGAATTAGTACAAAAGT+GGG - tig0019471:9066-9085 Msa1374210:intron 30.0%
! TACAAAAGTGGGATTTTGTA+GGG - tig0019471:9077-9096 Msa1374210:intron 30.0%
ATTCGGAAACAATAAGGTAT+TGG + tig0019471:9354-9373 None:intergenic 30.0%
AAAGCCAGTTATTGAACTAA+TGG + tig0019471:9580-9599 None:intergenic 30.0%
!!! ATGTTGTTTTAGGACATTCA+AGG - tig0019471:9648-9667 Msa1374210:intron 30.0%
TAAAAGTTGTTACTAGACAG+AGG + tig0019471:9690-9709 None:intergenic 30.0%
TGTAAGGAAAAATAAAAGGG+GGG + tig0019471:9734-9753 None:intergenic 30.0%
TTAGAAACCAAGCAATAGTT+AGG - tig0019471:9895-9914 Msa1374210:intron 30.0%
AACAAAAGCAAGTAAATAGG+GGG + tig0019471:9938-9957 None:intergenic 30.0%
! TCTGAAACAAGAGTGAATAT+AGG + tig0019471:10071-10090 None:intergenic 30.0%
! TATATTCACTCTTGTTTCAG+AGG - tig0019471:10070-10089 Msa1374210:intron 30.0%
AAATGTATGAAAACACCTAC+AGG + tig0019471:10171-10190 None:intergenic 30.0%
ATATGCTTGTCTAATGTTCA+TGG - tig0019471:10228-10247 Msa1374210:intron 30.0%
TTTCTATCTTCTTGAAGATG+TGG - tig0019471:10478-10497 Msa1374210:CDS 30.0%
GAGTTGAAGTTTATAAGACA+TGG + tig0019471:10522-10541 None:intergenic 30.0%
ATGTAACATAACAGCATCAA+AGG + tig0019471:10562-10581 None:intergenic 30.0%
! CAATTTAAAATACTTGGGTC+TGG - tig0019471:10709-10728 Msa1374210:intron 30.0%
GTGTCAATAAGTGATTATTG+CGG + tig0019471:10806-10825 None:intergenic 30.0%
GAAAAGAAGAATGCATAACT+AGG - tig0019471:11022-11041 Msa1374210:intron 30.0%
CAATAGAATATACATCTTCC+AGG + tig0019471:11050-11069 None:intergenic 30.0%
TCACATGCAAAACTTACATT+AGG + tig0019471:11103-11122 None:intergenic 30.0%
TTTGTCTTAGTTTCATGTTC+TGG - tig0019471:11152-11171 Msa1374210:intron 30.0%
! CTAATATTGAGTGGATTTAG+AGG + tig0019471:11594-11613 None:intergenic 30.0%
CTAAATCCACTCAATATTAG+AGG - tig0019471:11594-11613 Msa1374210:CDS 30.0%
AAATCCACTCAATATTAGAG+GGG - tig0019471:11596-11615 Msa1374210:CDS 30.0%
! AGTATTTGGTTTAGGGTATA+TGG + tig0019471:11658-11677 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + tig0019471:11829-11848 None:intergenic 30.0%
!!! CATACACGTTTCTTGTTTTT+AGG - tig0019471:12094-12113 Msa1374210:CDS 30.0%
GCCCTATAAATTATGACATT+TGG + tig0019471:12209-12228 None:intergenic 30.0%
! TAACATTTTCAACCTTGTCT+AGG - tig0019471:12359-12378 Msa1374210:intron 30.0%
TGAATGCAGATTAGATCAAA+AGG + tig0019471:12462-12481 None:intergenic 30.0%
! TTTTGATCTAATCTGCATTC+AGG - tig0019471:12461-12480 Msa1374210:intron 30.0%
TTTGATCTAATCTGCATTCA+GGG - tig0019471:12462-12481 Msa1374210:intron 30.0%
AGATAGTTATTTGCTTTGTC+CGG + tig0019471:12527-12546 None:intergenic 30.0%
TAGAAGTAGAAGCAATTTGA+CGG + tig0019471:12628-12647 None:intergenic 30.0%
TAGAGAAACAAGCCAAAATT+CGG + tig0019471:12852-12871 None:intergenic 30.0%
TTGATATATGTATCATCCCT+TGG + tig0019471:13066-13085 None:intergenic 30.0%
!! TTGAACATTGACTCATTTAC+AGG - tig0019471:13269-13288 Msa1374210:five_prime_UTR 30.0%
! TCATCATATTTTGTGTGGCT+TGG - tig0019471:7184-7203 Msa1374210:three_prime_UTR 35.0%
!! GAAAGTAGTGTTGATTTGTG+AGG + tig0019471:7482-7501 None:intergenic 35.0%
! ATCAATCTGGGGTACAAAAA+AGG - tig0019471:8007-8026 Msa1374210:three_prime_UTR 35.0%
GTGAATTGTCTTCTAAACCA+AGG + tig0019471:8144-8163 None:intergenic 35.0%
! TTTTTCTGCAATGAAGGCTT+TGG - tig0019471:8271-8290 Msa1374210:intron 35.0%
TCAGGATCACAACAATCAAT+TGG - tig0019471:8496-8515 Msa1374210:intron 35.0%
AAATCTGAATCTTCACTGGA+TGG - tig0019471:8572-8591 Msa1374210:intron 35.0%
GTTACCTCAAAATATGATGG+AGG - tig0019471:8632-8651 Msa1374210:intron 35.0%
AGGGGTAAAATCAGAATTTC+AGG + tig0019471:8762-8781 None:intergenic 35.0%
TTAGGGTATGTCTTCAATAG+AGG - tig0019471:8799-8818 Msa1374210:intron 35.0%
ATGAGTTCATCTGTCATGAT+AGG - tig0019471:8941-8960 Msa1374210:intron 35.0%
ATCTGTCATGATAGGTATGA+GGG - tig0019471:8949-8968 Msa1374210:intron 35.0%
! GTACAAAAGTGGGATTTTGT+AGG - tig0019471:9076-9095 Msa1374210:intron 35.0%
!! TTCTCATTTTAGTGGCTCTA+TGG - tig0019471:9109-9128 Msa1374210:intron 35.0%
! ACAAGAAAAGGGTCTAAAAC+TGG + tig0019471:9287-9306 None:intergenic 35.0%
CTTTCCGAACCTTTGTAATA+GGG - tig0019471:9601-9620 Msa1374210:intron 35.0%
GACTCTAAGTGATACTTGTA+AGG + tig0019471:9750-9769 None:intergenic 35.0%
! TCTGTTACTAATGGACGTAA+TGG + tig0019471:9783-9802 None:intergenic 35.0%
AAGTAAAACAGGTTTGTGGT+GGG + tig0019471:9852-9871 None:intergenic 35.0%
TAAGTAAAACAGGTTTGTGG+TGG + tig0019471:9853-9872 None:intergenic 35.0%
! ACCACAAACCTGTTTTACTT+AGG - tig0019471:9852-9871 Msa1374210:intron 35.0%
TCCTAAGTAAAACAGGTTTG+TGG + tig0019471:9856-9875 None:intergenic 35.0%
AGAATGGTCCTAAGTAAAAC+AGG + tig0019471:9863-9882 None:intergenic 35.0%
CTTATTGCCTAACTATTGCT+TGG + tig0019471:9905-9924 None:intergenic 35.0%
GAGAAGCTTTCAGCTAATAT+TGG - tig0019471:10128-10147 Msa1374210:intron 35.0%
TATATAAAAGCCTTGCCTGT+AGG - tig0019471:10153-10172 Msa1374210:intron 35.0%
AAATGTTCAGAGCGATGATA+AGG - tig0019471:10340-10359 Msa1374210:intron 35.0%
AAAATGCAAGGATACCAACA+AGG - tig0019471:10395-10414 Msa1374210:intron 35.0%
! GGACAAGCTTTTAGTAAAAC+TGG - tig0019471:10776-10795 Msa1374210:intron 35.0%
TCAGATTACTAGAATCAAGC+AGG + tig0019471:10997-11016 None:intergenic 35.0%
GGTGACCAAACATAACAAAA+AGG + tig0019471:11293-11312 None:intergenic 35.0%
AAGATTCCTTGAGAAGATCT+GGG - tig0019471:11339-11358 Msa1374210:CDS 35.0%
AAAAGAAACTGTACCTGCAA+TGG + tig0019471:11392-11411 None:intergenic 35.0%
GATTTAGAGGGAAAGAAGAT+GGG + tig0019471:11552-11571 None:intergenic 35.0%
GATTTAGAGGGAAAGAAGAT+GGG + tig0019471:11552-11571 None:intergenic 35.0%
! TTTGGTTTAGGGTATATGGA+GGG + tig0019471:11654-11673 None:intergenic 35.0%
! ATTTGGTTTAGGGTATATGG+AGG + tig0019471:11655-11674 None:intergenic 35.0%
AGTAAATGGGTCAGATATTC+CGG + tig0019471:11690-11709 None:intergenic 35.0%
!! TGAAATGGCTCAGCTATTTT+GGG + tig0019471:11725-11744 None:intergenic 35.0%
! TTGAAATGGCTCAGCTATTT+TGG + tig0019471:11726-11745 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG - tig0019471:11858-11877 Msa1374210:intron 35.0%
CGTGCTCTAATATTTGATCA+AGG - tig0019471:11994-12013 Msa1374210:CDS 35.0%
ATCAAGGAGACAGAATATCT+CGG - tig0019471:12010-12029 Msa1374210:CDS 35.0%
TCTATTCTTTACTGTCACTG+AGG - tig0019471:12043-12062 Msa1374210:CDS 35.0%
TGTATGATAGCAAATGTTGG+GGG + tig0019471:12080-12099 None:intergenic 35.0%
GTGTATGATAGCAAATGTTG+GGG + tig0019471:12081-12100 None:intergenic 35.0%
CGTGTATGATAGCAAATGTT+GGG + tig0019471:12082-12101 None:intergenic 35.0%
ACGTGTATGATAGCAAATGT+TGG + tig0019471:12083-12102 None:intergenic 35.0%
TGTTTCTTGCAGTTGAATCA+TGG + tig0019471:12273-12292 None:intergenic 35.0%
TTTGATGTGAGTAAACTGCT+TGG - tig0019471:12298-12317 Msa1374210:CDS 35.0%
TTCTACATAGCTGCATCAAA+TGG - tig0019471:12643-12662 Msa1374210:intron 35.0%
TTTCTTCCAGTTGTTGAAGT+AGG - tig0019471:12965-12984 Msa1374210:CDS 35.0%
ATGTTTCCTACTTCAACAAC+TGG + tig0019471:12974-12993 None:intergenic 35.0%
TTGACTACGTCAATCTCTTT+AGG - tig0019471:12993-13012 Msa1374210:CDS 35.0%
!! TCAATCTCTTTAGGACTGAT+CGG - tig0019471:13002-13021 Msa1374210:CDS 35.0%
GTGCAGTCAATAATACTCTA+TGG - tig0019471:13032-13051 Msa1374210:CDS 35.0%
ATATGTATCATCCCTTGGTT+GGG + tig0019471:13061-13080 None:intergenic 35.0%
TATATGTATCATCCCTTGGT+TGG + tig0019471:13062-13081 None:intergenic 35.0%
TAAGAGGGATAAATGGATCA+TGG + tig0019471:13101-13120 None:intergenic 35.0%
TTGTGTATACTACTGTCACT+TGG - tig0019471:13176-13195 Msa1374210:CDS 35.0%
! CTCATTTACAGGTCTTTTCA+AGG - tig0019471:13280-13299 Msa1374210:five_prime_UTR 35.0%
!! TTTACAGGTCTTTTCAAGGA+TGG - tig0019471:13284-13303 Msa1374210:five_prime_UTR 35.0%
AGATATTACAGGGGACTAAT+TGG - tig0019471:13384-13403 Msa1374210:five_prime_UTR 35.0%
AACACTCCCTATTTAGTACG+TGG - tig0019471:7150-7169 Msa1374210:three_prime_UTR 40.0%
GTGCTTCCACGTACTAAATA+GGG + tig0019471:7159-7178 None:intergenic 40.0%
CTATTTAGTACGTGGAAGCA+CGG - tig0019471:7158-7177 Msa1374210:three_prime_UTR 40.0%
! AATTGTTGTTGCTGAAGGTG+AGG + tig0019471:7395-7414 None:intergenic 40.0%
!! AGTAGTGTTGATTTGTGAGG+AGG + tig0019471:7479-7498 None:intergenic 40.0%
GAGGTTTGGAGAAAATTCTC+TGG - tig0019471:7712-7731 Msa1374210:intron 40.0%
TTGGAGAAAATTCTCTGGAC+TGG - tig0019471:7717-7736 Msa1374210:intron 40.0%
TGGAGAAAATTCTCTGGACT+GGG - tig0019471:7718-7737 Msa1374210:intron 40.0%
! GACTATACGTACTGATGATG+TGG - tig0019471:7753-7772 Msa1374210:intron 40.0%
! TATACGTACTGATGATGTGG+AGG - tig0019471:7756-7775 Msa1374210:intron 40.0%
GGACAACAATTCGACCTATA+CGG + tig0019471:7876-7895 None:intergenic 40.0%
TTGGCTAAAAAACATGGGAC+TGG + tig0019471:8041-8060 None:intergenic 40.0%
! AATGAAGGCTTTGGTAAGGA+AGG - tig0019471:8280-8299 Msa1374210:intron 40.0%
ATCACTATCTCTACTGACCT+TGG + tig0019471:8332-8351 None:intergenic 40.0%
AGGTCAGTAGAGATAGTGAT+TGG - tig0019471:8332-8351 Msa1374210:CDS 40.0%
GGTCAGTAGAGATAGTGATT+GGG - tig0019471:8333-8352 Msa1374210:CDS 40.0%
GTCAGTAGAGATAGTGATTG+GGG - tig0019471:8334-8353 Msa1374210:CDS 40.0%
TATCACTGGTGATCTCTTCA+GGG - tig0019471:8436-8455 Msa1374210:intron 40.0%
TGAATCTTCACTGGATGGAT+GGG - tig0019471:8577-8596 Msa1374210:intron 40.0%
! CATCCCTCCATCATATTTTG+AGG + tig0019471:8639-8658 None:intergenic 40.0%
! CTCAAAATATGATGGAGGGA+TGG - tig0019471:8637-8656 Msa1374210:intron 40.0%
!!! CTGCTGTTTTCTCAGGTATA+TGG - tig0019471:8690-8709 Msa1374210:intron 40.0%
! GTTTTCTCAGGTATATGGAG+AGG - tig0019471:8695-8714 Msa1374210:intron 40.0%
CATCTGTCATGATAGGTATG+AGG - tig0019471:8948-8967 Msa1374210:intron 40.0%
CCTGTCATGGTAATACAGAT+AGG + tig0019471:9220-9239 None:intergenic 40.0%
CCTATCTGTATTACCATGAC+AGG - tig0019471:9217-9236 Msa1374210:CDS 40.0%
!! GCCATTTTCATCATTTCGTC+CGG - tig0019471:9247-9266 Msa1374210:CDS 40.0%
ACCGGACGAAATGATGAAAA+TGG + tig0019471:9251-9270 None:intergenic 40.0%
TTGGACATTACCTGTCTTCT+AGG + tig0019471:9335-9354 None:intergenic 40.0%
TCAGAGACAAGACAAATGCA+AGG + tig0019471:9408-9427 None:intergenic 40.0%
TCGAGGTTCAAATGTTCAAC+CGG + tig0019471:9547-9566 None:intergenic 40.0%
GGCTCCATTAGTTCAATAAC+TGG - tig0019471:9573-9592 Msa1374210:intron 40.0%
GCTTTCCGAACCTTTGTAAT+AGG - tig0019471:9600-9619 Msa1374210:intron 40.0%
ACTATGAGGCCCTATTACAA+AGG + tig0019471:9613-9632 None:intergenic 40.0%
GAAAAATAAAAGGGGGGAAG+GGG + tig0019471:9728-9747 None:intergenic 40.0%
GGAAAAATAAAAGGGGGGAA+GGG + tig0019471:9729-9748 None:intergenic 40.0%
AGGAAAAATAAAAGGGGGGA+AGG + tig0019471:9730-9749 None:intergenic 40.0%
! AAGAATAGACGGGGTTAGTA+AGG + tig0019471:9829-9848 None:intergenic 40.0%
! TTTGTGGTGGGAAGAATAGA+CGG + tig0019471:9840-9859 None:intergenic 40.0%
CTATTGCTTGGTTTCTAAGC+AGG + tig0019471:9893-9912 None:intergenic 40.0%
AAGTCTGCGCAGAAAAAAGA+GGG + tig0019471:9997-10016 None:intergenic 40.0%
AGTAAATGCGTCAAAGAACC+AGG - tig0019471:10101-10120 Msa1374210:intron 40.0%
TATGAAAACACCTACAGGCA+AGG + tig0019471:10166-10185 None:intergenic 40.0%
CAACAAGGCAACTATAGTGT+GGG - tig0019471:10410-10429 Msa1374210:intron 40.0%
TTGTCCAATTGCTGACAACT+TGG - tig0019471:10755-10774 Msa1374210:intron 40.0%
TTGTCCAAGTTGTCAGCAAT+TGG + tig0019471:10762-10781 None:intergenic 40.0%
TTAGTTTCATGTTCTGGCCT+TGG - tig0019471:11158-11177 Msa1374210:intron 40.0%
AGCAAGTTCTTAAAGCCAAG+AGG - tig0019471:11201-11220 Msa1374210:intron 40.0%
GCAAGTTCTTAAAGCCAAGA+GGG - tig0019471:11202-11221 Msa1374210:intron 40.0%
AACAAATGAACCTACCCTCT+TGG + tig0019471:11219-11238 None:intergenic 40.0%
GAAGATTCCTTGAGAAGATC+TGG - tig0019471:11338-11357 Msa1374210:CDS 40.0%
TGGATACACAATAGTTCGTC+CGG - tig0019471:11364-11383 Msa1374210:intron 40.0%
! CAGTTTCTTTTGTAGTGTGC+CGG - tig0019471:11401-11420 Msa1374210:intron 40.0%
GGATTTAGAGGGAAAGAAGA+TGG + tig0019471:11553-11572 None:intergenic 40.0%
GGATTTAGAGGGAAAGAAGA+TGG + tig0019471:11553-11572 None:intergenic 40.0%
! TTGGTTTAGGGTATATGGAG+GGG + tig0019471:11653-11672 None:intergenic 40.0%
GTAAATGGGTCAGATATTCC+GGG + tig0019471:11689-11708 None:intergenic 40.0%
! GACTTGAATGTTTTGCTGAC+AGG - tig0019471:11954-11973 Msa1374210:CDS 40.0%
TCAAGGAGACAGAATATCTC+GGG - tig0019471:12011-12030 Msa1374210:CDS 40.0%
TAGCAAATGTTGGGGGAAAT+AGG + tig0019471:12073-12092 None:intergenic 40.0%
GAGTGCCTTCACACATATAT+CGG + tig0019471:12251-12270 None:intergenic 40.0%
ACTCGTAACATACCTAGACA+AGG + tig0019471:12374-12393 None:intergenic 40.0%
GAACATACCTCCTACAAGTA+AGG - tig0019471:12600-12619 Msa1374210:intron 40.0%
TTTGACGGAACCTTACTTGT+AGG + tig0019471:12613-12632 None:intergenic 40.0%
GATCCATTTATCCCTCTTAG+AGG - tig0019471:13102-13121 Msa1374210:CDS 40.0%
CGTGCTTCCACGTACTAAAT+AGG + tig0019471:7160-7179 None:intergenic 45.0%
GACTGACAACTGACAGGAAT+CGG + tig0019471:7240-7259 None:intergenic 45.0%
GAATTGGACTGACAACTGAC+AGG + tig0019471:7246-7265 None:intergenic 45.0%
GTTGACACAAGTCCTCCAAT+TGG - tig0019471:7275-7294 Msa1374210:three_prime_UTR 45.0%
! GCAGCAATTGTTGTTGCTGA+AGG + tig0019471:7400-7419 None:intergenic 45.0%
!!! GCTGCTTTTTGGTGTATGAG+AGG + tig0019471:7504-7523 None:intergenic 45.0%
GGCAGATATTCGATGAGGTT+TGG - tig0019471:7698-7717 Msa1374210:intron 45.0%
GATGCTCTTCTTGTTCGTGA+AGG - tig0019471:7784-7803 Msa1374210:intron 45.0%
CAGTAGTATTCTGAGCACCA+GGG + tig0019471:7831-7850 None:intergenic 45.0%
ACAGTAGTATTCTGAGCACC+AGG + tig0019471:7832-7851 None:intergenic 45.0%
TTGTCCGTAAACTCATGCTC+AGG - tig0019471:7890-7909 Msa1374210:intron 45.0%
TGTCCGTAAACTCATGCTCA+GGG - tig0019471:7891-7910 Msa1374210:intron 45.0%
AACCCCTGAGCATGAGTTTA+CGG + tig0019471:7897-7916 None:intergenic 45.0%
! CTAAAAAACATGGGACTGGC+TGG + tig0019471:8037-8056 None:intergenic 45.0%
! CTGCAATGAAGGCTTTGGTA+AGG - tig0019471:8276-8295 Msa1374210:intron 45.0%
GAGATAGTGATTGGGGATGT+TGG - tig0019471:8341-8360 Msa1374210:CDS 45.0%
TGGTGATCCAAACACAGTCA+AGG - tig0019471:8361-8380 Msa1374210:CDS 45.0%
ATCACCAGTGATAGTTGAGC+GGG + tig0019471:8429-8448 None:intergenic 45.0%
GATCACCAGTGATAGTTGAG+CGG + tig0019471:8430-8449 None:intergenic 45.0%
CTATCACTGGTGATCTCTTC+AGG - tig0019471:8435-8454 Msa1374210:intron 45.0%
CTGAATCTTCACTGGATGGA+TGG - tig0019471:8576-8595 Msa1374210:intron 45.0%
!!! AATGGAGCTGCTGTTTTCTC+AGG - tig0019471:8683-8702 Msa1374210:intron 45.0%
GGGTATGTCTTCAATAGAGG+TGG - tig0019471:8802-8821 Msa1374210:intron 45.0%
!! CTGTCAAGAGTACTACCCAA+AGG + tig0019471:8859-8878 None:intergenic 45.0%
CTTTGGGTAGTACTCTTGAC+AGG - tig0019471:8857-8876 Msa1374210:intron 45.0%
TCATGATAGGTATGAGGGCT+TGG - tig0019471:8954-8973 Msa1374210:intron 45.0%
! ATTCTAGAAGCTGGTCCTTC+AGG - tig0019471:9015-9034 Msa1374210:intron 45.0%
! TTCTAGAAGCTGGTCCTTCA+GGG - tig0019471:9016-9035 Msa1374210:intron 45.0%
AATGGCACTCTAACCTGTCA+TGG + tig0019471:9233-9252 None:intergenic 45.0%
! ACTGGATGATCTGGTTTCAC+CGG + tig0019471:9269-9288 None:intergenic 45.0%
! GGGTCTAAAACTGGATGATC+TGG + tig0019471:9278-9297 None:intergenic 45.0%
TTCAACTGCGATCTTACCAG+TGG + tig0019471:9522-9541 None:intergenic 45.0%
GTAAGATCGCAGTTGAACTC+CGG - tig0019471:9525-9544 Msa1374210:intron 45.0%
GGTTGAACATTTGAACCTCG+AGG - tig0019471:9546-9565 Msa1374210:intron 45.0%
GAGGCCCTATTACAAAGGTT+CGG + tig0019471:9608-9627 None:intergenic 45.0%
TGTTACTAGACAGAGGAGCA+AGG + tig0019471:9683-9702 None:intergenic 45.0%
TATCACTTAGAGTCCTCCAG+TGG - tig0019471:9756-9775 Msa1374210:intron 45.0%
! TAATGGACGTAATGGTCCAC+TGG + tig0019471:9775-9794 None:intergenic 45.0%
! TTGTGGTGGGAAGAATAGAC+GGG + tig0019471:9839-9858 None:intergenic 45.0%
CTAAGCAGGAGCAGTTAGAA+TGG + tig0019471:9879-9898 None:intergenic 45.0%
AGTCTGCGCAGAAAAAAGAG+GGG + tig0019471:9996-10015 None:intergenic 45.0%
CAAGTCTGCGCAGAAAAAAG+AGG + tig0019471:9998-10017 None:intergenic 45.0%
CCACACTATAGTTGCCTTGT+TGG + tig0019471:10412-10431 None:intergenic 45.0%
CCAACAAGGCAACTATAGTG+TGG - tig0019471:10409-10428 Msa1374210:intron 45.0%
AGAATGCATAACTAGGCACC+TGG - tig0019471:11029-11048 Msa1374210:intron 45.0%
GTTCTTAAAGCCAAGAGGGT+AGG - tig0019471:11206-11225 Msa1374210:intron 45.0%
ACCTTAATCCCGAATTCTCC+AGG - tig0019471:11310-11329 Msa1374210:CDS 45.0%
GGATACACAATAGTTCGTCC+GGG - tig0019471:11365-11384 Msa1374210:intron 45.0%
! GATGGGTGAGTGGATTTAGA+GGG + tig0019471:11564-11583 None:intergenic 45.0%
! AGATGGGTGAGTGGATTTAG+AGG + tig0019471:11565-11584 None:intergenic 45.0%
TGCTCCCCTCTAATATTGAG+TGG + tig0019471:11603-11622 None:intergenic 45.0%
! TTTAGGGTATATGGAGGGGA+AGG + tig0019471:11649-11668 None:intergenic 45.0%
!! CGGAGGGAGTATTTGGTTTA+GGG + tig0019471:11665-11684 None:intergenic 45.0%
!! ACGGAGGGAGTATTTGGTTT+AGG + tig0019471:11666-11685 None:intergenic 45.0%
! CCAAACTGGCTCAGATATAC+CGG - tig0019471:11872-11891 Msa1374210:intron 45.0%
! CAAACTGGCTCAGATATACC+GGG - tig0019471:11873-11892 Msa1374210:intron 45.0%
! TTTTGCTGACAGGAAGAACC+TGG - tig0019471:11964-11983 Msa1374210:CDS 45.0%
TGTGGCCGATATATGTGTGA+AGG - tig0019471:12243-12262 Msa1374210:CDS 45.0%
ATGTTACGAGTACGTTGCTG+AGG - tig0019471:12383-12402 Msa1374210:intron 45.0%
! TGGGAATGAGCTTTATGAGC+TGG - tig0019471:12407-12426 Msa1374210:intron 45.0%
ATTTGCTTTGTCCGGCAAGT+GGG + tig0019471:12519-12538 None:intergenic 45.0%
TATTTGCTTTGTCCGGCAAG+TGG + tig0019471:12520-12539 None:intergenic 45.0%
GAAGAATACCTGAACATCCC+TGG - tig0019471:12571-12590 Msa1374210:intron 45.0%
! TTGTAGGAGGTATGTTCTCC+AGG + tig0019471:12597-12616 None:intergenic 45.0%
!! ATACCTTTGGAGTTGCATGC+TGG - tig0019471:12875-12894 Msa1374210:CDS 45.0%
ATTCCAGCATGCAACTCCAA+AGG + tig0019471:12881-12900 None:intergenic 45.0%
TGGAATCACTCTTCTTGAGC+CGG - tig0019471:12895-12914 Msa1374210:CDS 45.0%
! CCACCTCTAAGAGGGATAAA+TGG + tig0019471:13108-13127 None:intergenic 45.0%
CCATTTATCCCTCTTAGAGG+TGG - tig0019471:13105-13124 Msa1374210:CDS 45.0%
! TAGACAGACCACCTCTAAGA+GGG + tig0019471:13116-13135 None:intergenic 45.0%
ATAGACAGACCACCTCTAAG+AGG + tig0019471:13117-13136 None:intergenic 45.0%
!! AAATTAAAAATAAAATATAG+GGG + tig0019471:8780-8799 None:intergenic 5.0%
GACAACTGACAGGAATCGGA+TGG + tig0019471:7236-7255 None:intergenic 50.0%
GATCGCTCGCAATTGCCAAT+TGG + tig0019471:7293-7312 None:intergenic 50.0%
TCTTTGCCATCCCTGGTGTT+TGG + tig0019471:7571-7590 None:intergenic 50.0%
!! GTTGTCGTCGTCGTCGTTTT+GGG + tig0019471:7608-7627 None:intergenic 50.0%
! TGTTGTCGTCGTCGTCGTTT+TGG + tig0019471:7609-7628 None:intergenic 50.0%
ATCTTCGACCAAGTCCCACA+GGG + tig0019471:7675-7694 None:intergenic 50.0%
ATCGCGGCAGATATTCGATG+AGG - tig0019471:7693-7712 Msa1374210:intron 50.0%
GGGATGGCAAACTCACACAT+AGG + tig0019471:7811-7830 None:intergenic 50.0%
ATGTGTGAGTTTGCCATCCC+TGG - tig0019471:7811-7830 Msa1374210:intron 50.0%
AGTATTCTGAGCACCAGGGA+TGG + tig0019471:7827-7846 None:intergenic 50.0%
!! GTTGGTGCTACTAGCCGTAT+AGG - tig0019471:7859-7878 Msa1374210:intron 50.0%
GTCCGTAAACTCATGCTCAG+GGG - tig0019471:7892-7911 Msa1374210:intron 50.0%
GGTAAGGAAGGCAGATGAAG+AGG - tig0019471:8292-8311 Msa1374210:intron 50.0%
AAGGAAGGCAGATGAAGAGG+TGG - tig0019471:8295-8314 Msa1374210:intron 50.0%
ACAGCAGCCTTGACTGTGTT+TGG + tig0019471:8371-8390 None:intergenic 50.0%
ACAGTCAAGGCTGCTGTAGA+AGG - tig0019471:8374-8393 Msa1374210:intron 50.0%
! CTCTTCAGGGTTGATCAGCA+AGG - tig0019471:8449-8468 Msa1374210:intron 50.0%
GATGGATGGGAAGTTCGTCA+AGG - tig0019471:8590-8609 Msa1374210:CDS 50.0%
TCTAGAAGCTGGTCCTTCAG+GGG - tig0019471:9017-9036 Msa1374210:intron 50.0%
ACGGTTTGAGCCTAGAAGAC+AGG - tig0019471:9322-9341 Msa1374210:intron 50.0%
ACATTTGAACCTCGAGGCAG+TGG - tig0019471:9552-9571 Msa1374210:intron 50.0%
GACAGAGGAGCAAGGAATCA+GGG + tig0019471:9675-9694 None:intergenic 50.0%
AGACAGAGGAGCAAGGAATC+AGG + tig0019471:9676-9695 None:intergenic 50.0%
! TGTGGTGGGAAGAATAGACG+GGG + tig0019471:9838-9857 None:intergenic 50.0%
TCTGCGCAGAAAAAAGAGGG+GGG + tig0019471:9994-10013 None:intergenic 50.0%
GTCTGCGCAGAAAAAAGAGG+GGG + tig0019471:9995-10014 None:intergenic 50.0%
GCTGAAAGCTTCTCGAATCC+TGG + tig0019471:10122-10141 None:intergenic 50.0%
TCGGTTTCTTGTCCAGTCTG+CGG + tig0019471:11131-11150 None:intergenic 50.0%
! TTGGTATTGAGCCTTCCAGG+CGG - tig0019471:11177-11196 Msa1374210:intron 50.0%
! TTTAAGAACTTGCTCCCGCC+TGG + tig0019471:11195-11214 None:intergenic 50.0%
GCCTGGAGAATTCGGGATTA+AGG + tig0019471:11314-11333 None:intergenic 50.0%
TAATCCCGAATTCTCCAGGC+AGG - tig0019471:11314-11333 Msa1374210:CDS 50.0%
TTCACCTGCCTGGAGAATTC+GGG + tig0019471:11321-11340 None:intergenic 50.0%
CTTCACCTGCCTGGAGAATT+CGG + tig0019471:11322-11341 None:intergenic 50.0%
TCAAGGAATCTTCACCTGCC+TGG + tig0019471:11331-11350 None:intergenic 50.0%
TCCTTGAGAAGATCTGGGCT+TGG - tig0019471:11344-11363 Msa1374210:CDS 50.0%
TCCAAGCCCAGATCTTCTCA+AGG + tig0019471:11348-11367 None:intergenic 50.0%
AACTGTACCTGCAATGGACC+CGG + tig0019471:11386-11405 None:intergenic 50.0%
AGGGAAAGAAGATGGGTGAG+TGG + tig0019471:11574-11593 None:intergenic 50.0%
ATGGGTCAGATATTCCGGGA+CGG + tig0019471:11685-11704 None:intergenic 50.0%
CCGGTATATCTGAGCCAGTT+TGG + tig0019471:11875-11894 None:intergenic 50.0%
TACGAGTACGTTGCTGAGGA+TGG - tig0019471:12387-12406 Msa1374210:intron 50.0%
ACGAGTACGTTGCTGAGGAT+GGG - tig0019471:12388-12407 Msa1374210:intron 50.0%
! TAATCAGGTTGCCCACTTGC+CGG - tig0019471:12505-12524 Msa1374210:intron 50.0%
TTCTCCAAGACAGAGAGAGC+TGG + tig0019471:12554-12573 None:intergenic 50.0%
GACGGAACCTTACTTGTAGG+AGG + tig0019471:12610-12629 None:intergenic 50.0%
ATCACTCTTCTTGAGCCGGA+AGG - tig0019471:12899-12918 Msa1374210:CDS 50.0%
TCTTCTTGAGCCGGAAGGAT+AGG - tig0019471:12904-12923 Msa1374210:CDS 50.0%
CTTCTTGAGCCGGAAGGATA+GGG - tig0019471:12905-12924 Msa1374210:CDS 50.0%
TTCTTGAGCCGGAAGGATAG+GGG - tig0019471:12906-12925 Msa1374210:CDS 50.0%
TCTACCATCCCCTATCCTTC+CGG + tig0019471:12917-12936 None:intergenic 50.0%
ACTCTATGGAGACCCAACCA+AGG - tig0019471:13046-13065 Msa1374210:CDS 50.0%
CTCTATGGAGACCCAACCAA+GGG - tig0019471:13047-13066 Msa1374210:CDS 50.0%
CGCTCGCAATTGCCAATTGG+AGG + tig0019471:7290-7309 None:intergenic 55.0%
!!! GGAGCGGGTATGCTGCTTTT+TGG + tig0019471:7515-7534 None:intergenic 55.0%
CAGTCGTTGTACAGAGGAGC+GGG + tig0019471:7530-7549 None:intergenic 55.0%
GCAGTCGTTGTACAGAGGAG+CGG + tig0019471:7531-7550 None:intergenic 55.0%
AGGAGGCAGTCGTTGTACAG+AGG + tig0019471:7536-7555 None:intergenic 55.0%
! TTTGGAGCAGCGGCTATAGG+AGG + tig0019471:7553-7572 None:intergenic 55.0%
! GTGTTTGGAGCAGCGGCTAT+AGG + tig0019471:7556-7575 None:intergenic 55.0%
! ATCCCTGGTGTTTGGAGCAG+CGG + tig0019471:7563-7582 None:intergenic 55.0%
! CTTGCTGTCTTTGCCATCCC+TGG + tig0019471:7578-7597 None:intergenic 55.0%
GATCTTCGACCAAGTCCCAC+AGG + tig0019471:7676-7695 None:intergenic 55.0%
! TGGGACTTGGTCGAAGATCG+CGG - tig0019471:7677-7696 Msa1374210:intron 55.0%
! CTGGACTGGGTCAGATCTCT+AGG - tig0019471:7731-7750 Msa1374210:intron 55.0%
GCTCAGGGGTTACTCTGTCA+AGG - tig0019471:7906-7925 Msa1374210:intron 55.0%
AGGTGGTAGAGCTGCTTCCA+AGG - tig0019471:8312-8331 Msa1374210:CDS 55.0%
AGTGATAGTTGAGCGGGCAG+TGG + tig0019471:8423-8442 None:intergenic 55.0%
ACTGCCCGCTCAACTATCAC+TGG - tig0019471:8422-8441 Msa1374210:intron 55.0%
! AATTGGCTCAGTTGCGCGCT+GGG - tig0019471:8513-8532 Msa1374210:intron 55.0%
! GAGGGCTTGGTTCTCTCTGT+TGG - tig0019471:8967-8986 Msa1374210:intron 55.0%
! GGCTTGGTTCTCTCTGTTGG+CGG - tig0019471:8970-8989 Msa1374210:intron 55.0%
GTTCTCTCTGTTGGCGGCAA+TGG - tig0019471:8976-8995 Msa1374210:intron 55.0%
!! CTCTGACTTGGATCCCCTGA+AGG + tig0019471:9033-9052 None:intergenic 55.0%
!! GGGGGGAAGGGGTATTATGT+AGG + tig0019471:9717-9736 None:intergenic 55.0%
TGGACGTAATGGTCCACTGG+AGG + tig0019471:9772-9791 None:intergenic 55.0%
TGCGCAGAAAAAAGAGGGGG+GGG + tig0019471:9992-10011 None:intergenic 55.0%
CTGCGCAGAAAAAAGAGGGG+GGG + tig0019471:9993-10012 None:intergenic 55.0%
! GCCTTGGTATTGAGCCTTCC+AGG - tig0019471:11174-11193 Msa1374210:intron 55.0%
GCCTGGAAGGCTCAATACCA+AGG + tig0019471:11178-11197 None:intergenic 55.0%
! TGGTATTGAGCCTTCCAGGC+GGG - tig0019471:11178-11197 Msa1374210:intron 55.0%
GGGTATATGGAGGGGAAGGA+AGG + tig0019471:11645-11664 None:intergenic 55.0%
ACCAAATACTCCCTCCGTCC+CGG - tig0019471:11668-11687 Msa1374210:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG + tig0019471:11681-11700 None:intergenic 55.0%
CTGGCTCAGATATACCGGGA+CGG - tig0019471:11877-11896 Msa1374210:intron 55.0%
CTCAGATATACCGGGACGGA+GGG - tig0019471:11881-11900 Msa1374210:intron 55.0%
ACATAGTACTCCCTCCGTCC+CGG + tig0019471:11894-11913 None:intergenic 55.0%
TGCTGACAGGAAGAACCTGG+TGG - tig0019471:11967-11986 Msa1374210:CDS 55.0%
GCTGACAGGAAGAACCTGGT+GGG - tig0019471:11968-11987 Msa1374210:CDS 55.0%
! GGGCATCAGTTGTGCTGATG+TGG - tig0019471:12225-12244 Msa1374210:CDS 55.0%
GACACCAGCTCTCTCTGTCT+TGG - tig0019471:12547-12566 Msa1374210:intron 55.0%
ATACCTGAACATCCCTGGCC+TGG - tig0019471:12576-12595 Msa1374210:intron 55.0%
GAGGTATGTTCTCCAGGCCA+GGG + tig0019471:12591-12610 None:intergenic 55.0%
TAGCCGCTGCTCCAAACACC+AGG - tig0019471:7557-7576 Msa1374210:intron 60.0%
AGCCGCTGCTCCAAACACCA+GGG - tig0019471:7558-7577 Msa1374210:intron 60.0%
GCTGCTCCAAACACCAGGGA+TGG - tig0019471:7562-7581 Msa1374210:intron 60.0%
TCTCGACGACGTCAACCCTG+TGG - tig0019471:7657-7676 Msa1374210:intron 60.0%
CTCGACGACGTCAACCCTGT+GGG - tig0019471:7658-7677 Msa1374210:intron 60.0%
GACGTCAACCCTGTGGGACT+TGG - tig0019471:7664-7683 Msa1374210:intron 60.0%
! CAATTGGCTCAGTTGCGCGC+TGG - tig0019471:8512-8531 Msa1374210:intron 60.0%
CTAATGGAGCCACTGCCTCG+AGG + tig0019471:9564-9583 None:intergenic 60.0%
AGAAAAAAGAGGGGGGGGGG+GGG + tig0019471:9987-10006 None:intergenic 60.0%
CAGAAAAAAGAGGGGGGGGG+GGG + tig0019471:9988-10007 None:intergenic 60.0%
GCAGAAAAAAGAGGGGGGGG+GGG + tig0019471:9989-10008 None:intergenic 60.0%
CGCAGAAAAAAGAGGGGGGG+GGG + tig0019471:9990-10009 None:intergenic 60.0%
GCGCAGAAAAAAGAGGGGGG+GGG + tig0019471:9991-10010 None:intergenic 60.0%
! AGAACTTGCTCCCGCCTGGA+AGG + tig0019471:11191-11210 None:intergenic 60.0%
AGTTCGTCCGGGTCCATTGC+AGG - tig0019471:11376-11395 Msa1374210:intron 60.0%
!! TCCGGGACGGAGGGAGTATT+TGG + tig0019471:11672-11691 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG + tig0019471:11682-11701 None:intergenic 60.0%
GCTCAGATATACCGGGACGG+AGG - tig0019471:11880-11899 Msa1374210:intron 60.0%
ATTAGAGCACGCTGCCCACC+AGG + tig0019471:11985-12004 None:intergenic 60.0%
TCTCCAGGCCAGGGATGTTC+AGG + tig0019471:12582-12601 None:intergenic 60.0%
! GGAGGTATGTTCTCCAGGCC+AGG + tig0019471:12592-12611 None:intergenic 60.0%
TGAGCCGGAAGGATAGGGGA+TGG - tig0019471:12910-12929 Msa1374210:CDS 60.0%
AAAAAAGAGGGGGGGGGGGG+GGG + tig0019471:9985-10004 None:intergenic 65.0%
GAAAAAAGAGGGGGGGGGGG+GGG + tig0019471:9986-10005 None:intergenic 65.0%
AAAAAGAGGGGGGGGGGGGG+GGG + tig0019471:9984-10003 None:intergenic 70.0%
AAAAGAGGGGGGGGGGGGGG+GGG + tig0019471:9983-10002 None:intergenic 75.0%
! AAAGAGGGGGGGGGGGGGGG+GGG + tig0019471:9982-10001 None:intergenic 80.0%
! AAGAGGGGGGGGGGGGGGGG+GGG + tig0019471:9981-10000 None:intergenic 85.0%
! AGAGGGGGGGGGGGGGGGGG+GGG + tig0019471:9980-9999 None:intergenic 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + tig0019471:9978-9997 None:intergenic 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG + tig0019471:9979-9998 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
tig0019471 gene 7125 13489 7125 ID=Msa1374210;Name=Msa1374210
tig0019471 mRNA 7125 13489 7125 ID=Msa1374210-mRNA-1;Parent=Msa1374210;Name=Msa1374210-mRNA-1;_AED=0.10;_eAED=0.10;_QI=260|1|1|1|0.91|0.84|13|232|589
tig0019471 exon 7125 7323 7125 ID=Msa1374210-mRNA-1:exon:3802;Parent=Msa1374210-mRNA-1
tig0019471 exon 7998 8102 7998 ID=Msa1374210-mRNA-1:exon:3801;Parent=Msa1374210-mRNA-1
tig0019471 exon 8186 8233 8186 ID=Msa1374210-mRNA-1:exon:3800;Parent=Msa1374210-mRNA-1
tig0019471 exon 8311 8388 8311 ID=Msa1374210-mRNA-1:exon:3799;Parent=Msa1374210-mRNA-1
tig0019471 exon 8582 8638 8582 ID=Msa1374210-mRNA-1:exon:3798;Parent=Msa1374210-mRNA-1
tig0019471 exon 9217 9282 9217 ID=Msa1374210-mRNA-1:exon:3797;Parent=Msa1374210-mRNA-1
tig0019471 exon 9391 9480 9391 ID=Msa1374210-mRNA-1:exon:3796;Parent=Msa1374210-mRNA-1
tig0019471 exon 10444 10524 10444 ID=Msa1374210-mRNA-1:exon:3795;Parent=Msa1374210-mRNA-1
tig0019471 exon 11271 11375 11271 ID=Msa1374210-mRNA-1:exon:3794;Parent=Msa1374210-mRNA-1
tig0019471 exon 11516 11651 11516 ID=Msa1374210-mRNA-1:exon:3793;Parent=Msa1374210-mRNA-1
tig0019471 exon 11736 11811 11736 ID=Msa1374210-mRNA-1:exon:3792;Parent=Msa1374210-mRNA-1
tig0019471 exon 11910 12327 11910 ID=Msa1374210-mRNA-1:exon:3791;Parent=Msa1374210-mRNA-1
tig0019471 exon 12687 13489 12687 ID=Msa1374210-mRNA-1:exon:3790;Parent=Msa1374210-mRNA-1
tig0019471 five_prime_UTR 13230 13489 13230 ID=Msa1374210-mRNA-1:five_prime_utr;Parent=Msa1374210-mRNA-1
tig0019471 CDS 12687 13229 12687 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 11910 12327 11910 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 11736 11811 11736 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 11516 11651 11516 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 11271 11375 11271 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 10444 10524 10444 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 9391 9480 9391 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 9217 9282 9217 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 8582 8638 8582 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 8311 8388 8311 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 8186 8233 8186 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 CDS 8031 8102 8031 ID=Msa1374210-mRNA-1:cds;Parent=Msa1374210-mRNA-1
tig0019471 three_prime_UTR 7998 8030 7998 ID=Msa1374210-mRNA-1:three_prime_utr;Parent=Msa1374210-mRNA-1
tig0019471 three_prime_UTR 7125 7323 7125 ID=Msa1374210-mRNA-1:three_prime_utr;Parent=Msa1374210-mRNA-1
Gene Sequence

>Msa1374210

ATGAGTACCTCACCTTCAGCAACAACAATTGCTGCTGCTGCTGTGTACTCAAAGTATCATAATATTAATACAACACTTTCACTTTCAGGAGCCTCCTCACAAATCAACACTACTTTCCTCTCATACACCAAAAAGCAGCATACCCGCTCCTCTGTACAACGACTGCCTCCTATAGCCGCTGCTCCAAACACCAGGGATGGCAAAGACAGCAAGAACAACACCCAAAACGACGACGACGACAACAACGATGACAAACAATCTGTTTCTCTTAGTCTCGACGACGTCAACCCTGTGGGACTTGGTCGAAGATCGCGGCAGATATTCGATGAGGTTTGGAGAAAATTCTCTGGACTGGGTCAGATCTCTAGGACTATACGTACTGATGATGTGGAGGCACTAGATGCTCTTCTTGTTCGTGAAGGTCCTATGTGTGAGTTTGCCATCCCTGGTGCTCAGAATACTACTGTACTTGTTGTTGGTGCTACTAGCCGTATAGGTCGAATTGTTGTCCGTAAACTCATGCTCAGGGGTTACTCTGTCAAGGCTTTGGTAAGGAAGGCAGATGAAGAGGTGGTAGAGCTGCTTCCAAGGTCAGTAGAGATAGTGATTGGGGATGTTGGTGATCCAAACACAGTCAAGGCTGCTGTAGAAGGCTGCAATAAAATCATATATTGTGCCACTGCCCGCTCAACTATCACTGGTGATCTCTTCAGGGTTGATCAGCAAGGAGTTTATAATCTATCTAAAGCATTTCAGGATCACAACAATCAATTGGCTCAGTTGCGCGCTGGGAAAAGCAGCAAAAGTAAGCTTACAATTGCTAAATTTAAATCTGAATCTTCACTGGATGGATGGGAAGTTCGTCAAGGAACTTACTTCGAAGATGTAGTTACCTCAAAATATGATGGAGGGATGGATGCCAAATTTGAGTTCACTGAGAATGGAGCTGCTGTTTTCTCAGGGTATGTCTTCAATAGAGGTGGCTATGTAGAACTGTCAAAAAAGCTTTCTCTACCTTTGGGTAGTACTCTTGACAGGTATGAGGGCTTGGTTCTCTCTGTTGGCGGCAATGGAAGACCTTATGTATTAATTCTAGAAGCTGGTCCTTCAGGGGATCCAAGTCAGAGTAAATTGTATTTTGCAAGAATTAGTACAAAAGTGGGATTTTGTAGGGTTAGAGTGCCATTTTCATCATTTCGTCCGGTGAAACCAGATCATCCAGTTTTAGACCCTTTTCTTGTACATACATTAACAATACGGTTTGAGCCTAGAAGACAGAGGTCTGATATAGTAAATGCGTCAAAGAACCAGGATTCGAGAAGCTTTCAGCTAATATTGGAATATATAAAAGCCTTGCCTACTGGACAAGAAACCGATTTTGTCTTAGTTTCATGTTCTGGCCTTGGTATTGAGCCTTCCAGGCGGGAGCAAGTTCTTAAAGCCAAGAGGGCAGGTGAAGATTCCTTGAGAAGATCTGGGCTTGGATACACAATAGTTCGTCCGGGTCCATTGCAGGAAGAACCTGGTGGGCAGCGTGCTCTAATATTTGATCAAGGAGACAGAATATCTCGGGGCATCAGTTGTGCTGATGTGGCCGATATATGTGTGAAGGCACTCCATGATTCAACTGCAAGAAACAAAAGCTTTGATGTATGTTACGAGTACGTTGCTGAGGATGGGAATGAGCTTTATGAGCTGGTTGCCCACTTGCCGGACAAAGCAAATAACTATCTGACACCAGCTCTCTCTGTCTTGGAGAAGAATACCTGA

Protein sequence

>Msa1374210

MSTSPSATTIAAAAVYSKYHNINTTLSLSGASSQINTTFLSYTKKQHTRSSVQRLPPIAAAPNTRDGKDSKNNTQNDDDDNNDDKQSVSLSLDDVNPVGLGRRSRQIFDEVWRKFSGLGQISRTIRTDDVEALDALLVREGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYSVKALVRKADEEVVELLPRSVEIVIGDVGDPNTVKAAVEGCNKIIYCATARSTITGDLFRVDQQGVYNLSKAFQDHNNQLAQLRAGKSSKSKLTIAKFKSESSLDGWEVRQGTYFEDVVTSKYDGGMDAKFEFTENGAAVFSGYVFNRGGYVELSKKLSLPLGSTLDRYEGLVLSVGGNGRPYVLILEAGPSGDPSQSKLYFARISTKVGFCRVRVPFSSFRPVKPDHPVLDPFLVHTLTIRFEPRRQRSDIVNASKNQDSRSFQLILEYIKALPTGQETDFVLVSCSGLGIEPSRREQVLKAKRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGDRISRGISCADVADICVKALHDSTARNKSFDVCYEYVAEDGNELYELVAHLPDKANNYLTPALSVLEKNT*