AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0228360


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0228360 MtrunA17_Chr4g0000041 94.098 593 13 3 1 575 1 589 0.0 1126
Msa0228360 MtrunA17_Chr8g0379501 51.351 74 35 1 464 537 81 153 7.28e-14 70.9
Msa0228360 MtrunA17_Chr8g0379511 28.028 289 170 13 142 403 126 403 1.94e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0228360 AT1G16720.1 83.034 501 85 0 75 575 98 598 0.0 871
Msa0228360 AT1G16720.2 77.903 534 85 1 75 575 98 631 0.0 854
Msa0228360 AT1G16720.3 82.289 463 82 0 75 537 98 560 0.0 796
Msa0228360 AT4G18810.2 29.694 458 255 23 126 537 113 549 2.47e-25 110
Msa0228360 AT4G18810.1 28.884 457 260 19 126 537 113 549 2.84e-25 110

Find 157 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACAACACTTTCACTTTC+AGG 0.166841 2_1:-80295493 Msa0228360:CDS
TAATCTATCTAAAGCATTTC+AGG 0.177804 2_1:-80294467 Msa0228360:CDS
ATTCTCAGTGAACTCAAATT+TGG 0.188350 2_1:+80294282 None:intergenic
TTTGTCTTAGTTTCATGTTC+TGG 0.244048 2_1:-80291790 Msa0228360:CDS
TTGGACATTACCTGTCTTCT+AGG 0.270556 2_1:+80293613 None:intergenic
CTATCACTGGTGATCTCTTC+AGG 0.274699 2_1:-80294510 Msa0228360:CDS
GAGAAGCTTTCAGCTAATAT+TGG 0.279017 2_1:-80292814 Msa0228360:CDS
ATTCTAGAAGCTGGTCCTTC+AGG 0.280246 2_1:-80293930 Msa0228360:CDS
GCCTTGGTATTGAGCCTTCC+AGG 0.286621 2_1:-80291768 Msa0228360:CDS
ACAGCAGCCTTGACTGTGTT+TGG 0.292381 2_1:+80294577 None:intergenic
ACCGGACGAAATGATGAAAA+TGG 0.315241 2_1:+80293697 None:intergenic
AGATATTACAGGGGACTAAT+TGG 0.315769 2_1:-80289557 Msa0228360:three_prime_UTR
AAAGAAAATGTAGATATTAC+AGG 0.331116 2_1:-80289568 Msa0228360:three_prime_UTR
AACCCCTGAGCATGAGTTTA+CGG 0.337945 2_1:+80295051 None:intergenic
TTAGTTTCATGTTCTGGCCT+TGG 0.337954 2_1:-80291784 Msa0228360:CDS
GAAGATTCCTTGAGAAGATC+TGG 0.343993 2_1:-80291603 Msa0228360:CDS
TTGTTGTCGTCGTCGTCGTT+TGG 0.362759 2_1:+80295338 None:intergenic
TCTCCAGGCCAGGGATGTTC+AGG 0.370394 2_1:+80290362 None:intergenic
TGCAAGAATTAGTACAAAAG+TGG 0.371055 2_1:-80293880 Msa0228360:CDS
GTTCTCTCTGTTGGCGGCAA+TGG 0.376433 2_1:-80293969 Msa0228360:CDS
AGTTCGTCCGGGTCCATTGC+AGG 0.386123 2_1:-80291565 Msa0228360:intron
GTTAATGTATGTACAAGAAA+AGG 0.389677 2_1:+80293649 None:intergenic
AAATTTGAGTTCACTGAGAA+TGG 0.390202 2_1:-80294280 Msa0228360:CDS
TAATCAGGTTGCCCACTTGC+CGG 0.392057 2_1:-80290436 Msa0228360:intron
TGTTGTCGTCGTCGTCGTTT+GGG 0.398593 2_1:+80295339 None:intergenic
ACAAGAAAAGGGTCTAAAAC+TGG 0.404655 2_1:+80293661 None:intergenic
GGACAACAATTCGACCTATA+CGG 0.404869 2_1:+80295072 None:intergenic
TTCTAGAAGCTGGTCCTTCA+GGG 0.411008 2_1:-80293929 Msa0228360:CDS
GGGTCTAAAACTGGATGATC+TGG 0.417511 2_1:+80293670 None:intergenic
TCATGATAGGTATGAGGGCT+TGG 0.424833 2_1:-80293991 Msa0228360:intron
AATACTACTGTACTTGTTGT+TGG 0.426072 2_1:-80295104 Msa0228360:CDS
CTGAATCTTCACTGGATGGA+TGG 0.426462 2_1:-80294369 Msa0228360:CDS
TTGGAGAAAATTCTCTGGAC+TGG 0.426876 2_1:-80295228 Msa0228360:CDS
CTGGACTGGGTCAGATCTCT+AGG 0.427807 2_1:-80295214 Msa0228360:CDS
GTTGGTGCTACTAGCCGTAT+AGG 0.435219 2_1:-80295086 Msa0228360:CDS
TGTTTCTTGCAGTTGAATCA+TGG 0.435790 2_1:+80290671 None:intergenic
GAGTGCCTTCACACATATAT+CGG 0.436679 2_1:+80290693 None:intergenic
TGGATACACAATAGTTCGTC+CGG 0.437257 2_1:-80291577 Msa0228360:CDS
AGATAGTTATTTGCTTTGTC+CGG 0.438211 2_1:+80290417 None:intergenic
ATTTAAATCTGAATCTTCAC+TGG 0.438895 2_1:-80294377 Msa0228360:CDS
TTAGGGTATGTCTTCAATAG+AGG 0.440898 2_1:-80294146 Msa0228360:intron
TTGTCCGTAAACTCATGCTC+AGG 0.442258 2_1:-80295055 Msa0228360:CDS
GGCAGATATTCGATGAGGTT+TGG 0.442586 2_1:-80295247 Msa0228360:CDS
TCAGGATCACAACAATCAAT+TGG 0.444558 2_1:-80294449 Msa0228360:CDS
GCTGAAAGCTTCTCGAATCC+TGG 0.446728 2_1:+80292823 None:intergenic
GAGATAGTGATTGGGGATGT+TGG 0.447831 2_1:-80294604 Msa0228360:CDS
AACAAATGAACCTACCCTCT+TGG 0.448430 2_1:+80291726 None:intergenic
AATTGGCTCAGTTGCGCGCT+GGG 0.448540 2_1:-80294432 Msa0228360:CDS
ACAGTCAAGGCTGCTGTAGA+AGG 0.459186 2_1:-80294571 Msa0228360:CDS
GAGGTTTGGAGAAAATTCTC+TGG 0.460565 2_1:-80295233 Msa0228360:CDS
TCCTTGAGAAGATCTGGGCT+TGG 0.460859 2_1:-80291597 Msa0228360:CDS
ATGTGTGAGTTTGCCATCCC+TGG 0.462288 2_1:-80295134 Msa0228360:CDS
AGGTCAGTAGAGATAGTGAT+TGG 0.469344 2_1:-80294613 Msa0228360:CDS
TTGTACATACATTAACAATA+CGG 0.470364 2_1:-80293642 Msa0228360:CDS
TTGTAGGAGGTATGTTCTCC+AGG 0.472948 2_1:+80290347 None:intergenic
AAATACAATTTACTCTGACT+TGG 0.474303 2_1:+80293903 None:intergenic
GGAGGTATGTTCTCCAGGCC+AGG 0.475726 2_1:+80290352 None:intergenic
TTTAAGAACTTGCTCCCGCC+TGG 0.479129 2_1:+80291750 None:intergenic
CATCTGTCATGATAGGTATG+AGG 0.480362 2_1:-80293997 Msa0228360:intron
GACGTCAACCCTGTGGGACT+TGG 0.481549 2_1:-80295281 Msa0228360:CDS
GACACCAGCTCTCTCTGTCT+TGG 0.482972 2_1:-80290394 Msa0228360:CDS
ACATGAAACTAAGACAAAAT+CGG 0.484449 2_1:+80291795 None:intergenic
TATGTATTAATTCTAGAAGC+TGG 0.484676 2_1:-80293939 Msa0228360:CDS
ATTAGAGCACGCTGCCCACC+AGG 0.489698 2_1:+80290959 None:intergenic
TGGAGAAAATTCTCTGGACT+GGG 0.490104 2_1:-80295227 Msa0228360:CDS
CAATTGGCTCAGTTGCGCGC+TGG 0.490703 2_1:-80294433 Msa0228360:CDS
TACGAGTACGTTGCTGAGGA+TGG 0.493701 2_1:-80290554 Msa0228360:CDS
GAGGGCTTGGTTCTCTCTGT+TGG 0.494157 2_1:-80293978 Msa0228360:CDS
ATACCTGAACATCCCTGGCC+TGG 0.496705 2_1:-80290365 Msa0228360:exon
TGAATCTTCACTGGATGGAT+GGG 0.497784 2_1:-80294368 Msa0228360:CDS
GGTCAGTAGAGATAGTGATT+GGG 0.500030 2_1:-80294612 Msa0228360:CDS
GCAAGAATTAGTACAAAAGT+GGG 0.501200 2_1:-80293879 Msa0228360:CDS
TTAATGTATGTACAAGAAAA+GGG 0.503140 2_1:+80293650 None:intergenic
TGGTATTGAGCCTTCCAGGC+GGG 0.505603 2_1:-80291764 Msa0228360:CDS
ATCACCAGTGATAGTTGAGC+GGG 0.506989 2_1:+80294519 None:intergenic
AAATCATAGTAATTACACTT+TGG 0.508911 2_1:-80289474 Msa0228360:three_prime_UTR
ATCACTATCTCTACTGACCT+TGG 0.510201 2_1:+80294616 None:intergenic
GCTTCTAGAATTAATACATA+AGG 0.513253 2_1:+80293942 None:intergenic
CTGCAATGAAGGCTTTGGTA+AGG 0.516682 2_1:-80294669 Msa0228360:intron
CTTTGGGTAGTACTCTTGAC+AGG 0.517774 2_1:-80294088 Msa0228360:intron
TATCACTGGTGATCTCTTCA+GGG 0.525143 2_1:-80294509 Msa0228360:CDS
CAGTCGTTGTACAGAGGAGC+GGG 0.528087 2_1:+80295417 None:intergenic
AAGATTCCTTGAGAAGATCT+GGG 0.529508 2_1:-80291602 Msa0228360:CDS
GATCTTCGACCAAGTCCCAC+AGG 0.531721 2_1:+80295272 None:intergenic
GTAGTTACCTCAAAATATGA+TGG 0.532512 2_1:-80294316 Msa0228360:CDS
AAAAGAAACTGTACCTGCAA+TGG 0.533749 2_1:+80291552 None:intergenic
AACTGTACCTGCAATGGACC+CGG 0.533940 2_1:+80291558 None:intergenic
ATCAAGGAGACAGAATATCT+CGG 0.538498 2_1:-80290931 Msa0228360:CDS
ACTGGATGATCTGGTTTCAC+CGG 0.539360 2_1:+80293679 None:intergenic
TGTCCGTAAACTCATGCTCA+GGG 0.540648 2_1:-80295054 Msa0228360:CDS
ACAGTAGTATTCTGAGCACC+AGG 0.541242 2_1:+80295116 None:intergenic
CTCTGACTTGGATCCCCTGA+AGG 0.545090 2_1:+80293915 None:intergenic
AAGGAAGGCAGATGAAGAGG+TGG 0.546607 2_1:-80294650 Msa0228360:CDS
GTCAGTAGAGATAGTGATTG+GGG 0.546856 2_1:-80294611 Msa0228360:CDS
GAAAGTAGTGTTGATTTGTG+AGG 0.548084 2_1:+80295465 None:intergenic
TATTTGCTTTGTCCGGCAAG+TGG 0.553339 2_1:+80290424 None:intergenic
TGGGAATGAGCTTTATGAGC+TGG 0.553677 2_1:-80290534 Msa0228360:intron
AGTGATAGTTGAGCGGGCAG+TGG 0.554082 2_1:+80294525 None:intergenic
GGCTTGGTTCTCTCTGTTGG+CGG 0.554436 2_1:-80293975 Msa0228360:CDS
AGGTGGTAGAGCTGCTTCCA+AGG 0.555546 2_1:-80294633 Msa0228360:CDS
GACTATACGTACTGATGATG+TGG 0.555620 2_1:-80295192 Msa0228360:CDS
AAATCTGAATCTTCACTGGA+TGG 0.556032 2_1:-80294373 Msa0228360:CDS
ACGAGTACGTTGCTGAGGAT+GGG 0.556225 2_1:-80290553 Msa0228360:CDS
AGAACTTGCTCCCGCCTGGA+AGG 0.556592 2_1:+80291754 None:intergenic
TCAAGGAGACAGAATATCTC+GGG 0.556593 2_1:-80290930 Msa0228360:intron
GAAGAATACCTGAACATCCC+TGG 0.556642 2_1:-80290370 Msa0228360:exon
ATCTGTCATGATAGGTATGA+GGG 0.558247 2_1:-80293996 Msa0228360:intron
AGTAAATGCGTCAAAGAACC+AGG 0.559462 2_1:-80292841 Msa0228360:CDS
GACGGAACCTTACTTGTAGG+AGG 0.563579 2_1:+80290334 None:intergenic
GCTCAGGGGTTACTCTGTCA+AGG 0.566034 2_1:-80295039 Msa0228360:intron
ACGGTTTGAGCCTAGAAGAC+AGG 0.567499 2_1:-80293623 Msa0228360:intron
GATGCTCTTCTTGTTCGTGA+AGG 0.569216 2_1:-80295161 Msa0228360:CDS
ACTGCCCGCTCAACTATCAC+TGG 0.569404 2_1:-80294523 Msa0228360:CDS
CTCAAAATATGATGGAGGGA+TGG 0.571128 2_1:-80294308 Msa0228360:CDS
TTCTCCAAGACAGAGAGAGC+TGG 0.571260 2_1:+80290390 None:intergenic
GCCTGGAAGGCTCAATACCA+AGG 0.575877 2_1:+80291767 None:intergenic
AGCAAGTTCTTAAAGCCAAG+AGG 0.576792 2_1:-80291741 Msa0228360:CDS
CGTGCTCTAATATTTGATCA+AGG 0.579384 2_1:-80290947 Msa0228360:CDS
AAGAAAATGTAGATATTACA+GGG 0.581726 2_1:-80289567 Msa0228360:three_prime_UTR
ATTTGCTTTGTCCGGCAAGT+GGG 0.589515 2_1:+80290425 None:intergenic
GGGTATGTCTTCAATAGAGG+TGG 0.590645 2_1:-80294143 Msa0228360:CDS
GTTACCTCAAAATATGATGG+AGG 0.594354 2_1:-80294313 Msa0228360:CDS
GGTAAGGAAGGCAGATGAAG+AGG 0.596194 2_1:-80294653 Msa0228360:CDS
AATGAAGGCTTTGGTAAGGA+AGG 0.596671 2_1:-80294665 Msa0228360:intron
GGGATGGCAAACTCACACAT+AGG 0.598239 2_1:+80295137 None:intergenic
GAGGTATGTTCTCCAGGCCA+GGG 0.602858 2_1:+80290353 None:intergenic
GCAAGTTCTTAAAGCCAAGA+GGG 0.604143 2_1:-80291740 Msa0228360:intron
AGTAGTGTTGATTTGTGAGG+AGG 0.608720 2_1:+80295468 None:intergenic
GGATACACAATAGTTCGTCC+GGG 0.610507 2_1:-80291576 Msa0228360:CDS
GCAGCAATTGTTGTTGCTGA+AGG 0.611171 2_1:+80295547 None:intergenic
GGGCATCAGTTGTGCTGATG+TGG 0.616066 2_1:-80290716 Msa0228360:CDS
TGGGACTTGGTCGAAGATCG+CGG 0.620126 2_1:-80295268 Msa0228360:CDS
CTCTTCAGGGTTGATCAGCA+AGG 0.623616 2_1:-80294496 Msa0228360:CDS
AGTATTCTGAGCACCAGGGA+TGG 0.632012 2_1:+80295121 None:intergenic
TATGAAAACACCTACAGGCA+AGG 0.632269 2_1:+80292779 None:intergenic
TTACCTCAAAATATGATGGA+GGG 0.640633 2_1:-80294312 Msa0228360:CDS
TCCAAGCCCAGATCTTCTCA+AGG 0.642912 2_1:+80291596 None:intergenic
CTCGACGACGTCAACCCTGT+GGG 0.648664 2_1:-80295287 Msa0228360:CDS
TCTAGAAGCTGGTCCTTCAG+GGG 0.650111 2_1:-80293928 Msa0228360:CDS
ATCTTCGACCAAGTCCCACA+GGG 0.651382 2_1:+80295273 None:intergenic
TGGTGATCCAAACACAGTCA+AGG 0.654891 2_1:-80294584 Msa0228360:CDS
ATGTTACGAGTACGTTGCTG+AGG 0.656759 2_1:-80290558 Msa0228360:CDS
GATCACCAGTGATAGTTGAG+CGG 0.662278 2_1:+80294518 None:intergenic
GCAGTCGTTGTACAGAGGAG+CGG 0.662658 2_1:+80295416 None:intergenic
TCTCGACGACGTCAACCCTG+TGG 0.668504 2_1:-80295288 Msa0228360:CDS
GCTGACAGGAAGAACCTGGT+GGG 0.669326 2_1:-80290973 Msa0228360:intron
TATACGTACTGATGATGTGG+AGG 0.669817 2_1:-80295189 Msa0228360:CDS
TTGGTATTGAGCCTTCCAGG+CGG 0.672929 2_1:-80291765 Msa0228360:CDS
TGCTGACAGGAAGAACCTGG+TGG 0.676407 2_1:-80290974 Msa0228360:intron
AATTGTTGTTGCTGAAGGTG+AGG 0.678588 2_1:+80295552 None:intergenic
CTGTCAAGAGTACTACCCAA+AGG 0.683886 2_1:+80294089 None:intergenic
GATGGATGGGAAGTTCGTCA+AGG 0.684473 2_1:-80294355 Msa0228360:CDS
ATCGCGGCAGATATTCGATG+AGG 0.685359 2_1:-80295252 Msa0228360:CDS
GTCCGTAAACTCATGCTCAG+GGG 0.688942 2_1:-80295053 Msa0228360:CDS
CAGTAGTATTCTGAGCACCA+GGG 0.701255 2_1:+80295117 None:intergenic
TGTGGCCGATATATGTGTGA+AGG 0.705155 2_1:-80290698 Msa0228360:CDS
AGAAAATGTAGATATTACAG+GGG 0.712636 2_1:-80289566 Msa0228360:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAAAATAAAATATA+GGG + chr2_1:80290869-80290888 None:intergenic 0.0%
!! TAAAATTAAAAATAAAATAT+AGG + chr2_1:80290870-80290889 None:intergenic 0.0%
!!! TATATTTTATTTTTAATTTT+AGG - chr2_1:80290869-80290888 Msa0228360:intron 0.0%
!!! ATATTTTATTTTTAATTTTA+GGG - chr2_1:80290870-80290889 Msa0228360:intron 0.0%
!! TATGTATGTATAAAATAAAA+TGG - chr2_1:80290198-80290217 Msa0228360:intron 10.0%
!! ATTTAATAAATTACATTAGA+AGG - chr2_1:80291564-80291583 Msa0228360:intron 10.0%
!!! ATTATTTATCTTTATTGATT+TGG - chr2_1:80292741-80292760 Msa0228360:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr2_1:80293929-80293948 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + chr2_1:80293930-80293949 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292057-80292076 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292057-80292076 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292057-80292076 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292057-80292076 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292057-80292076 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292057-80292076 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292057-80292076 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292057-80292076 None:intergenic 100.0%
!! AATATCCAATAACATAATTA+AGG + chr2_1:80290254-80290273 None:intergenic 15.0%
!! ACAAATTTAAGTAAAAGATT+CGG + chr2_1:80291459-80291478 None:intergenic 15.0%
!!! TTTTTATCTTTTATACTATG+AGG + chr2_1:80291716-80291735 None:intergenic 15.0%
!!! AGATAAAAAAATGTTGTTTT+AGG - chr2_1:80291727-80291746 Msa0228360:intron 15.0%
!!! TTTTCTTATAATAAAATGCA+AGG - chr2_1:80292474-80292493 Msa0228360:intron 15.0%
!!! AGTTTTCAATTTAAAATACT+TGG - chr2_1:80292794-80292813 Msa0228360:CDS 15.0%
!!! GTTTTCAATTTAAAATACTT+GGG - chr2_1:80292795-80292814 Msa0228360:CDS 15.0%
!! TTTAAATACATTCACAAAAT+TGG + chr2_1:80293611-80293630 None:intergenic 15.0%
!! AATTAGAGTTATATTGTATT+GGG + chr2_1:80293864-80293883 None:intergenic 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + chr2_1:80293865-80293884 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr2_1:80293928-80293947 None:intergenic 15.0%
!!! TTCAATTTTTCAAAAATCAA+AGG + chr2_1:80294839-80294858 None:intergenic 15.0%
!! ATCAATAAATAAATTGCATT+AGG - chr2_1:80294878-80294897 Msa0228360:intron 15.0%
!! ACATATATCAAAATATAATG+TGG - chr2_1:80295167-80295186 Msa0228360:CDS 15.0%
!! TTAAGTATTCATTTAAATTG+TGG - chr2_1:80295322-80295341 Msa0228360:CDS 15.0%
!!! AATATCTACATTTTCTTTTT+TGG + chr2_1:80295463-80295482 None:intergenic 15.0%
!!! ATAAAATGGTTAATTTTCCT+TGG - chr2_1:80290212-80290231 Msa0228360:intron 20.0%
!! ATTCACCTTAATTATGTTAT+TGG - chr2_1:80290246-80290265 Msa0228360:intron 20.0%
!! AATAATCTTGCAAAAAATGT+TGG + chr2_1:80290822-80290841 None:intergenic 20.0%
!! TTAATGTATGTACAAGAAAA+GGG + chr2_1:80291386-80291405 None:intergenic 20.0%
!! TTGTACATACATTAACAATA+CGG - chr2_1:80291391-80291410 Msa0228360:intron 20.0%
!!! TTAAATTTGTCTTCTGTTTT+TGG - chr2_1:80291469-80291488 Msa0228360:intron 20.0%
!! ACTTGTAAGGAAAAATAAAA+GGG + chr2_1:80291826-80291845 None:intergenic 20.0%
!! TACTTGTAAGGAAAAATAAA+AGG + chr2_1:80291827-80291846 None:intergenic 20.0%
!! TTCTATAATTCTGTTACTAA+TGG + chr2_1:80291881-80291900 None:intergenic 20.0%
!!! AGGTATATTGATTGATATTT+TGG - chr2_1:80292927-80292946 Msa0228360:intron 20.0%
!! TGCATTGGATTAATTATTAA+TGG - chr2_1:80293535-80293554 Msa0228360:intron 20.0%
!! AATTATTAATGGCTTAAGAT+TGG - chr2_1:80293546-80293565 Msa0228360:intron 20.0%
!!! GACACTTTTTTTTAGTAAAT+GGG + chr2_1:80293795-80293814 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr2_1:80293832-80293851 None:intergenic 20.0%
!! AAAGTGGAATATATTGAATT+GGG + chr2_1:80293905-80293924 None:intergenic 20.0%
!! CAATAATCAAAATTGTTTAC+GGG + chr2_1:80294255-80294274 None:intergenic 20.0%
!! CCAATAATCAAAATTGTTTA+CGG + chr2_1:80294256-80294275 None:intergenic 20.0%
!!! ATTTTGATTATTGGAATAAC+TGG - chr2_1:80294262-80294281 Msa0228360:intron 20.0%
!!! TGAAAATGTTAAGTTTCTTT+TGG + chr2_1:80294442-80294461 None:intergenic 20.0%
!!! ATTTTTCTGTATATATTCAC+AGG - chr2_1:80294767-80294786 Msa0228360:intron 20.0%
!! CAAATTGAATGGAAATAATA+CGG + chr2_1:80295251-80295270 None:intergenic 20.0%
!! AAAGAAAATGTAGATATTAC+AGG - chr2_1:80295465-80295484 Msa0228360:CDS 20.0%
!! AAGAAAATGTAGATATTACA+GGG - chr2_1:80295466-80295485 Msa0228360:CDS 20.0%
!! AGATTGATTTAGAAACTAAC+TGG + chr2_1:80290083-80290102 None:intergenic 25.0%
!! AGTTAGTTTCTAAATCAATC+TGG - chr2_1:80290082-80290101 Msa0228360:intron 25.0%
!! GTTAGTTTCTAAATCAATCT+GGG - chr2_1:80290083-80290102 Msa0228360:intron 25.0%
! TTAGTTTCTAAATCAATCTG+GGG - chr2_1:80290084-80290103 Msa0228360:intron 25.0%
!! TTTGATTGGCTAAAAAACAT+GGG + chr2_1:80290134-80290153 None:intergenic 25.0%
! GAATGTGAAATTGCTAAATA+TGG + chr2_1:80290162-80290181 None:intergenic 25.0%
! TCAAATCATTTCTGACAAAT+CGG + chr2_1:80290299-80290318 None:intergenic 25.0%
!! TAATCTATCTAAAGCATTTC+AGG - chr2_1:80290566-80290585 Msa0228360:intron 25.0%
! ATTTAAATCTGAATCTTCAC+TGG - chr2_1:80290656-80290675 Msa0228360:intron 25.0%
!!! GCTTCTAGAATTAATACATA+AGG + chr2_1:80291094-80291113 None:intergenic 25.0%
!! TATGTATTAATTCTAGAAGC+TGG - chr2_1:80291094-80291113 Msa0228360:intron 25.0%
! AAATACAATTTACTCTGACT+TGG + chr2_1:80291133-80291152 None:intergenic 25.0%
!! AAGAATCATTCTCATTTTAG+TGG - chr2_1:80291189-80291208 Msa0228360:intron 25.0%
! GTTAATGTATGTACAAGAAA+AGG + chr2_1:80291387-80291406 None:intergenic 25.0%
! TAAAAGATTCGGAAACAATA+AGG + chr2_1:80291448-80291467 None:intergenic 25.0%
! AAATAGTATTTAATCACCAC+TGG - chr2_1:80291592-80291611 Msa0228360:CDS 25.0%
! TTGTAAGGAAAAATAAAAGG+GGG + chr2_1:80291824-80291843 None:intergenic 25.0%
! CTTGTAAGGAAAAATAAAAG+GGG + chr2_1:80291825-80291844 None:intergenic 25.0%
! TAACAAAAGCAAGTAAATAG+GGG + chr2_1:80292029-80292048 None:intergenic 25.0%
! GTAACAAAAGCAAGTAAATA+GGG + chr2_1:80292030-80292049 None:intergenic 25.0%
! TGTAACAAAAGCAAGTAAAT+AGG + chr2_1:80292031-80292050 None:intergenic 25.0%
!!! TTTCGTATGACTTTTTTCTT+TGG - chr2_1:80292696-80292715 Msa0228360:intron 25.0%
! TTAAATTGAAAACTATCAGC+AGG + chr2_1:80292788-80292807 None:intergenic 25.0%
! TTATTGACACTCTTTCATTT+AGG - chr2_1:80292907-80292926 Msa0228360:intron 25.0%
!!! TATTTTGGAGAAAATCATGA+AGG - chr2_1:80292942-80292961 Msa0228360:intron 25.0%
!!! ATTTTGGAGAAAATCATGAA+GGG - chr2_1:80292943-80292962 Msa0228360:intron 25.0%
! ACATGAAACTAAGACAAAAT+CGG + chr2_1:80293241-80293260 None:intergenic 25.0%
!!! ATGTTCCTTTTTGTTATGTT+TGG - chr2_1:80293377-80293396 Msa0228360:intron 25.0%
! CATTCAAAAACATATTCTAC+CGG + chr2_1:80293515-80293534 None:intergenic 25.0%
!!! ATATGTTTTTGAATGTGCAT+TGG - chr2_1:80293520-80293539 Msa0228360:intron 25.0%
!! TAATATTGAGTGGATTTAGA+GGG + chr2_1:80293685-80293704 None:intergenic 25.0%
! TAAATCCACTCAATATTAGA+GGG - chr2_1:80293687-80293706 Msa0228360:CDS 25.0%
!!! GGACACTTTTTTTTAGTAAA+TGG + chr2_1:80293796-80293815 None:intergenic 25.0%
! GAAAGTGGAATATATTGAAT+TGG + chr2_1:80293906-80293925 None:intergenic 25.0%
!!! TTCTTGTTTTTAGGTTTCTT+CGG - chr2_1:80294195-80294214 Msa0228360:intron 25.0%
!!! CCGTAAACAATTTTGATTAT+TGG - chr2_1:80294253-80294272 Msa0228360:intron 25.0%
! TGCCAAATGTCATAATTTAT+AGG - chr2_1:80294296-80294315 Msa0228360:CDS 25.0%
! GCCAAATGTCATAATTTATA+GGG - chr2_1:80294297-80294316 Msa0228360:CDS 25.0%
!!! GATTATTTTTGTGTCTAATC+AGG - chr2_1:80294582-80294601 Msa0228360:CDS 25.0%
!! AATTTAACTGTGCAGATTTT+AGG + chr2_1:80294796-80294815 None:intergenic 25.0%
!! AGTGTAAAAATACCGAATTT+TGG - chr2_1:80294929-80294948 Msa0228360:intron 25.0%
!! TGTTTCTCTAAAAATACCTT+TGG - chr2_1:80294954-80294973 Msa0228360:intron 25.0%
! AGTAGTATACACAAATTGAA+TGG + chr2_1:80295262-80295281 None:intergenic 25.0%
! AGTATTCATTTAAATTGTGG+TGG - chr2_1:80295325-80295344 Msa0228360:CDS 25.0%
! AGAAAATGTAGATATTACAG+GGG - chr2_1:80295467-80295486 Msa0228360:CDS 25.0%
AATACAACACTTTCACTTTC+AGG - chr2_1:80289540-80289559 Msa0228360:three_prime_UTR 30.0%
!! AATACTACTGTACTTGTTGT+TGG - chr2_1:80289929-80289948 Msa0228360:intron 30.0%
AACTAACTGGTCATCAATTA+TGG + chr2_1:80290070-80290089 None:intergenic 30.0%
! GTTTGATTGGCTAAAAAACA+TGG + chr2_1:80290135-80290154 None:intergenic 30.0%
! TAAATATGGTGGTGTTTGAT+TGG + chr2_1:80290148-80290167 None:intergenic 30.0%
TGTGAAATTGCTAAATATGG+TGG + chr2_1:80290159-80290178 None:intergenic 30.0%
GACAGTTTCAAAACATAAAC+TGG - chr2_1:80290317-80290336 Msa0228360:intron 30.0%
!! ATCAACTTTTTCTGCAATGA+AGG - chr2_1:80290353-80290372 Msa0228360:three_prime_UTR 30.0%
GTAGTTACCTCAAAATATGA+TGG - chr2_1:80290717-80290736 Msa0228360:CDS 30.0%
! TTACCTCAAAATATGATGGA+GGG - chr2_1:80290721-80290740 Msa0228360:intron 30.0%
ATTCTCAGTGAACTCAAATT+TGG + chr2_1:80290754-80290773 None:intergenic 30.0%
! AAATTTGAGTTCACTGAGAA+TGG - chr2_1:80290753-80290772 Msa0228360:intron 30.0%
AAAAAAGCTTTCTCTACCTT+TGG - chr2_1:80290928-80290947 Msa0228360:intron 30.0%
AAAAAGCTTTCTCTACCTTT+GGG - chr2_1:80290929-80290948 Msa0228360:intron 30.0%
TGCAAGAATTAGTACAAAAG+TGG - chr2_1:80291153-80291172 Msa0228360:intron 30.0%
GCAAGAATTAGTACAAAAGT+GGG - chr2_1:80291154-80291173 Msa0228360:intron 30.0%
! TACAAAAGTGGGATTTTGTA+GGG - chr2_1:80291165-80291184 Msa0228360:intron 30.0%
ATTCGGAAACAATAAGGTAT+TGG + chr2_1:80291442-80291461 None:intergenic 30.0%
AAAGCCAGTTATTGAACTAA+TGG + chr2_1:80291669-80291688 None:intergenic 30.0%
!!! ATGTTGTTTTAGGACATTCA+AGG - chr2_1:80291737-80291756 Msa0228360:intron 30.0%
TAAAAGTTGTTACTAGACAG+AGG + chr2_1:80291779-80291798 None:intergenic 30.0%
TGTAAGGAAAAATAAAAGGG+GGG + chr2_1:80291823-80291842 None:intergenic 30.0%
TTAGAAACCAAGCAATAGTT+AGG - chr2_1:80291984-80292003 Msa0228360:intron 30.0%
AACAAAAGCAAGTAAATAGG+GGG + chr2_1:80292028-80292047 None:intergenic 30.0%
! TCTGAAACAAGAGTGAATAT+AGG + chr2_1:80292162-80292181 None:intergenic 30.0%
! TATATTCACTCTTGTTTCAG+AGG - chr2_1:80292161-80292180 Msa0228360:intron 30.0%
AAATGTATGAAAACACCTAC+AGG + chr2_1:80292262-80292281 None:intergenic 30.0%
ATATGCTTGTCTAATGTTCA+TGG - chr2_1:80292319-80292338 Msa0228360:intron 30.0%
TTTCTATCTTCTTGAAGATG+TGG - chr2_1:80292569-80292588 Msa0228360:intron 30.0%
GAGTTGAAGTTTATAAGACA+TGG + chr2_1:80292613-80292632 None:intergenic 30.0%
ATGTAACATAACAGCATCAA+AGG + chr2_1:80292653-80292672 None:intergenic 30.0%
! CAATTTAAAATACTTGGGTC+TGG - chr2_1:80292800-80292819 Msa0228360:CDS 30.0%
GTGTCAATAAGTGATTATTG+CGG + chr2_1:80292897-80292916 None:intergenic 30.0%
GAAAAGAAGAATGCATAACT+AGG - chr2_1:80293113-80293132 Msa0228360:intron 30.0%
CAATAGAATATACATCTTCC+AGG + chr2_1:80293141-80293160 None:intergenic 30.0%
TCACATGCAAAACTTACATT+AGG + chr2_1:80293194-80293213 None:intergenic 30.0%
TTTGTCTTAGTTTCATGTTC+TGG - chr2_1:80293243-80293262 Msa0228360:intron 30.0%
! CTAATATTGAGTGGATTTAG+AGG + chr2_1:80293686-80293705 None:intergenic 30.0%
CTAAATCCACTCAATATTAG+AGG - chr2_1:80293686-80293705 Msa0228360:CDS 30.0%
AAATCCACTCAATATTAGAG+GGG - chr2_1:80293688-80293707 Msa0228360:CDS 30.0%
! AGTATTTGGTTTAGGGTATA+TGG + chr2_1:80293750-80293769 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr2_1:80293921-80293940 None:intergenic 30.0%
!!! CATACACGTTTCTTGTTTTT+AGG - chr2_1:80294186-80294205 Msa0228360:intron 30.0%
GCCCTATAAATTATGACATT+TGG + chr2_1:80294301-80294320 None:intergenic 30.0%
TGAATGCAGATTAGATCAAA+AGG + chr2_1:80294554-80294573 None:intergenic 30.0%
! TTTTGATCTAATCTGCATTC+AGG - chr2_1:80294553-80294572 Msa0228360:CDS 30.0%
TTTGATCTAATCTGCATTCA+GGG - chr2_1:80294554-80294573 Msa0228360:CDS 30.0%
AGATAGTTATTTGCTTTGTC+CGG + chr2_1:80294619-80294638 None:intergenic 30.0%
TAGAAGTAGAAGCAATTTGA+CGG + chr2_1:80294720-80294739 None:intergenic 30.0%
TAGAGAAACAAGCCAAAATT+CGG + chr2_1:80294944-80294963 None:intergenic 30.0%
TTGATATATGTATCATCCCT+TGG + chr2_1:80295158-80295177 None:intergenic 30.0%
!! TTGAACATTGACTCATTTAC+AGG - chr2_1:80295361-80295380 Msa0228360:CDS 30.0%
!! GAAAGTAGTGTTGATTTGTG+AGG + chr2_1:80289571-80289590 None:intergenic 35.0%
! ATCAATCTGGGGTACAAAAA+AGG - chr2_1:80290095-80290114 Msa0228360:intron 35.0%
GTGAATTGTCTTCTAAACCA+AGG + chr2_1:80290232-80290251 None:intergenic 35.0%
! TTTTTCTGCAATGAAGGCTT+TGG - chr2_1:80290359-80290378 Msa0228360:three_prime_UTR 35.0%
TCAGGATCACAACAATCAAT+TGG - chr2_1:80290584-80290603 Msa0228360:intron 35.0%
AAATCTGAATCTTCACTGGA+TGG - chr2_1:80290660-80290679 Msa0228360:CDS 35.0%
GTTACCTCAAAATATGATGG+AGG - chr2_1:80290720-80290739 Msa0228360:intron 35.0%
AGGGGTAAAATCAGAATTTC+AGG + chr2_1:80290850-80290869 None:intergenic 35.0%
TTAGGGTATGTCTTCAATAG+AGG - chr2_1:80290887-80290906 Msa0228360:intron 35.0%
ATGAGTTCATCTGTCATGAT+AGG - chr2_1:80291029-80291048 Msa0228360:intron 35.0%
ATCTGTCATGATAGGTATGA+GGG - chr2_1:80291037-80291056 Msa0228360:intron 35.0%
! GTACAAAAGTGGGATTTTGT+AGG - chr2_1:80291164-80291183 Msa0228360:intron 35.0%
!! TTCTCATTTTAGTGGCTCTA+TGG - chr2_1:80291197-80291216 Msa0228360:intron 35.0%
! ACAAGAAAAGGGTCTAAAAC+TGG + chr2_1:80291375-80291394 None:intergenic 35.0%
CTTTCCGAACCTTTGTAATA+GGG - chr2_1:80291690-80291709 Msa0228360:intron 35.0%
GACTCTAAGTGATACTTGTA+AGG + chr2_1:80291839-80291858 None:intergenic 35.0%
! TCTGTTACTAATGGACGTAA+TGG + chr2_1:80291872-80291891 None:intergenic 35.0%
AAGTAAAACAGGTTTGTGGT+GGG + chr2_1:80291941-80291960 None:intergenic 35.0%
TAAGTAAAACAGGTTTGTGG+TGG + chr2_1:80291942-80291961 None:intergenic 35.0%
! ACCACAAACCTGTTTTACTT+AGG - chr2_1:80291941-80291960 Msa0228360:intron 35.0%
TCCTAAGTAAAACAGGTTTG+TGG + chr2_1:80291945-80291964 None:intergenic 35.0%
AGAATGGTCCTAAGTAAAAC+AGG + chr2_1:80291952-80291971 None:intergenic 35.0%
CTTATTGCCTAACTATTGCT+TGG + chr2_1:80291994-80292013 None:intergenic 35.0%
ACAAAAGCAAGTAAATAGGG+GGG + chr2_1:80292027-80292046 None:intergenic 35.0%
GAGAAGCTTTCAGCTAATAT+TGG - chr2_1:80292219-80292238 Msa0228360:intron 35.0%
TATATAAAAGCCTTGCCTGT+AGG - chr2_1:80292244-80292263 Msa0228360:intron 35.0%
AAATGTTCAGAGCGATGATA+AGG - chr2_1:80292431-80292450 Msa0228360:intron 35.0%
AAAATGCAAGGATACCAACA+AGG - chr2_1:80292486-80292505 Msa0228360:intron 35.0%
! GGACAAGCTTTTAGTAAAAC+TGG - chr2_1:80292867-80292886 Msa0228360:intron 35.0%
TCAGATTACTAGAATCAAGC+AGG + chr2_1:80293088-80293107 None:intergenic 35.0%
GGTGACCAAACATAACAAAA+AGG + chr2_1:80293385-80293404 None:intergenic 35.0%
AAGATTCCTTGAGAAGATCT+GGG - chr2_1:80293431-80293450 Msa0228360:intron 35.0%
AAAAGAAACTGTACCTGCAA+TGG + chr2_1:80293484-80293503 None:intergenic 35.0%
GATTTAGAGGGAAAGAAGAT+GGG + chr2_1:80293644-80293663 None:intergenic 35.0%
GATTTAGAGGGAAAGAAGAT+GGG + chr2_1:80293644-80293663 None:intergenic 35.0%
! TTTGGTTTAGGGTATATGGA+GGG + chr2_1:80293746-80293765 None:intergenic 35.0%
! ATTTGGTTTAGGGTATATGG+AGG + chr2_1:80293747-80293766 None:intergenic 35.0%
AGTAAATGGGTCAGATATTC+CGG + chr2_1:80293782-80293801 None:intergenic 35.0%
!! TGAAATGGCTCAGCTATTTT+GGG + chr2_1:80293817-80293836 None:intergenic 35.0%
! TTGAAATGGCTCAGCTATTT+TGG + chr2_1:80293818-80293837 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG - chr2_1:80293950-80293969 Msa0228360:CDS 35.0%
CGTGCTCTAATATTTGATCA+AGG - chr2_1:80294086-80294105 Msa0228360:intron 35.0%
ATCAAGGAGACAGAATATCT+CGG - chr2_1:80294102-80294121 Msa0228360:CDS 35.0%
TCTATTCTTTACTGTCACTG+AGG - chr2_1:80294135-80294154 Msa0228360:CDS 35.0%
TGTATGATAGCAAATGTTGG+GGG + chr2_1:80294172-80294191 None:intergenic 35.0%
GTGTATGATAGCAAATGTTG+GGG + chr2_1:80294173-80294192 None:intergenic 35.0%
CGTGTATGATAGCAAATGTT+GGG + chr2_1:80294174-80294193 None:intergenic 35.0%
ACGTGTATGATAGCAAATGT+TGG + chr2_1:80294175-80294194 None:intergenic 35.0%
TGTTTCTTGCAGTTGAATCA+TGG + chr2_1:80294365-80294384 None:intergenic 35.0%
TTTGATGTGAGTAAACTGCT+TGG - chr2_1:80294390-80294409 Msa0228360:CDS 35.0%
TTCTACATAGCTGCATCAAA+TGG - chr2_1:80294735-80294754 Msa0228360:intron 35.0%
TTTCTTCCAGTTGTTGAAGT+AGG - chr2_1:80295057-80295076 Msa0228360:CDS 35.0%
ATGTTTCCTACTTCAACAAC+TGG + chr2_1:80295066-80295085 None:intergenic 35.0%
TTGACTACGTCAATCTCTTT+AGG - chr2_1:80295085-80295104 Msa0228360:CDS 35.0%
!! TCAATCTCTTTAGGACTGAT+CGG - chr2_1:80295094-80295113 Msa0228360:CDS 35.0%
GTGCAGTCAATAATACTCTA+TGG - chr2_1:80295124-80295143 Msa0228360:CDS 35.0%
ATATGTATCATCCCTTGGTT+GGG + chr2_1:80295153-80295172 None:intergenic 35.0%
TATATGTATCATCCCTTGGT+TGG + chr2_1:80295154-80295173 None:intergenic 35.0%
TAAGAGGGATAAATGGATCA+TGG + chr2_1:80295193-80295212 None:intergenic 35.0%
TTGTGTATACTACTGTCACT+TGG - chr2_1:80295268-80295287 Msa0228360:CDS 35.0%
! CTCATTTACAGGTCTTTTCA+AGG - chr2_1:80295372-80295391 Msa0228360:intron 35.0%
!! TTTACAGGTCTTTTCAAGGA+TGG - chr2_1:80295376-80295395 Msa0228360:intron 35.0%
AGATATTACAGGGGACTAAT+TGG - chr2_1:80295476-80295495 Msa0228360:CDS 35.0%
! AATTGTTGTTGCTGAAGGTG+AGG + chr2_1:80289484-80289503 None:intergenic 40.0%
!! AGTAGTGTTGATTTGTGAGG+AGG + chr2_1:80289568-80289587 None:intergenic 40.0%
GAGGTTTGGAGAAAATTCTC+TGG - chr2_1:80289800-80289819 Msa0228360:intron 40.0%
TTGGAGAAAATTCTCTGGAC+TGG - chr2_1:80289805-80289824 Msa0228360:intron 40.0%
TGGAGAAAATTCTCTGGACT+GGG - chr2_1:80289806-80289825 Msa0228360:intron 40.0%
! GACTATACGTACTGATGATG+TGG - chr2_1:80289841-80289860 Msa0228360:intron 40.0%
! TATACGTACTGATGATGTGG+AGG - chr2_1:80289844-80289863 Msa0228360:intron 40.0%
GGACAACAATTCGACCTATA+CGG + chr2_1:80289964-80289983 None:intergenic 40.0%
TTGGCTAAAAAACATGGGAC+TGG + chr2_1:80290129-80290148 None:intergenic 40.0%
! AATGAAGGCTTTGGTAAGGA+AGG - chr2_1:80290368-80290387 Msa0228360:exon 40.0%
ATCACTATCTCTACTGACCT+TGG + chr2_1:80290420-80290439 None:intergenic 40.0%
AGGTCAGTAGAGATAGTGAT+TGG - chr2_1:80290420-80290439 Msa0228360:CDS 40.0%
GGTCAGTAGAGATAGTGATT+GGG - chr2_1:80290421-80290440 Msa0228360:CDS 40.0%
GTCAGTAGAGATAGTGATTG+GGG - chr2_1:80290422-80290441 Msa0228360:CDS 40.0%
TATCACTGGTGATCTCTTCA+GGG - chr2_1:80290524-80290543 Msa0228360:intron 40.0%
TGAATCTTCACTGGATGGAT+GGG - chr2_1:80290665-80290684 Msa0228360:CDS 40.0%
! CATCCCTCCATCATATTTTG+AGG + chr2_1:80290727-80290746 None:intergenic 40.0%
! CTCAAAATATGATGGAGGGA+TGG - chr2_1:80290725-80290744 Msa0228360:intron 40.0%
!!! CTGCTGTTTTCTCAGGTATA+TGG - chr2_1:80290778-80290797 Msa0228360:intron 40.0%
! GTTTTCTCAGGTATATGGAG+AGG - chr2_1:80290783-80290802 Msa0228360:intron 40.0%
CATCTGTCATGATAGGTATG+AGG - chr2_1:80291036-80291055 Msa0228360:intron 40.0%
CCTGTCATGGTAATACAGAT+AGG + chr2_1:80291308-80291327 None:intergenic 40.0%
CCTATCTGTATTACCATGAC+AGG - chr2_1:80291305-80291324 Msa0228360:intron 40.0%
!! GCCATTTTCATCATTTCGTC+CGG - chr2_1:80291335-80291354 Msa0228360:intron 40.0%
ACCGGACGAAATGATGAAAA+TGG + chr2_1:80291339-80291358 None:intergenic 40.0%
TTGGACATTACCTGTCTTCT+AGG + chr2_1:80291423-80291442 None:intergenic 40.0%
TCAGAGACAAGACAAATGCA+AGG + chr2_1:80291496-80291515 None:intergenic 40.0%
TCGAGGTTCAAATGTTCAAC+CGG + chr2_1:80291636-80291655 None:intergenic 40.0%
GGCTCCATTAGTTCAATAAC+TGG - chr2_1:80291662-80291681 Msa0228360:intron 40.0%
GCTTTCCGAACCTTTGTAAT+AGG - chr2_1:80291689-80291708 Msa0228360:intron 40.0%
ACTATGAGGCCCTATTACAA+AGG + chr2_1:80291702-80291721 None:intergenic 40.0%
GAAAAATAAAAGGGGGGAAG+GGG + chr2_1:80291817-80291836 None:intergenic 40.0%
GGAAAAATAAAAGGGGGGAA+GGG + chr2_1:80291818-80291837 None:intergenic 40.0%
AGGAAAAATAAAAGGGGGGA+AGG + chr2_1:80291819-80291838 None:intergenic 40.0%
! AAGAATAGACGGGGTTAGTA+AGG + chr2_1:80291918-80291937 None:intergenic 40.0%
! TTTGTGGTGGGAAGAATAGA+CGG + chr2_1:80291929-80291948 None:intergenic 40.0%
CTATTGCTTGGTTTCTAAGC+AGG + chr2_1:80291982-80292001 None:intergenic 40.0%
AGTCTGCGCAGAAAAAAAGA+GGG + chr2_1:80292087-80292106 None:intergenic 40.0%
AAGTCTGCGCAGAAAAAAAG+AGG + chr2_1:80292088-80292107 None:intergenic 40.0%
AGTAAATGCGTCAAAGAACC+AGG - chr2_1:80292192-80292211 Msa0228360:intron 40.0%
TATGAAAACACCTACAGGCA+AGG + chr2_1:80292257-80292276 None:intergenic 40.0%
CAACAAGGCAACTATAGTGT+GGG - chr2_1:80292501-80292520 Msa0228360:intron 40.0%
TTGTCCAATTGCTGACAACT+TGG - chr2_1:80292846-80292865 Msa0228360:CDS 40.0%
TTGTCCAAGTTGTCAGCAAT+TGG + chr2_1:80292853-80292872 None:intergenic 40.0%
TTAGTTTCATGTTCTGGCCT+TGG - chr2_1:80293249-80293268 Msa0228360:intron 40.0%
AGCAAGTTCTTAAAGCCAAG+AGG - chr2_1:80293292-80293311 Msa0228360:intron 40.0%
GCAAGTTCTTAAAGCCAAGA+GGG - chr2_1:80293293-80293312 Msa0228360:intron 40.0%
AACAAATGAACCTACCCTCT+TGG + chr2_1:80293310-80293329 None:intergenic 40.0%
GAAGATTCCTTGAGAAGATC+TGG - chr2_1:80293430-80293449 Msa0228360:intron 40.0%
TGGATACACAATAGTTCGTC+CGG - chr2_1:80293456-80293475 Msa0228360:intron 40.0%
! CAGTTTCTTTTGTAGTGTGC+CGG - chr2_1:80293493-80293512 Msa0228360:intron 40.0%
GGATTTAGAGGGAAAGAAGA+TGG + chr2_1:80293645-80293664 None:intergenic 40.0%
GGATTTAGAGGGAAAGAAGA+TGG + chr2_1:80293645-80293664 None:intergenic 40.0%
! TTGGTTTAGGGTATATGGAG+GGG + chr2_1:80293745-80293764 None:intergenic 40.0%
GTAAATGGGTCAGATATTCC+GGG + chr2_1:80293781-80293800 None:intergenic 40.0%
! GACTTGAATGTTTTGCTGAC+AGG - chr2_1:80294046-80294065 Msa0228360:intron 40.0%
TCAAGGAGACAGAATATCTC+GGG - chr2_1:80294103-80294122 Msa0228360:CDS 40.0%
TAGCAAATGTTGGGGGAAAT+AGG + chr2_1:80294165-80294184 None:intergenic 40.0%
GAGTGCCTTCACACATATAT+CGG + chr2_1:80294343-80294362 None:intergenic 40.0%
GAACATACCTCCTACAAGTA+AGG - chr2_1:80294692-80294711 Msa0228360:intron 40.0%
TTTGACGGAACCTTACTTGT+AGG + chr2_1:80294705-80294724 None:intergenic 40.0%
GATCCATTTATCCCTCTTAG+AGG - chr2_1:80295194-80295213 Msa0228360:CDS 40.0%
! GCAGCAATTGTTGTTGCTGA+AGG + chr2_1:80289489-80289508 None:intergenic 45.0%
!!! GCTGCTTTTTGGTGTATGAG+AGG + chr2_1:80289593-80289612 None:intergenic 45.0%
GGCAGATATTCGATGAGGTT+TGG - chr2_1:80289786-80289805 Msa0228360:intron 45.0%
GATGCTCTTCTTGTTCGTGA+AGG - chr2_1:80289872-80289891 Msa0228360:intron 45.0%
CAGTAGTATTCTGAGCACCA+GGG + chr2_1:80289919-80289938 None:intergenic 45.0%
ACAGTAGTATTCTGAGCACC+AGG + chr2_1:80289920-80289939 None:intergenic 45.0%
TTGTCCGTAAACTCATGCTC+AGG - chr2_1:80289978-80289997 Msa0228360:intron 45.0%
TGTCCGTAAACTCATGCTCA+GGG - chr2_1:80289979-80289998 Msa0228360:intron 45.0%
AACCCCTGAGCATGAGTTTA+CGG + chr2_1:80289985-80290004 None:intergenic 45.0%
! CTAAAAAACATGGGACTGGC+TGG + chr2_1:80290125-80290144 None:intergenic 45.0%
! CTGCAATGAAGGCTTTGGTA+AGG - chr2_1:80290364-80290383 Msa0228360:exon 45.0%
GAGATAGTGATTGGGGATGT+TGG - chr2_1:80290429-80290448 Msa0228360:CDS 45.0%
TGGTGATCCAAACACAGTCA+AGG - chr2_1:80290449-80290468 Msa0228360:intron 45.0%
ATCACCAGTGATAGTTGAGC+GGG + chr2_1:80290517-80290536 None:intergenic 45.0%
GATCACCAGTGATAGTTGAG+CGG + chr2_1:80290518-80290537 None:intergenic 45.0%
CTATCACTGGTGATCTCTTC+AGG - chr2_1:80290523-80290542 Msa0228360:intron 45.0%
CTGAATCTTCACTGGATGGA+TGG - chr2_1:80290664-80290683 Msa0228360:CDS 45.0%
!!! AATGGAGCTGCTGTTTTCTC+AGG - chr2_1:80290771-80290790 Msa0228360:intron 45.0%
GGGTATGTCTTCAATAGAGG+TGG - chr2_1:80290890-80290909 Msa0228360:intron 45.0%
!! CTGTCAAGAGTACTACCCAA+AGG + chr2_1:80290947-80290966 None:intergenic 45.0%
CTTTGGGTAGTACTCTTGAC+AGG - chr2_1:80290945-80290964 Msa0228360:CDS 45.0%
TCATGATAGGTATGAGGGCT+TGG - chr2_1:80291042-80291061 Msa0228360:intron 45.0%
! ATTCTAGAAGCTGGTCCTTC+AGG - chr2_1:80291103-80291122 Msa0228360:intron 45.0%
! TTCTAGAAGCTGGTCCTTCA+GGG - chr2_1:80291104-80291123 Msa0228360:intron 45.0%
AATGGCACTCTAACCTGTCA+TGG + chr2_1:80291321-80291340 None:intergenic 45.0%
! ACTGGATGATCTGGTTTCAC+CGG + chr2_1:80291357-80291376 None:intergenic 45.0%
! GGGTCTAAAACTGGATGATC+TGG + chr2_1:80291366-80291385 None:intergenic 45.0%
TTCAACTGCGATCTTACCAG+TGG + chr2_1:80291611-80291630 None:intergenic 45.0%
GTAAGATCGCAGTTGAACTC+CGG - chr2_1:80291614-80291633 Msa0228360:intron 45.0%
GGTTGAACATTTGAACCTCG+AGG - chr2_1:80291635-80291654 Msa0228360:intron 45.0%
GAGGCCCTATTACAAAGGTT+CGG + chr2_1:80291697-80291716 None:intergenic 45.0%
TGTTACTAGACAGAGGAGCA+AGG + chr2_1:80291772-80291791 None:intergenic 45.0%
TATCACTTAGAGTCCTCCAG+TGG - chr2_1:80291845-80291864 Msa0228360:intron 45.0%
! TAATGGACGTAATGGTCCAC+TGG + chr2_1:80291864-80291883 None:intergenic 45.0%
! TTGTGGTGGGAAGAATAGAC+GGG + chr2_1:80291928-80291947 None:intergenic 45.0%
CTAAGCAGGAGCAGTTAGAA+TGG + chr2_1:80291968-80291987 None:intergenic 45.0%
TCTGCGCAGAAAAAAAGAGG+GGG + chr2_1:80292085-80292104 None:intergenic 45.0%
GTCTGCGCAGAAAAAAAGAG+GGG + chr2_1:80292086-80292105 None:intergenic 45.0%
CCACACTATAGTTGCCTTGT+TGG + chr2_1:80292503-80292522 None:intergenic 45.0%
CCAACAAGGCAACTATAGTG+TGG - chr2_1:80292500-80292519 Msa0228360:intron 45.0%
AGAATGCATAACTAGGCACC+TGG - chr2_1:80293120-80293139 Msa0228360:intron 45.0%
GTTCTTAAAGCCAAGAGGGT+AGG - chr2_1:80293297-80293316 Msa0228360:intron 45.0%
ACCTTAATCCCGAATTCTCC+AGG - chr2_1:80293402-80293421 Msa0228360:intron 45.0%
GGATACACAATAGTTCGTCC+GGG - chr2_1:80293457-80293476 Msa0228360:intron 45.0%
! GATGGGTGAGTGGATTTAGA+GGG + chr2_1:80293656-80293675 None:intergenic 45.0%
! AGATGGGTGAGTGGATTTAG+AGG + chr2_1:80293657-80293676 None:intergenic 45.0%
TGCTCCCCTCTAATATTGAG+TGG + chr2_1:80293695-80293714 None:intergenic 45.0%
! TTTAGGGTATATGGAGGGGA+AGG + chr2_1:80293741-80293760 None:intergenic 45.0%
!! CGGAGGGAGTATTTGGTTTA+GGG + chr2_1:80293757-80293776 None:intergenic 45.0%
!! ACGGAGGGAGTATTTGGTTT+AGG + chr2_1:80293758-80293777 None:intergenic 45.0%
! CCAAACTGGCTCAGATATAC+CGG - chr2_1:80293964-80293983 Msa0228360:CDS 45.0%
! CAAACTGGCTCAGATATACC+GGG - chr2_1:80293965-80293984 Msa0228360:CDS 45.0%
! TTTTGCTGACAGGAAGAACC+TGG - chr2_1:80294056-80294075 Msa0228360:intron 45.0%
TGTGGCCGATATATGTGTGA+AGG - chr2_1:80294335-80294354 Msa0228360:CDS 45.0%
ATGTTACGAGTACGTTGCTG+AGG - chr2_1:80294475-80294494 Msa0228360:CDS 45.0%
! TGGGAATGAGCTTTATGAGC+TGG - chr2_1:80294499-80294518 Msa0228360:CDS 45.0%
ATTTGCTTTGTCCGGCAAGT+GGG + chr2_1:80294611-80294630 None:intergenic 45.0%
TATTTGCTTTGTCCGGCAAG+TGG + chr2_1:80294612-80294631 None:intergenic 45.0%
GAAGAATACCTGAACATCCC+TGG - chr2_1:80294663-80294682 Msa0228360:intron 45.0%
! TTGTAGGAGGTATGTTCTCC+AGG + chr2_1:80294689-80294708 None:intergenic 45.0%
!! ATACCTTTGGAGTTGCATGC+TGG - chr2_1:80294967-80294986 Msa0228360:intron 45.0%
ATTCCAGCATGCAACTCCAA+AGG + chr2_1:80294973-80294992 None:intergenic 45.0%
TGGAATCACTCTTCTTGAGC+CGG - chr2_1:80294987-80295006 Msa0228360:intron 45.0%
! CCACCTCTAAGAGGGATAAA+TGG + chr2_1:80295200-80295219 None:intergenic 45.0%
CCATTTATCCCTCTTAGAGG+TGG - chr2_1:80295197-80295216 Msa0228360:CDS 45.0%
! TAGACAGACCACCTCTAAGA+GGG + chr2_1:80295208-80295227 None:intergenic 45.0%
ATAGACAGACCACCTCTAAG+AGG + chr2_1:80295209-80295228 None:intergenic 45.0%
!! AAATTAAAAATAAAATATAG+GGG + chr2_1:80290868-80290887 None:intergenic 5.0%
TCTTTGCCATCCCTGGTGTT+TGG + chr2_1:80289660-80289679 None:intergenic 50.0%
TGTTGTCGTCGTCGTCGTTT+GGG + chr2_1:80289697-80289716 None:intergenic 50.0%
TTGTTGTCGTCGTCGTCGTT+TGG + chr2_1:80289698-80289717 None:intergenic 50.0%
ATCTTCGACCAAGTCCCACA+GGG + chr2_1:80289763-80289782 None:intergenic 50.0%
ATCGCGGCAGATATTCGATG+AGG - chr2_1:80289781-80289800 Msa0228360:intron 50.0%
GGGATGGCAAACTCACACAT+AGG + chr2_1:80289899-80289918 None:intergenic 50.0%
ATGTGTGAGTTTGCCATCCC+TGG - chr2_1:80289899-80289918 Msa0228360:intron 50.0%
AGTATTCTGAGCACCAGGGA+TGG + chr2_1:80289915-80289934 None:intergenic 50.0%
!! GTTGGTGCTACTAGCCGTAT+AGG - chr2_1:80289947-80289966 Msa0228360:intron 50.0%
GTCCGTAAACTCATGCTCAG+GGG - chr2_1:80289980-80289999 Msa0228360:intron 50.0%
GGTAAGGAAGGCAGATGAAG+AGG - chr2_1:80290380-80290399 Msa0228360:CDS 50.0%
AAGGAAGGCAGATGAAGAGG+TGG - chr2_1:80290383-80290402 Msa0228360:CDS 50.0%
ACAGCAGCCTTGACTGTGTT+TGG + chr2_1:80290459-80290478 None:intergenic 50.0%
ACAGTCAAGGCTGCTGTAGA+AGG - chr2_1:80290462-80290481 Msa0228360:intron 50.0%
! CTCTTCAGGGTTGATCAGCA+AGG - chr2_1:80290537-80290556 Msa0228360:CDS 50.0%
GATGGATGGGAAGTTCGTCA+AGG - chr2_1:80290678-80290697 Msa0228360:CDS 50.0%
TCTAGAAGCTGGTCCTTCAG+GGG - chr2_1:80291105-80291124 Msa0228360:intron 50.0%
ACGGTTTGAGCCTAGAAGAC+AGG - chr2_1:80291410-80291429 Msa0228360:intron 50.0%
ACATTTGAACCTCGAGGCAG+TGG - chr2_1:80291641-80291660 Msa0228360:intron 50.0%
GACAGAGGAGCAAGGAATCA+GGG + chr2_1:80291764-80291783 None:intergenic 50.0%
AGACAGAGGAGCAAGGAATC+AGG + chr2_1:80291765-80291784 None:intergenic 50.0%
! TGTGGTGGGAAGAATAGACG+GGG + chr2_1:80291927-80291946 None:intergenic 50.0%
TGCGCAGAAAAAAAGAGGGG+GGG + chr2_1:80292083-80292102 None:intergenic 50.0%
CTGCGCAGAAAAAAAGAGGG+GGG + chr2_1:80292084-80292103 None:intergenic 50.0%
GCTGAAAGCTTCTCGAATCC+TGG + chr2_1:80292213-80292232 None:intergenic 50.0%
CATGTGAATATGCCGCAGAC+TGG - chr2_1:80293207-80293226 Msa0228360:intron 50.0%
TCGGTTTCTTGTCCAGTCTG+CGG + chr2_1:80293222-80293241 None:intergenic 50.0%
! TTGGTATTGAGCCTTCCAGG+CGG - chr2_1:80293268-80293287 Msa0228360:intron 50.0%
! TTTAAGAACTTGCTCCCGCC+TGG + chr2_1:80293286-80293305 None:intergenic 50.0%
GCCTGGAGAATTCGGGATTA+AGG + chr2_1:80293406-80293425 None:intergenic 50.0%
TAATCCCGAATTCTCCAGGC+AGG - chr2_1:80293406-80293425 Msa0228360:intron 50.0%
TTCACCTGCCTGGAGAATTC+GGG + chr2_1:80293413-80293432 None:intergenic 50.0%
CTTCACCTGCCTGGAGAATT+CGG + chr2_1:80293414-80293433 None:intergenic 50.0%
TCAAGGAATCTTCACCTGCC+TGG + chr2_1:80293423-80293442 None:intergenic 50.0%
TCCTTGAGAAGATCTGGGCT+TGG - chr2_1:80293436-80293455 Msa0228360:intron 50.0%
TCCAAGCCCAGATCTTCTCA+AGG + chr2_1:80293440-80293459 None:intergenic 50.0%
AACTGTACCTGCAATGGACC+CGG + chr2_1:80293478-80293497 None:intergenic 50.0%
AGGGAAAGAAGATGGGTGAG+TGG + chr2_1:80293666-80293685 None:intergenic 50.0%
ATGGGTCAGATATTCCGGGA+CGG + chr2_1:80293777-80293796 None:intergenic 50.0%
CCGGTATATCTGAGCCAGTT+TGG + chr2_1:80293967-80293986 None:intergenic 50.0%
TACGAGTACGTTGCTGAGGA+TGG - chr2_1:80294479-80294498 Msa0228360:CDS 50.0%
ACGAGTACGTTGCTGAGGAT+GGG - chr2_1:80294480-80294499 Msa0228360:CDS 50.0%
! TAATCAGGTTGCCCACTTGC+CGG - chr2_1:80294597-80294616 Msa0228360:CDS 50.0%
TTCTCCAAGACAGAGAGAGC+TGG + chr2_1:80294646-80294665 None:intergenic 50.0%
GACGGAACCTTACTTGTAGG+AGG + chr2_1:80294702-80294721 None:intergenic 50.0%
ATCACTCTTCTTGAGCCGGA+AGG - chr2_1:80294991-80295010 Msa0228360:intron 50.0%
TCTTCTTGAGCCGGAAGGAT+AGG - chr2_1:80294996-80295015 Msa0228360:intron 50.0%
CTTCTTGAGCCGGAAGGATA+GGG - chr2_1:80294997-80295016 Msa0228360:intron 50.0%
TTCTTGAGCCGGAAGGATAG+GGG - chr2_1:80294998-80295017 Msa0228360:intron 50.0%
TCTACCATCCCCTATCCTTC+CGG + chr2_1:80295009-80295028 None:intergenic 50.0%
ACTCTATGGAGACCCAACCA+AGG - chr2_1:80295138-80295157 Msa0228360:CDS 50.0%
CTCTATGGAGACCCAACCAA+GGG - chr2_1:80295139-80295158 Msa0228360:CDS 50.0%
!!! GGAGCGGGTATGCTGCTTTT+TGG + chr2_1:80289604-80289623 None:intergenic 55.0%
CAGTCGTTGTACAGAGGAGC+GGG + chr2_1:80289619-80289638 None:intergenic 55.0%
GCAGTCGTTGTACAGAGGAG+CGG + chr2_1:80289620-80289639 None:intergenic 55.0%
AGGAGGCAGTCGTTGTACAG+AGG + chr2_1:80289625-80289644 None:intergenic 55.0%
! TTTGGAGCAGCGGCTATAGG+AGG + chr2_1:80289642-80289661 None:intergenic 55.0%
! GTGTTTGGAGCAGCGGCTAT+AGG + chr2_1:80289645-80289664 None:intergenic 55.0%
! ATCCCTGGTGTTTGGAGCAG+CGG + chr2_1:80289652-80289671 None:intergenic 55.0%
! CTTGCTGTCTTTGCCATCCC+TGG + chr2_1:80289667-80289686 None:intergenic 55.0%
GATCTTCGACCAAGTCCCAC+AGG + chr2_1:80289764-80289783 None:intergenic 55.0%
! TGGGACTTGGTCGAAGATCG+CGG - chr2_1:80289765-80289784 Msa0228360:intron 55.0%
! CTGGACTGGGTCAGATCTCT+AGG - chr2_1:80289819-80289838 Msa0228360:intron 55.0%
GCTCAGGGGTTACTCTGTCA+AGG - chr2_1:80289994-80290013 Msa0228360:intron 55.0%
AGGTGGTAGAGCTGCTTCCA+AGG - chr2_1:80290400-80290419 Msa0228360:CDS 55.0%
AGTGATAGTTGAGCGGGCAG+TGG + chr2_1:80290511-80290530 None:intergenic 55.0%
ACTGCCCGCTCAACTATCAC+TGG - chr2_1:80290510-80290529 Msa0228360:intron 55.0%
! AATTGGCTCAGTTGCGCGCT+GGG - chr2_1:80290601-80290620 Msa0228360:intron 55.0%
! GAGGGCTTGGTTCTCTCTGT+TGG - chr2_1:80291055-80291074 Msa0228360:intron 55.0%
! GGCTTGGTTCTCTCTGTTGG+CGG - chr2_1:80291058-80291077 Msa0228360:intron 55.0%
GTTCTCTCTGTTGGCGGCAA+TGG - chr2_1:80291064-80291083 Msa0228360:intron 55.0%
!! CTCTGACTTGGATCCCCTGA+AGG + chr2_1:80291121-80291140 None:intergenic 55.0%
!! GGGGGGAAGGGGTATTATGT+AGG + chr2_1:80291806-80291825 None:intergenic 55.0%
TGGACGTAATGGTCCACTGG+AGG + chr2_1:80291861-80291880 None:intergenic 55.0%
AGAAAAAAAGAGGGGGGGGG+GGG + chr2_1:80292078-80292097 None:intergenic 55.0%
CAGAAAAAAAGAGGGGGGGG+GGG + chr2_1:80292079-80292098 None:intergenic 55.0%
GCAGAAAAAAAGAGGGGGGG+GGG + chr2_1:80292080-80292099 None:intergenic 55.0%
CGCAGAAAAAAAGAGGGGGG+GGG + chr2_1:80292081-80292100 None:intergenic 55.0%
GCGCAGAAAAAAAGAGGGGG+GGG + chr2_1:80292082-80292101 None:intergenic 55.0%
! GCCTTGGTATTGAGCCTTCC+AGG - chr2_1:80293265-80293284 Msa0228360:intron 55.0%
GCCTGGAAGGCTCAATACCA+AGG + chr2_1:80293269-80293288 None:intergenic 55.0%
! TGGTATTGAGCCTTCCAGGC+GGG - chr2_1:80293269-80293288 Msa0228360:intron 55.0%
GGGTATATGGAGGGGAAGGA+AGG + chr2_1:80293737-80293756 None:intergenic 55.0%
ACCAAATACTCCCTCCGTCC+CGG - chr2_1:80293760-80293779 Msa0228360:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG + chr2_1:80293773-80293792 None:intergenic 55.0%
CTGGCTCAGATATACCGGGA+CGG - chr2_1:80293969-80293988 Msa0228360:CDS 55.0%
CTCAGATATACCGGGACGGA+GGG - chr2_1:80293973-80293992 Msa0228360:CDS 55.0%
ACATAGTACTCCCTCCGTCC+CGG + chr2_1:80293986-80294005 None:intergenic 55.0%
TGCTGACAGGAAGAACCTGG+TGG - chr2_1:80294059-80294078 Msa0228360:intron 55.0%
GCTGACAGGAAGAACCTGGT+GGG - chr2_1:80294060-80294079 Msa0228360:intron 55.0%
! GGGCATCAGTTGTGCTGATG+TGG - chr2_1:80294317-80294336 Msa0228360:CDS 55.0%
GACACCAGCTCTCTCTGTCT+TGG - chr2_1:80294639-80294658 Msa0228360:CDS 55.0%
ATACCTGAACATCCCTGGCC+TGG - chr2_1:80294668-80294687 Msa0228360:intron 55.0%
GAGGTATGTTCTCCAGGCCA+GGG + chr2_1:80294683-80294702 None:intergenic 55.0%
TAGCCGCTGCTCCAAACACC+AGG - chr2_1:80289646-80289665 Msa0228360:three_prime_UTR 60.0%
AGCCGCTGCTCCAAACACCA+GGG - chr2_1:80289647-80289666 Msa0228360:three_prime_UTR 60.0%
GCTGCTCCAAACACCAGGGA+TGG - chr2_1:80289651-80289670 Msa0228360:three_prime_UTR 60.0%
TCTCGACGACGTCAACCCTG+TGG - chr2_1:80289745-80289764 Msa0228360:intron 60.0%
CTCGACGACGTCAACCCTGT+GGG - chr2_1:80289746-80289765 Msa0228360:intron 60.0%
GACGTCAACCCTGTGGGACT+TGG - chr2_1:80289752-80289771 Msa0228360:intron 60.0%
! CAATTGGCTCAGTTGCGCGC+TGG - chr2_1:80290600-80290619 Msa0228360:intron 60.0%
CTAATGGAGCCACTGCCTCG+AGG + chr2_1:80291653-80291672 None:intergenic 60.0%
AAAAAAAGAGGGGGGGGGGG+GGG + chr2_1:80292076-80292095 None:intergenic 60.0%
GAAAAAAAGAGGGGGGGGGG+GGG + chr2_1:80292077-80292096 None:intergenic 60.0%
! AGAACTTGCTCCCGCCTGGA+AGG + chr2_1:80293282-80293301 None:intergenic 60.0%
AGTTCGTCCGGGTCCATTGC+AGG - chr2_1:80293468-80293487 Msa0228360:intron 60.0%
!! TCCGGGACGGAGGGAGTATT+TGG + chr2_1:80293764-80293783 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG + chr2_1:80293774-80293793 None:intergenic 60.0%
GCTCAGATATACCGGGACGG+AGG - chr2_1:80293972-80293991 Msa0228360:CDS 60.0%
ATTAGAGCACGCTGCCCACC+AGG + chr2_1:80294077-80294096 None:intergenic 60.0%
TCTCCAGGCCAGGGATGTTC+AGG + chr2_1:80294674-80294693 None:intergenic 60.0%
! GGAGGTATGTTCTCCAGGCC+AGG + chr2_1:80294684-80294703 None:intergenic 60.0%
TGAGCCGGAAGGATAGGGGA+TGG - chr2_1:80295002-80295021 Msa0228360:intron 60.0%
AAAAAAGAGGGGGGGGGGGG+GGG + chr2_1:80292075-80292094 None:intergenic 65.0%
AAAAAGAGGGGGGGGGGGGG+GGG + chr2_1:80292074-80292093 None:intergenic 70.0%
AAAAGAGGGGGGGGGGGGGG+GGG + chr2_1:80292073-80292092 None:intergenic 75.0%
! AAAGAGGGGGGGGGGGGGGG+GGG + chr2_1:80292072-80292091 None:intergenic 80.0%
! AAGAGGGGGGGGGGGGGGGG+GGG + chr2_1:80292071-80292090 None:intergenic 85.0%
! AGAGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292070-80292089 None:intergenic 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292068-80292087 None:intergenic 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG + chr2_1:80292069-80292088 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 80289474 80295581 80289474 ID=Msa0228360;Name=Msa0228360
chr2_1 mRNA 80289474 80295581 80289474 ID=Msa0228360-mRNA-1;Parent=Msa0228360;Name=Msa0228360-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.92|0.85|1|0.92|0.85|14|232|575
chr2_1 exon 80289474 80289672 80289474 ID=Msa0228360-mRNA-1:exon:24410;Parent=Msa0228360-mRNA-1
chr2_1 exon 80290347 80290451 80290347 ID=Msa0228360-mRNA-1:exon:24409;Parent=Msa0228360-mRNA-1
chr2_1 exon 80290535 80290582 80290535 ID=Msa0228360-mRNA-1:exon:24408;Parent=Msa0228360-mRNA-1
chr2_1 exon 80290660 80290737 80290660 ID=Msa0228360-mRNA-1:exon:24407;Parent=Msa0228360-mRNA-1
chr2_1 exon 80290931 80290987 80290931 ID=Msa0228360-mRNA-1:exon:24406;Parent=Msa0228360-mRNA-1
chr2_1 exon 80291566 80291631 80291566 ID=Msa0228360-mRNA-1:exon:24405;Parent=Msa0228360-mRNA-1
chr2_1 exon 80291741 80291830 80291741 ID=Msa0228360-mRNA-1:exon:24404;Parent=Msa0228360-mRNA-1
chr2_1 exon 80292794 80292874 80292794 ID=Msa0228360-mRNA-1:exon:24403;Parent=Msa0228360-mRNA-1
chr2_1 exon 80293624 80293728 80293624 ID=Msa0228360-mRNA-1:exon:24402;Parent=Msa0228360-mRNA-1
chr2_1 exon 80293869 80294004 80293869 ID=Msa0228360-mRNA-1:exon:24401;Parent=Msa0228360-mRNA-1
chr2_1 exon 80294089 80294164 80294089 ID=Msa0228360-mRNA-1:exon:24400;Parent=Msa0228360-mRNA-1
chr2_1 exon 80294263 80294680 80294263 ID=Msa0228360-mRNA-1:exon:24399;Parent=Msa0228360-mRNA-1
chr2_1 exon 80295040 80295387 80295040 ID=Msa0228360-mRNA-1:exon:24398;Parent=Msa0228360-mRNA-1
chr2_1 exon 80295429 80295581 80295429 ID=Msa0228360-mRNA-1:exon:24397;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80295429 80295581 80295429 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80295040 80295387 80295040 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80294263 80294680 80294263 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80294089 80294164 80294089 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80293869 80294004 80293869 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80293624 80293728 80293624 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80292794 80292874 80292794 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80291741 80291830 80291741 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80291566 80291631 80291566 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80290931 80290987 80290931 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80290660 80290737 80290660 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80290535 80290582 80290535 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 CDS 80290380 80290451 80290380 ID=Msa0228360-mRNA-1:cds;Parent=Msa0228360-mRNA-1
chr2_1 three_prime_UTR 80290347 80290379 80290347 ID=Msa0228360-mRNA-1:three_prime_utr;Parent=Msa0228360-mRNA-1
chr2_1 three_prime_UTR 80289474 80289672 80289474 ID=Msa0228360-mRNA-1:three_prime_utr;Parent=Msa0228360-mRNA-1
Gene Sequence

>Msa0228360

ATGAGTACCTCACCTTCAGCAACAACAATTGCTGCTGCTGCTGTGTACTCAAAGTATCATAATATTAATACAACACTTTCACTTTCAGGAGCCTCCTCACAAATCAACACTACTTTCCTCTCATACACCAAAAAGCAGCATACCCGCTCCTCTGGATGGCAAAGACAGCAAGAACAACACCCAAACGACGACGACGACAACAACGATGACAAACAATCTGTTTCTCTTAGTCTCGACGACGTCAACCCTGTGGGACTTGGTCGAAGATCGCGGCAGATATTCGATGAGGTTTGGAGAAAATTCTCTGGACTGGGTCAGATCTCTAGGACTATACGTACTGATGATGTGGAGGCACTAGATGCTCTTCTTGTTCGTGAAGGTCCTATGTGTGAGTTTGCCATCCCTGGTGCTCAGAATACTACTGTACTTGTTGTTGGTGCTACTAGCCGTATAGGTCGAATTGTTGTCCGTAAACTCATGCTCAGGGGTTACTCTGTCAAGGCTTTGGTAAGGAAGGCAGATGAAGAGGTGGTAGAGCTGCTTCCAAGGTCAGTAGAGATAGTGATTGGGGATGTTGGTGATCCAAACACAGTCAAGGCTGCTGTAGAAGGCTGCAATAAAATCATATATTGTGCCACTGCCCGCTCAACTATCACTGGTGATCTCTTCAGGGTTGATCAGCAAGGAGTTTATAATCTATCTAAAGCATTTCAGGATCACAACAATCAATTGGCTCAGTTGCGCGCTGGGAAAAGCAGCAAAAGTAAGCTTACAATTGCTAAATTTAAATCTGAATCTTCACTGGATGGATGGGAAGTTCGTCAAGGAACTTACTTCGAAGATGTAGTTACCTCAAAATATGATGGAGGGATGGATGCCAAATTTGAGTTCACTGAGAATGGAGCTGCTGTTTTCTCAGGGTATGTCTTCAATAGAGGTGGCTATGTAGAACTGTCAAAAAAGCTTTCTCTACCTTTGGGTAGTACTCTTGACAGGTATGAGGGCTTGGTTCTCTCTGTTGGCGGCAATGGAAGACCTTATGTATTAATTCTAGAAGCTGGTCCTTCAGGGGATCCAAGTCAGAGTAAATTGTATTTTGCAAGAATTAGTACAAAAGTGGGATTTTGTAGGGTTAGAGTGCCATTTTCATCATTTCGTCCGGTGAAACCAGATCATCCAGTTTTAGACCCTTTTCTTGTACATACATTAACAATACGGTTTGAGCCTAGAAGACAGAGGTCTGATATAGTAAATGCGTCAAAGAACCAGGATTCGAGAAGCTTTCAGCTAATATTGGAATATATAAAAGCCTTGCCTACTGGACAAGAAACCGATTTTGTCTTAGTTTCATGTTCTGGCCTTGGTATTGAGCCTTCCAGGCGGGAGCAAGTTCTTAAAGCCAAGAGGGCAGGTGAAGATTCCTTGAGAAGATCTGGGCTTGGATACACAATAGTTCGTCCGGGTCCATTGCAGGAAGAACCTGGTGGGCAGCGTGCTCTAATATTTGATCAAGGAGACAGAATATCTCGGGGCATCAGTTGTGCTGATGTGGCCGATATATGTGTGAAGGCACTCCATGATTCAACTGCAAGAAACAAAAGCTTTGATGTATGTTACGAGTACGTTGCTGAGGATGGGAATGAGCTTTATGAGCTGGTTGCCCACTTGCCGGACAAAGCAAATAACTATCTGACACCAGCTCTCTCTGTCTTGGAGAAGAATACCTGA

Protein sequence

>Msa0228360

MSTSPSATTIAAAAVYSKYHNINTTLSLSGASSQINTTFLSYTKKQHTRSSGWQRQQEQHPNDDDDNNDDKQSVSLSLDDVNPVGLGRRSRQIFDEVWRKFSGLGQISRTIRTDDVEALDALLVREGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYSVKALVRKADEEVVELLPRSVEIVIGDVGDPNTVKAAVEGCNKIIYCATARSTITGDLFRVDQQGVYNLSKAFQDHNNQLAQLRAGKSSKSKLTIAKFKSESSLDGWEVRQGTYFEDVVTSKYDGGMDAKFEFTENGAAVFSGYVFNRGGYVELSKKLSLPLGSTLDRYEGLVLSVGGNGRPYVLILEAGPSGDPSQSKLYFARISTKVGFCRVRVPFSSFRPVKPDHPVLDPFLVHTLTIRFEPRRQRSDIVNASKNQDSRSFQLILEYIKALPTGQETDFVLVSCSGLGIEPSRREQVLKAKRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGDRISRGISCADVADICVKALHDSTARNKSFDVCYEYVAEDGNELYELVAHLPDKANNYLTPALSVLEKNT*