AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0260930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0260930 MtrunA17_Chr2g0322351 96.472 737 25 1 1 736 1 737 0.0 1469
Msa0260930 MtrunA17_Chr4g0025201 58.690 748 290 8 1 735 1 742 0.0 876
Msa0260930 MtrunA17_Chr2g0322361 58.245 752 292 9 1 734 1 748 0.0 875
Msa0260930 MtrunA17_Chr2g0322371 58.121 745 292 8 1 733 1 737 0.0 857
Msa0260930 MtrunA17_Chr2g0322341 74.640 347 82 4 1 343 3 347 1.88e-179 516
Msa0260930 MtrunA17_Chr2g0322331 64.304 381 117 6 371 734 1 379 1.10e-162 474
Msa0260930 MtrunA17_Chr3g0088821 33.712 792 429 20 21 726 271 1052 2.98e-129 410
Msa0260930 MtrunA17_Chr4g0073711 33.922 793 449 20 1 726 228 1012 1.32e-128 407
Msa0260930 MtrunA17_Chr3g0137951 33.458 804 438 20 7 726 270 1060 1.55e-127 405
Msa0260930 MtrunA17_Chr8g0379241 33.756 788 445 21 7 726 185 963 2.98e-127 402
Msa0260930 MtrunA17_Chr8g0364641 33.418 784 454 18 1 726 182 955 3.49e-127 402
Msa0260930 MtrunA17_Chr2g0284211 33.419 778 439 19 21 726 181 951 3.03e-126 400
Msa0260930 MtrunA17_Chr8g0352231 33.333 780 424 20 33 726 283 1052 3.42e-125 399
Msa0260930 MtrunA17_Chr1g0201731 33.580 810 444 21 3 726 270 1071 4.53e-125 399
Msa0260930 MtrunA17_Chr8g0383701 32.925 817 445 20 1 726 266 1070 1.72e-124 398
Msa0260930 MtrunA17_Chr1g0183381 32.822 783 451 19 8 726 107 878 4.37e-123 389
Msa0260930 MtrunA17_Chr3g0102541 33.554 754 443 17 1 724 1 726 4.99e-123 384
Msa0260930 MtrunA17_Chr7g0267731 33.000 800 443 23 8 723 167 957 8.90e-123 390
Msa0260930 MtrunA17_Chr3g0102531 33.378 752 443 16 1 724 1 722 2.07e-122 383
Msa0260930 MtrunA17_Chr3g0078671 32.494 794 440 22 21 726 238 1023 4.80e-120 385
Msa0260930 MtrunA17_Chr3g0102551 33.146 712 407 17 49 729 62 735 4.83e-117 369
Msa0260930 MtrunA17_Chr4g0046401 31.614 756 468 15 2 731 3 735 2.50e-114 362
Msa0260930 MtrunA17_Chr1g0186381 32.464 690 432 12 47 723 58 726 2.12e-111 354
Msa0260930 MtrunA17_Chr2g0298581 31.966 707 434 17 19 710 17 691 2.38e-109 347
Msa0260930 MtrunA17_Chr5g0410641 30.191 838 440 18 28 735 275 1097 2.83e-106 349
Msa0260930 MtrunA17_Chr3g0095791 30.780 705 436 19 21 708 19 688 3.01e-104 334
Msa0260930 MtrunA17_Chr3g0077511 30.725 703 434 18 20 703 18 686 3.68e-101 326
Msa0260930 MtrunA17_Chr2g0307191 30.891 696 430 19 31 709 29 690 1.06e-100 325
Msa0260930 MtrunA17_Chr1g0165411 30.159 819 442 20 8 705 251 1060 3.35e-100 333
Msa0260930 MtrunA17_Chr1g0165421 30.196 818 434 18 21 705 275 1088 7.43e-100 332
Msa0260930 MtrunA17_Chr4g0039801 29.693 815 439 17 21 705 289 1099 1.33e-99 332
Msa0260930 MtrunA17_Chr7g0269741 28.855 856 446 23 21 728 313 1153 5.99e-95 319
Msa0260930 MtrunA17_Chr2g0297351 26.941 850 462 21 21 735 175 1000 9.68e-81 278
Msa0260930 MtrunA17_Chr7g0274751 31.122 588 297 14 28 531 119 682 5.42e-78 267
Msa0260930 MtrunA17_Chr2g0296991 38.718 390 216 9 8 376 206 593 1.14e-75 264
Msa0260930 MtrunA17_Chr2g0296991 31.871 342 217 8 394 726 684 1018 4.65e-43 168
Msa0260930 MtrunA17_Chr2g0307241 42.169 166 90 3 26 189 24 185 4.98e-34 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0260930 AT2G32530.1 46.011 752 362 12 8 727 10 749 0.0 641
Msa0260930 AT2G32540.1 46.834 758 358 13 3 727 4 749 0.0 638
Msa0260930 AT2G32620.1 45.286 753 368 12 8 727 10 751 0.0 611
Msa0260930 AT4G15320.5 44.063 758 374 14 7 727 9 753 0.0 600
Msa0260930 AT4G15320.3 44.063 758 374 14 7 727 9 753 0.0 600
Msa0260930 AT4G15320.4 43.208 773 374 15 7 727 9 768 0.0 592
Msa0260930 AT4G15290.1 44.386 757 375 13 8 730 10 754 0.0 589
Msa0260930 AT2G32610.1 43.767 754 380 12 8 727 10 753 0.0 585
Msa0260930 AT2G32620.4 45.195 666 321 12 95 727 1 655 0.0 543
Msa0260930 AT2G32620.3 47.667 600 289 10 8 593 10 598 0.0 540
Msa0260930 AT4G15320.2 42.363 694 313 14 7 640 9 675 1.02e-175 523
Msa0260930 AT2G32620.2 49.231 520 242 8 8 515 10 519 1.01e-166 491
Msa0260930 AT4G15320.1 39.891 737 313 16 7 640 9 718 2.84e-166 500
Msa0260930 AT1G55850.1 37.696 703 363 13 49 724 66 720 1.02e-134 415
Msa0260930 AT4G32410.1 33.990 812 441 22 1 726 252 1054 4.68e-133 421
Msa0260930 AT5G09870.1 33.620 815 440 20 1 726 241 1043 1.28e-132 419
Msa0260930 AT5G17420.1 35.325 770 427 23 21 726 238 1000 1.29e-131 416
Msa0260930 AT5G64740.1 33.900 823 430 23 1 726 253 1058 2.01e-129 411
Msa0260930 AT5G05170.1 33.796 793 426 18 21 726 259 1039 3.71e-129 410
Msa0260930 AT4G18780.1 33.588 786 440 18 16 726 179 957 8.09e-127 402
Msa0260930 AT2G25540.1 34.137 788 423 20 26 726 256 1034 1.21e-126 403
Msa0260930 AT2G21770.1 32.310 814 452 20 1 726 259 1061 2.24e-122 392
Msa0260930 AT4G24010.1 35.276 652 354 14 53 674 61 674 1.15e-121 382
Msa0260930 AT4G39350.1 32.357 819 446 24 1 726 254 1057 2.00e-120 387
Msa0260930 AT4G23990.1 34.150 694 400 17 59 729 86 745 1.06e-117 371
Msa0260930 AT4G24000.1 34.548 686 397 17 61 729 66 716 1.20e-117 370
Msa0260930 AT1G02730.1 29.432 863 439 24 21 728 318 1165 1.55e-97 327
Msa0260930 AT3G03050.1 29.766 813 439 18 21 705 294 1102 2.84e-96 323
Msa0260930 AT5G16910.1 29.383 810 443 18 21 705 297 1102 6.53e-95 319
Msa0260930 AT1G32180.1 28.571 833 436 23 21 707 122 941 2.07e-94 315
Msa0260930 AT1G32180.2 28.571 833 436 23 21 707 122 941 2.07e-94 315
Msa0260930 AT4G38190.1 28.729 818 449 21 7 705 261 1063 2.46e-94 317
Msa0260930 AT2G33100.2 27.966 826 456 14 12 705 177 995 1.04e-93 314
Msa0260930 AT2G33100.1 27.966 826 456 14 12 705 177 995 1.04e-93 314
Msa0260930 AT4G24000.2 32.855 557 324 16 188 729 3 524 7.77e-79 262
Msa0260930 AT5G44030.1 38.442 398 222 9 8 384 199 594 8.86e-79 273
Msa0260930 AT5G44030.1 31.977 344 216 9 394 726 687 1023 5.93e-41 162
Msa0260930 AT5G44030.2 38.442 398 222 9 8 384 228 623 1.01e-78 273
Msa0260930 AT5G44030.2 31.977 344 216 9 394 726 716 1052 5.04e-41 162
Msa0260930 AT4G23990.2 32.447 564 324 17 188 729 3 531 3.47e-77 258
Msa0260930 AT5G44030.3 40.968 310 170 6 86 384 8 315 4.07e-67 236
Msa0260930 AT5G44030.3 31.977 344 216 9 394 726 408 744 1.53e-41 162

Find 170 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCAATACACCTTCTTTAT+TGG 0.103536 2_2:-58910498 None:intergenic
CTCTTCCTTCTCTTGCTTCT+TGG 0.111713 2_2:+58910645 Msa0260930:CDS
ACCAGATCCATTGGCCTTTA+TGG 0.113431 2_2:+58916406 Msa0260930:CDS
GCATTGGCTACTAGCTTATT+TGG 0.169777 2_2:+58917597 Msa0260930:CDS
CATAGAAGAAAAGTAATTTA+TGG 0.180281 2_2:+58914291 Msa0260930:CDS
CTTACTTAGTTGCATGTTAT+TGG 0.184423 2_2:+58917679 Msa0260930:CDS
CTTTGCGTTGGTAGGTGATA+TGG 0.227913 2_2:+58913211 Msa0260930:intron
TTAGAGATGGAAGTGGTATT+TGG 0.235169 2_2:+58915433 Msa0260930:intron
AACCAATCTTGATAAAATTC+TGG 0.248631 2_2:-58911469 None:intergenic
CTTGATATGTACCTTGATTA+TGG 0.259632 2_2:-58912031 None:intergenic
CCAGATCCATTGGCCTTTAT+GGG 0.260820 2_2:+58916407 Msa0260930:CDS
AGAGCAGCATAACAAATTTC+AGG 0.264880 2_2:-58916605 None:intergenic
CCAAAGCTTAGCAAATTTAG+AGG 0.286325 2_2:-58911356 None:intergenic
GGCTTCCACAAGAGCATAAA+AGG 0.288813 2_2:-58911335 None:intergenic
ACATTGTATTTCTTACAAAA+AGG 0.291470 2_2:-58911382 None:intergenic
AGTCATGGTTCACCTTCATT+TGG 0.300180 2_2:+58910727 Msa0260930:CDS
CCTCTAAATTTGCTAAGCTT+TGG 0.311164 2_2:+58911356 Msa0260930:CDS
CTCTAAATTTGCTAAGCTTT+GGG 0.314210 2_2:+58911357 Msa0260930:CDS
GGGCTAAAAGACGATCCTTT+TGG 0.322218 2_2:+58913947 Msa0260930:CDS
ATATTAGATGAGAATTTCTA+TGG 0.324299 2_2:-58910429 None:intergenic
AATTTCAGGGATTGATCTTA+AGG 0.332040 2_2:-58916591 None:intergenic
AATCTAAGTTCAAGATGAAA+TGG 0.333190 2_2:-58913811 None:intergenic
TTACTAGATGAGAATTTCTA+TGG 0.335545 2_2:-58910360 None:intergenic
TCATCACAAAAGTACCTAAA+AGG 0.337321 2_2:-58911418 None:intergenic
GACTTGAATATTGTAGATAA+AGG 0.350265 2_2:-58917744 None:intergenic
GCTAGTTGCACATATGAATA+TGG 0.351563 2_2:+58915559 Msa0260930:CDS
GTTAGAAGTGGGCTTGGGTA+TGG 0.365651 2_2:+58917633 Msa0260930:CDS
GTCATGGTTCACCTTCATTT+GGG 0.372598 2_2:+58910728 Msa0260930:CDS
ACGTCGGAGGATGTACTTAC+TGG 0.377151 2_2:+58916341 Msa0260930:CDS
TAGCCCATCATAGAATTGTT+GGG 0.385848 2_2:-58913930 None:intergenic
AACAAGGAAAATCTTCTAGA+TGG 0.388558 2_2:+58913237 Msa0260930:CDS
TATTAGGTGGGTTGGATGTA+TGG 0.390205 2_2:+58916314 Msa0260930:intron
CAAAATCCACTTCCTCTTGT+AGG 0.396542 2_2:+58911964 Msa0260930:CDS
TCAAGATTGGTTAAGAATGA+AGG 0.396673 2_2:+58911480 Msa0260930:CDS
TGAATCAGCTACTCATGCTT+TGG 0.404609 2_2:+58915474 Msa0260930:CDS
AAGGCGTGTAGAGCAATCTT+AGG 0.404777 2_2:-58913854 None:intergenic
CCCATAAAGGCCAATGGATC+TGG 0.407916 2_2:-58916407 None:intergenic
CTTTATTTGCAGGAGGAATA+CGG 0.409429 2_2:+58911910 Msa0260930:intron
TGGCTACTAGCTTATTTGGA+TGG 0.409969 2_2:+58917601 Msa0260930:CDS
TTGAGGTGAGCAACCCATAA+AGG 0.418402 2_2:-58916420 None:intergenic
TTAGAAGTGGGCTTGGGTAT+GGG 0.420566 2_2:+58917634 Msa0260930:CDS
TTCTGTGTTATTTCAAAGAC+AGG 0.422723 2_2:-58917483 None:intergenic
CATATGAATATGGCACTACC+TGG 0.424657 2_2:+58915569 Msa0260930:CDS
ATAGACCAATCATCTAATAC+TGG 0.425067 2_2:+58917507 Msa0260930:CDS
GGAGGGTTTGGAGGACTTCA+AGG 0.426521 2_2:+58914240 Msa0260930:CDS
GAGACGGTCTAGGTGGGTTA+TGG 0.429322 2_2:-58910787 None:intergenic
GTTAGATTCAAAAGGGGAAA+AGG 0.430851 2_2:+58913886 Msa0260930:CDS
GGTGACTTATACAGAAACTT+TGG 0.430921 2_2:+58917286 Msa0260930:intron
CTTCAATTTAGAGAGGCTCT+TGG 0.431777 2_2:+58916545 Msa0260930:CDS
GGTATATGCAGGACTCCATT+TGG 0.432589 2_2:-58910766 None:intergenic
TTTGCGTTGGTAGGTGATAT+GGG 0.433128 2_2:+58913212 Msa0260930:intron
TTGCATTTCTTTGTGAGTCA+TGG 0.435437 2_2:+58910712 Msa0260930:CDS
TTGGTCTTATTATAAATGTA+TGG 0.438331 2_2:+58910387 Msa0260930:five_prime_UTR
TGGGTCTTATTATAAATGTA+TGG 0.440728 2_2:+58910458 Msa0260930:five_prime_UTR
TTTAAAGGGTTGTTTGGGAC+TGG 0.442166 2_2:+58917708 Msa0260930:CDS
AGAAATTCTCATCTAGTAAG+AGG 0.444294 2_2:+58910364 Msa0260930:five_prime_UTR
AGTGGGCTTGGGTATGGGCC+TGG 0.446137 2_2:+58917639 Msa0260930:CDS
ACAAACAATATTGTTGTACT+AGG 0.447324 2_2:-58917564 None:intergenic
ACCTACCAGTATTAGATGAT+TGG 0.451041 2_2:-58917512 None:intergenic
GCATGCTATGTTTCTGATGA+TGG 0.451291 2_2:+58911298 Msa0260930:CDS
TTCAATTTAGAGAGGCTCTT+GGG 0.453068 2_2:+58916546 Msa0260930:CDS
TTAGCCCATCATAGAATTGT+TGG 0.455960 2_2:-58913931 None:intergenic
ACATGTGTTAGAAGTGGGCT+TGG 0.458461 2_2:+58917627 Msa0260930:CDS
TTCTCATCTAATATAAGAGT+TGG 0.460642 2_2:+58910438 Msa0260930:five_prime_UTR
TGGCACTACCTGGGGCAAAC+AGG 0.462432 2_2:+58915579 Msa0260930:CDS
GGCTACTAGCTTATTTGGAT+GGG 0.463515 2_2:+58917602 Msa0260930:CDS
AACCAATAAAGAAGGTGTAT+TGG 0.466671 2_2:+58910496 Msa0260930:five_prime_UTR
ACTTGAATATTGTAGATAAA+GGG 0.467674 2_2:-58917743 None:intergenic
AATTGTTGATATATAAAATA+CGG 0.468079 2_2:-58910671 None:intergenic
ACCTAGACCGTCTCTTGCTC+AGG 0.472803 2_2:+58910796 Msa0260930:CDS
AATGAACAGACAAGAGTCTC+TGG 0.476601 2_2:+58913773 Msa0260930:intron
TGACATTCAAAATAGAAAGA+AGG 0.480035 2_2:+58914329 Msa0260930:CDS
GTTGCTCACCTGTTTGCCCC+AGG 0.481439 2_2:-58915587 None:intergenic
TCAACAATTATCCCTTCCCT+TGG 0.482011 2_2:+58910685 Msa0260930:CDS
TGTCCCCAACAATTCTATGA+TGG 0.482390 2_2:+58913926 Msa0260930:CDS
CCAACAGAAAAGATGGGCCT+CGG 0.483981 2_2:+58916463 Msa0260930:CDS
GAATTACAACCATGAGTGCT+TGG 0.486763 2_2:+58917412 Msa0260930:CDS
GTTTGTTCAACTCACGGCAT+TGG 0.488199 2_2:+58917581 Msa0260930:CDS
GTATGATCCAACAGAAAAGA+TGG 0.488519 2_2:+58916456 Msa0260930:CDS
TCAGCTCGTGGCATTGTTTG+TGG 0.488717 2_2:+58913973 Msa0260930:CDS
GAATACAGTGTTGTCATTGT+TGG 0.488821 2_2:+58911249 Msa0260930:CDS
TCTCATCTAATATAAGAGTT+GGG 0.491508 2_2:+58910439 Msa0260930:five_prime_UTR
AATATTCAAGTCAGTGATGT+TGG 0.493755 2_2:+58917755 Msa0260930:CDS
CAACAGAAAAGATGGGCCTC+GGG 0.496023 2_2:+58916464 Msa0260930:CDS
ATCTAAGTTCAAGATGAAAT+GGG 0.497911 2_2:-58913810 None:intergenic
ACAAGAGCATAAAAGGTAAG+AGG 0.498591 2_2:-58911328 None:intergenic
GGAACATGAGCTTCCAGCAT+TGG 0.500405 2_2:+58911174 Msa0260930:CDS
TAGCATGCTAGCTTGTTAGC+TGG 0.502258 2_2:-58911283 None:intergenic
TCGTAATAACTTAAGTAAGA+TGG 0.506571 2_2:-58917451 None:intergenic
ATGATTGGTGGTTCTAGCAC+TGG 0.507268 2_2:-58911220 None:intergenic
GTCACAAACAAGTCCAATGC+TGG 0.507383 2_2:-58911187 None:intergenic
TGAATATGATCAATATGTAA+TGG 0.509211 2_2:-58917808 None:intergenic
TCTTATTATAAATGTATGGC+AGG 0.510401 2_2:+58910462 Msa0260930:five_prime_UTR
GTGTTACAGAGGTTATCAAT+AGG 0.513447 2_2:-58915514 None:intergenic
GACATTCAAAATAGAAAGAA+GGG 0.514197 2_2:+58914330 Msa0260930:CDS
TTGTTTGGGACTGGAAAGCA+TGG 0.516326 2_2:+58917717 Msa0260930:CDS
AACTCTCCTACAAGAGGAAG+TGG 0.516770 2_2:-58911970 None:intergenic
AATTTGTTATGCTGCTCTAC+CGG 0.516950 2_2:+58916610 Msa0260930:CDS
TTTATTTGCAGGAGGAATAC+GGG 0.517490 2_2:+58911911 Msa0260930:intron
AAATCATTCAACCATAATCA+AGG 0.521264 2_2:+58912020 Msa0260930:CDS
TTGTCACCATGAGCACCAAA+TGG 0.524190 2_2:+58910751 Msa0260930:CDS
ACAATATTGATTACTTACAT+TGG 0.525865 2_2:+58917935 Msa0260930:three_prime_UTR
TTCTCTGTTTGAGTTCAGCA+TGG 0.527374 2_2:+58910542 Msa0260930:exon
GAGCAGCATAACAAATTTCA+GGG 0.528408 2_2:-58916604 None:intergenic
GTATTCACTGTGATGATTGG+TGG 0.530639 2_2:-58911232 None:intergenic
AATATTGTTTGTTCAACTCA+CGG 0.534539 2_2:+58917575 Msa0260930:CDS
GTCCCCAACAATTCTATGAT+GGG 0.536384 2_2:+58913927 Msa0260930:CDS
CGTCGGAGGATGTACTTACT+GGG 0.541544 2_2:+58916342 Msa0260930:CDS
ACTGTATTCACTGTGATGAT+TGG 0.542353 2_2:-58911235 None:intergenic
GCACTACAAAACACTTCTCC+AGG 0.542423 2_2:-58917657 None:intergenic
AGCCCATCATAGAATTGTTG+GGG 0.545209 2_2:-58913929 None:intergenic
AGGTGGGTTATGGTATATGC+AGG 0.545615 2_2:-58910777 None:intergenic
ATATGAATATGGCACTACCT+GGG 0.547389 2_2:+58915570 Msa0260930:CDS
AGATCATCCGCATCAATACA+AGG 0.554788 2_2:+58913299 Msa0260930:CDS
TGAGTTGCAACCAATAAAGA+AGG 0.557598 2_2:+58910488 Msa0260930:five_prime_UTR
AATGTGTTCACCAGATCCAT+TGG 0.559636 2_2:+58916397 Msa0260930:CDS
ATACTTACTATGTTATCTTG+AGG 0.560218 2_2:-58916437 None:intergenic
AGGACTCCATTTGGTGCTCA+TGG 0.563071 2_2:-58910757 None:intergenic
CATGTGTTAGAAGTGGGCTT+GGG 0.563325 2_2:+58917628 Msa0260930:CDS
GCCACGAGCTGATTTCCAAA+AGG 0.563923 2_2:-58913962 None:intergenic
ATTCTCATCTAGTAAGAGGT+TGG 0.572454 2_2:+58910368 Msa0260930:five_prime_UTR
ACCTGAGCAAGAGACGGTCT+AGG 0.574024 2_2:-58910797 None:intergenic
CAAAGAAATGCAACAAACCA+AGG 0.575666 2_2:-58910702 None:intergenic
CATCCGCATCAATACAAGGC+TGG 0.577862 2_2:+58913303 Msa0260930:CDS
CAGGGTTGTCAATTAGAACA+TGG 0.583196 2_2:+58917367 Msa0260930:CDS
ATTGGACTTGTTTGTGACAA+CGG 0.583368 2_2:+58911192 Msa0260930:CDS
GTAGGTGATATGGGAGAACA+AGG 0.587119 2_2:+58913221 Msa0260930:intron
TATGATCCAACAGAAAAGAT+GGG 0.590541 2_2:+58916457 Msa0260930:CDS
AAATGCAACAAACCAAGGGA+AGG 0.591687 2_2:-58910697 None:intergenic
GGAGGATGTACTTACTGGGT+TGG 0.591734 2_2:+58916346 Msa0260930:CDS
TCAGCTACTCATGCTTTGGA+AGG 0.592900 2_2:+58915478 Msa0260930:CDS
TTTGTCCAATATAGTACTTG+GGG 0.593998 2_2:+58914217 Msa0260930:intron
GAGGGTTTGGAGGACTTCAA+GGG 0.594034 2_2:+58914241 Msa0260930:CDS
GGGCCACATGTGTTAGAAGT+GGG 0.595953 2_2:+58917622 Msa0260930:CDS
ATAGCGAACTCTCCTACAAG+AGG 0.596464 2_2:-58911976 None:intergenic
TGGACATTCATACAAGAGGA+TGG 0.599249 2_2:+58916366 Msa0260930:CDS
GAATGTCATGATCAGGACAA+AGG 0.600011 2_2:-58914314 None:intergenic
CATGGTGACAACCCAAATGA+AGG 0.605226 2_2:-58910739 None:intergenic
GAGCAACCCATAAAGGCCAA+TGG 0.606456 2_2:-58916413 None:intergenic
GAACTCAAACAGAGAAAACA+AGG 0.610570 2_2:-58910535 None:intergenic
TGGTAAGCTTCAATTTAGAG+AGG 0.615471 2_2:+58916538 Msa0260930:CDS
GAGAAGGAAGAGCAAAGTGA+AGG 0.620280 2_2:-58910634 None:intergenic
GGTAACCAAGAAGCAAGAGA+AGG 0.623101 2_2:-58910650 None:intergenic
CAGCCTCAAGAGTGTTACAG+AGG 0.625356 2_2:-58915525 None:intergenic
GGGTTGGACATTCATACAAG+AGG 0.630359 2_2:+58916362 Msa0260930:CDS
TGGGCCACATGTGTTAGAAG+TGG 0.635498 2_2:+58917621 Msa0260930:CDS
TTAGTCAGGATGCAATATGC+CGG 0.636798 2_2:-58916629 None:intergenic
TGTCCAATATAGTACTTGGG+GGG 0.637223 2_2:+58914219 Msa0260930:intron
TGAGCAAGAGACGGTCTAGG+TGG 0.637301 2_2:-58910794 None:intergenic
AATGCAACAAACCAAGGGAA+GGG 0.637404 2_2:-58910696 None:intergenic
CTAGATATGTAGATTATGTG+AGG 0.637541 2_2:-58913264 None:intergenic
TTGTCCAATATAGTACTTGG+GGG 0.639200 2_2:+58914218 Msa0260930:intron
TAACCTCTGTAACACTCTTG+AGG 0.642049 2_2:+58915522 Msa0260930:CDS
TATGAATATGGCACTACCTG+GGG 0.643954 2_2:+58915571 Msa0260930:CDS
CAATATACCTGAGCAAGAGA+CGG 0.643989 2_2:-58910803 None:intergenic
AAAGAAATGCAACAAACCAA+GGG 0.644998 2_2:-58910701 None:intergenic
GCACCAGCCTTGTATTGATG+CGG 0.651294 2_2:-58913306 None:intergenic
AAGGGTGATGATGTTGCCAA+CGG 0.654182 2_2:+58914348 Msa0260930:CDS
TGAATCTAACAAAATGCACA+AGG 0.655703 2_2:-58913873 None:intergenic
GAGCAAGAGACGGTCTAGGT+GGG 0.660296 2_2:-58910793 None:intergenic
GATGTATGGATCAACGTCGG+AGG 0.666581 2_2:+58916328 Msa0260930:CDS
ACCAATCATCTAATACTGGT+AGG 0.667119 2_2:+58917511 Msa0260930:CDS
TGTTTGGGACTGGAAAGCAT+GGG 0.669630 2_2:+58917718 Msa0260930:CDS
AAGCCCACTTCTAACACATG+TGG 0.670983 2_2:-58917625 None:intergenic
AACAGAAAAGATGGGCCTCG+GGG 0.692321 2_2:+58916465 Msa0260930:CDS
CTTCAAGGGATGCTATACGC+AGG 0.696937 2_2:+58914255 Msa0260930:CDS
TTGGATGTATGGATCAACGT+CGG 0.710703 2_2:+58916325 Msa0260930:CDS
GGTTGTCAATTAGAACATGG+TGG 0.736743 2_2:+58917370 Msa0260930:CDS
AACTCAAACAGAGAAAACAA+GGG 0.751923 2_2:-58910534 None:intergenic
TAGAGTATCAAACAACCCCG+AGG 0.765044 2_2:-58916480 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTAAATATTTTTTTT+GGG - chr2_2:58913019-58913038 None:intergenic 0.0%
!! AATTGTTGATATATAAAATA+CGG - chr2_2:58910674-58910693 None:intergenic 10.0%
!!! TTACAATTTTTTTCATTATA+GGG + chr2_2:58911153-58911172 Msa0260930:intron 10.0%
!!! AAAACTTATTTTATTGAAAA+TGG + chr2_2:58911589-58911608 Msa0260930:intron 10.0%
!!! TAATTGTTTTTCAATTTTTT+TGG - chr2_2:58912537-58912556 None:intergenic 10.0%
!!! AATAAAATGTTTTTAATCAA+TGG - chr2_2:58913615-58913634 None:intergenic 10.0%
!!! AAAATTAGTTTGAAAATATT+AGG + chr2_2:58914987-58915006 Msa0260930:intron 10.0%
!!! TAATGATTGAAAATTTTATA+AGG - chr2_2:58915727-58915746 None:intergenic 10.0%
!!! CAAAAATTAACTTTAAAATA+GGG - chr2_2:58915758-58915777 None:intergenic 10.0%
!!! ACAAAAATTAACTTTAAAAT+AGG - chr2_2:58915759-58915778 None:intergenic 10.0%
!!! AAAAAATTCTAATATTTTTG+GGG - chr2_2:58915834-58915853 None:intergenic 10.0%
!!! ATATGATTTTACTTTAAAAT+AGG + chr2_2:58916012-58916031 Msa0260930:intron 10.0%
!!! TATGATTTTACTTTAAAATA+GGG + chr2_2:58916013-58916032 Msa0260930:intron 10.0%
!! TATTGAAGAAATTAAATAAA+GGG - chr2_2:58916147-58916166 None:intergenic 10.0%
!! ATATTGAAGAAATTAAATAA+AGG - chr2_2:58916148-58916167 None:intergenic 10.0%
!!! TAGTCTTTTTTTAAAATATT+AGG + chr2_2:58916298-58916317 Msa0260930:intron 10.0%
!! TGAAGTTATTAAAAATAAAA+CGG + chr2_2:58917896-58917915 Msa0260930:three_prime_UTR 10.0%
!! AGTACATAATAAATAATACT+AGG - chr2_2:58911104-58911123 None:intergenic 15.0%
!!! CTTACAATTTTTTTCATTAT+AGG + chr2_2:58911152-58911171 Msa0260930:intron 15.0%
!!! TCATTCTTTTTTTTTTTGAA+GGG + chr2_2:58911808-58911827 Msa0260930:intron 15.0%
!!! TTTTCAATTTTTTTGGAAAA+AGG - chr2_2:58912530-58912549 None:intergenic 15.0%
!!! TCTATAAAGAAACTTTTTTT+GGG + chr2_2:58914176-58914195 Msa0260930:intron 15.0%
!! AAAAAGAACAATAAAGATAA+GGG - chr2_2:58914841-58914860 None:intergenic 15.0%
!! AAAAAAGAACAATAAAGATA+AGG - chr2_2:58914842-58914861 None:intergenic 15.0%
!!! AAAAAAAAAAGTACTACATA+TGG + chr2_2:58914961-58914980 Msa0260930:intron 15.0%
!! GAAAAGTTAGTATATTTATA+GGG - chr2_2:58915667-58915686 None:intergenic 15.0%
!!! AAATTTTCAATCATTACTTT+TGG + chr2_2:58915731-58915750 Msa0260930:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr2_2:58916044-58916063 Msa0260930:intron 15.0%
!!! TGAAAAGTTGATATATTTAT+AGG + chr2_2:58916103-58916122 Msa0260930:intron 15.0%
!!! GAAAAGTTGATATATTTATA+GGG + chr2_2:58916104-58916123 Msa0260930:intron 15.0%
!!! TCTTTTTTTAAAATATTAGG+TGG + chr2_2:58916301-58916320 Msa0260930:intron 15.0%
!!! CTTTTTTTAAAATATTAGGT+GGG + chr2_2:58916302-58916321 Msa0260930:intron 15.0%
!! TAGTATGTAATTATAATCTT+GGG - chr2_2:58916812-58916831 None:intergenic 15.0%
!!! AAGAAAATATACATAGTTTT+TGG - chr2_2:58917069-58917088 None:intergenic 15.0%
!!! TTGGTCTTATTATAAATGTA+TGG + chr2_2:58910387-58910406 Msa0260930:five_prime_UTR 20.0%
!! ATATTAGATGAGAATTTCTA+TGG - chr2_2:58910432-58910451 None:intergenic 20.0%
!!! ACAAAATTTTATCATAGAGA+GGG - chr2_2:58910584-58910603 None:intergenic 20.0%
!!! AACAAAATTTTATCATAGAG+AGG - chr2_2:58910585-58910604 None:intergenic 20.0%
!! ACATTGTATTTCTTACAAAA+AGG - chr2_2:58911385-58911404 None:intergenic 20.0%
!! TTAGTTAGAAGAAAAAAACT+TGG - chr2_2:58911634-58911653 None:intergenic 20.0%
!! AAAATTATTTGAACCTTCTA+TGG + chr2_2:58911698-58911717 Msa0260930:intron 20.0%
!!! CTCATTCTTTTTTTTTTTGA+AGG + chr2_2:58911807-58911826 Msa0260930:intron 20.0%
!! GATAAATGTCAAATAATTCA+AGG - chr2_2:58912213-58912232 None:intergenic 20.0%
!! ACTAATTCTGGTATTAAATA+TGG - chr2_2:58912263-58912282 None:intergenic 20.0%
!! AACAAAAATGAGTTATCAAA+TGG - chr2_2:58912646-58912665 None:intergenic 20.0%
!!! ATTTTGCATTGTTTGAAAAA+TGG - chr2_2:58912719-58912738 None:intergenic 20.0%
!! AGTGTACATGATTATAATTT+GGG - chr2_2:58912929-58912948 None:intergenic 20.0%
!! AAGTGTACATGATTATAATT+TGG - chr2_2:58912930-58912949 None:intergenic 20.0%
!!! TAAATATTTTTTTTGGGTGT+GGG - chr2_2:58913013-58913032 None:intergenic 20.0%
!!! TTAAATATTTTTTTTGGGTG+TGG - chr2_2:58913014-58913033 None:intergenic 20.0%
!! TATAGTTGATTACGATTTAT+TGG - chr2_2:58913500-58913519 None:intergenic 20.0%
!! GTAAAAACTAGTAGTAATAT+TGG - chr2_2:58914033-58914052 None:intergenic 20.0%
!!! ATTACTACTAGTTTTTACAT+TGG + chr2_2:58914035-58914054 Msa0260930:intron 20.0%
!!! AAATGTATATTACATTGACT+TGG - chr2_2:58914118-58914137 None:intergenic 20.0%
!!! GTCTATAAAGAAACTTTTTT+TGG + chr2_2:58914175-58914194 Msa0260930:intron 20.0%
!!! CATAAATTACTTTTCTTCTA+TGG - chr2_2:58914293-58914312 None:intergenic 20.0%
!! CATAGAAGAAAAGTAATTTA+TGG + chr2_2:58914291-58914310 Msa0260930:CDS 20.0%
!! TAGTTAATATAAATTACCGT+TGG - chr2_2:58914367-58914386 None:intergenic 20.0%
!!! TTATCTTTAGGAAAATTCTA+TGG + chr2_2:58914427-58914446 Msa0260930:intron 20.0%
!! TATTAGGAATTCTTAATTTC+AGG + chr2_2:58915003-58915022 Msa0260930:intron 20.0%
!!! ATTTGTCCTTTAAAAATTGA+AGG + chr2_2:58915355-58915374 Msa0260930:intron 20.0%
!!! TCTAAACCTTCAATTTTTAA+AGG - chr2_2:58915364-58915383 None:intergenic 20.0%
!!! TTGTTGAAATTTTTTAGAGA+TGG + chr2_2:58915420-58915439 Msa0260930:intron 20.0%
!! AACATAGACAATATATTCAA+AGG + chr2_2:58915607-58915626 Msa0260930:intron 20.0%
!!! TTAAGGGTTAAATATGTTTT+TGG + chr2_2:58915640-58915659 Msa0260930:intron 20.0%
!! CGAAAAGTTAGTATATTTAT+AGG - chr2_2:58915668-58915687 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr2_2:58916040-58916059 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr2_2:58916043-58916062 Msa0260930:intron 20.0%
!!! AAATTGAAGGAAAATTTTAG+AGG + chr2_2:58916072-58916091 Msa0260930:intron 20.0%
!!! AATTGAAGGAAAATTTTAGA+GGG + chr2_2:58916073-58916092 Msa0260930:intron 20.0%
!!! TAAAGGGTTAAATATGTTTT+TGG - chr2_2:58916131-58916150 None:intergenic 20.0%
!! AATATAATCTCTCAAATTCA+TGG + chr2_2:58916163-58916182 Msa0260930:intron 20.0%
!! GATCTAATATGTTCATATTA+TGG + chr2_2:58916220-58916239 Msa0260930:intron 20.0%
!! TGTAATAATATGTGTTAACT+TGG + chr2_2:58916256-58916275 Msa0260930:intron 20.0%
!! GTAATAATATGTGTTAACTT+GGG + chr2_2:58916257-58916276 Msa0260930:intron 20.0%
!! GTAGTATGTAATTATAATCT+TGG - chr2_2:58916813-58916832 None:intergenic 20.0%
!! TAACAAAAAAGATCAAGTAA+GGG - chr2_2:58917041-58917060 None:intergenic 20.0%
!! ATAACAAAAAAGATCAAGTA+AGG - chr2_2:58917042-58917061 None:intergenic 20.0%
!! CATTCAATTAATGATGTATA+TGG - chr2_2:58917182-58917201 None:intergenic 20.0%
!! TTTACTAATCGTTGTATAAA+TGG + chr2_2:58917265-58917284 Msa0260930:intron 20.0%
!! ACTTGAATATTGTAGATAAA+GGG - chr2_2:58917746-58917765 None:intergenic 20.0%
!! TGAATATGATCAATATGTAA+TGG - chr2_2:58917811-58917830 None:intergenic 20.0%
!!! ACAATATTGATTACTTACAT+TGG + chr2_2:58917935-58917954 Msa0260930:three_prime_UTR 20.0%
! TTACTAGATGAGAATTTCTA+TGG - chr2_2:58910363-58910382 None:intergenic 25.0%
! TTCTCATCTAATATAAGAGT+TGG + chr2_2:58910438-58910457 Msa0260930:five_prime_UTR 25.0%
! TCTCATCTAATATAAGAGTT+GGG + chr2_2:58910439-58910458 Msa0260930:five_prime_UTR 25.0%
!!! TGGGTCTTATTATAAATGTA+TGG + chr2_2:58910458-58910477 Msa0260930:five_prime_UTR 25.0%
! TCTTATTATAAATGTATGGC+AGG + chr2_2:58910391-58910410 Msa0260930:five_prime_UTR 25.0%
! ATTATGTACTATATGTAGCT+TGG + chr2_2:58911114-58911133 Msa0260930:intron 25.0%
! AACCAATCTTGATAAAATTC+TGG - chr2_2:58911472-58911491 None:intergenic 25.0%
!!! AACCTCTGTTTTTTTATATG+AGG + chr2_2:58911745-58911764 Msa0260930:intron 25.0%
! AACCTCATATAAAAAAACAG+AGG - chr2_2:58911750-58911769 None:intergenic 25.0%
!! GTAAAATTTGTTCATCAGAA+TGG - chr2_2:58911861-58911880 None:intergenic 25.0%
!!! TTTTTGTTGTCTTTATTTGC+AGG + chr2_2:58911900-58911919 Msa0260930:intron 25.0%
! AAATCATTCAACCATAATCA+AGG + chr2_2:58912020-58912039 Msa0260930:CDS 25.0%
! ATGGAAAATTATTGTCATGA+TGG - chr2_2:58912244-58912263 None:intergenic 25.0%
!! TTGTTATTATGGACTAATTC+TGG - chr2_2:58912275-58912294 None:intergenic 25.0%
!!! TCAAAAGAAGCTTGTTATTA+TGG - chr2_2:58912286-58912305 None:intergenic 25.0%
! AATATTGTGTTTGAGCTATT+TGG - chr2_2:58912362-58912381 None:intergenic 25.0%
! CTGAAATGTTATATTCAGAT+TGG - chr2_2:58912386-58912405 None:intergenic 25.0%
! AATAGACTGCAAAATGATTA+AGG + chr2_2:58912406-58912425 Msa0260930:intron 25.0%
! ATTGTTTGAAAAATGGTGTT+GGG - chr2_2:58912712-58912731 None:intergenic 25.0%
! TCAAACAATGCAAAATGATA+AGG + chr2_2:58912723-58912742 Msa0260930:intron 25.0%
! CAAACAATGCAAAATGATAA+GGG + chr2_2:58912724-58912743 Msa0260930:intron 25.0%
!! ATGGTAATAATTCCCTTTTA+TGG - chr2_2:58912789-58912808 None:intergenic 25.0%
! AAGGGAATTATTACCATAAA+AGG + chr2_2:58912792-58912811 Msa0260930:intron 25.0%
!! TCAAAAACAGTTTCCTTTTA+TGG - chr2_2:58912808-58912827 None:intergenic 25.0%
!!! TCCTTTTTCATATCTTTAAC+CGG + chr2_2:58912879-58912898 Msa0260930:intron 25.0%
!! AAGAACAAGATAACTTTTCA+TGG + chr2_2:58913114-58913133 Msa0260930:intron 25.0%
! TTAAAAATACAGCTTCCTTA+CGG + chr2_2:58913162-58913181 Msa0260930:intron 25.0%
!! CATGCATCATTTACATATTT+TGG - chr2_2:58913188-58913207 None:intergenic 25.0%
!!! ACATTTTTTTCGTTGTTGAT+AGG - chr2_2:58913429-58913448 None:intergenic 25.0%
!!! GAACGTTTTTTATAATCTGA+CGG + chr2_2:58913586-58913605 Msa0260930:intron 25.0%
! TCTGTTCATTATACAAATGA+TGG - chr2_2:58913763-58913782 None:intergenic 25.0%
! ATCTAAGTTCAAGATGAAAT+GGG - chr2_2:58913813-58913832 None:intergenic 25.0%
! AATCTAAGTTCAAGATGAAA+TGG - chr2_2:58913814-58913833 None:intergenic 25.0%
!! TGCATTTTGTTAGATTCAAA+AGG + chr2_2:58913878-58913897 Msa0260930:CDS 25.0%
!! GCATTTTGTTAGATTCAAAA+GGG + chr2_2:58913879-58913898 Msa0260930:CDS 25.0%
!! CATTTTGTTAGATTCAAAAG+GGG + chr2_2:58913880-58913899 Msa0260930:CDS 25.0%
! GTGAGTTAAAAAGTGAATTA+AGG - chr2_2:58914084-58914103 None:intergenic 25.0%
!! ATTTTGTCCAATATAGTACT+TGG + chr2_2:58914215-58914234 Msa0260930:intron 25.0%
!! TTTTGTCCAATATAGTACTT+GGG + chr2_2:58914216-58914235 Msa0260930:intron 25.0%
! TGACATTCAAAATAGAAAGA+AGG + chr2_2:58914329-58914348 Msa0260930:CDS 25.0%
! GACATTCAAAATAGAAAGAA+GGG + chr2_2:58914330-58914349 Msa0260930:CDS 25.0%
!! AAGCATTCTTTGTTATCTTT+AGG + chr2_2:58914415-58914434 Msa0260930:intron 25.0%
! TACTATAACATCAAAAATGC+AGG + chr2_2:58914485-58914504 Msa0260930:intron 25.0%
! ACTATAACATCAAAAATGCA+GGG + chr2_2:58914486-58914505 Msa0260930:intron 25.0%
! TGTTACACTTAAAACAAAGT+AGG - chr2_2:58914610-58914629 None:intergenic 25.0%
! ATTAGAATCCTGTAAATGAT+AGG + chr2_2:58915074-58915093 Msa0260930:intron 25.0%
!! TTACAATTTTATCAACCAAG+TGG + chr2_2:58915204-58915223 Msa0260930:intron 25.0%
! TTCGACTAAGAATCAAATTT+AGG - chr2_2:58915282-58915301 None:intergenic 25.0%
!!! AAATTTTTTAGAGATGGAAG+TGG + chr2_2:58915426-58915445 Msa0260930:intron 25.0%
!!! TCAAAGGCACATTTTATTTA+AGG + chr2_2:58915623-58915642 Msa0260930:intron 25.0%
!!! CAAAGGCACATTTTATTTAA+GGG + chr2_2:58915624-58915643 Msa0260930:intron 25.0%
! AGTTGAAGGAAAAATTTAGA+GGG - chr2_2:58915698-58915717 None:intergenic 25.0%
! AAGTTGAAGGAAAAATTTAG+AGG - chr2_2:58915699-58915718 None:intergenic 25.0%
! TTATAAGGACTAAAAGTTGA+AGG - chr2_2:58915712-58915731 None:intergenic 25.0%
! TTATAGGGACTAAAAATTGA+AGG + chr2_2:58916059-58916078 Msa0260930:intron 25.0%
!!! TTTTAAAATATTAGGTGGGT+TGG + chr2_2:58916306-58916325 Msa0260930:intron 25.0%
! ATACTTACTATGTTATCTTG+AGG - chr2_2:58916440-58916459 None:intergenic 25.0%
!!! GTATTTTTGGATCTTAAGTT+GGG + chr2_2:58916568-58916587 Msa0260930:CDS 25.0%
! ATGTGATGTTATCAAATATC+AGG - chr2_2:58916703-58916722 None:intergenic 25.0%
! TTATGAGTTCAAAATAGAGT+TGG - chr2_2:58916736-58916755 None:intergenic 25.0%
! TCGTAATAACTTAAGTAAGA+TGG - chr2_2:58917454-58917473 None:intergenic 25.0%
! GTTGTACTAGGTAAAAATAT+TGG - chr2_2:58917555-58917574 None:intergenic 25.0%
! ACAAACAATATTGTTGTACT+AGG - chr2_2:58917567-58917586 None:intergenic 25.0%
! AATATTGTTTGTTCAACTCA+CGG + chr2_2:58917575-58917594 Msa0260930:CDS 25.0%
!!! TGTTATTGGCCATTTTTTAA+AGG + chr2_2:58917693-58917712 Msa0260930:CDS 25.0%
!!! GTTATTGGCCATTTTTTAAA+GGG + chr2_2:58917694-58917713 Msa0260930:CDS 25.0%
!!! CATTTTTTAAAGGGTTGTTT+GGG + chr2_2:58917703-58917722 Msa0260930:CDS 25.0%
! GACTTGAATATTGTAGATAA+AGG - chr2_2:58917747-58917766 None:intergenic 25.0%
!! TTTGCATGATGTTTTCATAT+TGG + chr2_2:58917870-58917889 Msa0260930:three_prime_UTR 25.0%
AGAAATTCTCATCTAGTAAG+AGG + chr2_2:58910364-58910383 Msa0260930:five_prime_UTR 30.0%
! AACCAATAAAGAAGGTGTAT+TGG + chr2_2:58910496-58910515 Msa0260930:five_prime_UTR 30.0%
TACCAATACACCTTCTTTAT+TGG - chr2_2:58910501-58910520 None:intergenic 30.0%
AACTCAAACAGAGAAAACAA+GGG - chr2_2:58910537-58910556 None:intergenic 30.0%
!! ATACACATTTTCAAGAGTGA+TGG + chr2_2:58910608-58910627 Msa0260930:CDS 30.0%
AAAGAAATGCAACAAACCAA+GGG - chr2_2:58910704-58910723 None:intergenic 30.0%
!! GAGAATGAGCAATTTTGAAA+GGG - chr2_2:58910847-58910866 None:intergenic 30.0%
! AGAGAATGAGCAATTTTGAA+AGG - chr2_2:58910848-58910867 None:intergenic 30.0%
!!! CACGTTGACATTTTTAAGAT+CGG + chr2_2:58910919-58910938 Msa0260930:intron 30.0%
!! CTCTAAATTTGCTAAGCTTT+GGG + chr2_2:58911357-58911376 Msa0260930:CDS 30.0%
!! TCATCACAAAAGTACCTAAA+AGG - chr2_2:58911421-58911440 None:intergenic 30.0%
! CACCAGAATTTTATCAAGAT+TGG + chr2_2:58911467-58911486 Msa0260930:CDS 30.0%
! TCAAGATTGGTTAAGAATGA+AGG + chr2_2:58911480-58911499 Msa0260930:CDS 30.0%
TTGTTGAGAGTGAATTCATT+AGG + chr2_2:58911537-58911556 Msa0260930:intron 30.0%
!! TGAAAATGGTGCAGTTTTAT+TGG + chr2_2:58911603-58911622 Msa0260930:intron 30.0%
!!! GAAAATGGTGCAGTTTTATT+GGG + chr2_2:58911604-58911623 Msa0260930:intron 30.0%
ATCGTAATATGTGACACATA+AGG + chr2_2:58911653-58911672 Msa0260930:intron 30.0%
! CATTCTCAATTTTACTCTTG+AGG - chr2_2:58911939-58911958 None:intergenic 30.0%
CTTGATATGTACCTTGATTA+TGG - chr2_2:58912034-58912053 None:intergenic 30.0%
!! TAGTAGGTTTTGTATTGATG+TGG - chr2_2:58912134-58912153 None:intergenic 30.0%
! GATCTGAAAAAATTGGTAGT+AGG - chr2_2:58912150-58912169 None:intergenic 30.0%
TGTGCTTGATCTGAAAAAAT+TGG - chr2_2:58912157-58912176 None:intergenic 30.0%
GTGGAAATATATTCAATAGG+TGG - chr2_2:58912588-58912607 None:intergenic 30.0%
! GTGGTGGAAATATATTCAAT+AGG - chr2_2:58912591-58912610 None:intergenic 30.0%
TCATGAAAAATTTAGTGTGG+TGG - chr2_2:58912607-58912626 None:intergenic 30.0%
TATCAAATGGTATAGTGGTT+TGG - chr2_2:58912633-58912652 None:intergenic 30.0%
TGAGTTATCAAATGGTATAG+TGG - chr2_2:58912638-58912657 None:intergenic 30.0%
! TTGTTTGAAAAATGGTGTTG+GGG - chr2_2:58912711-58912730 None:intergenic 30.0%
CATTGTTTGAAAAATGGTGT+TGG - chr2_2:58912713-58912732 None:intergenic 30.0%
TGGTTAAGCATACCATAAAA+GGG + chr2_2:58912774-58912793 Msa0260930:intron 30.0%
ACCGGTTAAAGATATGAAAA+AGG - chr2_2:58912883-58912902 None:intergenic 30.0%
ATAATTTGGGAAATGCTAAC+TGG - chr2_2:58912916-58912935 None:intergenic 30.0%
! CTTTTCAAAGATGTCATGAT+TGG - chr2_2:58913097-58913116 None:intergenic 30.0%
!!! ATTTACATATTTTGGCCGTA+AGG - chr2_2:58913180-58913199 None:intergenic 30.0%
AACAAGGAAAATCTTCTAGA+TGG + chr2_2:58913237-58913256 Msa0260930:CDS 30.0%
CTAGATATGTAGATTATGTG+AGG - chr2_2:58913267-58913286 None:intergenic 30.0%
CATTGACACAATTGTATTCA+AGG - chr2_2:58913370-58913389 None:intergenic 30.0%
TGAATCTAACAAAATGCACA+AGG - chr2_2:58913876-58913895 None:intergenic 30.0%
!! TGTATATTACATTGACTTGG+TGG - chr2_2:58914115-58914134 None:intergenic 30.0%
TTTGTCCAATATAGTACTTG+GGG + chr2_2:58914217-58914236 Msa0260930:intron 30.0%
!! CTATTTTGAATGTCATGATC+AGG - chr2_2:58914324-58914343 None:intergenic 30.0%
! AGTCATGAAAATGACTTTTC+TGG + chr2_2:58914453-58914472 Msa0260930:intron 30.0%
! GATGAATTGATGATACTATG+AGG - chr2_2:58914554-58914573 None:intergenic 30.0%
!!! AGTTAGGAAACTGACTTTTT+TGG - chr2_2:58914804-58914823 None:intergenic 30.0%
TATGATCCAACAGAAAAGAT+GGG + chr2_2:58916457-58916476 Msa0260930:CDS 30.0%
!!! GGTATTTTTGGATCTTAAGT+TGG + chr2_2:58916567-58916586 Msa0260930:CDS 30.0%
AATTTCAGGGATTGATCTTA+AGG - chr2_2:58916594-58916613 None:intergenic 30.0%
CTTATATTAAATACACCCTC+CGG + chr2_2:58917086-58917105 Msa0260930:intron 30.0%
! GTTTTGCTTATAATAGTGAC+CGG - chr2_2:58917217-58917236 None:intergenic 30.0%
! GTTTTGCTTATAATAGTGAC+CGG + chr2_2:58917217-58917236 Msa0260930:intron 30.0%
ATATCAGAGAGCTTAAAAAC+AGG + chr2_2:58917348-58917367 Msa0260930:CDS 30.0%
TATCAGAGAGCTTAAAAACA+GGG + chr2_2:58917349-58917368 Msa0260930:CDS 30.0%
!! TTCTGTGTTATTTCAAAGAC+AGG - chr2_2:58917486-58917505 None:intergenic 30.0%
ATAGACCAATCATCTAATAC+TGG + chr2_2:58917507-58917526 Msa0260930:CDS 30.0%
CTTACTTAGTTGCATGTTAT+TGG + chr2_2:58917679-58917698 Msa0260930:CDS 30.0%
! CCAAACAACCCTTTAAAAAA+TGG - chr2_2:58917705-58917724 None:intergenic 30.0%
!!! CCATTTTTTAAAGGGTTGTT+TGG + chr2_2:58917702-58917721 Msa0260930:CDS 30.0%
AATATTCAAGTCAGTGATGT+TGG + chr2_2:58917755-58917774 Msa0260930:CDS 30.0%
ATTCTCATCTAGTAAGAGGT+TGG + chr2_2:58910368-58910387 Msa0260930:five_prime_UTR 35.0%
TGAGTTGCAACCAATAAAGA+AGG + chr2_2:58910488-58910507 Msa0260930:five_prime_UTR 35.0%
GAACTCAAACAGAGAAAACA+AGG - chr2_2:58910538-58910557 None:intergenic 35.0%
! TTTTATCATAGAGAGGGAGA+GGG - chr2_2:58910578-58910597 None:intergenic 35.0%
! ATTTTATCATAGAGAGGGAG+AGG - chr2_2:58910579-58910598 None:intergenic 35.0%
CAAAGAAATGCAACAAACCA+AGG - chr2_2:58910705-58910724 None:intergenic 35.0%
TTGCATTTCTTTGTGAGTCA+TGG + chr2_2:58910712-58910731 Msa0260930:CDS 35.0%
!!! GTTCAATCGCTTTTTAAGTC+GGG - chr2_2:58910949-58910968 None:intergenic 35.0%
!!! GGTTCAATCGCTTTTTAAGT+CGG - chr2_2:58910950-58910969 None:intergenic 35.0%
GACTTAAAAAGCGATTGAAC+CGG + chr2_2:58910949-58910968 Msa0260930:intron 35.0%
!!! CACGCTGATATTTTTTAGAC+CGG - chr2_2:58910971-58910990 None:intergenic 35.0%
! TGTAGCTTGGTGAAATATTG+TGG + chr2_2:58911127-58911146 Msa0260930:intron 35.0%
! ATTGGACTTGTTTGTGACAA+CGG + chr2_2:58911192-58911211 Msa0260930:CDS 35.0%
ACTGTATTCACTGTGATGAT+TGG - chr2_2:58911238-58911257 None:intergenic 35.0%
GAATACAGTGTTGTCATTGT+TGG + chr2_2:58911249-58911268 Msa0260930:CDS 35.0%
! ACAAGAGCATAAAAGGTAAG+AGG - chr2_2:58911331-58911350 None:intergenic 35.0%
! TCTTACCTTTTATGCTCTTG+TGG + chr2_2:58911330-58911349 Msa0260930:CDS 35.0%
CCAAAGCTTAGCAAATTTAG+AGG - chr2_2:58911359-58911378 None:intergenic 35.0%
!! CCTCTAAATTTGCTAAGCTT+TGG + chr2_2:58911356-58911375 Msa0260930:CDS 35.0%
! GAGATGATTAGTTCCATAGA+AGG - chr2_2:58911714-58911733 None:intergenic 35.0%
AACTAATCATCTCGTCAACA+AGG + chr2_2:58911721-58911740 Msa0260930:intron 35.0%
GTTAGAAGAGTTCGTAAAAC+AGG - chr2_2:58911837-58911856 None:intergenic 35.0%
! TTGTTGTCTTTATTTGCAGG+AGG + chr2_2:58911903-58911922 Msa0260930:intron 35.0%
! CTTTATTTGCAGGAGGAATA+CGG + chr2_2:58911910-58911929 Msa0260930:intron 35.0%
TTTATTTGCAGGAGGAATAC+GGG + chr2_2:58911911-58911930 Msa0260930:intron 35.0%
GATCATGCTCAATAGTTTGA+TGG - chr2_2:58912437-58912456 None:intergenic 35.0%
! TTTTGGCATTATGCTTGAGT+AGG - chr2_2:58912476-58912495 None:intergenic 35.0%
TACTCAAGCATAATGCCAAA+AGG + chr2_2:58912475-58912494 Msa0260930:intron 35.0%
AAGGTTATTGATCCTTGAGT+GGG - chr2_2:58912511-58912530 None:intergenic 35.0%
AAAGGTTATTGATCCTTGAG+TGG - chr2_2:58912512-58912531 None:intergenic 35.0%
CGCTCATGAAAAATTTAGTG+TGG - chr2_2:58912610-58912629 None:intergenic 35.0%
! TGTTTGAAAAATGGTGTTGG+GGG - chr2_2:58912710-58912729 None:intergenic 35.0%
GTGGTTAAGCATACCATAAA+AGG + chr2_2:58912773-58912792 Msa0260930:intron 35.0%
GTCTTACAAAAGCAAAAGGT+AGG - chr2_2:58912955-58912974 None:intergenic 35.0%
GTGTGTCTTACAAAAGCAAA+AGG - chr2_2:58912959-58912978 None:intergenic 35.0%
!!! TATTTTTTTTGGGTGTGGGT+GGG - chr2_2:58913009-58913028 None:intergenic 35.0%
!!! ATATTTTTTTTGGGTGTGGG+TGG - chr2_2:58913010-58913029 None:intergenic 35.0%
GTTAGATTCAAAAGGGGAAA+AGG + chr2_2:58913886-58913905 Msa0260930:CDS 35.0%
TAGCCCATCATAGAATTGTT+GGG - chr2_2:58913933-58913952 None:intergenic 35.0%
TTAGCCCATCATAGAATTGT+TGG - chr2_2:58913934-58913953 None:intergenic 35.0%
TTGTCCAATATAGTACTTGG+GGG + chr2_2:58914218-58914237 Msa0260930:intron 35.0%
ATGTCATTGTACAAACAGTG+GGG - chr2_2:58914519-58914538 None:intergenic 35.0%
GATGTCATTGTACAAACAGT+GGG - chr2_2:58914520-58914539 None:intergenic 35.0%
TGATGTCATTGTACAAACAG+TGG - chr2_2:58914521-58914540 None:intergenic 35.0%
! TCTGAAGTGTTACACTTTGT+GGG - chr2_2:58914634-58914653 None:intergenic 35.0%
! TACAGGTACTATTTTATCGC+TGG - chr2_2:58914699-58914718 None:intergenic 35.0%
TAGTAATGCTTGCAACATCT+TGG - chr2_2:58914725-58914744 None:intergenic 35.0%
TAAAGATAAGGGAGCTTCTA+TGG - chr2_2:58914830-58914849 None:intergenic 35.0%
AGAATCCTGTAAATGATAGG+TGG + chr2_2:58915077-58915096 Msa0260930:intron 35.0%
! TTTTGTGATGTCAGCATAGT+TGG + chr2_2:58915103-58915122 Msa0260930:intron 35.0%
TTTGTGATGTCAGCATAGTT+GGG + chr2_2:58915104-58915123 Msa0260930:intron 35.0%
TTAGAGATGGAAGTGGTATT+TGG + chr2_2:58915433-58915452 Msa0260930:intron 35.0%
GTGTTACAGAGGTTATCAAT+AGG - chr2_2:58915517-58915536 None:intergenic 35.0%
GCTAGTTGCACATATGAATA+TGG + chr2_2:58915559-58915578 Msa0260930:CDS 35.0%
ATATGAATATGGCACTACCT+GGG + chr2_2:58915570-58915589 Msa0260930:CDS 35.0%
GTATGATCCAACAGAAAAGA+TGG + chr2_2:58916456-58916475 Msa0260930:CDS 35.0%
!! AGCAAGCACAATCCATTTTT+GGG + chr2_2:58916506-58916525 Msa0260930:CDS 35.0%
TGGTAAGCTTCAATTTAGAG+AGG + chr2_2:58916538-58916557 Msa0260930:CDS 35.0%
TTCAATTTAGAGAGGCTCTT+GGG + chr2_2:58916546-58916565 Msa0260930:CDS 35.0%
GAGCAGCATAACAAATTTCA+GGG - chr2_2:58916607-58916626 None:intergenic 35.0%
AGAGCAGCATAACAAATTTC+AGG - chr2_2:58916608-58916627 None:intergenic 35.0%
!! AATTTGTTATGCTGCTCTAC+CGG + chr2_2:58916610-58916629 Msa0260930:CDS 35.0%
! TTATGTTTTGTACTCACCTC+TGG - chr2_2:58916668-58916687 None:intergenic 35.0%
TGAACCAAAATGTGCTTGTA+TGG + chr2_2:58916936-58916955 Msa0260930:intron 35.0%
! TGTACCATACAAGCACATTT+TGG - chr2_2:58916943-58916962 None:intergenic 35.0%
AGTAAATTAGTTACACCCTC+CGG - chr2_2:58917239-58917258 None:intergenic 35.0%
GGTGACTTATACAGAAACTT+TGG + chr2_2:58917286-58917305 Msa0260930:intron 35.0%
ACCAATCATCTAATACTGGT+AGG + chr2_2:58917511-58917530 Msa0260930:CDS 35.0%
ACCTACCAGTATTAGATGAT+TGG - chr2_2:58917515-58917534 None:intergenic 35.0%
! TTCTCTGTTTGAGTTCAGCA+TGG + chr2_2:58910542-58910561 Msa0260930:exon 40.0%
TCAACAATTATCCCTTCCCT+TGG + chr2_2:58910685-58910704 Msa0260930:CDS 40.0%
AATGCAACAAACCAAGGGAA+GGG - chr2_2:58910699-58910718 None:intergenic 40.0%
AAATGCAACAAACCAAGGGA+AGG - chr2_2:58910700-58910719 None:intergenic 40.0%
AGTCATGGTTCACCTTCATT+TGG + chr2_2:58910727-58910746 Msa0260930:CDS 40.0%
GTCATGGTTCACCTTCATTT+GGG + chr2_2:58910728-58910747 Msa0260930:CDS 40.0%
CAATATACCTGAGCAAGAGA+CGG - chr2_2:58910806-58910825 None:intergenic 40.0%
TGCTCATTCTCTTAACTCAG+TGG + chr2_2:58910856-58910875 Msa0260930:intron 40.0%
GCTCATTCTCTTAACTCAGT+GGG + chr2_2:58910857-58910876 Msa0260930:intron 40.0%
!! TCACGTTCGGTATTTTTCAG+CGG + chr2_2:58910887-58910906 Msa0260930:intron 40.0%
GTATTCACTGTGATGATTGG+TGG - chr2_2:58911235-58911254 None:intergenic 40.0%
! GCATGCTATGTTTCTGATGA+TGG + chr2_2:58911298-58911317 Msa0260930:CDS 40.0%
!! TGCAAGTTAGAGCACCTTTT+AGG + chr2_2:58911404-58911423 Msa0260930:CDS 40.0%
CAAAATCCACTTCCTCTTGT+AGG + chr2_2:58911964-58911983 Msa0260930:CDS 40.0%
TTATTGATCCTTGAGTGGGA+TGG - chr2_2:58912507-58912526 None:intergenic 40.0%
! CCATTGGGTTAGATGATATC+AGG - chr2_2:58912981-58913000 None:intergenic 40.0%
CCTGATATCATCTAACCCAA+TGG + chr2_2:58912978-58912997 Msa0260930:intron 40.0%
!!! ATTTTTTTTGGGTGTGGGTG+GGG - chr2_2:58913008-58913027 None:intergenic 40.0%
! TTTGCGTTGGTAGGTGATAT+GGG + chr2_2:58913212-58913231 Msa0260930:intron 40.0%
AGATCATCCGCATCAATACA+AGG + chr2_2:58913299-58913318 Msa0260930:CDS 40.0%
AATGAACAGACAAGAGTCTC+TGG + chr2_2:58913773-58913792 Msa0260930:intron 40.0%
TGTCCCCAACAATTCTATGA+TGG + chr2_2:58913926-58913945 Msa0260930:CDS 40.0%
GTCCCCAACAATTCTATGAT+GGG + chr2_2:58913927-58913946 Msa0260930:CDS 40.0%
AGCCCATCATAGAATTGTTG+GGG - chr2_2:58913932-58913951 None:intergenic 40.0%
TGTCCAATATAGTACTTGGG+GGG + chr2_2:58914219-58914238 Msa0260930:intron 40.0%
GAATGTCATGATCAGGACAA+AGG - chr2_2:58914317-58914336 None:intergenic 40.0%
! CTGAAGTGTTACACTTTGTG+GGG - chr2_2:58914633-58914652 None:intergenic 40.0%
! GTCTGAAGTGTTACACTTTG+TGG - chr2_2:58914635-58914654 None:intergenic 40.0%
TTATCGCTGGCATCTTTAAC+AGG - chr2_2:58914686-58914705 None:intergenic 40.0%
TTGCAACATCTTGGACTTAC+AGG - chr2_2:58914716-58914735 None:intergenic 40.0%
AATGCGCATGTACACACTTA+TGG - chr2_2:58914865-58914884 None:intergenic 40.0%
AACTGCCACCTATCATTTAC+AGG - chr2_2:58915085-58915104 None:intergenic 40.0%
TGAATCAGCTACTCATGCTT+TGG + chr2_2:58915474-58915493 Msa0260930:CDS 40.0%
TAACCTCTGTAACACTCTTG+AGG + chr2_2:58915522-58915541 Msa0260930:CDS 40.0%
CATATGAATATGGCACTACC+TGG + chr2_2:58915569-58915588 Msa0260930:CDS 40.0%
TATGAATATGGCACTACCTG+GGG + chr2_2:58915571-58915590 Msa0260930:CDS 40.0%
!! TATTAGGTGGGTTGGATGTA+TGG + chr2_2:58916314-58916333 Msa0260930:intron 40.0%
TTGGATGTATGGATCAACGT+CGG + chr2_2:58916325-58916344 Msa0260930:CDS 40.0%
TGGACATTCATACAAGAGGA+TGG + chr2_2:58916366-58916385 Msa0260930:CDS 40.0%
AATGTGTTCACCAGATCCAT+TGG + chr2_2:58916397-58916416 Msa0260930:CDS 40.0%
! GAGCAAGCACAATCCATTTT+TGG + chr2_2:58916505-58916524 Msa0260930:CDS 40.0%
CCATAGAGAAAGCCCAAAAA+TGG - chr2_2:58916521-58916540 None:intergenic 40.0%
!! CCATTTTTGGGCTTTCTCTA+TGG + chr2_2:58916518-58916537 Msa0260930:CDS 40.0%
CTTCAATTTAGAGAGGCTCT+TGG + chr2_2:58916545-58916564 Msa0260930:CDS 40.0%
TTAGTCAGGATGCAATATGC+CGG - chr2_2:58916632-58916651 None:intergenic 40.0%
GCAAAAAGTTGGAGTTAGTC+AGG - chr2_2:58916646-58916665 None:intergenic 40.0%
! TAACTCCAACTTTTTGCCAG+AGG + chr2_2:58916649-58916668 Msa0260930:CDS 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr2_2:58917221-58917240 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr2_2:58917220-58917239 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr2_2:58917220-58917239 Msa0260930:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr2_2:58917221-58917240 Msa0260930:intron 40.0%
CAGGGTTGTCAATTAGAACA+TGG + chr2_2:58917367-58917386 Msa0260930:CDS 40.0%
GGTTGTCAATTAGAACATGG+TGG + chr2_2:58917370-58917389 Msa0260930:CDS 40.0%
GAATTACAACCATGAGTGCT+TGG + chr2_2:58917412-58917431 Msa0260930:CDS 40.0%
!!! ACCATGAGTGCTTGGTTTTT+TGG + chr2_2:58917420-58917439 Msa0260930:CDS 40.0%
TCCAAAAAACCAAGCACTCA+TGG - chr2_2:58917424-58917443 None:intergenic 40.0%
!! GCATTGGCTACTAGCTTATT+TGG + chr2_2:58917597-58917616 Msa0260930:CDS 40.0%
! TGGCTACTAGCTTATTTGGA+TGG + chr2_2:58917601-58917620 Msa0260930:CDS 40.0%
! GGCTACTAGCTTATTTGGAT+GGG + chr2_2:58917602-58917621 Msa0260930:CDS 40.0%
! TTTAAAGGGTTGTTTGGGAC+TGG + chr2_2:58917708-58917727 Msa0260930:CDS 40.0%
GAGAAGGAAGAGCAAAGTGA+AGG - chr2_2:58910637-58910656 None:intergenic 45.0%
CTCTTCCTTCTCTTGCTTCT+TGG + chr2_2:58910645-58910664 Msa0260930:CDS 45.0%
GGTAACCAAGAAGCAAGAGA+AGG - chr2_2:58910653-58910672 None:intergenic 45.0%
CATGGTGACAACCCAAATGA+AGG - chr2_2:58910742-58910761 None:intergenic 45.0%
TTGTCACCATGAGCACCAAA+TGG + chr2_2:58910751-58910770 Msa0260930:CDS 45.0%
GGTATATGCAGGACTCCATT+TGG - chr2_2:58910769-58910788 None:intergenic 45.0%
!! AGGTGGGTTATGGTATATGC+AGG - chr2_2:58910780-58910799 None:intergenic 45.0%
AGTGGGAGTTAACTCACGTT+CGG + chr2_2:58910874-58910893 Msa0260930:intron 45.0%
GTCACAAACAAGTCCAATGC+TGG - chr2_2:58911190-58911209 None:intergenic 45.0%
!! ATGATTGGTGGTTCTAGCAC+TGG - chr2_2:58911223-58911242 None:intergenic 45.0%
!! TAGCATGCTAGCTTGTTAGC+TGG - chr2_2:58911286-58911305 None:intergenic 45.0%
! GGCTTCCACAAGAGCATAAA+AGG - chr2_2:58911338-58911357 None:intergenic 45.0%
AACTCTCCTACAAGAGGAAG+TGG - chr2_2:58911973-58911992 None:intergenic 45.0%
ATAGCGAACTCTCCTACAAG+AGG - chr2_2:58911979-58911998 None:intergenic 45.0%
! AGTAGGAGGTGTGGTGTAAA+GGG - chr2_2:58912459-58912478 None:intergenic 45.0%
TTATGCTTGAGTAGGAGGTG+TGG - chr2_2:58912468-58912487 None:intergenic 45.0%
TGGCATTATGCTTGAGTAGG+AGG - chr2_2:58912473-58912492 None:intergenic 45.0%
! GTGGGATGGTTTCATCCTTT+TGG - chr2_2:58912493-58912512 None:intergenic 45.0%
! AAAATGGTGTTGGGGGTTTG+AGG - chr2_2:58912703-58912722 None:intergenic 45.0%
ATGATAAGGGTCCTGCTAAC+TGG + chr2_2:58912737-58912756 Msa0260930:intron 45.0%
TCATATCTTTAACCGGTGCC+CGG + chr2_2:58912886-58912905 Msa0260930:intron 45.0%
TGATGCATGCTTCTTTGCGT+TGG + chr2_2:58913199-58913218 Msa0260930:intron 45.0%
! CTTTGCGTTGGTAGGTGATA+TGG + chr2_2:58913211-58913230 Msa0260930:intron 45.0%
GTAGGTGATATGGGAGAACA+AGG + chr2_2:58913221-58913240 Msa0260930:intron 45.0%
AAGGCGTGTAGAGCAATCTT+AGG - chr2_2:58913857-58913876 None:intergenic 45.0%
! GGGCTAAAAGACGATCCTTT+TGG + chr2_2:58913947-58913966 Msa0260930:CDS 45.0%
!! TCCTTTTGGAAATCAGCTCG+TGG + chr2_2:58913961-58913980 Msa0260930:CDS 45.0%
CAATATAGTACTTGGGGGGA+GGG + chr2_2:58914223-58914242 Msa0260930:intron 45.0%
! AAGGGTGATGATGTTGCCAA+CGG + chr2_2:58914348-58914367 Msa0260930:CDS 45.0%
ACCAAGTGGTTGACTACAGA+TGG + chr2_2:58915218-58915237 Msa0260930:intron 45.0%
ACCATCTGTAGTCAACCACT+TGG - chr2_2:58915222-58915241 None:intergenic 45.0%
! TCAGCTACTCATGCTTTGGA+AGG + chr2_2:58915478-58915497 Msa0260930:CDS 45.0%
GGGTTGGACATTCATACAAG+AGG + chr2_2:58916362-58916381 Msa0260930:CDS 45.0%
!! ACCAGATCCATTGGCCTTTA+TGG + chr2_2:58916406-58916425 Msa0260930:CDS 45.0%
!! CCAGATCCATTGGCCTTTAT+GGG + chr2_2:58916407-58916426 Msa0260930:CDS 45.0%
TTGAGGTGAGCAACCCATAA+AGG - chr2_2:58916423-58916442 None:intergenic 45.0%
! TAGAGTATCAAACAACCCCG+AGG - chr2_2:58916483-58916502 None:intergenic 45.0%
! GAGAGGCTCTTGGGTATTTT+TGG + chr2_2:58916555-58916574 Msa0260930:CDS 45.0%
ACTCACCTCTGGCAAAAAGT+TGG - chr2_2:58916657-58916676 None:intergenic 45.0%
GTTTGTTCAACTCACGGCAT+TGG + chr2_2:58917581-58917600 Msa0260930:CDS 45.0%
AAGCCCACTTCTAACACATG+TGG - chr2_2:58917628-58917647 None:intergenic 45.0%
! ACATGTGTTAGAAGTGGGCT+TGG + chr2_2:58917627-58917646 Msa0260930:CDS 45.0%
! CATGTGTTAGAAGTGGGCTT+GGG + chr2_2:58917628-58917647 Msa0260930:CDS 45.0%
! TTAGAAGTGGGCTTGGGTAT+GGG + chr2_2:58917634-58917653 Msa0260930:CDS 45.0%
GCACTACAAAACACTTCTCC+AGG - chr2_2:58917660-58917679 None:intergenic 45.0%
! TTGTTTGGGACTGGAAAGCA+TGG + chr2_2:58917717-58917736 Msa0260930:CDS 45.0%
! TGTTTGGGACTGGAAAGCAT+GGG + chr2_2:58917718-58917737 Msa0260930:CDS 45.0%
!!! CTTTATTTAAATATTTTTTT+TGG - chr2_2:58913020-58913039 None:intergenic 5.0%
!!! TTTTTTTATATAAAATCATA+TGG - chr2_2:58914946-58914965 None:intergenic 5.0%
!!! TAAAAAATTCTAATATTTTT+GGG - chr2_2:58915835-58915854 None:intergenic 5.0%
!!! TTAAAAAATTCTAATATTTT+TGG - chr2_2:58915836-58915855 None:intergenic 5.0%
!!! ATGAATTTTAATATTTTTTA+TGG - chr2_2:58915888-58915907 None:intergenic 5.0%
!!! TAAAAAATTCTAAATTTTTT+TGG + chr2_2:58915926-58915945 Msa0260930:intron 5.0%
!!! AAAAAATTCTAAATTTTTTT+GGG + chr2_2:58915927-58915946 Msa0260930:intron 5.0%
!! GAGAGGGAGAGGGTTTTGAT+TGG - chr2_2:58910568-58910587 None:intergenic 50.0%
!! AGGACTCCATTTGGTGCTCA+TGG - chr2_2:58910760-58910779 None:intergenic 50.0%
AGTTAACTCCCGCTGGATCA+AGG + chr2_2:58910991-58911010 Msa0260930:intron 50.0%
GTTAACTCCCGCTGGATCAA+GGG + chr2_2:58910992-58911011 Msa0260930:intron 50.0%
TGCTCATTCCCTTGATCCAG+CGG - chr2_2:58911003-58911022 None:intergenic 50.0%
GGAACATGAGCTTCCAGCAT+TGG + chr2_2:58911174-58911193 Msa0260930:CDS 50.0%
! GAGTAGGAGGTGTGGTGTAA+AGG - chr2_2:58912460-58912479 None:intergenic 50.0%
GGATGAAACCATCCCACTCA+AGG + chr2_2:58912496-58912515 Msa0260930:intron 50.0%
CATATCTTTAACCGGTGCCC+GGG + chr2_2:58912887-58912906 Msa0260930:intron 50.0%
ATATCTTTAACCGGTGCCCG+GGG + chr2_2:58912888-58912907 Msa0260930:intron 50.0%
! GCATGCTTCTTTGCGTTGGT+AGG + chr2_2:58913203-58913222 Msa0260930:intron 50.0%
CATCCGCATCAATACAAGGC+TGG + chr2_2:58913303-58913322 Msa0260930:CDS 50.0%
! GCACCAGCCTTGTATTGATG+CGG - chr2_2:58913309-58913328 None:intergenic 50.0%
! GCCACGAGCTGATTTCCAAA+AGG - chr2_2:58913965-58913984 None:intergenic 50.0%
TCAGCTCGTGGCATTGTTTG+TGG + chr2_2:58913973-58913992 Msa0260930:CDS 50.0%
CCTCCCCCCAAGTACTATAT+TGG - chr2_2:58914225-58914244 None:intergenic 50.0%
CCAATATAGTACTTGGGGGG+AGG + chr2_2:58914222-58914241 Msa0260930:intron 50.0%
GAGGGTTTGGAGGACTTCAA+GGG + chr2_2:58914241-58914260 Msa0260930:CDS 50.0%
CTTCAAGGGATGCTATACGC+AGG + chr2_2:58914255-58914274 Msa0260930:CDS 50.0%
GGAGCTTCTATGGTGCAGTT+AGG - chr2_2:58914820-58914839 None:intergenic 50.0%
!! CAGCCTCAAGAGTGTTACAG+AGG - chr2_2:58915528-58915547 None:intergenic 50.0%
GATGTATGGATCAACGTCGG+AGG + chr2_2:58916328-58916347 Msa0260930:CDS 50.0%
ACGTCGGAGGATGTACTTAC+TGG + chr2_2:58916341-58916360 Msa0260930:CDS 50.0%
CGTCGGAGGATGTACTTACT+GGG + chr2_2:58916342-58916361 Msa0260930:CDS 50.0%
GGAGGATGTACTTACTGGGT+TGG + chr2_2:58916346-58916365 Msa0260930:CDS 50.0%
CCCATAAAGGCCAATGGATC+TGG - chr2_2:58916410-58916429 None:intergenic 50.0%
GAGCAACCCATAAAGGCCAA+TGG - chr2_2:58916416-58916435 None:intergenic 50.0%
CCAACAGAAAAGATGGGCCT+CGG + chr2_2:58916463-58916482 Msa0260930:CDS 50.0%
CAACAGAAAAGATGGGCCTC+GGG + chr2_2:58916464-58916483 Msa0260930:CDS 50.0%
AACAGAAAAGATGGGCCTCG+GGG + chr2_2:58916465-58916484 Msa0260930:CDS 50.0%
TGGGCCACATGTGTTAGAAG+TGG + chr2_2:58917621-58917640 Msa0260930:CDS 50.0%
GGGCCACATGTGTTAGAAGT+GGG + chr2_2:58917622-58917641 Msa0260930:CDS 50.0%
! GTTAGAAGTGGGCTTGGGTA+TGG + chr2_2:58917633-58917652 Msa0260930:CDS 50.0%
!! GAGACGGTCTAGGTGGGTTA+TGG - chr2_2:58910790-58910809 None:intergenic 55.0%
GAGCAAGAGACGGTCTAGGT+GGG - chr2_2:58910796-58910815 None:intergenic 55.0%
TGAGCAAGAGACGGTCTAGG+TGG - chr2_2:58910797-58910816 None:intergenic 55.0%
ACCTAGACCGTCTCTTGCTC+AGG + chr2_2:58910796-58910815 Msa0260930:CDS 55.0%
ACCTGAGCAAGAGACGGTCT+AGG - chr2_2:58910800-58910819 None:intergenic 55.0%
GCTCATTCCCTTGATCCAGC+GGG - chr2_2:58911002-58911021 None:intergenic 55.0%
TATGCTTAACCACTGCCCCG+GGG - chr2_2:58912766-58912785 None:intergenic 55.0%
GTATGCTTAACCACTGCCCC+GGG - chr2_2:58912767-58912786 None:intergenic 55.0%
GGTATGCTTAACCACTGCCC+CGG - chr2_2:58912768-58912787 None:intergenic 55.0%
GAAATGCTAACTGGTGCCCC+GGG - chr2_2:58912907-58912926 None:intergenic 55.0%
GGAAATGCTAACTGGTGCCC+CGG - chr2_2:58912908-58912927 None:intergenic 55.0%
TGTGGGTGGGGTGATCCATT+GGG - chr2_2:58912996-58913015 None:intergenic 55.0%
TAGTACTTGGGGGGAGGGTT+TGG + chr2_2:58914228-58914247 Msa0260930:intron 55.0%
GGAGGGTTTGGAGGACTTCA+AGG + chr2_2:58914240-58914259 Msa0260930:CDS 55.0%
! CCGAGGCCCATCTTTTCTGT+TGG - chr2_2:58916466-58916485 None:intergenic 55.0%
CAGCGTGAGTTAACTCCCGC+TGG + chr2_2:58910984-58911003 Msa0260930:intron 60.0%
ATGCTTAACCACTGCCCCGG+GGG - chr2_2:58912765-58912784 None:intergenic 60.0%
GTGTGGGTGGGGTGATCCAT+TGG - chr2_2:58912997-58913016 None:intergenic 60.0%
TACTTGGGGGGAGGGTTTGG+AGG + chr2_2:58914231-58914250 Msa0260930:CDS 60.0%
TGGCACTACCTGGGGCAAAC+AGG + chr2_2:58915579-58915598 Msa0260930:CDS 60.0%
GTTGCTCACCTGTTTGCCCC+AGG - chr2_2:58915590-58915609 None:intergenic 60.0%
GTCCTGCTAACTGGTGCCCC+CGG + chr2_2:58912746-58912765 Msa0260930:intron 65.0%
TCCTGCTAACTGGTGCCCCC+GGG + chr2_2:58912747-58912766 Msa0260930:intron 65.0%
! AGTGGGCTTGGGTATGGGCC+TGG + chr2_2:58917639-58917658 Msa0260930:CDS 65.0%
CCTGCTAACTGGTGCCCCCG+GGG + chr2_2:58912748-58912767 Msa0260930:intron 70.0%
CTAACTGGTGCCCCGGGCAC+CGG - chr2_2:58912901-58912920 None:intergenic 70.0%
!! CCCCGGGGGCACCAGTTAGC+AGG - chr2_2:58912751-58912770 None:intergenic 75.0%
AACTGGTGCCCCCGGGGCAG+TGG + chr2_2:58912754-58912773 Msa0260930:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 58910353 58917994 58910353 ID=Msa0260930;Name=Msa0260930
chr2_2 mRNA 58910353 58917994 58910353 ID=Msa0260930-mRNA-1;Parent=Msa0260930;Name=Msa0260930-mRNA-1;_AED=0.10;_eAED=0.10;_QI=208|1|1|1|1|1|9|173|736
chr2_2 exon 58910353 58910817 58910353 ID=Msa0260930-mRNA-1:exon:18156;Parent=Msa0260930-mRNA-1
chr2_2 exon 58911174 58911501 58911174 ID=Msa0260930-mRNA-1:exon:18157;Parent=Msa0260930-mRNA-1
chr2_2 exon 58911922 58912041 58911922 ID=Msa0260930-mRNA-1:exon:18158;Parent=Msa0260930-mRNA-1
chr2_2 exon 58913225 58913341 58913225 ID=Msa0260930-mRNA-1:exon:18159;Parent=Msa0260930-mRNA-1
chr2_2 exon 58913782 58913994 58913782 ID=Msa0260930-mRNA-1:exon:18160;Parent=Msa0260930-mRNA-1
chr2_2 exon 58914231 58914369 58914231 ID=Msa0260930-mRNA-1:exon:18161;Parent=Msa0260930-mRNA-1
chr2_2 exon 58915437 58915600 58915437 ID=Msa0260930-mRNA-1:exon:18162;Parent=Msa0260930-mRNA-1
chr2_2 exon 58916320 58916670 58916320 ID=Msa0260930-mRNA-1:exon:18163;Parent=Msa0260930-mRNA-1
chr2_2 exon 58917300 58917994 58917300 ID=Msa0260930-mRNA-1:exon:18164;Parent=Msa0260930-mRNA-1
chr2_2 five_prime_UTR 58910353 58910560 58910353 ID=Msa0260930-mRNA-1:five_prime_utr;Parent=Msa0260930-mRNA-1
chr2_2 CDS 58910561 58910817 58910561 ID=Msa0260930-mRNA-1:cds;Parent=Msa0260930-mRNA-1
chr2_2 CDS 58911174 58911501 58911174 ID=Msa0260930-mRNA-1:cds;Parent=Msa0260930-mRNA-1
chr2_2 CDS 58911922 58912041 58911922 ID=Msa0260930-mRNA-1:cds;Parent=Msa0260930-mRNA-1
chr2_2 CDS 58913225 58913341 58913225 ID=Msa0260930-mRNA-1:cds;Parent=Msa0260930-mRNA-1
chr2_2 CDS 58913782 58913994 58913782 ID=Msa0260930-mRNA-1:cds;Parent=Msa0260930-mRNA-1
chr2_2 CDS 58914231 58914369 58914231 ID=Msa0260930-mRNA-1:cds;Parent=Msa0260930-mRNA-1
chr2_2 CDS 58915437 58915600 58915437 ID=Msa0260930-mRNA-1:cds;Parent=Msa0260930-mRNA-1
chr2_2 CDS 58916320 58916670 58916320 ID=Msa0260930-mRNA-1:cds;Parent=Msa0260930-mRNA-1
chr2_2 CDS 58917300 58917821 58917300 ID=Msa0260930-mRNA-1:cds;Parent=Msa0260930-mRNA-1
chr2_2 three_prime_UTR 58917822 58917994 58917822 ID=Msa0260930-mRNA-1:three_prime_utr;Parent=Msa0260930-mRNA-1
Gene Sequence

>Msa0260930

ATGGCCAATCAAAACCCTCTCCCTCTCTATGATAAAATTTTGTTGAAATACACATTTTCAAGAGTGATGGATTCCTTCACTTTGCTCTTCCTTCTCTTGCTTCTTGGTTACCGTATTTTATATATCAACAATTATCCCTTCCCTTGGTTTGTTGCATTTCTTTGTGAGTCATGGTTCACCTTCATTTGGGTTGTCACCATGAGCACCAAATGGAGTCCTGCATATACCATAACCCACCTAGACCGTCTCTTGCTCAGGGAACATGAGCTTCCAGCATTGGACTTGTTTGTGACAACGGCAGATCCAGTGCTAGAACCACCAATCATCACAGTGAATACAGTGTTGTCATTGTTGGCACTTGACTATCCAGCTAACAAGCTAGCATGCTATGTTTCTGATGATGGATGTTCACCTCTTACCTTTTATGCTCTTGTGGAAGCCTCTAAATTTGCTAAGCTTTGGGTACCTTTTTGTAAGAAATACAATGTGCAAGTTAGAGCACCTTTTAGGTACTTTTGTGATGAGAATGCTGTAAGCAACATAGAAGAGTCACCAGAATTTTATCAAGATTGGTTAAGAATGAAGGAGGAATACGGGTACCTCAAGAGTAAAATTGAGAATGCAGCACAAAATCCACTTCCTCTTGTAGGAGAGTTCGCTATTTTCTCAAGCACACATCATAAAAATCATTCAACCATAATCAAGGTGATATGGGAGAACAAGGAAAATCTTCTAGATGGTTTGCCTCACATAATCTACATATCTAGAGAGAAAAAGTCAGATCATCCGCATCAATACAAGGCTGGTGCTATGAATGTGCTAACAAGAGTCTCTGGATTGATGACAAATGCCCATTTCATCTTGAACTTAGATTGTGACATGCATGTGAACAATCCTAAGATTGCTCTACACGCCTTGTGCATTTTGTTAGATTCAAAAGGGGAAAAGGAAGTTGCATTTGTTCAATGTCCCCAACAATTCTATGATGGGCTAAAAGACGATCCTTTTGGAAATCAGCTCGTGGCATTGTTTGTGTACTTGGGGGGAGGGTTTGGAGGACTTCAAGGGATGCTATACGCAGGAACAAATTGCTTCCATAGAAGAAAAGTAATTTATGGCCTTTGTCCTGATCATGACATTCAAAATAGAAAGAAGGGTGATGATGTTGCCAACGAGATGGAAGTGGTATTTGGAACTTCAAAGAGATTTATTGAATCAGCTACTCATGCTTTGGAAGGCAAAACATCTACACCTATTGATAACCTCTGTAACACTCTTGAGGCTGCAAAAAAAGTTGCTAGTTGCACATATGAATATGGCACTACCTGGGGCAAACAGGTGGGTTGGATGTATGGATCAACGTCGGAGGATGTACTTACTGGGTTGGACATTCATACAAGAGGATGGAGATCTGAAATGTGTTCACCAGATCCATTGGCCTTTATGGGTTGCTCACCTCAAGATAACATAGTAAGTATGATCCAACAGAAAAGATGGGCCTCGGGGTTGTTTGATACTCTACTGAGCAAGCACAATCCATTTTTGGGCTTTCTCTATGGTAAGCTTCAATTTAGAGAGGCTCTTGGGTATTTTTGGATCTTAAGTTGGGCCTTAAGATCAATCCCTGAAATTTGTTATGCTGCTCTACCGGCATATTGCATCCTGACTAACTCCAACTTTTTGCCAGAGAAACTTTGGATACATGCTGCTTTGTTTGTGACTTACAATATATCTACTATATCAGAGAGCTTAAAAACAGGGTTGTCAATTAGAACATGGTGGAACAATCAAAAGATGATGAGAATTACAACCATGAGTGCTTGGTTTTTTGGATTTTTAGCCATCTTACTTAAGTTATTACGAATATCTGAACCTGTCTTTGAAATAACACAGAAAATAGACCAATCATCTAATACTGGTAGGTTTAGTTTCAATGAGTCTCCAATATTTTTACCTAGTACAACAATATTGTTTGTTCAACTCACGGCATTGGCTACTAGCTTATTTGGATGGGCCACATGTGTTAGAAGTGGGCTTGGGTATGGGCCTGGAGAAGTGTTTTGTAGTGCTTACTTAGTTGCATGTTATTGGCCATTTTTTAAAGGGTTGTTTGGGACTGGAAAGCATGGGATCCCTTTATCTACAATATTCAAGTCAGTGATGTTGGCTTTTCTTTTTGTGTATTCATGCAAACTTACCATTACATATTGA
Protein sequence

>Msa0260930

MANQNPLPLYDKILLKYTFSRVMDSFTLLFLLLLLGYRILYINNYPFPWFVAFLCESWFTFIWVVTMSTKWSPAYTITHLDRLLLREHELPALDLFVTTADPVLEPPIITVNTVLSLLALDYPANKLACYVSDDGCSPLTFYALVEASKFAKLWVPFCKKYNVQVRAPFRYFCDENAVSNIEESPEFYQDWLRMKEEYGYLKSKIENAAQNPLPLVGEFAIFSSTHHKNHSTIIKVIWENKENLLDGLPHIIYISREKKSDHPHQYKAGAMNVLTRVSGLMTNAHFILNLDCDMHVNNPKIALHALCILLDSKGEKEVAFVQCPQQFYDGLKDDPFGNQLVALFVYLGGGFGGLQGMLYAGTNCFHRRKVIYGLCPDHDIQNRKKGDDVANEMEVVFGTSKRFIESATHALEGKTSTPIDNLCNTLEAAKKVASCTYEYGTTWGKQVGWMYGSTSEDVLTGLDIHTRGWRSEMCSPDPLAFMGCSPQDNIVSMIQQKRWASGLFDTLLSKHNPFLGFLYGKLQFREALGYFWILSWALRSIPEICYAALPAYCILTNSNFLPEKLWIHAALFVTYNISTISESLKTGLSIRTWWNNQKMMRITTMSAWFFGFLAILLKLLRISEPVFEITQKIDQSSNTGRFSFNESPIFLPSTTILFVQLTALATSLFGWATCVRSGLGYGPGEVFCSAYLVACYWPFFKGLFGTGKHGIPLSTIFKSVMLAFLFVYSCKLTITY*