AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0754790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0754790 MtrunA17_Chr5g0399661 92.111 431 12 1 263 671 1 431 0.0 810
Msa0754790 MtrunA17_Chr5g0399661 81.818 264 27 5 1 249 3 260 2.25e-140 417
Msa0754790 MtrunA17_Chr5g0399671 83.051 413 41 5 265 648 1 413 0.0 673
Msa0754790 MtrunA17_Chr5g0399671 88.636 264 15 1 1 249 1 264 4.88e-158 462
Msa0754790 MtrunA17_Chr1g0211181 39.500 400 210 5 300 670 8 404 1.90e-87 279
Msa0754790 MtrunA17_Chr1g0211181 40.426 235 122 4 43 261 9 241 6.73e-48 173
Msa0754790 MtrunA17_Chr1g0211141 38.250 400 214 5 301 670 2 398 3.91e-75 246
Msa0754790 MtrunA17_Chr1g0211141 41.204 216 110 3 43 242 2 216 1.03e-40 153
Msa0754790 MtrunA17_Chr1g0197161 38.177 406 214 6 299 670 4 406 2.03e-73 242
Msa0754790 MtrunA17_Chr1g0197161 33.987 306 174 6 41 319 4 308 1.72e-39 150
Msa0754790 MtrunA17_Chr1g0211171 37.376 404 213 5 304 670 9 409 8.77e-73 241
Msa0754790 MtrunA17_Chr1g0211171 41.204 216 107 4 46 242 9 223 8.40e-38 145
Msa0754790 MtrunA17_Chr1g0211151 35.135 407 227 7 298 670 3 406 1.12e-60 208
Msa0754790 MtrunA17_Chr1g0211151 37.900 219 118 4 41 242 4 221 1.65e-32 130
Msa0754790 MtrunA17_Chr4g0017991 42.424 132 73 2 300 428 5 136 4.57e-24 100
Msa0754790 MtrunA17_Chr4g0017991 34.615 130 50 2 43 157 6 115 9.53e-14 70.5
Msa0754790 MtrunA17_Chr4g0018001 27.143 210 143 3 441 640 2 211 6.97e-22 95.5
Msa0754790 MtrunA17_Chr8g0375081 26.016 369 216 13 296 619 75 431 2.18e-21 99.0
Msa0754790 MtrunA17_Chr4g0010391 29.231 260 169 9 379 633 166 415 2.77e-21 97.4
Msa0754790 MtrunA17_Chr4g0017951 52.632 76 35 1 296 371 2 76 4.15e-19 82.0
Msa0754790 MtrunA17_Chr4g0017951 45.070 71 24 1 43 98 6 76 7.61e-11 58.5
Msa0754790 MtrunA17_Chr5g0402211 25.833 360 212 14 304 619 78 426 4.92e-19 91.7
Msa0754790 MtrunA17_Chr4g0017981 30.328 122 79 1 519 634 4 125 1.86e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0754790 AT2G35660.1 69.643 392 97 1 300 669 43 434 0.0 576
Msa0754790 AT2G35660.1 60.630 254 84 2 11 249 13 265 1.73e-97 307
Msa0754790 AT2G35660.2 72.667 300 82 0 370 669 21 320 3.12e-165 477
Msa0754790 AT2G35660.2 69.536 151 46 0 99 249 1 151 4.07e-70 231
Msa0754790 AT2G35660.3 72.667 300 82 0 370 669 21 320 3.12e-165 477
Msa0754790 AT2G35660.3 69.536 151 46 0 99 249 1 151 4.07e-70 231
Msa0754790 AT2G29720.1 62.745 357 111 1 314 648 55 411 8.96e-164 477
Msa0754790 AT2G29720.1 60.853 258 83 3 8 249 8 263 1.92e-92 293
Msa0754790 AT5G05320.1 34.435 363 201 5 302 630 7 366 5.37e-70 234
Msa0754790 AT5G05320.1 34.498 229 132 4 44 256 7 233 2.99e-38 147
Msa0754790 AT4G38540.1 32.918 401 230 5 304 669 9 405 1.84e-65 221
Msa0754790 AT4G38540.1 34.071 226 131 4 46 255 9 232 8.49e-32 128
Msa0754790 AT4G15760.1 31.476 359 202 9 312 634 39 389 8.18e-46 169
Msa0754790 AT4G15760.1 29.545 220 134 4 54 256 39 254 3.21e-22 100
Msa0754790 AT4G15760.2 30.728 371 201 10 312 634 39 401 3.37e-44 164
Msa0754790 AT4G15760.2 28.947 228 137 4 54 256 39 266 4.07e-22 100
Msa0754790 AT4G15765.1 28.169 284 176 5 299 575 1 263 3.56e-26 108
Msa0754790 AT4G15765.1 28.384 229 138 5 46 272 6 210 3.63e-20 91.7
Msa0754790 AT5G67030.1 26.331 338 195 13 300 596 79 403 1.78e-21 99.8
Msa0754790 AT5G67030.2 26.549 339 193 14 300 596 79 403 2.15e-21 99.4
Msa0754790 AT4G15765.2 29.787 94 66 0 168 261 33 126 4.43e-11 63.2
Msa0754790 AT4G15765.5 29.787 94 66 0 168 261 33 126 4.43e-11 63.2
Msa0754790 AT4G15765.3 29.787 94 66 0 168 261 33 126 4.43e-11 63.2
Msa0754790 AT4G15765.4 29.787 94 66 0 168 261 33 126 4.43e-11 63.2

Find 219 sgRNAs with CRISPR-Local

Find 593 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGCCTTGATTGTTAATT+TGG 0.116957 5_2:+8493554 None:intergenic
ATGTCTCAACAGATTGTAAT+AGG 0.209668 5_2:-8491712 Msa0754790:intron
GGATACCTTATTGGAATTCT+TGG 0.212200 5_2:-8487344 Msa0754790:CDS
GGATACCTTCTTGGAATTCT+TGG 0.225203 5_2:-8492033 Msa0754790:CDS
AGATTGAGCCTTGATTAATT+TGG 0.234422 5_2:+8488394 None:intergenic
ATGTCTAAACAGATTGTAAT+AGG 0.240740 5_2:-8487033 Msa0754790:intron
CGATTACAACATGTTCCTTT+TGG 0.248040 5_2:+8488366 None:intergenic
AGAAATACCATGACCATTAT+AGG 0.249032 5_2:-8486062 Msa0754790:three_prime_UTR
TCCAAATGGGGATACCTTAT+TGG 0.254372 5_2:-8487353 Msa0754790:CDS
TACACTTTGGTTGGAGAAAC+AGG 0.298074 5_2:+8491526 None:intergenic
TGCCCAAGATTTGGAGTCAT+TGG 0.307226 5_2:+8486510 None:intergenic
CATGCTCCTTGCCCAAGATT+TGG 0.307845 5_2:+8486501 None:intergenic
TTCATTATGTTTAGTAGCTC+TGG 0.317013 5_2:+8486648 None:intergenic
TGAATATTGTGTATATATTC+AGG 0.322784 5_2:+8486097 None:intergenic
TAGACTTTGGTTGGAGAAAC+AGG 0.332821 5_2:+8486847 None:intergenic
TTGCCTTGTCGTACCAGAAT+TGG 0.332839 5_2:-8493591 Msa0754790:CDS
TCCAAATGGGGATACCTTCT+TGG 0.343769 5_2:-8492042 Msa0754790:CDS
AGTGGAGAGGAGGGTACTTT+TGG 0.353165 5_2:-8487446 Msa0754790:CDS
AGTGGAGAGGAGGGTACTTT+TGG 0.353165 5_2:-8492135 Msa0754790:CDS
CACCCAATGACTCCAAATCT+TGG 0.354503 5_2:-8486513 Msa0754790:CDS
CCAACTTGTCATACCAGAAT+TGG 0.356587 5_2:-8488431 Msa0754790:CDS
TCCAATAAGGTATCCCCATT+TGG 0.359215 5_2:+8487352 None:intergenic
CCACAGGTGAATTACATCTA+TGG 0.363265 5_2:-8491574 Msa0754790:CDS
ATCGTGGGTGGTGGCATTGC+AGG 0.363319 5_2:-8488347 Msa0754790:CDS
TCTCCACTGCACGCACCTCT+TGG 0.364886 5_2:+8487461 None:intergenic
TCTCCACTGCACGCACCTCT+TGG 0.364886 5_2:+8492150 None:intergenic
ATATCGTAGGGATCCAATTC+TGG 0.369127 5_2:+8493578 None:intergenic
GTGAATTACATCTATGGAAA+AGG 0.372345 5_2:-8491568 Msa0754790:CDS
CTAGCACTTATAAAGTTATA+TGG 0.373084 5_2:-8485990 Msa0754790:three_prime_UTR
GCCCAAGATTTGGAGTCATT+GGG 0.380043 5_2:+8486511 None:intergenic
TTGTTGTGATTTCAAGAGTT+GGG 0.381370 5_2:-8486171 Msa0754790:three_prime_UTR
CCCATCCAAGAATTCCAATA+AGG 0.383303 5_2:+8487339 None:intergenic
CTAAGGATCTAGTGGAAAAC+TGG 0.384760 5_2:-8486674 Msa0754790:CDS
GTGAATTACATCTACGGAAA+AGG 0.386225 5_2:-8486889 Msa0754790:CDS
CGATTACAACATGTTCCTTT+CGG 0.387738 5_2:+8493520 None:intergenic
ACTTCTGAGAGCTCCAATTC+TGG 0.395076 5_2:+8488418 None:intergenic
ATTAAGTTTATATCCTATAA+TGG 0.396976 5_2:+8486049 None:intergenic
TCCAAGAAGGTATCCCCATT+TGG 0.398453 5_2:+8492041 None:intergenic
TCTTTATTTAACCTAATGAT+TGG 0.399120 5_2:-8485958 Msa0754790:three_prime_UTR
AGTAAGGCTTGGTCCATTGC+TGG 0.401844 5_2:-8486262 Msa0754790:CDS
TGGTGTTCGGTCTCTTGTGC+TGG 0.403207 5_2:-8488213 Msa0754790:CDS
TAGCTGTATGTATCCAAATA+TGG 0.404062 5_2:+8486010 None:intergenic
TATAATCAGGACTCCGTTGA+TGG 0.407537 5_2:-8486607 Msa0754790:CDS
GAATTCTCAGGCTTGGTGTT+CGG 0.408757 5_2:-8488226 Msa0754790:intron
GAAGAATATTGAATGCTATC+AGG 0.408814 5_2:+8487400 None:intergenic
ATAGCATTCAATATTCTTCA+CGG 0.412492 5_2:-8487396 Msa0754790:CDS
TGCTTTGAATTTCAAAGAAA+AGG 0.412896 5_2:-8492879 Msa0754790:CDS
TGGAGGGCACTTGATTCAAT+TGG 0.413951 5_2:-8493077 Msa0754790:CDS
CACTCCACCCATTCTTGAAA+AGG 0.414267 5_2:+8488150 None:intergenic
CATAGCACAAGCCAATCATT+AGG 0.414589 5_2:+8485947 None:intergenic
ATGTTTGCCCGTATGGTTAG+TGG 0.417439 5_2:+8486357 None:intergenic
ACCTTCTTGGAATTCTTGGA+TGG 0.417941 5_2:-8492029 Msa0754790:CDS
CGTTGATGGATCGATGGCTT+TGG 0.417946 5_2:-8486593 Msa0754790:CDS
AAAAGGTTGTCCATCTGAAT+AGG 0.421657 5_2:+8486921 None:intergenic
AAAAGGTTGTCCATCTGAAT+AGG 0.421700 5_2:+8491600 None:intergenic
TTTCTCCAACCAAAGTGTAT+TGG 0.421909 5_2:-8491522 Msa0754790:CDS
ACGGGCAAACATTGTGGGTT+CGG 0.430334 5_2:-8486346 Msa0754790:CDS
ACCCACAATGTTTGCCCGTA+TGG 0.441085 5_2:+8486350 None:intergenic
TTGTCATACCTAAGCTAGTA+AGG 0.446445 5_2:-8486278 Msa0754790:CDS
AAGATTGAACCAAGTCCAAA+TGG 0.447760 5_2:-8487367 Msa0754790:CDS
AAGATTGAACCAAGTCCAAA+TGG 0.447760 5_2:-8492056 Msa0754790:CDS
ACTCAATATTTAGAAATTCA+AGG 0.453429 5_2:-8488092 Msa0754790:CDS
ACTCAATATTTAGAAATTCA+AGG 0.453429 5_2:-8493035 Msa0754790:CDS
ATCGTGGGTGGTGGCATAGC+AGG 0.462878 5_2:-8493501 Msa0754790:CDS
AAGGTATCCCCATTTGGACT+TGG 0.464282 5_2:+8487358 None:intergenic
ACAACTCTACCTGCAGAAAC+AGG 0.465698 5_2:+8486555 None:intergenic
TTGTTAATTTGGAATATCGT+AGG 0.467403 5_2:+8493565 None:intergenic
ATCTTCAATAGTTCATCTGC+AGG 0.468683 5_2:-8491493 Msa0754790:intron
TAATTCACCCGTGCTTCAAA+AGG 0.468928 5_2:+8486904 None:intergenic
ACCTTATTGGAATTCTTGGA+TGG 0.470171 5_2:-8487340 Msa0754790:CDS
TTTCTCCAACCAAAGTCTAC+TGG 0.470585 5_2:-8486843 Msa0754790:CDS
CAACTGCTCTATCCCTTCAC+AGG 0.470796 5_2:-8488319 Msa0754790:intron
CAACTGCTCTATCCCTTCAC+AGG 0.470796 5_2:-8493473 Msa0754790:intron
GCACAATAACCAACGTACTT+TGG 0.472989 5_2:+8491640 None:intergenic
TGTCTAAACAGATTGTAATA+GGG 0.475468 5_2:-8487032 Msa0754790:intron
AAGGTATCCCCATTTGGACT+TGG 0.476269 5_2:+8492047 None:intergenic
ATACCATTCAATATTCTTCA+CGG 0.476649 5_2:-8492085 Msa0754790:CDS
TGCTTCAACAGTTCATCTCC+AGG 0.477142 5_2:-8486814 Msa0754790:intron
GGCTCAATCTTCAGTCCAAA+AGG 0.477210 5_2:-8488381 Msa0754790:CDS
GGACCAAGCCTTACTAGCTT+AGG 0.477240 5_2:+8486270 None:intergenic
ACAAACCAATACACTTTGGT+TGG 0.478803 5_2:+8491517 None:intergenic
CACCGGATGACACTATAATC+AGG 0.478910 5_2:-8486620 Msa0754790:CDS
TGAATTACATCTACGGAAAA+GGG 0.482581 5_2:-8486888 Msa0754790:CDS
ACCCAATGACTCCAAATCTT+GGG 0.482693 5_2:-8486512 Msa0754790:CDS
TGGAGTGTACTTGATTCAAT+TGG 0.482722 5_2:-8488134 Msa0754790:CDS
ACCATACGGGCAAACATTGT+GGG 0.483763 5_2:-8486351 Msa0754790:CDS
AGGTGCGTGCAGTGGAGAGG+AGG 0.485424 5_2:-8487456 Msa0754790:CDS
AGGTGCGTGCAGTGGAGAGG+AGG 0.485424 5_2:-8492145 Msa0754790:CDS
GCTTGCTTCTTTAGCACCGA+TGG 0.486635 5_2:+8486696 None:intergenic
CTTCTTTAGCACCGATGGCT+CGG 0.487707 5_2:+8486701 None:intergenic
ACCCGCTGGTGTGTTCTGTT+AGG 0.488168 5_2:-8486308 Msa0754790:CDS
AATCATTAGGTTAAATAAAG+AGG 0.488615 5_2:+8485960 None:intergenic
AGATTGAACCAAGTCCAAAT+GGG 0.490772 5_2:-8487366 Msa0754790:CDS
AGATTGAACCAAGTCCAAAT+GGG 0.490772 5_2:-8492055 Msa0754790:CDS
GCACAATGACCAACAAACTT+TGG 0.492071 5_2:+8486961 None:intergenic
CAGAAGTTCCAAATTAATCA+AGG 0.492791 5_2:-8488402 Msa0754790:CDS
ATTGTTGTGATTTCAAGAGT+TGG 0.493147 5_2:-8486172 Msa0754790:three_prime_UTR
GAAGAATATTGAATGGTATC+CGG 0.493585 5_2:+8492089 None:intergenic
TGTCTCAACAGATTGTAATA+GGG 0.495956 5_2:-8491711 Msa0754790:intron
GAGAATATGGCAATGAAAGA+TGG 0.497368 5_2:-8486392 Msa0754790:CDS
CCTTCTTGGAATTCTTGGAT+GGG 0.498261 5_2:-8492028 Msa0754790:CDS
TGTTAATTTGGAATATCGTA+GGG 0.498991 5_2:+8493566 None:intergenic
CATTCAATATTCTTCACGGT+TGG 0.499725 5_2:-8487392 Msa0754790:CDS
GAAACAGGTGGACTTATTGA+TGG 0.501429 5_2:+8486570 None:intergenic
TGAATTACATCTATGGAAAA+GGG 0.502725 5_2:-8491567 Msa0754790:CDS
GCAGATAAACCAGTAGACTT+TGG 0.503117 5_2:+8486834 None:intergenic
CAGTCAGAGTCACTTCGAAC+AGG 0.503637 5_2:-8488188 Msa0754790:CDS
CTCAATATTTAGAAATTCAA+GGG 0.504248 5_2:-8488091 Msa0754790:intron
CTCAATATTTAGAAATTCAA+GGG 0.504248 5_2:-8493034 Msa0754790:intron
ATAAACCAGTAGACTTTGGT+TGG 0.504282 5_2:+8486838 None:intergenic
CATTCAATATTCTTCACGGT+TGG 0.508130 5_2:-8492081 Msa0754790:CDS
CCAATTCTGGTATGACAAGT+TGG 0.517736 5_2:+8488431 None:intergenic
TTTGCAGTGGGACAACCCGC+TGG 0.518391 5_2:-8486322 Msa0754790:CDS
TAATTCACCTGTGGTTGAAA+AGG 0.521016 5_2:+8491583 None:intergenic
AACCATACGGGCAAACATTG+TGG 0.523320 5_2:-8486352 Msa0754790:CDS
CGGAGGTAGTTGTCCATCCA+AGG 0.524864 5_2:+8492109 None:intergenic
ATAAGTCCACCTGTTTCTGC+AGG 0.528684 5_2:-8486564 Msa0754790:CDS
GCATATTTCCACTAACCATA+CGG 0.529804 5_2:-8486365 Msa0754790:CDS
GATGACAAACCAATACACTT+TGG 0.530182 5_2:+8491513 None:intergenic
TTGTGGGTTCGGCTTTGCAG+TGG 0.533335 5_2:-8486335 Msa0754790:CDS
GTCCTGATTATAGTGTCATC+CGG 0.533366 5_2:+8486618 None:intergenic
ATATTCCAAATTAACAATCA+AGG 0.535648 5_2:-8493559 Msa0754790:CDS
TCCTAACAGAACACACCAGC+GGG 0.539378 5_2:+8486307 None:intergenic
CCTTATTGGAATTCTTGGAT+GGG 0.539919 5_2:-8487339 Msa0754790:CDS
AGGAGCATGTTGTGCTCTTG+AGG 0.544378 5_2:-8486487 Msa0754790:CDS
GTATATATTCAGGTATACAT+AGG 0.544796 5_2:+8486107 None:intergenic
GCAGGTAGAGTTGTACTCGT+TGG 0.545159 5_2:-8486546 Msa0754790:CDS
CAACCGTGAAGAATATTGAA+TGG 0.545947 5_2:+8492082 None:intergenic
GAAGCAAGCTAAGGATCTAG+TGG 0.546205 5_2:-8486682 Msa0754790:CDS
TCCTAAAATAACCGAGCCAT+CGG 0.546688 5_2:-8486712 Msa0754790:CDS
TGTGGGTTCGGCTTTGCAGT+GGG 0.549726 5_2:-8486334 Msa0754790:CDS
AAGAGGTGCGTGCAGTGGAG+AGG 0.550530 5_2:-8487459 Msa0754790:CDS
AAGAGGTGCGTGCAGTGGAG+AGG 0.550530 5_2:-8492148 Msa0754790:CDS
CTTGGATGGACAACTACCTC+CGG 0.550873 5_2:-8492108 Msa0754790:CDS
ACAAACTGAATTGAACATCA+TGG 0.551877 5_2:-8493661 Msa0754790:exon
ACTCCACCCATTCTTGAAAA+GGG 0.552204 5_2:+8488151 None:intergenic
TGTTGTGATTTCAAGAGTTG+GGG 0.553078 5_2:-8486170 Msa0754790:three_prime_UTR
CAGATTGTAATAGGGTGCGA+TGG 0.556706 5_2:-8487024 Msa0754790:CDS
CAGCCAAGAGGTGCGTGCAG+TGG 0.558479 5_2:-8487464 Msa0754790:CDS
CAGCCAAGAGGTGCGTGCAG+TGG 0.558479 5_2:-8492153 Msa0754790:CDS
GTTGGTTATTGTGCTTTCCG+TGG 0.559926 5_2:-8491631 Msa0754790:CDS
TATTCAGGTATACATAGGGT+GGG 0.560382 5_2:+8486112 None:intergenic
TTTATATCCTATAATGGTCA+TGG 0.560462 5_2:+8486055 None:intergenic
GTCTACAAAGATGAAAATCA+AGG 0.561028 5_2:-8486215 Msa0754790:exon
TATGGAAAAGGGTTACGTGC+AGG 0.561657 5_2:-8491556 Msa0754790:CDS
TGGGTCTAAAATACTTGCAA+AGG 0.566510 5_2:-8492009 Msa0754790:intron
TTGTACTCGTTGGAGACGCT+TGG 0.567714 5_2:-8486536 Msa0754790:CDS
AAATTAGTGTGCTCCAGCAA+TGG 0.570234 5_2:+8486249 None:intergenic
TTCGATCGCCGATAGCTAAG+TGG 0.571348 5_2:-8491678 Msa0754790:CDS
AGACGAGGTTGTTGTAGCCA+TGG 0.572720 5_2:+8488472 None:intergenic
AAGGAACATGTTGTAATCGT+GGG 0.573031 5_2:-8488362 Msa0754790:CDS
AAAGGAACATGTTGTAATCG+TGG 0.573135 5_2:-8488363 Msa0754790:CDS
TATATATTCAGGTATACATA+GGG 0.573689 5_2:+8486108 None:intergenic
GTACGACAAGGCAATGATGT+AGG 0.573750 5_2:+8493600 None:intergenic
AATCCCATCCACTTAGCTAT+CGG 0.574558 5_2:+8491670 None:intergenic
GGACTTGCCTCCTATTCAGA+TGG 0.575892 5_2:-8486931 Msa0754790:CDS
GGACTTGCCTCCTATTCAGA+TGG 0.575892 5_2:-8491610 Msa0754790:CDS
GCACGGGTGAATTACATCTA+CGG 0.577218 5_2:-8486895 Msa0754790:CDS
TGGGTCTAAACTAGTTGCAA+AGG 0.577733 5_2:-8487320 Msa0754790:intron
AAGGCTGACAACACAATGAA+AGG 0.579807 5_2:-8486196 Msa0754790:three_prime_UTR
ATTATGTTTAGTAGCTCTGG+AGG 0.585207 5_2:+8486651 None:intergenic
CCATAGATGTAATTCACCTG+TGG 0.586219 5_2:+8491574 None:intergenic
AATCCCATCCACTTAGCTAT+CGG 0.586271 5_2:+8486991 None:intergenic
AAAGGAACATGTTGTAATCG+TGG 0.586526 5_2:-8493517 Msa0754790:CDS
AAGGAACATGTTGTAATCGT+GGG 0.588781 5_2:-8493516 Msa0754790:CDS
ATCGCCGATAGCTAAGTGGA+TGG 0.589305 5_2:-8491674 Msa0754790:CDS
GGTGCGTGCAGTGGAGAGGA+GGG 0.589579 5_2:-8487455 Msa0754790:CDS
GGTGCGTGCAGTGGAGAGGA+GGG 0.589579 5_2:-8492144 Msa0754790:CDS
ATCACCGATAGCTAAGTGGA+TGG 0.589651 5_2:-8486995 Msa0754790:CDS
ATTCAGGTATACATAGGGTG+GGG 0.591010 5_2:+8486113 None:intergenic
CCCATCCAAGAATTCCAAGA+AGG 0.591085 5_2:+8492028 None:intergenic
CATATTTCCACTAACCATAC+GGG 0.594920 5_2:-8486364 Msa0754790:CDS
ATGACTCCAAATCTTGGGCA+AGG 0.595031 5_2:-8486507 Msa0754790:CDS
TCAGAGTCACTTAGAACTGG+TGG 0.596903 5_2:-8493128 Msa0754790:intron
AGGTTGTCCATCTGAATAGG+AGG 0.597237 5_2:+8486924 None:intergenic
AGGTTGTCCATCTGAATAGG+AGG 0.597237 5_2:+8491603 None:intergenic
TACGGAAAAGGGTTACGCGC+AGG 0.600680 5_2:-8486877 Msa0754790:CDS
GTTGGTCATTGTGCTTTCCG+TGG 0.600904 5_2:-8486952 Msa0754790:CDS
CTATCTATAACGTCGAGTGG+TGG 0.604110 5_2:+8493697 None:intergenic
CATGTTGTAATCGTGGGTGG+TGG 0.604156 5_2:-8488356 Msa0754790:CDS
CATGTTGTAATCGTGGGTGG+TGG 0.604156 5_2:-8493510 Msa0754790:CDS
GGACTCCGTTGATGGATCGA+TGG 0.604470 5_2:-8486599 Msa0754790:CDS
AAACATAATGAATTCTACAC+CGG 0.605859 5_2:-8486637 Msa0754790:CDS
TTGTGCTCTTGAGGATGCAG+TGG 0.611787 5_2:-8486478 Msa0754790:CDS
ACTAGAGTTGAAACCTGTGA+AGG 0.613474 5_2:+8493460 None:intergenic
ATATTCAGGTATACATAGGG+TGG 0.615654 5_2:+8486111 None:intergenic
TTCGATCACCGATAGCTAAG+TGG 0.615756 5_2:-8486999 Msa0754790:CDS
TCAATCTTCTGATGTCCGAA+AGG 0.615839 5_2:-8493535 Msa0754790:CDS
CAGATTGTAATAGGGTGCGA+CGG 0.616990 5_2:-8491703 Msa0754790:CDS
CTAGAGTTGAAACCTGTGAA+GGG 0.619680 5_2:+8493461 None:intergenic
TCAGAGTCACTTCGAACAGG+TGG 0.621486 5_2:-8488185 Msa0754790:CDS
CAAAGCCATCGATCCATCAA+CGG 0.623139 5_2:+8486594 None:intergenic
ATCTGAATTGAACATGTCCA+TGG 0.625416 5_2:-8488489 Msa0754790:CDS
CTAGAGTTGAAACCTGTGAA+GGG 0.625644 5_2:+8488307 None:intergenic
TCGCCGATAGCTAAGTGGAT+GGG 0.626839 5_2:-8491673 Msa0754790:CDS
TCACCGATAGCTAAGTGGAT+GGG 0.628133 5_2:-8486994 Msa0754790:CDS
GGTGCTAAAGAAGCAAGCTA+AGG 0.629803 5_2:-8486691 Msa0754790:CDS
GCTAGAGTTGAAACCTGTGA+AGG 0.639052 5_2:+8488306 None:intergenic
GATTGAACCAAGTCCAAATG+GGG 0.644561 5_2:-8487365 Msa0754790:CDS
GATTGAACCAAGTCCAAATG+GGG 0.644561 5_2:-8492054 Msa0754790:CDS
ATTTCAAAGAAAAGGACGAA+AGG 0.644711 5_2:-8492871 Msa0754790:intron
ACGGATATTGTGCAGCCAAG+AGG 0.645003 5_2:-8487476 Msa0754790:intron
CTGAATAGGAGGCAAGTCCA+CGG 0.650582 5_2:+8486935 None:intergenic
CTGAATAGGAGGCAAGTCCA+CGG 0.650582 5_2:+8491614 None:intergenic
GAATATTGAATGCTATCAGG+AGG 0.654073 5_2:+8487403 None:intergenic
TGGGCTATTGTGCAGCCAAG+AGG 0.656706 5_2:-8492165 Msa0754790:intron
ATTGTGTTGAAATCTGAGGA+TGG 0.657886 5_2:-8492914 Msa0754790:CDS
GAAGGGATAGAGCAGTTGCA+AGG 0.666482 5_2:+8488324 None:intergenic
GAAGGGATAGAGCAGTTGCA+AGG 0.666482 5_2:+8493478 None:intergenic
ACTCTACCTGCAGAAACAGG+TGG 0.672264 5_2:+8486558 None:intergenic
CAGGATTGTGTTGAAATCTG+AGG 0.674897 5_2:-8492918 Msa0754790:CDS
GAATATTGAATGGTATCCGG+AGG 0.679865 5_2:+8492092 None:intergenic
AGTCTATCTATAACGTCGAG+TGG 0.682111 5_2:+8493694 None:intergenic
GATCCAATTCTGGTACGACA+AGG 0.683776 5_2:+8493588 None:intergenic
TTTAAGAATCATAAAAGACG+AGG 0.685989 5_2:+8488457 None:intergenic
TTCCTAACAGAACACACCAG+CGG 0.695061 5_2:+8486306 None:intergenic
ATGGTTAGTGGAAATATGCG+CGG 0.713230 5_2:+8486369 None:intergenic
GAACATGTTGTAATCGTGGG+TGG 0.726429 5_2:-8488359 Msa0754790:CDS
GAACATGTTGTAATCGTGGG+TGG 0.726429 5_2:-8493513 Msa0754790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTTATGAAATGTATA+TGG - chr5_2:8487484-8487503 Msa0754790:intron 10.0%
!! ATTATTTATGAAATGTATAT+GGG - chr5_2:8487485-8487504 Msa0754790:intron 10.0%
!! AAGAAGATATTTATCATTAT+TGG - chr5_2:8486894-8486913 Msa0754790:CDS 15.0%
!!! TTTACATTCACTTTTTTATT+AGG + chr5_2:8487059-8487078 None:intergenic 15.0%
!!! ATATATTTGTCTTTTGTAAA+AGG + chr5_2:8487171-8487190 None:intergenic 15.0%
!! AACTTAGTTGAAAAAATATT+TGG - chr5_2:8487760-8487779 Msa0754790:intron 15.0%
!! GTAATTTAACTATATATGTA+TGG + chr5_2:8488217-8488236 None:intergenic 15.0%
!! TAAATGAAAGAAAAGAAAAA+AGG - chr5_2:8489134-8489153 Msa0754790:intron 15.0%
!!! AATTTTAACATAAATTTCAG+GGG + chr5_2:8489291-8489310 None:intergenic 15.0%
!!! CAATTTTAACATAAATTTCA+GGG + chr5_2:8489292-8489311 None:intergenic 15.0%
!!! AAATTTTAACATCGTAAATT+TGG - chr5_2:8489356-8489375 Msa0754790:intron 15.0%
!!! ATCTTTTCTTATGTAAAATA+TGG + chr5_2:8489797-8489816 None:intergenic 15.0%
!! TTACATAAGAAAAGATTATT+TGG - chr5_2:8489801-8489820 Msa0754790:intron 15.0%
!! TTTACAATTTCATTATGAAA+AGG + chr5_2:8490306-8490325 None:intergenic 15.0%
!!! TCTAAAATTCATATAGAATT+AGG + chr5_2:8490409-8490428 None:intergenic 15.0%
!!! TAGCTTTTAAAAATAACAAT+GGG - chr5_2:8490592-8490611 Msa0754790:intron 15.0%
!!! ATTTTCTATTTAAATTTTCC+CGG - chr5_2:8490687-8490706 Msa0754790:intron 15.0%
!! AATATTTATGAAATGCATAA+CGG - chr5_2:8492174-8492193 Msa0754790:intron 15.0%
!! TTGTAAATCTAATAAAATCA+TGG + chr5_2:8492425-8492444 None:intergenic 15.0%
!!! TTTTATTAGATTTACAAAGT+TGG - chr5_2:8492428-8492447 Msa0754790:intron 15.0%
!! ATTAAGTTTATATCCTATAA+TGG + chr5_2:8493623-8493642 None:intergenic 15.0%
!! ATATTCCAAATTAACAATCA+AGG - chr5_2:8486110-8486129 Msa0754790:three_prime_UTR 20.0%
!! ACTCAATATTTAGAAATTCA+AGG - chr5_2:8486634-8486653 Msa0754790:CDS 20.0%
!! CTCAATATTTAGAAATTCAA+GGG - chr5_2:8486635-8486654 Msa0754790:CDS 20.0%
!!! CTAAATAATGTAGAGTTTTA+TGG + chr5_2:8486939-8486958 None:intergenic 20.0%
!! AAATTCATTTCTAAATTGTG+GGG + chr5_2:8486999-8487018 None:intergenic 20.0%
!! GAAATTCATTTCTAAATTGT+GGG + chr5_2:8487000-8487019 None:intergenic 20.0%
!! TGAAATTCATTTCTAAATTG+TGG + chr5_2:8487001-8487020 None:intergenic 20.0%
!! TTACAAAAGACAAATATATG+AGG - chr5_2:8487172-8487191 Msa0754790:intron 20.0%
!! TACAAAAGACAAATATATGA+GGG - chr5_2:8487173-8487192 Msa0754790:intron 20.0%
!! AGTTCGTAAAAAATTAATCA+CGG + chr5_2:8487744-8487763 None:intergenic 20.0%
!! AAAAAGTTTATTAGTGTAGT+TGG - chr5_2:8488976-8488995 Msa0754790:intron 20.0%
!! TCTTTCATTTAGCAAAAATA+AGG + chr5_2:8489125-8489144 None:intergenic 20.0%
!!! AAAAGGTAATCAATTTTCTA+AGG - chr5_2:8489151-8489170 Msa0754790:intron 20.0%
!!! ATTTTCTAAGGTGAATTTTA+TGG - chr5_2:8489163-8489182 Msa0754790:intron 20.0%
!!! GCAATTTTAACATAAATTTC+AGG + chr5_2:8489293-8489312 None:intergenic 20.0%
!! TATATATTCAAGTGTACATA+CGG + chr5_2:8489658-8489677 None:intergenic 20.0%
!! ACAAATCAAAATACATTGTT+TGG - chr5_2:8490160-8490179 Msa0754790:intron 20.0%
!!! GTAGCTTTTAAAAATAACAA+TGG - chr5_2:8490591-8490610 Msa0754790:intron 20.0%
!!! TTCGGATAAACTTTTTAAAT+TGG + chr5_2:8490974-8490993 None:intergenic 20.0%
!! ATTTAAAAAGTTTATCCGAA+CGG - chr5_2:8490974-8490993 Msa0754790:intron 20.0%
!!! TTTGTTTTGGAAAATTACTA+CGG + chr5_2:8491053-8491072 None:intergenic 20.0%
!! ACTCAATATTTAGAAATTCA+AGG - chr5_2:8486634-8486653 Msa0754790:CDS 20.0%
!! CTCAATATTTAGAAATTCAA+GGG - chr5_2:8486635-8486654 Msa0754790:CDS 20.0%
!!! TTTTCACTTCTTAATACAAT+GGG + chr5_2:8492049-8492068 None:intergenic 20.0%
!!! TTTTTCACTTCTTAATACAA+TGG + chr5_2:8492050-8492069 None:intergenic 20.0%
!! TATTAAGAAGTGAAAAATTG+TGG - chr5_2:8492053-8492072 Msa0754790:CDS 20.0%
!! ATTAAGAAGTGAAAAATTGT+GGG - chr5_2:8492054-8492073 Msa0754790:CDS 20.0%
!! TTTCGTTGTTAAATTATTGT+TGG - chr5_2:8492148-8492167 Msa0754790:CDS 20.0%
!!! TCAATTTGTTAACACTTTTT+AGG + chr5_2:8492612-8492631 None:intergenic 20.0%
!! TATATATTCAGGTATACATA+GGG + chr5_2:8493564-8493583 None:intergenic 20.0%
!! TGAATATTGTGTATATATTC+AGG + chr5_2:8493575-8493594 None:intergenic 20.0%
!!! GTATTGAAATTTTCCATATT+TGG - chr5_2:8493646-8493665 Msa0754790:exon 20.0%
!! AATCATTAGGTTAAATAAAG+AGG + chr5_2:8493712-8493731 None:intergenic 20.0%
!!! TCTTTATTTAACCTAATGAT+TGG - chr5_2:8493711-8493730 Msa0754790:five_prime_UTR 20.0%
!! TGTTAATTTGGAATATCGTA+GGG + chr5_2:8486106-8486125 None:intergenic 25.0%
!! TTGTTAATTTGGAATATCGT+AGG + chr5_2:8486107-8486126 None:intergenic 25.0%
!! TGATTTTCTCAAACTATTAG+CGG + chr5_2:8486296-8486315 None:intergenic 25.0%
!! TGCTTTGAATTTCAAAGAAA+AGG - chr5_2:8486790-8486809 Msa0754790:intron 25.0%
!!! TATCATTATTGGTTTTTGTC+CGG - chr5_2:8486905-8486924 Msa0754790:CDS 25.0%
! AAAGAAAGACAAAAATCTGA+AGG - chr5_2:8487090-8487109 Msa0754790:intron 25.0%
! AATCATTTATAAACTATCCC+TGG + chr5_2:8487371-8487390 None:intergenic 25.0%
! TTTAGTCATTGATACATAGT+TGG - chr5_2:8487459-8487478 Msa0754790:CDS 25.0%
! ATACCATTCAATATTCTTCA+CGG - chr5_2:8487584-8487603 Msa0754790:intron 25.0%
!! ATTGACTCATTGTGATTTAT+GGG - chr5_2:8487689-8487708 Msa0754790:intron 25.0%
! AAAGGATCTTACAAACATAA+TGG - chr5_2:8487885-8487904 Msa0754790:intron 25.0%
!!! TCAATTTGTTAGCAGTTTTT+AGG + chr5_2:8487933-8487952 None:intergenic 25.0%
! TGAATTACATCTATGGAAAA+GGG - chr5_2:8488102-8488121 Msa0754790:CDS 25.0%
! TTTCATCTGAACAATAAACT+CGG + chr5_2:8488239-8488258 None:intergenic 25.0%
! TGAAAAATAGTTGAGTTCTA+TGG - chr5_2:8488254-8488273 Msa0754790:intron 25.0%
!!! TATTTCATTTGAGTTGCTTA+CGG - chr5_2:8488867-8488886 Msa0754790:intron 25.0%
!! AAGAGTGAGTAAAAATGTTT+TGG - chr5_2:8489230-8489249 Msa0754790:intron 25.0%
!!! TACTCAGAATTTTTTACCTT+TGG - chr5_2:8489437-8489456 Msa0754790:intron 25.0%
!!! ACTCAGAATTTTTTACCTTT+GGG - chr5_2:8489438-8489457 Msa0754790:intron 25.0%
! TAAGTTAAATTTGTGAGCTA+TGG - chr5_2:8489693-8489712 Msa0754790:intron 25.0%
! CATAAGAAAAGATTATTTGG+CGG - chr5_2:8489804-8489823 Msa0754790:intron 25.0%
!! AAAATACATTGTTTGGTCTT+TGG - chr5_2:8490167-8490186 Msa0754790:intron 25.0%
!!! TGTAAATTGTGTTGTTTGTA+AGG - chr5_2:8490320-8490339 Msa0754790:intron 25.0%
!! GAAATTTATCTTTTCCTTTC+TGG - chr5_2:8490877-8490896 Msa0754790:intron 25.0%
! TTTAAGAATCATAAAAGACG+AGG + chr5_2:8491215-8491234 None:intergenic 25.0%
! AATATATGCATTGTGCAATA+AGG + chr5_2:8491641-8491660 None:intergenic 25.0%
! TTATCCACACATCATATATA+TGG + chr5_2:8491936-8491955 None:intergenic 25.0%
!! ATCTTAGATATTTTCACTAC+TGG - chr5_2:8491967-8491986 Msa0754790:intron 25.0%
! TCAAATGATAAAATGATGCA+TGG + chr5_2:8492101-8492120 None:intergenic 25.0%
!!! TATCATTTGAGTTGTACTAA+TGG - chr5_2:8492111-8492130 Msa0754790:CDS 25.0%
!!! ATCATTTGAGTTGTACTAAT+GGG - chr5_2:8492112-8492131 Msa0754790:CDS 25.0%
! ATAGCATTCAATATTCTTCA+CGG - chr5_2:8492273-8492292 Msa0754790:intron 25.0%
!! AGGTTAGTCATTGTAATTTA+TGG - chr5_2:8492369-8492388 Msa0754790:intron 25.0%
! ATTGTAATTTATGGTGTGTT+TGG - chr5_2:8492378-8492397 Msa0754790:intron 25.0%
! GAATTATGTTTAAACACAGT+CGG + chr5_2:8492478-8492497 None:intergenic 25.0%
! TATTAATCTAACCACATGAT+TGG - chr5_2:8492518-8492537 Msa0754790:intron 25.0%
! TATTACAATCTGTTTAGACA+TGG + chr5_2:8492637-8492656 None:intergenic 25.0%
! ATGTCTAAACAGATTGTAAT+AGG - chr5_2:8492636-8492655 Msa0754790:intron 25.0%
! TGTCTAAACAGATTGTAATA+GGG - chr5_2:8492637-8492656 Msa0754790:intron 25.0%
! GTTACTAATAAGTCCATATA+TGG - chr5_2:8492880-8492899 Msa0754790:CDS 25.0%
! TCAGGTAATTTAACCATATA+TGG + chr5_2:8492896-8492915 None:intergenic 25.0%
! TTCATATGAACAATAAACTC+AGG + chr5_2:8492914-8492933 None:intergenic 25.0%
! TGAAAAATAGTTGAGTTCAA+TGG - chr5_2:8492930-8492949 Msa0754790:intron 25.0%
! AAACATAATGAATTCTACAC+CGG - chr5_2:8493032-8493051 Msa0754790:intron 25.0%
! GTATATATTCAGGTATACAT+AGG + chr5_2:8493565-8493584 None:intergenic 25.0%
! TTTATATCCTATAATGGTCA+TGG + chr5_2:8493617-8493636 None:intergenic 25.0%
! CTAGCACTTATAAAGTTATA+TGG - chr5_2:8493679-8493698 Msa0754790:five_prime_UTR 25.0%
ACAAACTGAATTGAACATCA+TGG - chr5_2:8486008-8486027 Msa0754790:three_prime_UTR 30.0%
TTGAGCCTTGATTGTTAATT+TGG + chr5_2:8486118-8486137 None:intergenic 30.0%
TGGTGATAAAGAATAGATTG+AGG + chr5_2:8486236-8486255 None:intergenic 30.0%
! CCATCATTACTTTGATAACA+CGG - chr5_2:8486253-8486272 Msa0754790:CDS 30.0%
GATATAAGAATTGTGCAACA+AGG + chr5_2:8486696-8486715 None:intergenic 30.0%
GTTCATAAATTTGGCTATAC+AGG - chr5_2:8486732-8486751 Msa0754790:intron 30.0%
ATTTCAAAGAAAAGGACGAA+AGG - chr5_2:8486798-8486817 Msa0754790:intron 30.0%
GAAATGAATTTCACATGAAG+TGG - chr5_2:8487008-8487027 Msa0754790:CDS 30.0%
!! GAAGTATTGTGCTTTGTAAA+AGG + chr5_2:8487413-8487432 None:intergenic 30.0%
AGCACAATACTTCGAAAATT+TGG - chr5_2:8487420-8487439 Msa0754790:CDS 30.0%
AATACTTCGAAAATTTGGCT+TGG - chr5_2:8487425-8487444 Msa0754790:CDS 30.0%
! ATACTTCGAAAATTTGGCTT+GGG - chr5_2:8487426-8487445 Msa0754790:CDS 30.0%
GAAGAATATTGAATGGTATC+CGG + chr5_2:8487583-8487602 None:intergenic 30.0%
!! CATTGACTCATTGTGATTTA+TGG - chr5_2:8487688-8487707 Msa0754790:intron 30.0%
TTGACTCATTGTGATTTATG+GGG - chr5_2:8487690-8487709 Msa0754790:intron 30.0%
CTAAAAACATAGTGCACAAA+AGG - chr5_2:8487867-8487886 Msa0754790:intron 30.0%
ATGTCTCAACAGATTGTAAT+AGG - chr5_2:8487957-8487976 Msa0754790:intron 30.0%
TGTCTCAACAGATTGTAATA+GGG - chr5_2:8487958-8487977 Msa0754790:intron 30.0%
GTGAATTACATCTATGGAAA+AGG - chr5_2:8488101-8488120 Msa0754790:CDS 30.0%
CATATTTCCAATAACCATAC+TGG - chr5_2:8488629-8488648 Msa0754790:intron 30.0%
ATGTTAGGAACAATATTGTC+AGG - chr5_2:8488700-8488719 Msa0754790:intron 30.0%
TGTTAGGAACAATATTGTCA+GGG - chr5_2:8488701-8488720 Msa0754790:intron 30.0%
ATCATTGAAATCAACATGAG+TGG + chr5_2:8488908-8488927 None:intergenic 30.0%
! ATACTATGATGATGCCTTAT+CGG - chr5_2:8489206-8489225 Msa0754790:intron 30.0%
! TTTTGGATAGATCACATAGA+AGG - chr5_2:8489247-8489266 Msa0754790:intron 30.0%
!!! AGAATTTTTTACCTTTGGGA+TGG - chr5_2:8489442-8489461 Msa0754790:intron 30.0%
! TTTTCATCTTTGTAGACTCT+CGG + chr5_2:8489568-8489587 None:intergenic 30.0%
GTCTACAAAGATGAAAATCA+AGG - chr5_2:8489571-8489590 Msa0754790:intron 30.0%
TCATTTGAACTTGGAAAGTT+GGG + chr5_2:8489875-8489894 None:intergenic 30.0%
TCATCATTCTCATTTGAACT+TGG + chr5_2:8489884-8489903 None:intergenic 30.0%
! TAGTTAGAGAGCATGAATAA+GGG - chr5_2:8489905-8489924 Msa0754790:intron 30.0%
TACGGAACATAATCATCTTT+AGG - chr5_2:8489969-8489988 Msa0754790:intron 30.0%
!! CCAAATTAAATGCTTTTTGG+TGG + chr5_2:8490018-8490037 None:intergenic 30.0%
!! CCACCAAAAAGCATTTAATT+TGG - chr5_2:8490015-8490034 Msa0754790:intron 30.0%
! CCACCAAATTAAATGCTTTT+TGG + chr5_2:8490021-8490040 None:intergenic 30.0%
!! CCAAAAAGCATTTAATTTGG+TGG - chr5_2:8490018-8490037 Msa0754790:intron 30.0%
CTTTGACTATTGACAATGAT+GGG + chr5_2:8490085-8490104 None:intergenic 30.0%
TCTTTGACTATTGACAATGA+TGG + chr5_2:8490086-8490105 None:intergenic 30.0%
AGCATGATATATAGCTCAAA+AGG - chr5_2:8490105-8490124 Msa0754790:intron 30.0%
GCATGATATATAGCTCAAAA+GGG - chr5_2:8490106-8490125 Msa0754790:intron 30.0%
CAGTGAATATGTAAGAATCA+CGG - chr5_2:8490541-8490560 Msa0754790:intron 30.0%
TTGTCAATGTAACCTATGTT+TGG + chr5_2:8490641-8490660 None:intergenic 30.0%
AAGAAGAAAAAAAGTCAAGC+AGG + chr5_2:8490731-8490750 None:intergenic 30.0%
CAGAAGTTCCAAATTAATCA+AGG - chr5_2:8491267-8491286 Msa0754790:intron 30.0%
AGATTGAGCCTTGATTAATT+TGG + chr5_2:8491278-8491297 None:intergenic 30.0%
!! ATCCTCTTCTTTGAAATTGA+AGG + chr5_2:8491740-8491759 None:intergenic 30.0%
ATTTCAAAGAAGAGGATGAA+AGG - chr5_2:8491743-8491762 Msa0754790:intron 30.0%
GTTAGTGCAGTATTTGATAT+TGG - chr5_2:8491874-8491893 Msa0754790:intron 30.0%
! ATTTGATATTGGTGCTTGAT+AGG - chr5_2:8491885-8491904 Msa0754790:intron 30.0%
!!! TATATGGATGGACCTTTTTT+TGG + chr5_2:8491920-8491939 None:intergenic 30.0%
ATAAAATGATGCATGGACAT+CGG + chr5_2:8492094-8492113 None:intergenic 30.0%
GAAGAATATTGAATGCTATC+AGG + chr5_2:8492272-8492291 None:intergenic 30.0%
! AAGTTGGTTGACAAAACATT+TGG - chr5_2:8492444-8492463 Msa0754790:intron 30.0%
! TTTTGTGCAGTATGTTTTCA+GGG + chr5_2:8492550-8492569 None:intergenic 30.0%
TGAATTACATCTACGGAAAA+GGG - chr5_2:8492781-8492800 Msa0754790:intron 30.0%
TTCATTATGTTTAGTAGCTC+TGG + chr5_2:8493024-8493043 None:intergenic 30.0%
GTCTACAAAGATGAAAATCA+AGG - chr5_2:8489571-8489590 Msa0754790:intron 30.0%
ATTGTTGTGATTTCAAGAGT+TGG - chr5_2:8493497-8493516 Msa0754790:CDS 30.0%
TTGTTGTGATTTCAAGAGTT+GGG - chr5_2:8493498-8493517 Msa0754790:CDS 30.0%
AGAAATACCATGACCATTAT+AGG - chr5_2:8493607-8493626 Msa0754790:CDS 30.0%
TAGCTGTATGTATCCAAATA+TGG + chr5_2:8493662-8493681 None:intergenic 30.0%
CGATTACAACATGTTCCTTT+CGG + chr5_2:8486152-8486171 None:intergenic 35.0%
AAAGGAACATGTTGTAATCG+TGG - chr5_2:8486152-8486171 Msa0754790:three_prime_UTR 35.0%
AAGGAACATGTTGTAATCGT+GGG - chr5_2:8486153-8486172 Msa0754790:three_prime_UTR 35.0%
CCGTGTTATCAAAGTAATGA+TGG + chr5_2:8486256-8486275 None:intergenic 35.0%
!! GTTGAACTTGTTGAATTTCC+AGG - chr5_2:8486488-8486507 Msa0754790:CDS 35.0%
! CTTGAGCTGGTTCATAAATT+TGG - chr5_2:8486723-8486742 Msa0754790:intron 35.0%
ATTGTGTTGAAATCTGAGGA+TGG - chr5_2:8486755-8486774 Msa0754790:intron 35.0%
AGGTATATAATTCTGCTGTG+TGG - chr5_2:8486818-8486837 Msa0754790:CDS 35.0%
TGGTTAGATCCATATGACAT+TGG - chr5_2:8487028-8487047 Msa0754790:intron 35.0%
TAGGTGAAACCAATGTCATA+TGG + chr5_2:8487040-8487059 None:intergenic 35.0%
!! ATACCCTTTAGCCTTAACTA+GGG - chr5_2:8487296-8487315 Msa0754790:intron 35.0%
!!! TGAGAGGTTTTTTAGTCTAC+TGG + chr5_2:8487331-8487350 None:intergenic 35.0%
!! TTTGTAAAAGGCGTCTTCAT+AGG + chr5_2:8487401-8487420 None:intergenic 35.0%
CAACCGTGAAGAATATTGAA+TGG + chr5_2:8487590-8487609 None:intergenic 35.0%
CATTCAATATTCTTCACGGT+TGG - chr5_2:8487588-8487607 Msa0754790:intron 35.0%
AAGATTGAACCAAGTCCAAA+TGG - chr5_2:8487613-8487632 Msa0754790:intron 35.0%
AGATTGAACCAAGTCCAAAT+GGG - chr5_2:8487614-8487633 Msa0754790:intron 35.0%
! TGGGTCTAAAATACTTGCAA+AGG - chr5_2:8487660-8487679 Msa0754790:intron 35.0%
AAAAGGTTGTCCATCTGAAT+AGG + chr5_2:8488072-8488091 None:intergenic 35.0%
TAATTCACCTGTGGTTGAAA+AGG + chr5_2:8488089-8488108 None:intergenic 35.0%
TTTCTCCAACCAAAGTGTAT+TGG - chr5_2:8488147-8488166 Msa0754790:CDS 35.0%
ACAAACCAATACACTTTGGT+TGG + chr5_2:8488155-8488174 None:intergenic 35.0%
GATGACAAACCAATACACTT+TGG + chr5_2:8488159-8488178 None:intergenic 35.0%
ATCTTCAATAGTTCATCTGC+AGG - chr5_2:8488176-8488195 Msa0754790:CDS 35.0%
AAATAGTTGAGTTCTATGGC+AGG - chr5_2:8488258-8488277 Msa0754790:intron 35.0%
CTAAGGATCTAGTAGAAAAC+TGG - chr5_2:8488319-8488338 Msa0754790:intron 35.0%
TCCATTATGTTTAGTAGCTC+CGG + chr5_2:8488348-8488367 None:intergenic 35.0%
!! AAACATAATGGATTCTACGC+CGG - chr5_2:8488356-8488375 Msa0754790:CDS 35.0%
! TATAGTCTTGACTCCATTGA+TGG - chr5_2:8488386-8488405 Msa0754790:CDS 35.0%
! GAAACAGGTGGATTTATCAA+TGG + chr5_2:8488426-8488445 None:intergenic 35.0%
!! ATAAATCCACCTGTTTCTAG+AGG - chr5_2:8488429-8488448 Msa0754790:CDS 35.0%
ATCCAATGACTCCAAATCTT+GGG - chr5_2:8488481-8488500 Msa0754790:CDS 35.0%
! GAAGACGCTTTTAGATCATA+TGG - chr5_2:8488588-8488607 Msa0754790:intron 35.0%
GATCATATGGCAATGAAAGA+TGG - chr5_2:8488601-8488620 Msa0754790:intron 35.0%
AGAGCGAGGAAAAATAGTTA+AGG - chr5_2:8488726-8488745 Msa0754790:intron 35.0%
GAGCGAGGAAAAATAGTTAA+GGG - chr5_2:8488727-8488746 Msa0754790:intron 35.0%
TTTACTCACTCTTTCCGATA+AGG + chr5_2:8489223-8489242 None:intergenic 35.0%
TCCCCTAATTCTATGTACTT+TGG - chr5_2:8489470-8489489 Msa0754790:intron 35.0%
CCCAAAGTACATAGAATTAG+GGG + chr5_2:8489474-8489493 None:intergenic 35.0%
CCCCTAATTCTATGTACTTT+GGG - chr5_2:8489471-8489490 Msa0754790:intron 35.0%
CCCCAAAGTACATAGAATTA+GGG + chr5_2:8489475-8489494 None:intergenic 35.0%
CCCTAATTCTATGTACTTTG+GGG - chr5_2:8489472-8489491 Msa0754790:intron 35.0%
ACCCCAAAGTACATAGAATT+AGG + chr5_2:8489476-8489495 None:intergenic 35.0%
TGTTGTGATGTCAAGAGTTA+AGG - chr5_2:8489613-8489632 Msa0754790:intron 35.0%
ATTCAAGTGTACATACGGTA+GGG + chr5_2:8489653-8489672 None:intergenic 35.0%
TATTCAAGTGTACATACGGT+AGG + chr5_2:8489654-8489673 None:intergenic 35.0%
AAATTTGTGAGCTATGGCTT+TGG - chr5_2:8489699-8489718 Msa0754790:intron 35.0%
AATTTGTGAGCTATGGCTTT+GGG - chr5_2:8489700-8489719 Msa0754790:intron 35.0%
CTCATTTGAACTTGGAAAGT+TGG + chr5_2:8489876-8489895 None:intergenic 35.0%
! CTAGTTAGAGAGCATGAATA+AGG - chr5_2:8489904-8489923 Msa0754790:intron 35.0%
TCAAGTTAGCAAGTTTCATG+GGG + chr5_2:8489934-8489953 None:intergenic 35.0%
CTCAAGTTAGCAAGTTTCAT+GGG + chr5_2:8489935-8489954 None:intergenic 35.0%
!! AAACTTGCTAACTTGAGGAA+AGG - chr5_2:8489938-8489957 Msa0754790:intron 35.0%
GATGATTATGTTCCGTAAGA+GGG + chr5_2:8489966-8489985 None:intergenic 35.0%
AGATGATTATGTTCCGTAAG+AGG + chr5_2:8489967-8489986 None:intergenic 35.0%
AAGAAATTAAGGTGCGATAG+TGG + chr5_2:8490054-8490073 None:intergenic 35.0%
GAAAAGGTTATTTGTCGTGA+AGG + chr5_2:8490290-8490309 None:intergenic 35.0%
AATCGGCAATACGATATTGT+AGG - chr5_2:8490351-8490370 Msa0754790:intron 35.0%
ACATTTAGTCTGTGTGTGTT+TGG - chr5_2:8490513-8490532 Msa0754790:intron 35.0%
TAGCATGTGATACCAAACAT+AGG - chr5_2:8490626-8490645 Msa0754790:intron 35.0%
ATTGGGCATGTTTGTGAAAT+GGG + chr5_2:8490818-8490837 None:intergenic 35.0%
!!! TTTTGAGGTGGTTGAACATT+GGG + chr5_2:8490835-8490854 None:intergenic 35.0%
!!! AGAGTAACTTTGTTTTGAGG+TGG + chr5_2:8490847-8490866 None:intergenic 35.0%
!!! CCAAGAGTAACTTTGTTTTG+AGG + chr5_2:8490850-8490869 None:intergenic 35.0%
CCTCAAAACAAAGTTACTCT+TGG - chr5_2:8490847-8490866 Msa0754790:intron 35.0%
ACTATCATCGAAGAGTTGAA+TGG + chr5_2:8490918-8490937 None:intergenic 35.0%
AAAATATATCCGGTACCGTT+CGG + chr5_2:8490992-8491011 None:intergenic 35.0%
CGCAAAGACCAAAATATATC+CGG + chr5_2:8491002-8491021 None:intergenic 35.0%
!!! CGGATATATTTTGGTCTTTG+CGG - chr5_2:8491000-8491019 Msa0754790:intron 35.0%
!!! GGATATATTTTGGTCTTTGC+GGG - chr5_2:8491001-8491020 Msa0754790:intron 35.0%
!!! GTAGTGGATACGTTTTGTTT+TGG + chr5_2:8491066-8491085 None:intergenic 35.0%
ATCTGAATTGAACATGTCCA+TGG - chr5_2:8491180-8491199 Msa0754790:intron 35.0%
! CGATTACAACATGTTCCTTT+TGG + chr5_2:8486152-8486171 None:intergenic 35.0%
AAAGGAACATGTTGTAATCG+TGG - chr5_2:8486152-8486171 Msa0754790:three_prime_UTR 35.0%
AAGGAACATGTTGTAATCGT+GGG - chr5_2:8486153-8486172 Msa0754790:three_prime_UTR 35.0%
TGGAGTGTACTTGATTCAAT+TGG - chr5_2:8491535-8491554 Msa0754790:CDS 35.0%
GTTCATAATATCAGCTGTAC+AGG - chr5_2:8491677-8491696 Msa0754790:CDS 35.0%
ATAATATCAGCTGTACAGGA+TGG - chr5_2:8491681-8491700 Msa0754790:CDS 35.0%
TGCCTTCAATTTCAAAGAAG+AGG - chr5_2:8491735-8491754 Msa0754790:intron 35.0%
!! ACATTTTCAGTCAGAAGTGT+TGG + chr5_2:8491789-8491808 None:intergenic 35.0%
ACTTCTGACTGAAAATGTGT+TGG - chr5_2:8491791-8491810 Msa0754790:intron 35.0%
CCACACATCATATATATGGA+TGG + chr5_2:8491932-8491951 None:intergenic 35.0%
CCATCCATATATATGATGTG+TGG - chr5_2:8491929-8491948 Msa0754790:intron 35.0%
! TTTTCTTCCTCCTACCAAAT+AGG - chr5_2:8492005-8492024 Msa0754790:intron 35.0%
TAAAATGATGCATGGACATC+GGG + chr5_2:8492093-8492112 None:intergenic 35.0%
TTGTACTAATGGGACGTTAT+TGG - chr5_2:8492122-8492141 Msa0754790:CDS 35.0%
GAATATTGAATGCTATCAGG+AGG + chr5_2:8492269-8492288 None:intergenic 35.0%
CATTCAATATTCTTCACGGT+TGG - chr5_2:8487588-8487607 Msa0754790:intron 35.0%
AAGATTGAACCAAGTCCAAA+TGG - chr5_2:8487613-8487632 Msa0754790:intron 35.0%
AGATTGAACCAAGTCCAAAT+GGG - chr5_2:8487614-8487633 Msa0754790:intron 35.0%
GGATACCTTATTGGAATTCT+TGG - chr5_2:8492325-8492344 Msa0754790:intron 35.0%
ACCTTATTGGAATTCTTGGA+TGG - chr5_2:8492329-8492348 Msa0754790:intron 35.0%
CCTTATTGGAATTCTTGGAT+GGG - chr5_2:8492330-8492349 Msa0754790:intron 35.0%
! CTTTTGTGCAGTATGTTTTC+AGG + chr5_2:8492551-8492570 None:intergenic 35.0%
CTGAAAACATACTGCACAAA+AGG - chr5_2:8492549-8492568 Msa0754790:intron 35.0%
TAGGACTAAAGCTTCAGAAT+TGG + chr5_2:8492593-8492612 None:intergenic 35.0%
! TTTTCTGAGCCAAAGTTTGT+TGG - chr5_2:8492699-8492718 Msa0754790:intron 35.0%
AAAAGGTTGTCCATCTGAAT+AGG + chr5_2:8488072-8488091 None:intergenic 35.0%
GTGAATTACATCTACGGAAA+AGG - chr5_2:8492780-8492799 Msa0754790:intron 35.0%
ATAAACCAGTAGACTTTGGT+TGG + chr5_2:8492834-8492853 None:intergenic 35.0%
TGGACTTATTAGTAACAACC+TGG + chr5_2:8492876-8492895 None:intergenic 35.0%
AAATAGTTGAGTTCAATGGC+AGG - chr5_2:8492934-8492953 Msa0754790:intron 35.0%
!! ATTATGTTTAGTAGCTCTGG+AGG + chr5_2:8493021-8493040 None:intergenic 35.0%
!! GAAGACGCTTTTAGAGAATA+TGG - chr5_2:8493264-8493283 Msa0754790:intron 35.0%
GAGAATATGGCAATGAAAGA+TGG - chr5_2:8493277-8493296 Msa0754790:intron 35.0%
GCATATTTCCACTAACCATA+CGG - chr5_2:8493304-8493323 Msa0754790:intron 35.0%
CATATTTCCACTAACCATAC+GGG - chr5_2:8493305-8493324 Msa0754790:intron 35.0%
TTGTCATACCTAAGCTAGTA+AGG - chr5_2:8493391-8493410 Msa0754790:intron 35.0%
TGTTGTGATTTCAAGAGTTG+GGG - chr5_2:8493499-8493518 Msa0754790:CDS 35.0%
TATTCAGGTATACATAGGGT+GGG + chr5_2:8493560-8493579 None:intergenic 35.0%
ATATTCAGGTATACATAGGG+TGG + chr5_2:8493561-8493580 None:intergenic 35.0%
AGTCTATCTATAACGTCGAG+TGG + chr5_2:8485978-8485997 None:intergenic 40.0%
ATATCGTAGGGATCCAATTC+TGG + chr5_2:8486094-8486113 None:intergenic 40.0%
TCAATCTTCTGATGTCCGAA+AGG - chr5_2:8486134-8486153 Msa0754790:three_prime_UTR 40.0%
CTAGAGTTGAAACCTGTGAA+GGG + chr5_2:8486211-8486230 None:intergenic 40.0%
ACTAGAGTTGAAACCTGTGA+AGG + chr5_2:8486212-8486231 None:intergenic 40.0%
TCTCAAACTATTAGCGGTGT+CGG + chr5_2:8486290-8486309 None:intergenic 40.0%
GTGTTATCAGCTATGAAGCA+CGG + chr5_2:8486458-8486477 None:intergenic 40.0%
! ACTTGTTGAATTTCCAGGCT+TGG - chr5_2:8486493-8486512 Msa0754790:CDS 40.0%
TCACTCACCCTTTCCAAAAA+TGG - chr5_2:8486568-8486587 Msa0754790:CDS 40.0%
CACTCACCCTTTCCAAAAAT+GGG - chr5_2:8486569-8486588 Msa0754790:CDS 40.0%
CAGGATTGTGTTGAAATCTG+AGG - chr5_2:8486751-8486770 Msa0754790:intron 40.0%
AGAAACTGAGACTAAGTCGT+CGG - chr5_2:8486957-8486976 Msa0754790:CDS 40.0%
!!! TGTCTTTTGTAAAAGGTGCC+CGG + chr5_2:8487164-8487183 None:intergenic 40.0%
! TGAGGGTTTTTACAACTCTG+TGG - chr5_2:8487190-8487209 Msa0754790:intron 40.0%
!! CATACCCTTTAGCCTTAACT+AGG - chr5_2:8487295-8487314 Msa0754790:intron 40.0%
!! TACCCTTTAGCCTTAACTAG+GGG - chr5_2:8487297-8487316 Msa0754790:intron 40.0%
CTTGATTCTCAAGCAATGAG+AGG + chr5_2:8487347-8487366 None:intergenic 40.0%
CTCTCATTGCTTGAGAATCA+AGG - chr5_2:8487345-8487364 Msa0754790:CDS 40.0%
!! TCGAAAATTTGGCTTGGGTT+CGG - chr5_2:8487431-8487450 Msa0754790:CDS 40.0%
!! GTACTTTTGGAAACCTTGGA+TGG - chr5_2:8487547-8487566 Msa0754790:intron 40.0%
GAATATTGAATGGTATCCGG+AGG + chr5_2:8487580-8487599 None:intergenic 40.0%
GATTGAACCAAGTCCAAATG+GGG - chr5_2:8487615-8487634 Msa0754790:intron 40.0%
GGATACCTTCTTGGAATTCT+TGG - chr5_2:8487636-8487655 Msa0754790:intron 40.0%
ACCTTCTTGGAATTCTTGGA+TGG - chr5_2:8487640-8487659 Msa0754790:intron 40.0%
CCTTCTTGGAATTCTTGGAT+GGG - chr5_2:8487641-8487660 Msa0754790:intron 40.0%
AAGCTAACCACATGCATGAT+TGG - chr5_2:8487836-8487855 Msa0754790:intron 40.0%
GTCATAACCAATCATGCATG+TGG + chr5_2:8487846-8487865 None:intergenic 40.0%
GACCAGAGCTTCATGATTAT+TGG + chr5_2:8487911-8487930 None:intergenic 40.0%
AATCCCATCCACTTAGCTAT+CGG + chr5_2:8488002-8488021 None:intergenic 40.0%
! TTTTCTGAGCCAAAGTACGT+TGG - chr5_2:8488020-8488039 Msa0754790:intron 40.0%
GCACAATAACCAACGTACTT+TGG + chr5_2:8488032-8488051 None:intergenic 40.0%
CCATAGATGTAATTCACCTG+TGG + chr5_2:8488098-8488117 None:intergenic 40.0%
CCACAGGTGAATTACATCTA+TGG - chr5_2:8488095-8488114 Msa0754790:CDS 40.0%
TACACTTTGGTTGGAGAAAC+AGG + chr5_2:8488146-8488165 None:intergenic 40.0%
ATTATGTTTAGTAGCTCCGG+AGG + chr5_2:8488345-8488364 None:intergenic 40.0%
TCCGGAGCTACTAAACATAA+TGG - chr5_2:8488344-8488363 Msa0754790:CDS 40.0%
GTCAAGACTATAGTGTCATC+CGG + chr5_2:8488378-8488397 None:intergenic 40.0%
! ACAACTCTACCTCTAGAAAC+AGG + chr5_2:8488441-8488460 None:intergenic 40.0%
CATCCAATGACTCCAAATCT+TGG - chr5_2:8488480-8488499 Msa0754790:CDS 40.0%
AGGTTTGCCAGTATGGTTAT+TGG + chr5_2:8488639-8488658 None:intergenic 40.0%
TTCCTAACATAACACACCAG+CGG + chr5_2:8488690-8488709 None:intergenic 40.0%
CGAGGAAAAATAGTTAAGGG+TGG - chr5_2:8488730-8488749 Msa0754790:intron 40.0%
TTGTCATACCTAAGCTAGCA+AGG - chr5_2:8489508-8489527 Msa0754790:intron 40.0%
AAATTAGTGTGCTCCAGCAA+TGG + chr5_2:8489540-8489559 None:intergenic 40.0%
TCATGTGCATTGCACAATGT+TGG + chr5_2:8489728-8489747 None:intergenic 40.0%
CCTCAAGTTAGCAAGTTTCA+TGG + chr5_2:8489936-8489955 None:intergenic 40.0%
!! CCATGAAACTTGCTAACTTG+AGG - chr5_2:8489933-8489952 Msa0754790:intron 40.0%
! GGGTGTAGTGGAAGAAATTA+AGG + chr5_2:8490065-8490084 None:intergenic 40.0%
!! ATTGACAATGATGGGTGTAG+TGG + chr5_2:8490077-8490096 None:intergenic 40.0%
GTCTTTGGTATGATGCATGA+AGG - chr5_2:8490182-8490201 Msa0754790:intron 40.0%
TGGTATGATGCATGAAGGTT+TGG - chr5_2:8490187-8490206 Msa0754790:intron 40.0%
TATGATGCATGAAGGTTTGG+CGG - chr5_2:8490190-8490209 Msa0754790:intron 40.0%
TTTGTAAGGCCAAGCTCAAT+CGG - chr5_2:8490334-8490353 Msa0754790:intron 40.0%
TTGATGTGTGTGATGTGTGT+TGG + chr5_2:8490489-8490508 None:intergenic 40.0%
GAAAAAAAGTCAAGCAGGAG+TGG + chr5_2:8490726-8490745 None:intergenic 40.0%
ATCAATAAGGCCTTAGTGGT+TGG + chr5_2:8490788-8490807 None:intergenic 40.0%
GGATATCAATAAGGCCTTAG+TGG + chr5_2:8490792-8490811 None:intergenic 40.0%
! AATGGGCTCGGATATCAATA+AGG + chr5_2:8490801-8490820 None:intergenic 40.0%
CATTGGGCATGTTTGTGAAA+TGG + chr5_2:8490819-8490838 None:intergenic 40.0%
!!! GTTTTGAGGTGGTTGAACAT+TGG + chr5_2:8490836-8490855 None:intergenic 40.0%
AAAGTTTATCCGAACGGTAC+CGG - chr5_2:8490980-8490999 Msa0754790:intron 40.0%
!! GAACGGTACCGGATATATTT+TGG - chr5_2:8490991-8491010 Msa0754790:intron 40.0%
! TCCACTACCACTAGTTTATG+TGG - chr5_2:8491078-8491097 Msa0754790:intron 40.0%
TGTGTTGTGTGTTCAGCTTT+GGG + chr5_2:8491104-8491123 None:intergenic 40.0%
TGATTGTAGCTACTAGCTAC+AGG + chr5_2:8491154-8491173 None:intergenic 40.0%
CCAATTCTGGTATGACAAGT+TGG + chr5_2:8491241-8491260 None:intergenic 40.0%
CCAACTTGTCATACCAGAAT+TGG - chr5_2:8491238-8491257 Msa0754790:intron 40.0%
CTAGAGTTGAAACCTGTGAA+GGG + chr5_2:8486211-8486230 None:intergenic 40.0%
TTGTGTTGAATTCTCAGGCT+TGG - chr5_2:8491436-8491455 Msa0754790:intron 40.0%
!! TCACTCACCCTTTTCAAGAA+TGG - chr5_2:8491511-8491530 Msa0754790:CDS 40.0%
!! CACTCACCCTTTTCAAGAAT+GGG - chr5_2:8491512-8491531 Msa0754790:CDS 40.0%
ACTCCACCCATTCTTGAAAA+GGG + chr5_2:8491521-8491540 None:intergenic 40.0%
TATATTAGCTGAGCTTGAGC+TGG - chr5_2:8491655-8491674 Msa0754790:CDS 40.0%
! CTCGTGTTGGTATCAAACAT+TGG + chr5_2:8491830-8491849 None:intergenic 40.0%
AGGTCCATCCTACCAAAAAA+AGG - chr5_2:8491905-8491924 Msa0754790:intron 40.0%
!!! TGGACCTTTTTTTGGTAGGA+TGG + chr5_2:8491912-8491931 None:intergenic 40.0%
!!! TGGATGGACCTTTTTTTGGT+AGG + chr5_2:8491916-8491935 None:intergenic 40.0%
AAAATGATGCATGGACATCG+GGG + chr5_2:8492092-8492111 None:intergenic 40.0%
!!! GAGGGTACTTTTGGAAACTT+TGG - chr5_2:8492232-8492251 Msa0754790:intron 40.0%
GATTGAACCAAGTCCAAATG+GGG - chr5_2:8487615-8487634 Msa0754790:intron 40.0%
TCCAAATGGGGATACCTTAT+TGG - chr5_2:8492316-8492335 Msa0754790:intron 40.0%
! TCCAATAAGGTATCCCCATT+TGG + chr5_2:8492320-8492339 None:intergenic 40.0%
CCCATCCAAGAATTCCAATA+AGG + chr5_2:8492333-8492352 None:intergenic 40.0%
TGGGTCTAAACTAGTTGCAA+AGG - chr5_2:8492349-8492368 Msa0754790:intron 40.0%
AATCCCATCCACTTAGCTAT+CGG + chr5_2:8488002-8488021 None:intergenic 40.0%
GCACAATGACCAACAAACTT+TGG + chr5_2:8492711-8492730 None:intergenic 40.0%
!!! ATGGACAACCTTTTGAAGCA+CGG - chr5_2:8492757-8492776 Msa0754790:intron 40.0%
TAATTCACCCGTGCTTCAAA+AGG + chr5_2:8492768-8492787 None:intergenic 40.0%
TAGACTTTGGTTGGAGAAAC+AGG + chr5_2:8492825-8492844 None:intergenic 40.0%
TTTCTCCAACCAAAGTCTAC+TGG - chr5_2:8492826-8492845 Msa0754790:intron 40.0%
GCAGATAAACCAGTAGACTT+TGG + chr5_2:8492838-8492857 None:intergenic 40.0%
TCCTAAAATAACCGAGCCAT+CGG - chr5_2:8492957-8492976 Msa0754790:intron 40.0%
CTAAGGATCTAGTGGAAAAC+TGG - chr5_2:8492995-8493014 Msa0754790:intron 40.0%
GTCCTGATTATAGTGTCATC+CGG + chr5_2:8493054-8493073 None:intergenic 40.0%
TATAATCAGGACTCCGTTGA+TGG - chr5_2:8493062-8493081 Msa0754790:CDS 40.0%
! GAAACAGGTGGACTTATTGA+TGG + chr5_2:8493102-8493121 None:intergenic 40.0%
ACCCAATGACTCCAAATCTT+GGG - chr5_2:8493157-8493176 Msa0754790:intron 40.0%
ATGGTTAGTGGAAATATGCG+CGG + chr5_2:8493303-8493322 None:intergenic 40.0%
ATACCTAAGCTAGTAAGGCT+TGG - chr5_2:8493396-8493415 Msa0754790:intron 40.0%
AAATTAGTGTGCTCCAGCAA+TGG + chr5_2:8489540-8489559 None:intergenic 40.0%
AAGGCTGACAACACAATGAA+AGG - chr5_2:8493473-8493492 Msa0754790:intron 40.0%
ATTCAGGTATACATAGGGTG+GGG + chr5_2:8493559-8493578 None:intergenic 40.0%
CTATCTATAACGTCGAGTGG+TGG + chr5_2:8485975-8485994 None:intergenic 45.0%
GTACGACAAGGCAATGATGT+AGG + chr5_2:8486072-8486091 None:intergenic 45.0%
TTGCCTTGTCGTACCAGAAT+TGG - chr5_2:8486078-8486097 Msa0754790:three_prime_UTR 45.0%
GATCCAATTCTGGTACGACA+AGG + chr5_2:8486084-8486103 None:intergenic 45.0%
GAACATGTTGTAATCGTGGG+TGG - chr5_2:8486156-8486175 Msa0754790:three_prime_UTR 45.0%
TCCTCATATTAGCCGTGATC+CGG + chr5_2:8486431-8486450 None:intergenic 45.0%
!! GAATTTCCAGGCTTGGTGTT+CGG - chr5_2:8486500-8486519 Msa0754790:CDS 45.0%
CAGTCAGAGTCACTTAGAAC+TGG - chr5_2:8486538-8486557 Msa0754790:CDS 45.0%
TCAGAGTCACTTAGAACTGG+TGG - chr5_2:8486541-8486560 Msa0754790:CDS 45.0%
TCACCCTTTCCAAAAATGGG+TGG - chr5_2:8486572-8486591 Msa0754790:CDS 45.0%
!! CCTCCACCCATTTTTGGAAA+GGG + chr5_2:8486578-8486597 None:intergenic 45.0%
CCTTTCCAAAAATGGGTGGA+GGG - chr5_2:8486576-8486595 Msa0754790:CDS 45.0%
!! TGGAGGGCACTTGATTCAAT+TGG - chr5_2:8486592-8486611 Msa0754790:CDS 45.0%
TATATCAGCTGAGCTTGAGC+TGG - chr5_2:8486710-8486729 Msa0754790:CDS 45.0%
!! GAGTTTTATGGTGCACTGAC+CGG + chr5_2:8486927-8486946 None:intergenic 45.0%
GAAACTGAGACTAAGTCGTC+GGG - chr5_2:8486958-8486977 Msa0754790:CDS 45.0%
ACTCACACTCTTCAACTACC+CGG - chr5_2:8487142-8487161 Msa0754790:intron 45.0%
!!! GTCTTTTGTAAAAGGTGCCC+GGG + chr5_2:8487163-8487182 None:intergenic 45.0%
TGGACAAGACCTCGAAAATG+TGG - chr5_2:8487210-8487229 Msa0754790:intron 45.0%
GAAACATTAGCACGCCACAT+AGG - chr5_2:8487242-8487261 Msa0754790:intron 45.0%
GCATACATTCGACTCCTATG+TGG + chr5_2:8487259-8487278 None:intergenic 45.0%
GAGTCGAATGTATGCCATGT+TGG - chr5_2:8487264-8487283 Msa0754790:intron 45.0%
TCGAATGTATGCCATGTTGG+AGG - chr5_2:8487267-8487286 Msa0754790:intron 45.0%
GGTATGTTAGACCTCCAACA+TGG + chr5_2:8487281-8487300 None:intergenic 45.0%
AGCCCCTAGTTAAGGCTAAA+GGG + chr5_2:8487302-8487321 None:intergenic 45.0%
TAGCCCCTAGTTAAGGCTAA+AGG + chr5_2:8487303-8487322 None:intergenic 45.0%
ATTGCTTGAGAATCAAGGCC+AGG - chr5_2:8487350-8487369 Msa0754790:CDS 45.0%
TTGCTTGAGAATCAAGGCCA+GGG - chr5_2:8487351-8487370 Msa0754790:CDS 45.0%
! AAGGCGTCTTCATAGGTTGA+GGG + chr5_2:8487394-8487413 None:intergenic 45.0%
!! AAAGGCGTCTTCATAGGTTG+AGG + chr5_2:8487395-8487414 None:intergenic 45.0%
!!! GAGGGTACTTTTGGAAACCT+TGG - chr5_2:8487543-8487562 Msa0754790:intron 45.0%
! AAGGTATCCCCATTTGGACT+TGG + chr5_2:8487625-8487644 None:intergenic 45.0%
TCCAAATGGGGATACCTTCT+TGG - chr5_2:8487627-8487646 Msa0754790:intron 45.0%
!! TCCAAGAAGGTATCCCCATT+TGG + chr5_2:8487631-8487650 None:intergenic 45.0%
CCCATCCAAGAATTCCAAGA+AGG + chr5_2:8487644-8487663 None:intergenic 45.0%
GGCCAATAATCATGAAGCTC+TGG - chr5_2:8487906-8487925 Msa0754790:intron 45.0%
CAGATTGTAATAGGGTGCGA+CGG - chr5_2:8487966-8487985 Msa0754790:intron 45.0%
GTTGGTTATTGTGCTTTCCG+TGG - chr5_2:8488038-8488057 Msa0754790:intron 45.0%
AGGTTGTCCATCTGAATAGG+AGG + chr5_2:8488069-8488088 None:intergenic 45.0%
! TGGACAACCTTTTCAACCAC+AGG - chr5_2:8488079-8488098 Msa0754790:intron 45.0%
TATGGAAAAGGGTTACGTGC+AGG - chr5_2:8488113-8488132 Msa0754790:CDS 45.0%
GGTGCTAAAGAAGCAAGCTA+AGG - chr5_2:8488302-8488321 Msa0754790:intron 45.0%
! TCTAGTAGAAAACTGGCCTC+CGG - chr5_2:8488326-8488345 Msa0754790:CDS 45.0%
! TGACTCCATTGATGGATCGA+TGG - chr5_2:8488394-8488413 Msa0754790:CDS 45.0%
CAAAGCCATCGATCCATCAA+TGG + chr5_2:8488402-8488421 None:intergenic 45.0%
! CATTGATGGATCGATGGCTT+TGG - chr5_2:8488400-8488419 Msa0754790:CDS 45.0%
! ACTCTACCTCTAGAAACAGG+TGG + chr5_2:8488438-8488457 None:intergenic 45.0%
AGAGGTAGAGTTGTACTCGT+TGG - chr5_2:8488447-8488466 Msa0754790:CDS 45.0%
! TGCCCAAGATTTGGAGTCAT+TGG + chr5_2:8488486-8488505 None:intergenic 45.0%
ATGACTCCAAATCTTGGGCA+AGG - chr5_2:8488486-8488505 Msa0754790:CDS 45.0%
AACCATACTGGCAAACCTTG+TGG - chr5_2:8488641-8488660 Msa0754790:intron 45.0%
ACCATACTGGCAAACCTTGT+GGG - chr5_2:8488642-8488661 Msa0754790:intron 45.0%
TCCTAACATAACACACCAGC+GGG + chr5_2:8488689-8488708 None:intergenic 45.0%
ATACCTAAGCTAGCAAGGCT+TGG - chr5_2:8489513-8489532 Msa0754790:intron 45.0%
GCGGTTATGCACATCTTTCA+TGG - chr5_2:8489823-8489842 Msa0754790:intron 45.0%
TGAGGAAAGGATCCCTCTTA+CGG - chr5_2:8489951-8489970 Msa0754790:intron 45.0%
! ATCGTATTGCCGATTGAGCT+TGG + chr5_2:8490346-8490365 None:intergenic 45.0%
TGACTCGTTCTTGAAACGCA+TGG - chr5_2:8490754-8490773 Msa0754790:intron 45.0%
GACTCGTTCTTGAAACGCAT+GGG - chr5_2:8490755-8490774 Msa0754790:intron 45.0%
! GCATGTTTGTGAAATGGGCT+CGG + chr5_2:8490813-8490832 None:intergenic 45.0%
GCCACATAAACTAGTGGTAG+TGG + chr5_2:8491082-8491101 None:intergenic 45.0%
CTTTGGGCCACATAAACTAG+TGG + chr5_2:8491088-8491107 None:intergenic 45.0%
GTGTGTTGTGTGTTCAGCTT+TGG + chr5_2:8491105-8491124 None:intergenic 45.0%
CTACAGGTATTACCGTTGAG+TGG + chr5_2:8491138-8491157 None:intergenic 45.0%
! ACTTCTGAGAGCTCCAATTC+TGG + chr5_2:8491254-8491273 None:intergenic 45.0%
GGCTCAATCTTCAGTCCAAA+AGG - chr5_2:8491288-8491307 Msa0754790:intron 45.0%
GAACATGTTGTAATCGTGGG+TGG - chr5_2:8486156-8486175 Msa0754790:three_prime_UTR 45.0%
GCTAGAGTTGAAACCTGTGA+AGG + chr5_2:8491366-8491385 None:intergenic 45.0%
CCTGAGAATTCAACACAAGC+AGG + chr5_2:8491434-8491453 None:intergenic 45.0%
CCTGCTTGTGTTGAATTCTC+AGG - chr5_2:8491431-8491450 Msa0754790:intron 45.0%
!! GAATTCTCAGGCTTGGTGTT+CGG - chr5_2:8491443-8491462 Msa0754790:intron 45.0%
!! TCACCCTTTTCAAGAATGGG+TGG - chr5_2:8491515-8491534 Msa0754790:CDS 45.0%
CACTCCACCCATTCTTGAAA+AGG + chr5_2:8491522-8491541 None:intergenic 45.0%
ATATCAGCTGTACAGGATGG+TGG - chr5_2:8491684-8491703 Msa0754790:CDS 45.0%
TCAGTGTCATGTACTCGTGT+TGG + chr5_2:8491843-8491862 None:intergenic 45.0%
!! AGTTTTGCCACTGGCCTATT+TGG + chr5_2:8492022-8492041 None:intergenic 45.0%
! AAGGTATCCCCATTTGGACT+TGG + chr5_2:8487625-8487644 None:intergenic 45.0%
CAGGGTCATAACCAATCATG+TGG + chr5_2:8492532-8492551 None:intergenic 45.0%
CAGATTGTAATAGGGTGCGA+TGG - chr5_2:8487966-8487985 Msa0754790:intron 45.0%
TTCGATCACCGATAGCTAAG+TGG - chr5_2:8492670-8492689 Msa0754790:intron 45.0%
ATCACCGATAGCTAAGTGGA+TGG - chr5_2:8492674-8492693 Msa0754790:intron 45.0%
TCACCGATAGCTAAGTGGAT+GGG - chr5_2:8492675-8492694 Msa0754790:intron 45.0%
AGGTTGTCCATCTGAATAGG+AGG + chr5_2:8488069-8488088 None:intergenic 45.0%
!!! TGGACAACCTTTTGAAGCAC+GGG - chr5_2:8492758-8492777 Msa0754790:intron 45.0%
GCACGGGTGAATTACATCTA+CGG - chr5_2:8492774-8492793 Msa0754790:intron 45.0%
TGCTTCAACAGTTCATCTCC+AGG - chr5_2:8492855-8492874 Msa0754790:intron 45.0%
!!! ACCGATGGCTCGGTTATTTT+AGG + chr5_2:8492961-8492980 None:intergenic 45.0%
GGTGCTAAAGAAGCAAGCTA+AGG - chr5_2:8488302-8488321 Msa0754790:intron 45.0%
GAAGCAAGCTAAGGATCTAG+TGG - chr5_2:8488311-8488330 Msa0754790:intron 45.0%
CACCGGATGACACTATAATC+AGG - chr5_2:8493049-8493068 Msa0754790:CDS 45.0%
CAAAGCCATCGATCCATCAA+CGG + chr5_2:8488402-8488421 None:intergenic 45.0%
!! ATAAGTCCACCTGTTTCTGC+AGG - chr5_2:8493105-8493124 Msa0754790:CDS 45.0%
ACAACTCTACCTGCAGAAAC+AGG + chr5_2:8493117-8493136 None:intergenic 45.0%
CACCCAATGACTCCAAATCT+TGG - chr5_2:8493156-8493175 Msa0754790:intron 45.0%
! GCCCAAGATTTGGAGTCATT+GGG + chr5_2:8488485-8488504 None:intergenic 45.0%
! TGCCCAAGATTTGGAGTCAT+TGG + chr5_2:8488486-8488505 None:intergenic 45.0%
ATGACTCCAAATCTTGGGCA+AGG - chr5_2:8488486-8488505 Msa0754790:CDS 45.0%
ATGTTTGCCCGTATGGTTAG+TGG + chr5_2:8493315-8493334 None:intergenic 45.0%
AACCATACGGGCAAACATTG+TGG - chr5_2:8493317-8493336 Msa0754790:intron 45.0%
ACCATACGGGCAAACATTGT+GGG - chr5_2:8493318-8493337 Msa0754790:intron 45.0%
TTCCTAACAGAACACACCAG+CGG + chr5_2:8493366-8493385 None:intergenic 45.0%
CATGTTGTAATCGTGGGTGG+TGG - chr5_2:8486159-8486178 Msa0754790:three_prime_UTR 50.0%
GAAGGGATAGAGCAGTTGCA+AGG + chr5_2:8486194-8486213 None:intergenic 50.0%
CAACTGCTCTATCCCTTCAC+AGG - chr5_2:8486196-8486215 Msa0754790:three_prime_UTR 50.0%
GTGTGTGTGTGTGTGTGTGT+TGG - chr5_2:8486372-8486391 Msa0754790:CDS 50.0%
! GTGTGTGTGTGTGTTGGTGT+TGG - chr5_2:8486386-8486405 Msa0754790:CDS 50.0%
TATTAGCCGTGATCCGGTGT+CGG + chr5_2:8486425-8486444 None:intergenic 50.0%
ACCGGATCACGGCTAATATG+AGG - chr5_2:8486427-8486446 Msa0754790:CDS 50.0%
CCCTTTCCAAAAATGGGTGG+AGG - chr5_2:8486575-8486594 Msa0754790:CDS 50.0%
!! CCCTCCACCCATTTTTGGAA+AGG + chr5_2:8486579-8486598 None:intergenic 50.0%
! AAGTGCCCTCCACCCATTTT+TGG + chr5_2:8486584-8486603 None:intergenic 50.0%
CTCACACTCTTCAACTACCC+GGG - chr5_2:8487143-8487162 Msa0754790:intron 50.0%
! GAGCTCAAGCCACATTTTCG+AGG + chr5_2:8487222-8487241 None:intergenic 50.0%
GGAACAGTAGCCCCTAGTTA+AGG + chr5_2:8487310-8487329 None:intergenic 50.0%
!!! AGTGGAGAGGAGGGTACTTT+TGG - chr5_2:8487534-8487553 Msa0754790:intron 50.0%
CTTGGATGGACAACTACCTC+CGG - chr5_2:8487561-8487580 Msa0754790:intron 50.0%
TTCGATCGCCGATAGCTAAG+TGG - chr5_2:8487991-8488010 Msa0754790:intron 50.0%
ATCGCCGATAGCTAAGTGGA+TGG - chr5_2:8487995-8488014 Msa0754790:intron 50.0%
TCGCCGATAGCTAAGTGGAT+GGG - chr5_2:8487996-8488015 Msa0754790:intron 50.0%
CTGAATAGGAGGCAAGTCCA+CGG + chr5_2:8488058-8488077 None:intergenic 50.0%
GGACTTGCCTCCTATTCAGA+TGG - chr5_2:8488059-8488078 Msa0754790:intron 50.0%
TCCTCAAACAACCGAGCCAT+CGG - chr5_2:8488281-8488300 Msa0754790:intron 50.0%
!! CTTCTTTAGCACCGATGGCT+CGG + chr5_2:8488295-8488314 None:intergenic 50.0%
! GCTTGCTTCTTTAGCACCGA+TGG + chr5_2:8488300-8488319 None:intergenic 50.0%
TTGTACTCGTTGGAGACGCT+TGG - chr5_2:8488457-8488476 Msa0754790:CDS 50.0%
CAAGCTCCTTGCCCAAGATT+TGG + chr5_2:8488495-8488514 None:intergenic 50.0%
!! AGGAGCTTGTTGTGCTCTTG+AGG - chr5_2:8488506-8488525 Msa0754790:CDS 50.0%
TTGTGCTCTTGAGGATGCAG+TGG - chr5_2:8488515-8488534 Msa0754790:intron 50.0%
ACCCACAAGGTTTGCCAGTA+TGG + chr5_2:8488646-8488665 None:intergenic 50.0%
ACTGCGAAATCGAACCCACA+AGG + chr5_2:8488659-8488678 None:intergenic 50.0%
TTGTGGGTTCGATTTCGCAG+TGG - chr5_2:8488658-8488677 Msa0754790:intron 50.0%
TGTGGGTTCGATTTCGCAGT+GGG - chr5_2:8488659-8488678 Msa0754790:intron 50.0%
ACCCGCTGGTGTGTTATGTT+AGG - chr5_2:8488685-8488704 Msa0754790:intron 50.0%
ATATTGTCAGGGACAGAGCG+AGG - chr5_2:8488712-8488731 Msa0754790:intron 50.0%
! ATTTTCCCGGCAAATGCCCA+TGG - chr5_2:8490700-8490719 Msa0754790:intron 50.0%
!! AGGCCTTAGTGGTTGGTGAA+AGG + chr5_2:8490781-8490800 None:intergenic 50.0%
! ACTCAAGTGTCGCTCCAGAA+AGG + chr5_2:8490894-8490913 None:intergenic 50.0%
ACAATCTCGCCACCACTCAA+CGG - chr5_2:8491123-8491142 Msa0754790:intron 50.0%
CAGGTATTACCGTTGAGTGG+TGG + chr5_2:8491135-8491154 None:intergenic 50.0%
AGACGAGGTTGTTGTAGCCA+TGG + chr5_2:8491200-8491219 None:intergenic 50.0%
CATGTTGTAATCGTGGGTGG+TGG - chr5_2:8486159-8486178 Msa0754790:three_prime_UTR 50.0%
GAAGGGATAGAGCAGTTGCA+AGG + chr5_2:8486194-8486213 None:intergenic 50.0%
CAACTGCTCTATCCCTTCAC+AGG - chr5_2:8486196-8486215 Msa0754790:three_prime_UTR 50.0%
CAGTCAGAGTCACTTCGAAC+AGG - chr5_2:8491481-8491500 Msa0754790:intron 50.0%
TCAGAGTCACTTCGAACAGG+TGG - chr5_2:8491484-8491503 Msa0754790:intron 50.0%
! ATGGTGGTGAAGTCTGAGGA+TGG - chr5_2:8491700-8491719 Msa0754790:CDS 50.0%
! TTGCCACTGGCCTATTTGGT+AGG + chr5_2:8492018-8492037 None:intergenic 50.0%
ACGGATATTGTGCAGCCAAG+AGG - chr5_2:8492193-8492212 Msa0754790:intron 50.0%
!!! AGTGGAGAGGAGGGTACTTT+TGG - chr5_2:8487534-8487553 Msa0754790:intron 50.0%
GTTGGTCATTGTGCTTTCCG+TGG - chr5_2:8492717-8492736 Msa0754790:intron 50.0%
CTGAATAGGAGGCAAGTCCA+CGG + chr5_2:8488058-8488077 None:intergenic 50.0%
GGACTTGCCTCCTATTCAGA+TGG - chr5_2:8488059-8488078 Msa0754790:intron 50.0%
!! CTTCTTTAGCACCGATGGCT+CGG + chr5_2:8488295-8488314 None:intergenic 50.0%
! GCTTGCTTCTTTAGCACCGA+TGG + chr5_2:8488300-8488319 None:intergenic 50.0%
! CGTTGATGGATCGATGGCTT+TGG - chr5_2:8493076-8493095 Msa0754790:CDS 50.0%
ACTCTACCTGCAGAAACAGG+TGG + chr5_2:8493114-8493133 None:intergenic 50.0%
GCAGGTAGAGTTGTACTCGT+TGG - chr5_2:8493123-8493142 Msa0754790:intron 50.0%
TTGTACTCGTTGGAGACGCT+TGG - chr5_2:8488457-8488476 Msa0754790:CDS 50.0%
CATGCTCCTTGCCCAAGATT+TGG + chr5_2:8493171-8493190 None:intergenic 50.0%
! AGGAGCATGTTGTGCTCTTG+AGG - chr5_2:8493182-8493201 Msa0754790:intron 50.0%
TTGTGCTCTTGAGGATGCAG+TGG - chr5_2:8488515-8488534 Msa0754790:intron 50.0%
ACCCACAATGTTTGCCCGTA+TGG + chr5_2:8493322-8493341 None:intergenic 50.0%
ACGGGCAAACATTGTGGGTT+CGG - chr5_2:8493323-8493342 Msa0754790:intron 50.0%
TCCTAACAGAACACACCAGC+GGG + chr5_2:8493365-8493384 None:intergenic 50.0%
! GGACCAAGCCTTACTAGCTT+AGG + chr5_2:8493402-8493421 None:intergenic 50.0%
! AGTAAGGCTTGGTCCATTGC+TGG - chr5_2:8493407-8493426 Msa0754790:intron 50.0%
CAAAGACCGAACACCAAGCC+TGG + chr5_2:8486509-8486528 None:intergenic 55.0%
!! CAGGCTTGGTGTTCGGTCTT+TGG - chr5_2:8486507-8486526 Msa0754790:CDS 55.0%
! TGGTGTTCGGTCTTTGGTGC+TGG - chr5_2:8486513-8486532 Msa0754790:CDS 55.0%
ACTGAGACTAAGTCGTCGGG+TGG - chr5_2:8486961-8486980 Msa0754790:CDS 55.0%
TGGGCTATTGTGCAGCCAAG+AGG - chr5_2:8487504-8487523 Msa0754790:intron 55.0%
CGGAGGTAGTTGTCCATCCA+AGG + chr5_2:8487563-8487582 None:intergenic 55.0%
!! ACCGATGGCTCGGTTGTTTG+AGG + chr5_2:8488285-8488304 None:intergenic 55.0%
!! CTAAGTGCCTAGCTCTGCGA+GGG - chr5_2:8489388-8489407 Msa0754790:intron 55.0%
!! TAAGTGCCTAGCTCTGCGAG+GGG - chr5_2:8489389-8489408 Msa0754790:intron 55.0%
! GGACCAAGCCTTGCTAGCTT+AGG + chr5_2:8489519-8489538 None:intergenic 55.0%
! AGCAAGGCTTGGTCCATTGC+TGG - chr5_2:8489524-8489543 Msa0754790:intron 55.0%
AGTCAAGCAGGAGTGGCCAT+GGG + chr5_2:8490719-8490738 None:intergenic 55.0%
AAGTCAAGCAGGAGTGGCCA+TGG + chr5_2:8490720-8490739 None:intergenic 55.0%
GGGCCTTTCACCAACCACTA+AGG - chr5_2:8490775-8490794 Msa0754790:intron 55.0%
GTCTTTGCGGGATGACTGTG+AGG - chr5_2:8491013-8491032 Msa0754790:intron 55.0%
TGGTGTTCGGTCTCTTGTGC+TGG - chr5_2:8491456-8491475 Msa0754790:intron 55.0%
! CAGGATGGTGGTGAAGTCTG+AGG - chr5_2:8491696-8491715 Msa0754790:CDS 55.0%
! CCACTGGCCTATTTGGTAGG+AGG + chr5_2:8492015-8492034 None:intergenic 55.0%
CCTCCTACCAAATAGGCCAG+TGG - chr5_2:8492012-8492031 Msa0754790:CDS 55.0%
! ATGGGTGCGAGTTTTGCCAC+TGG + chr5_2:8492031-8492050 None:intergenic 55.0%
ATGCATGGACATCGGGGAGT+GGG + chr5_2:8492086-8492105 None:intergenic 55.0%
TACGGAAAAGGGTTACGCGC+AGG - chr5_2:8492792-8492811 Msa0754790:intron 55.0%
! GGACTCCGTTGATGGATCGA+TGG - chr5_2:8493070-8493089 Msa0754790:CDS 55.0%
TTGTGGGTTCGGCTTTGCAG+TGG - chr5_2:8493334-8493353 Msa0754790:intron 55.0%
TGTGGGTTCGGCTTTGCAGT+GGG - chr5_2:8493335-8493354 Msa0754790:intron 55.0%
ACCCGCTGGTGTGTTCTGTT+AGG - chr5_2:8493361-8493380 Msa0754790:intron 55.0%
! ATCGTGGGTGGTGGCATAGC+AGG - chr5_2:8486168-8486187 Msa0754790:three_prime_UTR 60.0%
CCACGATACGTGTCCGACAC+CGG - chr5_2:8486409-8486428 Msa0754790:CDS 60.0%
ACGTGTCCGACACCGGATCA+CGG - chr5_2:8486416-8486435 Msa0754790:CDS 60.0%
TCTCCACTGCACGCACCTCT+TGG + chr5_2:8487522-8487541 None:intergenic 60.0%
! AAGAGGTGCGTGCAGTGGAG+AGG - chr5_2:8487521-8487540 Msa0754790:intron 60.0%
CCTCGCAGAGCTAGGCACTT+AGG + chr5_2:8489390-8489409 None:intergenic 60.0%
!! CCTAAGTGCCTAGCTCTGCG+AGG - chr5_2:8489387-8489406 Msa0754790:intron 60.0%
AGGGGAACTCGCCATCCCAA+AGG + chr5_2:8489456-8489475 None:intergenic 60.0%
AGTGGCCATGGGCATTTGCC+GGG + chr5_2:8490708-8490727 None:intergenic 60.0%
GAGTGGCCATGGGCATTTGC+CGG + chr5_2:8490709-8490728 None:intergenic 60.0%
! ATCGTGGGTGGTGGCATTGC+AGG - chr5_2:8491322-8491341 Msa0754790:intron 60.0%
GATGCATGGACATCGGGGAG+TGG + chr5_2:8492087-8492106 None:intergenic 60.0%
TCTCCACTGCACGCACCTCT+TGG + chr5_2:8487522-8487541 None:intergenic 60.0%
! AAGAGGTGCGTGCAGTGGAG+AGG - chr5_2:8487521-8487540 Msa0754790:intron 60.0%
TTTGCAGTGGGACAACCCGC+TGG - chr5_2:8493347-8493366 Msa0754790:intron 60.0%
! CCGGTGTCGGACACGTATCG+TGG + chr5_2:8486412-8486431 None:intergenic 65.0%
! CAGCCAAGAGGTGCGTGCAG+TGG - chr5_2:8487516-8487535 Msa0754790:intron 65.0%
AGGTGCGTGCAGTGGAGAGG+AGG - chr5_2:8487524-8487543 Msa0754790:intron 65.0%
GGTGCGTGCAGTGGAGAGGA+GGG - chr5_2:8487525-8487544 Msa0754790:intron 65.0%
TTCGCAGTGGGACAACCCGC+TGG - chr5_2:8488671-8488690 Msa0754790:intron 65.0%
TATCCGCCCCTCGCAGAGCT+AGG + chr5_2:8489398-8489417 None:intergenic 65.0%
! CAGCCAAGAGGTGCGTGCAG+TGG - chr5_2:8487516-8487535 Msa0754790:intron 65.0%
AGGTGCGTGCAGTGGAGAGG+AGG - chr5_2:8487524-8487543 Msa0754790:intron 65.0%
GGTGCGTGCAGTGGAGAGGA+GGG - chr5_2:8487525-8487544 Msa0754790:intron 65.0%
!! GTGCCTAGCTCTGCGAGGGG+CGG - chr5_2:8489392-8489411 Msa0754790:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 8485949 8493742 8485949 ID=Msa0754790;Name=Msa0754790
chr5_2 mRNA 8485949 8493742 8485949 ID=Msa0754790-mRNA-1;Parent=Msa0754790;Name=Msa0754790-mRNA-1;_AED=0.20;_eAED=0.20;_QI=78|0.44|0.6|1|0.77|0.8|10|275|671
chr5_2 exon 8485949 8486735 8485949 ID=Msa0754790-mRNA-1:exon:3902;Parent=Msa0754790-mRNA-1
chr5_2 exon 8486815 8487043 8486815 ID=Msa0754790-mRNA-1:exon:3901;Parent=Msa0754790-mRNA-1
chr5_2 exon 8487321 8487483 8487321 ID=Msa0754790-mRNA-1:exon:3900;Parent=Msa0754790-mRNA-1
chr5_2 exon 8488092 8488238 8488092 ID=Msa0754790-mRNA-1:exon:3899;Parent=Msa0754790-mRNA-1
chr5_2 exon 8488320 8488533 8488320 ID=Msa0754790-mRNA-1:exon:3898;Parent=Msa0754790-mRNA-1
chr5_2 exon 8491494 8491722 8491494 ID=Msa0754790-mRNA-1:exon:3897;Parent=Msa0754790-mRNA-1
chr5_2 exon 8492010 8492172 8492010 ID=Msa0754790-mRNA-1:exon:3896;Parent=Msa0754790-mRNA-1
chr5_2 exon 8492872 8492937 8492872 ID=Msa0754790-mRNA-1:exon:3895;Parent=Msa0754790-mRNA-1
chr5_2 exon 8493035 8493136 8493035 ID=Msa0754790-mRNA-1:exon:3894;Parent=Msa0754790-mRNA-1
chr5_2 exon 8493474 8493742 8493474 ID=Msa0754790-mRNA-1:exon:3893;Parent=Msa0754790-mRNA-1
chr5_2 five_prime_UTR 8493665 8493742 8493665 ID=Msa0754790-mRNA-1:five_prime_utr;Parent=Msa0754790-mRNA-1
chr5_2 CDS 8493474 8493664 8493474 ID=Msa0754790-mRNA-1:cds;Parent=Msa0754790-mRNA-1
chr5_2 CDS 8493035 8493136 8493035 ID=Msa0754790-mRNA-1:cds;Parent=Msa0754790-mRNA-1
chr5_2 CDS 8492872 8492937 8492872 ID=Msa0754790-mRNA-1:cds;Parent=Msa0754790-mRNA-1
chr5_2 CDS 8492010 8492172 8492010 ID=Msa0754790-mRNA-1:cds;Parent=Msa0754790-mRNA-1
chr5_2 CDS 8491494 8491722 8491494 ID=Msa0754790-mRNA-1:cds;Parent=Msa0754790-mRNA-1
chr5_2 CDS 8488320 8488533 8488320 ID=Msa0754790-mRNA-1:cds;Parent=Msa0754790-mRNA-1
chr5_2 CDS 8488092 8488238 8488092 ID=Msa0754790-mRNA-1:cds;Parent=Msa0754790-mRNA-1
chr5_2 CDS 8487321 8487483 8487321 ID=Msa0754790-mRNA-1:cds;Parent=Msa0754790-mRNA-1
chr5_2 CDS 8486815 8487043 8486815 ID=Msa0754790-mRNA-1:cds;Parent=Msa0754790-mRNA-1
chr5_2 CDS 8486224 8486735 8486224 ID=Msa0754790-mRNA-1:cds;Parent=Msa0754790-mRNA-1
chr5_2 three_prime_UTR 8485949 8486223 8485949 ID=Msa0754790-mRNA-1:three_prime_utr;Parent=Msa0754790-mRNA-1
Gene Sequence

>Msa0754790

ATGGCTACAACATTCTCGTCTTTTATGTTTCTTAAACGAATTCCTACATCATTGCCTTGTCGTACCAGAATTGGATCCCTACGATATTCCAAATTAACAATCAAGGCTCAATCTTCTGATGTCCGAAAGGAACATGTTGTAATCGTGGGTGGTGGCATAGCAGGCCTTGCAACTGCTCTATCCCTTCACAGAACTGGTGGAACTTCACTCACCCTTTCCAAAAATGGGTGGAGGGCACTTGATTCAATTGGAGTAGCAAATTGTCTCAGAACTCAATATTTAGAAATTCAAGGGATTGTGTTGAAATCTGAGGATGGAAAAGAACTACGTGCTTTGAATTTCAAAGAAAAGGACGAAAGCCAAGAGGTGCGTGCAGTGGAGAGGAGGGTACTTTTGGAAACCTTGGATGGACAACTACCTCCGGATACCATTCAATATTCTTCACGGTTGGTCAAGATTGAACCAAGTCCAAATGGGGATACCTTCTTGGAATTCTTGGATGGGTCTAAAATACTTGCAAAGATTGTAATAGGGTGCGACGGCATTCGATCGCCGATAGCTAAGTGGATGGGATTTTCTGAGCCAAAGTACGTTGGTTATTGTGCTTTCCGTGGACTTGCCTCCTATTCAGATGGACAACCTTTTCAACCACAGGTGAATTACATCTATGGAAAAGGGTTACGTGCAGGATATGTTCCTGTTTCTCCAACCAAAGTGTATTGGTTTGTCATCTTCAATAGTTCATCTGCAGCTAGTAGCTACAATCAAACACAATCTGAATTGAACATGTCCATGGCTACAACAACCTCGTCTTTTATGATTCTTAAATCTCCAACTTGTCATACCAGAATTGGAGCTCTCAGAAGTTCCAAATTAATCAAGGCTCAATCTTCAGTCCAAAAGGAACATGTTGTAATCGTGGGTGGTGGCATTGCAGGCCTTGCAACTGCTCTATCCCTTCACAGGCTTGGTGTTCGGTCTCTTGTGCTGGAGCAGTCAGAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAGAATGGGTGGAGTGTACTTGATTCAATTGGAGTAGCTAATTATCTTAGAACTCAATATTTAGAAATTCAAGGCCAAGAGGTGCGTGCAGTGGAGAGGAGGGTACTTTTGGAAACTTTGGCTGCTCAGTTGCCTCCTGATAGCATTCAATATTCTTCACGGTTGGTCAAGATTGAACCAAGTCCAAATGGGGATACCTTATTGGAATTCTTGGATGGGTCTAAACTAGTTGCAAAGATTGTAATAGGGTGCGATGGAATTCGATCACCGATAGCTAAGTGGATGGGATTTTCTGAGCCAAAGTTTGTTGGTCATTGTGCTTTCCGTGGACTTGCCTCCTATTCAGATGGACAACCTTTTGAAGCACGGGTGAATTACATCTACGGAAAAGGGTTACGCGCAGGATACGTTCCTGTTTCTCCAACCAAAGTCTACTGGTTTATCTGCTTCAACAGTTCATCTCCAGGTCCTAAAATAACCGAGCCATCGGTGCTAAAGAAGCAAGCTAAGGATCTAGTGGAAAACTGGCCTCCAGAGCTACTAAACATAATGAATTCTACACCGGATGACACTATAATCAGGACTCCGTTGATGGATCGATGGCTTTGGCCATCAATAAGTCCACCTGTTTCTGCAGGTAGAGTTGTACTCGTTGGAGACGCTTGGCACCCAATGACTCCAAATCTTGGGCAAGGAGCATGTTGTGCTCTTGAGGATGCAGTGGTTCTTGCTAAAAAGCTTGCTGCAGCAATCGATTCTGATGATGCTTCTATCGAAGACGCTTTTAGAGAATATGGCAATGAAAGATGGCCGCGCATATTTCCACTAACCATACGGGCAAACATTGTGGGTTCGGCTTTGCAGTGGGACAACCCGCTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTAAGGCTTGGTCCATTGCTGGAGCACACTAATTTTACTAGTGAGAGTCTACAAAGATGA
Protein sequence

>Msa0754790

MATTFSSFMFLKRIPTSLPCRTRIGSLRYSKLTIKAQSSDVRKEHVVIVGGGIAGLATALSLHRTGGTSLTLSKNGWRALDSIGVANCLRTQYLEIQGIVLKSEDGKELRALNFKEKDESQEVRAVERRVLLETLDGQLPPDTIQYSSRLVKIEPSPNGDTFLEFLDGSKILAKIVIGCDGIRSPIAKWMGFSEPKYVGYCAFRGLASYSDGQPFQPQVNYIYGKGLRAGYVPVSPTKVYWFVIFNSSSAASSYNQTQSELNMSMATTTSSFMILKSPTCHTRIGALRSSKLIKAQSSVQKEHVVIVGGGIAGLATALSLHRLGVRSLVLEQSESLRTGGTSLTLFKNGWSVLDSIGVANYLRTQYLEIQGQEVRAVERRVLLETLAAQLPPDSIQYSSRLVKIEPSPNGDTLLEFLDGSKLVAKIVIGCDGIRSPIAKWMGFSEPKFVGHCAFRGLASYSDGQPFEARVNYIYGKGLRAGYVPVSPTKVYWFICFNSSSPGPKITEPSVLKKQAKDLVENWPPELLNIMNSTPDDTIIRTPLMDRWLWPSISPPVSAGRVVLVGDAWHPMTPNLGQGACCALEDAVVLAKKLAAAIDSDDASIEDAFREYGNERWPRIFPLTIRANIVGSALQWDNPLVCSVRNNIVIPKLVRLGPLLEHTNFTSESLQR*