Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378040 | KEH21226.1 | 96.032 | 126 | 5 | 0 | 1 | 126 | 1 | 126 | 2.35e-79 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378040 | A0A072TVL9 | 96.032 | 126 | 5 | 0 | 1 | 126 | 1 | 126 | 1.12e-79 | 239 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa1378040 | 0.854321 | 1.330945e-61 | -8.615850e-47 |
| Msa0007990 | Msa1378040 | 0.811939 | 5.447231e-51 | -8.615850e-47 |
| Msa0018070 | Msa1378040 | 0.809643 | 1.709408e-50 | -8.615850e-47 |
| Msa0026450 | Msa1378040 | 0.808066 | 3.717032e-50 | -8.615850e-47 |
| Msa0030160 | Msa1378040 | 0.802337 | 5.885102e-49 | -8.615850e-47 |
| Msa0032080 | Msa1378040 | 0.824900 | 6.281085e-54 | -8.615850e-47 |
| Msa0042550 | Msa1378040 | 0.801523 | 8.651125e-49 | -8.615850e-47 |
| Msa0044330 | Msa1378040 | 0.800807 | 1.211991e-48 | -8.615850e-47 |
| Msa0079370 | Msa1378040 | 0.805265 | 1.450960e-49 | -8.615850e-47 |
| Msa0092410 | Msa1378040 | 0.852868 | 3.480178e-61 | -8.615850e-47 |
| Msa0100090 | Msa1378040 | 0.802575 | 5.257453e-49 | -8.615850e-47 |
| Msa1353890 | Msa1378040 | 0.836504 | 9.002845e-57 | -8.615850e-47 |
| Msa1355890 | Msa1378040 | 0.841822 | 3.762688e-58 | -8.615850e-47 |
| Msa1365270 | Msa1378040 | 0.836918 | 7.061955e-57 | -8.615850e-47 |
| Msa1367530 | Msa1378040 | 0.815545 | 8.750941e-52 | -8.615850e-47 |
| Msa1372150 | Msa1378040 | 0.816522 | 5.295056e-52 | -8.615850e-47 |
| Msa1376450 | Msa1378040 | 0.830307 | 3.160804e-55 | -8.615850e-47 |
| Msa1378040 | Msa1380220 | 0.813005 | 3.185443e-51 | -8.615850e-47 |
| Msa1378040 | Msa1383100 | 0.817738 | 2.822301e-52 | -8.615850e-47 |
| Msa1378040 | Msa1384280 | 0.818736 | 1.677534e-52 | -8.615850e-47 |
| Msa1378040 | Msa1394310 | 0.809238 | 2.088233e-50 | -8.615850e-47 |
| Msa1378040 | Msa1394380 | 0.830542 | 2.769216e-55 | -8.615850e-47 |
| Msa1378040 | Msa1405220 | 0.819359 | 1.210725e-52 | -8.615850e-47 |
| Msa1378040 | Msa1408340 | 0.992106 | 2.439569e-191 | -8.615850e-47 |
| Msa1378040 | Msa1420270 | 0.832483 | 9.214566e-56 | -8.615850e-47 |
| Msa1378040 | Msa1423820 | 0.837205 | 5.963753e-57 | -8.615850e-47 |
| Msa1378040 | Msa1424630 | 0.849782 | 2.591552e-60 | -8.615850e-47 |
| Msa1378040 | Msa1430130 | 0.819211 | 1.308224e-52 | -8.615850e-47 |
| Msa1378040 | Msa1430550 | 0.841438 | 4.751491e-58 | -8.615850e-47 |
| Msa1378040 | Msa1436600 | 0.817264 | 3.609588e-52 | -8.615850e-47 |
| Msa1378040 | Msa1457160 | 0.841101 | 5.827002e-58 | -8.615850e-47 |
| Msa1378040 | Msa1458510 | 0.817283 | 3.573439e-52 | -8.615850e-47 |
| Msa1378040 | Msa1460750 | 0.818255 | 2.156437e-52 | -8.615850e-47 |
| Msa1378040 | Msa1460800 | 0.825657 | 4.159453e-54 | -8.615850e-47 |
| Msa1378040 | Msa1462360 | 0.829032 | 6.458933e-55 | -8.615850e-47 |
| Msa0603370 | Msa1378040 | 0.800475 | 1.416506e-48 | -8.615850e-47 |
| Msa0613340 | Msa1378040 | 0.834295 | 3.256194e-56 | -8.615850e-47 |
| Msa0614920 | Msa1378040 | 0.814086 | 1.842498e-51 | -8.615850e-47 |
| Msa0622170 | Msa1378040 | -0.816227 | 6.166435e-52 | -8.615850e-47 |
| Msa0623070 | Msa1378040 | 0.800204 | 1.607915e-48 | -8.615850e-47 |
| Msa0626850 | Msa1378040 | 0.823720 | 1.189584e-53 | -8.615850e-47 |
| Msa0644400 | Msa1378040 | 0.814020 | 1.905202e-51 | -8.615850e-47 |
| Msa0648860 | Msa1378040 | 0.831649 | 1.481262e-55 | -8.615850e-47 |
| Msa0650300 | Msa1378040 | 0.811946 | 5.428621e-51 | -8.615850e-47 |
| Msa0664970 | Msa1378040 | 0.816690 | 4.856448e-52 | -8.615850e-47 |
| Msa0667740 | Msa1378040 | 0.834944 | 2.236491e-56 | -8.615850e-47 |
| Msa0689780 | Msa1378040 | 0.827923 | 1.196500e-54 | -8.615850e-47 |
| Msa0695870 | Msa1378040 | 0.804778 | 1.834646e-49 | -8.615850e-47 |
| Msa0705990 | Msa1378040 | 0.807518 | 4.861774e-50 | -8.615850e-47 |
| Msa0708310 | Msa1378040 | 0.840011 | 1.123757e-57 | -8.615850e-47 |
| Msa0711150 | Msa1378040 | 0.817867 | 2.638505e-52 | -8.615850e-47 |
| Msa0715410 | Msa1378040 | 0.831025 | 2.108791e-55 | -8.615850e-47 |
| Msa0742150 | Msa1378040 | 0.815151 | 1.070933e-51 | -8.615850e-47 |
| Msa0766630 | Msa1378040 | 0.806439 | 8.220083e-50 | -8.615850e-47 |
| Msa0796690 | Msa1378040 | 0.811488 | 6.827285e-51 | -8.615850e-47 |
| Msa0797770 | Msa1378040 | 0.802491 | 5.471467e-49 | -8.615850e-47 |
| Msa0801780 | Msa1378040 | 0.818351 | 2.050867e-52 | -8.615850e-47 |
| Msa0805910 | Msa1378040 | 0.801276 | 9.720502e-49 | -8.615850e-47 |
| Msa0812950 | Msa1378040 | 0.810406 | 1.171272e-50 | -8.615850e-47 |
| Msa0820850 | Msa1378040 | 0.805527 | 1.278934e-49 | -8.615850e-47 |
| Msa0825870 | Msa1378040 | 0.810815 | 9.556581e-51 | -8.615850e-47 |
| Msa0829830 | Msa1378040 | 0.818737 | 1.676828e-52 | -8.615850e-47 |
| Msa0830230 | Msa1378040 | 0.824139 | 9.487900e-54 | -8.615850e-47 |
| Msa0831850 | Msa1378040 | 0.825992 | 3.463256e-54 | -8.615850e-47 |
| Msa0835230 | Msa1378040 | 0.806189 | 9.281610e-50 | -8.615850e-47 |
| Msa0135410 | Msa1378040 | 0.803801 | 2.930898e-49 | -8.615850e-47 |
| Msa0136630 | Msa1378040 | 0.814536 | 1.465628e-51 | -8.615850e-47 |
| Msa0138020 | Msa1378040 | 0.834646 | 2.656910e-56 | -8.615850e-47 |
| Msa0142280 | Msa1378040 | 0.801271 | 9.740416e-49 | -8.615850e-47 |
| Msa0145260 | Msa1378040 | 0.801273 | 9.732328e-49 | -8.615850e-47 |
| Msa0149300 | Msa1378040 | 0.812265 | 4.625946e-51 | -8.615850e-47 |
| Msa0152560 | Msa1378040 | 0.813019 | 3.163037e-51 | -8.615850e-47 |
| Msa0160960 | Msa1378040 | 0.802340 | 5.877542e-49 | -8.615850e-47 |
| Msa0172080 | Msa1378040 | 0.841505 | 4.562468e-58 | -8.615850e-47 |
| Msa0178510 | Msa1378040 | 0.815315 | 9.846012e-52 | -8.615850e-47 |
| Msa0186320 | Msa1378040 | 0.824618 | 7.321093e-54 | -8.615850e-47 |
| Msa0187830 | Msa1378040 | 0.843324 | 1.502857e-58 | -8.615850e-47 |
| Msa0190530 | Msa1378040 | 0.845922 | 3.001084e-59 | -8.615850e-47 |
| Msa0200850 | Msa1378040 | 0.847015 | 1.510997e-59 | -8.615850e-47 |
| Msa0201530 | Msa1378040 | 0.819716 | 1.003320e-52 | -8.615850e-47 |
| Msa0201570 | Msa1378040 | 0.845828 | 3.183429e-59 | -8.615850e-47 |
| Msa0202580 | Msa1378040 | 0.818089 | 2.351390e-52 | -8.615850e-47 |
| Msa0204840 | Msa1378040 | 0.803950 | 2.729185e-49 | -8.615850e-47 |
| Msa0217480 | Msa1378040 | 0.848599 | 5.532055e-60 | -8.615850e-47 |
| Msa0217700 | Msa1378040 | 0.806242 | 9.047194e-50 | -8.615850e-47 |
| Msa0218370 | Msa1378040 | 0.819040 | 1.430672e-52 | -8.615850e-47 |
| Msa0229590 | Msa1378040 | 0.824285 | 8.766759e-54 | -8.615850e-47 |
| Msa0231060 | Msa1378040 | 0.800941 | 1.137915e-48 | -8.615850e-47 |
| Msa0232720 | Msa1378040 | 0.815142 | 1.075617e-51 | -8.615850e-47 |
| Msa0236420 | Msa1378040 | 0.800602 | 1.334351e-48 | -8.615850e-47 |
| Msa1225100 | Msa1378040 | 0.827269 | 1.717156e-54 | -8.615850e-47 |
| Msa1235390 | Msa1378040 | 0.827806 | 1.276611e-54 | -8.615850e-47 |
| Msa1246700 | Msa1378040 | 0.840390 | 8.950219e-58 | -8.615850e-47 |
| Msa1252260 | Msa1378040 | 0.802454 | 5.567555e-49 | -8.615850e-47 |
| Msa1270660 | Msa1378040 | 0.809076 | 2.262420e-50 | -8.615850e-47 |
| Msa1270730 | Msa1378040 | 0.843790 | 1.127923e-58 | -8.615850e-47 |
| Msa1276340 | Msa1378040 | 0.813961 | 1.963088e-51 | -8.615850e-47 |
| Msa1279480 | Msa1378040 | 0.807006 | 6.241159e-50 | -8.615850e-47 |
| Msa1291830 | Msa1378040 | 0.802654 | 5.063817e-49 | -8.615850e-47 |
| Msa1292990 | Msa1378040 | 0.800804 | 1.213574e-48 | -8.615850e-47 |
| Msa1299620 | Msa1378040 | 0.806154 | 9.440959e-50 | -8.615850e-47 |
| Msa1304890 | Msa1378040 | -0.818926 | 1.518802e-52 | -8.615850e-47 |
| Msa1305350 | Msa1378040 | 0.803669 | 3.121495e-49 | -8.615850e-47 |
| Msa1329870 | Msa1378040 | 0.826322 | 2.890357e-54 | -8.615850e-47 |
| Msa1332050 | Msa1378040 | 0.819379 | 1.197803e-52 | -8.615850e-47 |
| Msa1335230 | Msa1378040 | 0.841975 | 3.428940e-58 | -8.615850e-47 |
| Msa1338400 | Msa1378040 | 0.821911 | 3.139422e-53 | -8.615850e-47 |
| Msa1343250 | Msa1378040 | 0.829502 | 4.966951e-55 | -8.615850e-47 |
| Msa0364790 | Msa1378040 | 0.800534 | 1.378012e-48 | -8.615850e-47 |
| Msa0365780 | Msa1378040 | 0.822823 | 1.927079e-53 | -8.615850e-47 |
| Msa0367870 | Msa1378040 | 0.814145 | 1.788038e-51 | -8.615850e-47 |
| Msa0371950 | Msa1378040 | 0.812990 | 3.209892e-51 | -8.615850e-47 |
| Msa0386010 | Msa1378040 | 0.836481 | 9.124273e-57 | -8.615850e-47 |
| Msa0387660 | Msa1378040 | 0.803510 | 3.367454e-49 | -8.615850e-47 |
| Msa0387690 | Msa1378040 | 0.810859 | 9.348728e-51 | -8.615850e-47 |
| Msa0389270 | Msa1378040 | 0.802946 | 4.408027e-49 | -8.615850e-47 |
| Msa0394470 | Msa1378040 | 0.818952 | 1.498391e-52 | -8.615850e-47 |
| Msa0410580 | Msa1378040 | 0.832775 | 7.799182e-56 | -8.615850e-47 |
| Msa0417330 | Msa1378040 | 0.818990 | 1.468526e-52 | -8.615850e-47 |
| Msa0422180 | Msa1378040 | 0.802102 | 6.577869e-49 | -8.615850e-47 |
| Msa0455760 | Msa1378040 | 0.834079 | 3.686913e-56 | -8.615850e-47 |
| Msa0479340 | Msa1378040 | 0.813579 | 2.383077e-51 | -8.615850e-47 |
| Msa0994910 | Msa1378040 | 0.811053 | 8.485930e-51 | -8.615850e-47 |
| Msa0998740 | Msa1378040 | 0.816621 | 5.030791e-52 | -8.615850e-47 |
| Msa0999290 | Msa1378040 | 0.804244 | 2.370697e-49 | -8.615850e-47 |
| Msa0999680 | Msa1378040 | 0.808041 | 3.764031e-50 | -8.615850e-47 |
| Msa1007230 | Msa1378040 | 0.816842 | 4.488866e-52 | -8.615850e-47 |
| Msa1026940 | Msa1378040 | 0.828645 | 8.014112e-55 | -8.615850e-47 |
| Msa1037780 | Msa1378040 | 0.802471 | 5.523614e-49 | -8.615850e-47 |
| Msa1039710 | Msa1378040 | -0.817300 | 3.541990e-52 | -8.615850e-47 |
| Msa1050680 | Msa1378040 | 0.816162 | 6.375818e-52 | -8.615850e-47 |
| Msa1054990 | Msa1378040 | 0.809831 | 1.557738e-50 | -8.615850e-47 |
| Msa1063400 | Msa1378040 | 0.814070 | 1.857300e-51 | -8.615850e-47 |
| Msa1063420 | Msa1378040 | 0.813629 | 2.323276e-51 | -8.615850e-47 |
| Msa1075650 | Msa1378040 | 0.827708 | 1.347903e-54 | -8.615850e-47 |
| Msa1076960 | Msa1378040 | 0.823169 | 1.600782e-53 | -8.615850e-47 |
| Msa1077340 | Msa1378040 | 0.818888 | 1.549354e-52 | -8.615850e-47 |
| Msa1107190 | Msa1378040 | 0.810771 | 9.767282e-51 | -8.615850e-47 |
| Msa0240270 | Msa1378040 | 0.836811 | 7.519458e-57 | -8.615850e-47 |
| Msa0243480 | Msa1378040 | 0.854503 | 1.178547e-61 | -8.615850e-47 |
| Msa0244140 | Msa1378040 | 0.860674 | 1.751825e-63 | -8.615850e-47 |
| Msa0244190 | Msa1378040 | 0.848209 | 7.093158e-60 | -8.615850e-47 |
| Msa0257320 | Msa1378040 | 0.814541 | 1.461802e-51 | -8.615850e-47 |
| Msa0264830 | Msa1378040 | 0.809590 | 1.755524e-50 | -8.615850e-47 |
| Msa0269560 | Msa1378040 | 0.842282 | 2.844144e-58 | -8.615850e-47 |
| Msa0269810 | Msa1378040 | 0.815223 | 1.031936e-51 | -8.615850e-47 |
| Msa0271550 | Msa1378040 | 0.812985 | 3.218409e-51 | -8.615850e-47 |
| Msa0281930 | Msa1378040 | 0.841454 | 4.707051e-58 | -8.615850e-47 |
| Msa0282720 | Msa1378040 | 0.837451 | 5.157005e-57 | -8.615850e-47 |
| Msa0296620 | Msa1378040 | 0.813531 | 2.442380e-51 | -8.615850e-47 |
| Msa0299660 | Msa1378040 | 0.828070 | 1.102898e-54 | -8.615850e-47 |
| Msa0308460 | Msa1378040 | 0.814222 | 1.719221e-51 | -8.615850e-47 |
| Msa0319290 | Msa1378040 | 0.804871 | 1.753976e-49 | -8.615850e-47 |
| Msa0321080 | Msa1378040 | 0.873638 | 1.258855e-67 | -8.615850e-47 |
| Msa0329680 | Msa1378040 | 0.859601 | 3.695783e-63 | -8.615850e-47 |
| Msa0340340 | Msa1378040 | 0.811133 | 8.153336e-51 | -8.615850e-47 |
| Msa0340710 | Msa1378040 | 0.807790 | 4.255052e-50 | -8.615850e-47 |
| Msa0347750 | Msa1378040 | 0.804681 | 1.922063e-49 | -8.615850e-47 |
| Msa0357760 | Msa1378040 | 0.808391 | 3.168674e-50 | -8.615850e-47 |
| Msa0357790 | Msa1378040 | 0.808643 | 2.800811e-50 | -8.615850e-47 |
| Msa0357830 | Msa1378040 | 0.829114 | 6.168597e-55 | -8.615850e-47 |
| Msa0357840 | Msa1378040 | 0.823924 | 1.065592e-53 | -8.615850e-47 |
| Msa0363790 | Msa1378040 | 0.836486 | 9.096311e-57 | -8.615850e-47 |
| Msa1107260 | Msa1378040 | 0.808358 | 3.220486e-50 | -8.615850e-47 |
| Msa1109090 | Msa1378040 | 0.810183 | 1.308430e-50 | -8.615850e-47 |
| Msa1111870 | Msa1378040 | 0.806550 | 7.791266e-50 | -8.615850e-47 |
| Msa1115280 | Msa1378040 | 0.813074 | 3.077234e-51 | -8.615850e-47 |
| Msa1121490 | Msa1378040 | 0.800889 | 1.165922e-48 | -8.615850e-47 |
| Msa1122860 | Msa1378040 | 0.828806 | 7.325869e-55 | -8.615850e-47 |
| Msa1129550 | Msa1378040 | 0.801983 | 6.960466e-49 | -8.615850e-47 |
| Msa1129730 | Msa1378040 | 0.801837 | 7.457015e-49 | -8.615850e-47 |
| Msa1143020 | Msa1378040 | 0.805491 | 1.301206e-49 | -8.615850e-47 |
| Msa1147740 | Msa1378040 | 0.804574 | 2.024063e-49 | -8.615850e-47 |
| Msa1157080 | Msa1378040 | 0.841541 | 4.464677e-58 | -8.615850e-47 |
| Msa1162780 | Msa1378040 | 0.809991 | 1.438910e-50 | -8.615850e-47 |
| Msa1173490 | Msa1378040 | 0.821799 | 3.332504e-53 | -8.615850e-47 |
| Msa1177560 | Msa1378040 | 0.816471 | 5.436475e-52 | -8.615850e-47 |
| Msa1198770 | Msa1378040 | 0.830148 | 3.457899e-55 | -8.615850e-47 |
| Msa1200250 | Msa1378040 | 0.809901 | 1.504484e-50 | -8.615850e-47 |
| Msa1201200 | Msa1378040 | 0.804103 | 2.536090e-49 | -8.615850e-47 |
| Msa1207310 | Msa1378040 | 0.814005 | 1.920503e-51 | -8.615850e-47 |
| Msa1210110 | Msa1378040 | 0.818848 | 1.582061e-52 | -8.615850e-47 |
| Msa1212050 | Msa1378040 | 0.801942 | 7.096897e-49 | -8.615850e-47 |
| Msa1218580 | Msa1378040 | 0.817440 | 3.293800e-52 | -8.615850e-47 |
| Msa0485490 | Msa1378040 | 0.819536 | 1.102885e-52 | -8.615850e-47 |
| Msa0486690 | Msa1378040 | 0.824572 | 7.505393e-54 | -8.615850e-47 |
| Msa0518380 | Msa1378040 | 0.805294 | 1.430895e-49 | -8.615850e-47 |
| Msa0524440 | Msa1378040 | 0.835730 | 1.415186e-56 | -8.615850e-47 |
| Msa0526070 | Msa1378040 | -0.824832 | 6.518301e-54 | -8.615850e-47 |
| Msa0535630 | Msa1378040 | 0.805163 | 1.524011e-49 | -8.615850e-47 |
| Msa0558370 | Msa1378040 | 0.813845 | 2.082578e-51 | -8.615850e-47 |
| Msa0559760 | Msa1378040 | 0.803815 | 2.911196e-49 | -8.615850e-47 |
| Msa0572680 | Msa1378040 | 0.882532 | 9.626871e-71 | -8.615850e-47 |
| Msa0573890 | Msa1378040 | 0.806536 | 7.843959e-50 | -8.615850e-47 |
| Msa0574600 | Msa1378040 | 0.833938 | 4.000548e-56 | -8.615850e-47 |
| Msa0587030 | Msa1378040 | 0.830129 | 3.494260e-55 | -8.615850e-47 |
| Msa0594560 | Msa1378040 | 0.800843 | 1.191828e-48 | -8.615850e-47 |
| Msa0842650 | Msa1378040 | 0.813407 | 2.599801e-51 | -8.615850e-47 |
| Msa0843360 | Msa1378040 | 0.802898 | 4.509857e-49 | -8.615850e-47 |
| Msa0844110 | Msa1378040 | 0.803601 | 3.224943e-49 | -8.615850e-47 |
| Msa0861130 | Msa1378040 | 0.804471 | 2.126639e-49 | -8.615850e-47 |
| Msa0870060 | Msa1378040 | 0.822211 | 2.673892e-53 | -8.615850e-47 |
| Msa0880810 | Msa1378040 | 0.815794 | 7.700131e-52 | -8.615850e-47 |
| Msa0888260 | Msa1378040 | 0.829081 | 6.285088e-55 | -8.615850e-47 |
| Msa0894710 | Msa1378040 | 0.832775 | 7.799188e-56 | -8.615850e-47 |
| Msa0898320 | Msa1378040 | 0.828820 | 7.266853e-55 | -8.615850e-47 |
| Msa0899970 | Msa1378040 | 0.803409 | 3.534523e-49 | -8.615850e-47 |
| Msa0901400 | Msa1378040 | 0.806143 | 9.492626e-50 | -8.615850e-47 |
| Msa0902830 | Msa1378040 | 0.829616 | 4.659919e-55 | -8.615850e-47 |
| Msa0915610 | Msa1378040 | 0.822071 | 2.882501e-53 | -8.615850e-47 |
| Msa0921420 | Msa1378040 | 0.810195 | 1.300460e-50 | -8.615850e-47 |
| Msa0927310 | Msa1378040 | 0.810100 | 1.363233e-50 | -8.615850e-47 |
| Msa0927380 | Msa1378040 | 0.811311 | 7.459835e-51 | -8.615850e-47 |
| Msa0932100 | Msa1378040 | 0.809084 | 2.253072e-50 | -8.615850e-47 |
| Msa0935770 | Msa1378040 | 0.843967 | 1.011440e-58 | -8.615850e-47 |
| Msa0936390 | Msa1378040 | 0.803030 | 4.234015e-49 | -8.615850e-47 |
| Msa0939110 | Msa1378040 | 0.812213 | 4.747194e-51 | -8.615850e-47 |
| Msa0952040 | Msa1378040 | 0.804783 | 1.829838e-49 | -8.615850e-47 |
| Msa0960390 | Msa1378040 | 0.812787 | 3.556459e-51 | -8.615850e-47 |
| Msa0965080 | Msa1378040 | 0.812749 | 3.625681e-51 | -8.615850e-47 |
| Msa0965290 | Msa1378040 | 0.811386 | 7.184235e-51 | -8.615850e-47 |
| Msa0970230 | Msa1378040 | 0.807743 | 4.354927e-50 | -8.615850e-47 |
| Msa0972810 | Msa1378040 | 0.820701 | 5.969225e-53 | -8.615850e-47 |
| Msa0973600 | Msa1378040 | 0.830684 | 2.556963e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378040 | MtrunA17_Chr8g0388181 | 96.032 | 126 | 5 | 0 | 1 | 126 | 1 | 126 | 2.16e-83 | 239 |
| Msa1378040 | MtrunA17_Chr8g0388191 | 75.397 | 126 | 28 | 3 | 1 | 125 | 5 | 128 | 1.13e-59 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 18 sgRNAs with CRISPR-Local
Find 46 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCATGCAGTTTGCTTT+TGG | 0.234778 | tig0020047:+69233 | None:intergenic |
| GGACTCAGAACCAACCATTT+TGG | 0.266732 | tig0020047:-69188 | Msa1378040:CDS |
| CGTGAGTTACTTTCTATTCA+AGG | 0.359033 | tig0020047:-69001 | Msa1378040:CDS |
| TAGTAATGATTTAGTAGAAA+AGG | 0.375647 | tig0020047:-69119 | Msa1378040:CDS |
| AAAGAAAAGGGTCCGGTTTG+TGG | 0.426219 | tig0020047:-69209 | Msa1378040:CDS |
| CTGCATGCAAGACAAAGAAA+AGG | 0.503875 | tig0020047:-69222 | Msa1378040:CDS |
| TAATGATTTAGTAGAAAAGG+AGG | 0.512981 | tig0020047:-69116 | Msa1378040:CDS |
| GTGAGTTACTTTCTATTCAA+GGG | 0.520035 | tig0020047:-69000 | Msa1378040:CDS |
| TGGAAGTGTTCTTGAATTGA+AGG | 0.537857 | tig0020047:-69032 | Msa1378040:CDS |
| AATGATTTAGTAGAAAAGGA+GGG | 0.545782 | tig0020047:-69115 | Msa1378040:CDS |
| TGCATGCAAGACAAAGAAAA+GGG | 0.550595 | tig0020047:-69221 | Msa1378040:CDS |
| TTGGTTCTGAGTCCACAAAC+CGG | 0.560281 | tig0020047:+69197 | None:intergenic |
| GCAAGACAAAGAAAAGGGTC+CGG | 0.569438 | tig0020047:-69216 | Msa1378040:CDS |
| TTTGTACAAATGCTCCCTCA+CGG | 0.598040 | tig0020047:+68975 | None:intergenic |
| TCTATTCAAGGGAACCGTGA+GGG | 0.615406 | tig0020047:-68989 | Msa1378040:CDS |
| GAGTTGCTATCAAGATGCAA+TGG | 0.620407 | tig0020047:-69052 | Msa1378040:CDS |
| AGTGACGATTAGATTAACAA+AGG | 0.646753 | tig0020047:-69086 | Msa1378040:CDS |
| TTCTATTCAAGGGAACCGTG+AGG | 0.687443 | tig0020047:-68990 | Msa1378040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGTGATATTTTTTTA+AGG | + | tig0020047:68975-68994 | None:intergenic | 10.0% |
| !!! | TTTTTTGTGATATTTTTTTA+AGG | + | tig0020047:68975-68994 | None:intergenic | 10.0% |
| !! | TAGTAATGATTTAGTAGAAA+AGG | - | tig0020047:69161-69180 | Msa1378040:CDS | 20.0% |
| !! | TAGTAATGATTTAGTAGAAA+AGG | - | tig0020047:69161-69180 | Msa1378040:CDS | 20.0% |
| ! | TAATGATTTAGTAGAAAAGG+AGG | - | tig0020047:69164-69183 | Msa1378040:CDS | 25.0% |
| ! | AATGATTTAGTAGAAAAGGA+GGG | - | tig0020047:69165-69184 | Msa1378040:CDS | 25.0% |
| ! | TAATGATTTAGTAGAAAAGG+AGG | - | tig0020047:69164-69183 | Msa1378040:CDS | 25.0% |
| ! | AATGATTTAGTAGAAAAGGA+GGG | - | tig0020047:69165-69184 | Msa1378040:CDS | 25.0% |
| AGTGACGATTAGATTAACAA+AGG | - | tig0020047:69194-69213 | Msa1378040:CDS | 30.0% | |
| ! | GTGAGTTACTTTCTATTCAA+GGG | - | tig0020047:69280-69299 | Msa1378040:CDS | 30.0% |
| AGTGACGATTAGATTAACAA+AGG | - | tig0020047:69194-69213 | Msa1378040:CDS | 30.0% | |
| ! | GTGAGTTACTTTCTATTCAA+GGG | - | tig0020047:69280-69299 | Msa1378040:CDS | 30.0% |
| TGCATGCAAGACAAAGAAAA+GGG | - | tig0020047:69059-69078 | Msa1378040:CDS | 35.0% | |
| ! | TTTTCTTCTCCCAAAATGGT+TGG | + | tig0020047:69105-69124 | None:intergenic | 35.0% |
| !! | GTTGTTTTCTTCTCCCAAAA+TGG | + | tig0020047:69109-69128 | None:intergenic | 35.0% |
| !! | TGGAAGTGTTCTTGAATTGA+AGG | - | tig0020047:69248-69267 | Msa1378040:CDS | 35.0% |
| ! | CGTGAGTTACTTTCTATTCA+AGG | - | tig0020047:69279-69298 | Msa1378040:CDS | 35.0% |
| TGCATGCAAGACAAAGAAAA+GGG | - | tig0020047:69059-69078 | Msa1378040:CDS | 35.0% | |
| ! | TTTTCTTCTCCCAAAATGGT+TGG | + | tig0020047:69105-69124 | None:intergenic | 35.0% |
| !! | GTTGTTTTCTTCTCCCAAAA+TGG | + | tig0020047:69109-69128 | None:intergenic | 35.0% |
| !! | TGGAAGTGTTCTTGAATTGA+AGG | - | tig0020047:69248-69267 | Msa1378040:CDS | 35.0% |
| ! | CGTGAGTTACTTTCTATTCA+AGG | - | tig0020047:69279-69298 | Msa1378040:CDS | 35.0% |
| !! | CTTGCATGCAGTTTGCTTTT+GGG | + | tig0020047:69049-69068 | None:intergenic | 40.0% |
| !! | TCTTGCATGCAGTTTGCTTT+TGG | + | tig0020047:69050-69069 | None:intergenic | 40.0% |
| CTGCATGCAAGACAAAGAAA+AGG | - | tig0020047:69058-69077 | Msa1378040:CDS | 40.0% | |
| ! | GACTCAGAACCAACCATTTT+GGG | - | tig0020047:69093-69112 | Msa1378040:CDS | 40.0% |
| GAGTTGCTATCAAGATGCAA+TGG | - | tig0020047:69228-69247 | Msa1378040:CDS | 40.0% | |
| TTTGTACAAATGCTCCCTCA+CGG | + | tig0020047:69308-69327 | None:intergenic | 40.0% | |
| !! | CTTGCATGCAGTTTGCTTTT+GGG | + | tig0020047:69049-69068 | None:intergenic | 40.0% |
| !! | TCTTGCATGCAGTTTGCTTT+TGG | + | tig0020047:69050-69069 | None:intergenic | 40.0% |
| CTGCATGCAAGACAAAGAAA+AGG | - | tig0020047:69058-69077 | Msa1378040:CDS | 40.0% | |
| ! | GACTCAGAACCAACCATTTT+GGG | - | tig0020047:69093-69112 | Msa1378040:CDS | 40.0% |
| GAGTTGCTATCAAGATGCAA+TGG | - | tig0020047:69228-69247 | Msa1378040:CDS | 40.0% | |
| TTTGTACAAATGCTCCCTCA+CGG | + | tig0020047:69308-69327 | None:intergenic | 40.0% | |
| GCAAGACAAAGAAAAGGGTC+CGG | - | tig0020047:69064-69083 | Msa1378040:CDS | 45.0% | |
| ! | AAAGAAAAGGGTCCGGTTTG+TGG | - | tig0020047:69071-69090 | Msa1378040:CDS | 45.0% |
| !! | TTGGTTCTGAGTCCACAAAC+CGG | + | tig0020047:69086-69105 | None:intergenic | 45.0% |
| ! | GGACTCAGAACCAACCATTT+TGG | - | tig0020047:69092-69111 | Msa1378040:CDS | 45.0% |
| TTCTATTCAAGGGAACCGTG+AGG | - | tig0020047:69290-69309 | Msa1378040:CDS | 45.0% | |
| TCTATTCAAGGGAACCGTGA+GGG | - | tig0020047:69291-69310 | Msa1378040:CDS | 45.0% | |
| GCAAGACAAAGAAAAGGGTC+CGG | - | tig0020047:69064-69083 | Msa1378040:CDS | 45.0% | |
| ! | AAAGAAAAGGGTCCGGTTTG+TGG | - | tig0020047:69071-69090 | Msa1378040:CDS | 45.0% |
| !! | TTGGTTCTGAGTCCACAAAC+CGG | + | tig0020047:69086-69105 | None:intergenic | 45.0% |
| ! | GGACTCAGAACCAACCATTT+TGG | - | tig0020047:69092-69111 | Msa1378040:CDS | 45.0% |
| TTCTATTCAAGGGAACCGTG+AGG | - | tig0020047:69290-69309 | Msa1378040:CDS | 45.0% | |
| TCTATTCAAGGGAACCGTGA+GGG | - | tig0020047:69291-69310 | Msa1378040:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020047 | gene | 68961 | 69341 | 68961 | ID=Msa1378040;Name=Msa1378040 |
| tig0020047 | mRNA | 68961 | 69341 | 68961 | ID=Msa1378040-mRNA-1;Parent=Msa1378040;Name=Msa1378040-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|126 |
| tig0020047 | exon | 68961 | 69341 | 68961 | ID=Msa1378040-mRNA-1:exon:5956;Parent=Msa1378040-mRNA-1 |
| tig0020047 | CDS | 68961 | 69341 | 68961 | ID=Msa1378040-mRNA-1:cds;Parent=Msa1378040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
