Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085740 | XP_003596948.2 | 95.539 | 269 | 11 | 1 | 1 | 268 | 1 | 269 | 2.53e-172 | 504 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085740 | sp|Q8RX83|CSLB3_ARATH | 55.882 | 272 | 107 | 3 | 8 | 269 | 10 | 278 | 1.73e-96 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085740 | G7ITV5 | 95.539 | 269 | 11 | 1 | 1 | 268 | 1 | 269 | 1.21e-172 | 504 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa1085740 | 0.813830 | 2.098189e-51 | -8.615850e-47 |
| Msa0002240 | Msa1085740 | 0.802878 | 4.550842e-49 | -8.615850e-47 |
| Msa0002670 | Msa1085740 | 0.806826 | 6.812171e-50 | -8.615850e-47 |
| Msa0002720 | Msa1085740 | 0.805987 | 1.023892e-49 | -8.615850e-47 |
| Msa0017510 | Msa1085740 | 0.818028 | 2.427640e-52 | -8.615850e-47 |
| Msa0018650 | Msa1085740 | 0.807460 | 4.999384e-50 | -8.615850e-47 |
| Msa0028700 | Msa1085740 | 0.845298 | 4.431453e-59 | -8.615850e-47 |
| Msa0032330 | Msa1085740 | 0.842457 | 2.555955e-58 | -8.615850e-47 |
| Msa0062860 | Msa1085740 | 0.847700 | 9.798894e-60 | -8.615850e-47 |
| Msa0101710 | Msa1085740 | 0.805969 | 1.032648e-49 | -8.615850e-47 |
| Msa0105070 | Msa1085740 | 0.832076 | 1.161770e-55 | -8.615850e-47 |
| Msa0107580 | Msa1085740 | 0.810393 | 1.178914e-50 | -8.615850e-47 |
| Msa0114060 | Msa1085740 | 0.812648 | 3.814833e-51 | -8.615850e-47 |
| Msa0115270 | Msa1085740 | 0.820640 | 6.165395e-53 | -8.615850e-47 |
| Msa0608160 | Msa1085740 | 0.803245 | 3.822124e-49 | -8.615850e-47 |
| Msa0610800 | Msa1085740 | 0.806146 | 9.476625e-50 | -8.615850e-47 |
| Msa0613440 | Msa1085740 | 0.800179 | 1.627502e-48 | -8.615850e-47 |
| Msa0615740 | Msa1085740 | 0.815779 | 7.760156e-52 | -8.615850e-47 |
| Msa0623080 | Msa1085740 | 0.804219 | 2.399384e-49 | -8.615850e-47 |
| Msa0632740 | Msa1085740 | 0.817773 | 2.770834e-52 | -8.615850e-47 |
| Msa0641670 | Msa1085740 | 0.801728 | 7.853541e-49 | -8.615850e-47 |
| Msa0648080 | Msa1085740 | 0.805736 | 1.155836e-49 | -8.615850e-47 |
| Msa0661650 | Msa1085740 | 0.810550 | 1.090301e-50 | -8.615850e-47 |
| Msa0663240 | Msa1085740 | 0.808070 | 3.710146e-50 | -8.615850e-47 |
| Msa0672690 | Msa1085740 | 0.804010 | 2.651834e-49 | -8.615850e-47 |
| Msa0673450 | Msa1085740 | 0.804563 | 2.034653e-49 | -8.615850e-47 |
| Msa0673460 | Msa1085740 | 0.801571 | 8.454660e-49 | -8.615850e-47 |
| Msa0688480 | Msa1085740 | 0.810643 | 1.040799e-50 | -8.615850e-47 |
| Msa0701010 | Msa1085740 | 0.820953 | 5.222332e-53 | -8.615850e-47 |
| Msa0731550 | Msa1085740 | 0.802148 | 6.437239e-49 | -8.615850e-47 |
| Msa0731940 | Msa1085740 | 0.801249 | 9.843378e-49 | -8.615850e-47 |
| Msa0735170 | Msa1085740 | 0.807790 | 4.255012e-50 | -8.615850e-47 |
| Msa0738500 | Msa1085740 | 0.837849 | 4.077105e-57 | -8.615850e-47 |
| Msa0743720 | Msa1085740 | 0.842083 | 3.211388e-58 | -8.615850e-47 |
| Msa0748970 | Msa1085740 | 0.801110 | 1.050931e-48 | -8.615850e-47 |
| Msa0768290 | Msa1085740 | 0.827684 | 1.365477e-54 | -8.615850e-47 |
| Msa0768370 | Msa1085740 | 0.853296 | 2.624813e-61 | -8.615850e-47 |
| Msa0773840 | Msa1085740 | 0.806330 | 8.669813e-50 | -8.615850e-47 |
| Msa0777230 | Msa1085740 | 0.807457 | 5.007809e-50 | -8.615850e-47 |
| Msa0784290 | Msa1085740 | 0.801760 | 7.735787e-49 | -8.615850e-47 |
| Msa0801780 | Msa1085740 | 0.800468 | 1.421046e-48 | -8.615850e-47 |
| Msa0810220 | Msa1085740 | 0.802032 | 6.799109e-49 | -8.615850e-47 |
| Msa0820850 | Msa1085740 | 0.814637 | 1.392079e-51 | -8.615850e-47 |
| Msa0824590 | Msa1085740 | 0.801541 | 8.577729e-49 | -8.615850e-47 |
| Msa0828940 | Msa1085740 | 0.834918 | 2.269980e-56 | -8.615850e-47 |
| Msa0150270 | Msa1085740 | 0.814212 | 1.728378e-51 | -8.615850e-47 |
| Msa0157290 | Msa1085740 | 0.819017 | 1.448223e-52 | -8.615850e-47 |
| Msa0165210 | Msa1085740 | 0.807103 | 5.952847e-50 | -8.615850e-47 |
| Msa0165220 | Msa1085740 | 0.806627 | 7.502674e-50 | -8.615850e-47 |
| Msa0178960 | Msa1085740 | 0.866688 | 2.374833e-65 | -8.615850e-47 |
| Msa0178970 | Msa1085740 | 0.838992 | 2.067561e-57 | -8.615850e-47 |
| Msa0180500 | Msa1085740 | 0.838088 | 3.538825e-57 | -8.615850e-47 |
| Msa0213350 | Msa1085740 | 0.801594 | 8.362959e-49 | -8.615850e-47 |
| Msa0215320 | Msa1085740 | -0.823536 | 1.314234e-53 | -8.615850e-47 |
| Msa0220740 | Msa1085740 | 0.813258 | 2.803037e-51 | -8.615850e-47 |
| Msa0223010 | Msa1085740 | 0.811197 | 7.898220e-51 | -8.615850e-47 |
| Msa0223260 | Msa1085740 | 0.811208 | 7.854183e-51 | -8.615850e-47 |
| Msa0223410 | Msa1085740 | -0.806439 | 8.221082e-50 | -8.615850e-47 |
| Msa0226890 | Msa1085740 | 0.805221 | 1.482508e-49 | -8.615850e-47 |
| Msa0233300 | Msa1085740 | 0.811301 | 7.497054e-51 | -8.615850e-47 |
| Msa0384890 | Msa1085740 | 0.817411 | 3.343598e-52 | -8.615850e-47 |
| Msa0397750 | Msa1085740 | 0.801420 | 9.078759e-49 | -8.615850e-47 |
| Msa0402290 | Msa1085740 | 0.806651 | 7.416561e-50 | -8.615850e-47 |
| Msa0406880 | Msa1085740 | 0.810941 | 8.973028e-51 | -8.615850e-47 |
| Msa0416650 | Msa1085740 | 0.819666 | 1.030538e-52 | -8.615850e-47 |
| Msa0424320 | Msa1085740 | 0.819712 | 1.005685e-52 | -8.615850e-47 |
| Msa0425790 | Msa1085740 | 0.817423 | 3.323268e-52 | -8.615850e-47 |
| Msa0431690 | Msa1085740 | 0.819103 | 1.384609e-52 | -8.615850e-47 |
| Msa0435230 | Msa1085740 | 0.806784 | 6.951299e-50 | -8.615850e-47 |
| Msa0440750 | Msa1085740 | 0.800234 | 1.585564e-48 | -8.615850e-47 |
| Msa0466390 | Msa1085740 | 0.824864 | 6.405956e-54 | -8.615850e-47 |
| Msa0479340 | Msa1085740 | 0.826865 | 2.144968e-54 | -8.615850e-47 |
| Msa0980090 | Msa1085740 | 0.867351 | 1.458892e-65 | -8.615850e-47 |
| Msa0986360 | Msa1085740 | 0.810468 | 1.135319e-50 | -8.615850e-47 |
| Msa0989620 | Msa1085740 | 0.800264 | 1.564067e-48 | -8.615850e-47 |
| Msa0991930 | Msa1085740 | 0.800478 | 1.414735e-48 | -8.615850e-47 |
| Msa0998690 | Msa1085740 | 0.830847 | 2.332459e-55 | -8.615850e-47 |
| Msa1000900 | Msa1085740 | 0.805920 | 1.057277e-49 | -8.615850e-47 |
| Msa1003620 | Msa1085740 | 0.824851 | 6.450802e-54 | -8.615850e-47 |
| Msa1014540 | Msa1085740 | 0.836860 | 7.305451e-57 | -8.615850e-47 |
| Msa1014990 | Msa1085740 | 0.809278 | 2.048140e-50 | -8.615850e-47 |
| Msa1030970 | Msa1085740 | 0.811525 | 6.702389e-51 | -8.615850e-47 |
| Msa1046460 | Msa1085740 | 0.810369 | 1.192651e-50 | -8.615850e-47 |
| Msa1052330 | Msa1085740 | 0.802824 | 4.669920e-49 | -8.615850e-47 |
| Msa1075220 | Msa1085740 | -0.830827 | 2.358905e-55 | -8.615850e-47 |
| Msa1075650 | Msa1085740 | 0.804972 | 1.671196e-49 | -8.615850e-47 |
| Msa1082580 | Msa1085740 | 0.811573 | 6.543224e-51 | -8.615850e-47 |
| Msa1085740 | Msa1090260 | 0.807712 | 4.421789e-50 | -8.615850e-47 |
| Msa1085740 | Msa1113170 | 0.808219 | 3.448673e-50 | -8.615850e-47 |
| Msa1085740 | Msa1115230 | 0.801719 | 7.884606e-49 | -8.615850e-47 |
| Msa1085740 | Msa1116130 | -0.813135 | 2.982786e-51 | -8.615850e-47 |
| Msa1085740 | Msa1120610 | 0.804049 | 2.603167e-49 | -8.615850e-47 |
| Msa1085740 | Msa1121490 | 0.820400 | 6.999797e-53 | -8.615850e-47 |
| Msa1085740 | Msa1136090 | 0.805503 | 1.293917e-49 | -8.615850e-47 |
| Msa1085740 | Msa1137570 | 0.837650 | 4.587701e-57 | -8.615850e-47 |
| Msa1085740 | Msa1139000 | -0.804869 | 1.756164e-49 | -8.615850e-47 |
| Msa1085740 | Msa1156020 | 0.857716 | 1.350547e-62 | -8.615850e-47 |
| Msa1085740 | Msa1162550 | -0.827212 | 1.772248e-54 | -8.615850e-47 |
| Msa1085740 | Msa1174040 | 0.811845 | 5.709240e-51 | -8.615850e-47 |
| Msa1085740 | Msa1174910 | 0.802893 | 4.518557e-49 | -8.615850e-47 |
| Msa1085740 | Msa1182090 | 0.807126 | 5.885458e-50 | -8.615850e-47 |
| Msa1085740 | Msa1184420 | 0.808025 | 3.793311e-50 | -8.615850e-47 |
| Msa1085740 | Msa1186950 | -0.812982 | 3.223795e-51 | -8.615850e-47 |
| Msa1085740 | Msa1226660 | 0.806957 | 6.390225e-50 | -8.615850e-47 |
| Msa1085740 | Msa1230430 | 0.808906 | 2.459742e-50 | -8.615850e-47 |
| Msa1085740 | Msa1233890 | 0.810187 | 1.305714e-50 | -8.615850e-47 |
| Msa1085740 | Msa1236430 | 0.802932 | 4.436709e-49 | -8.615850e-47 |
| Msa1085740 | Msa1238930 | 0.806277 | 8.893227e-50 | -8.615850e-47 |
| Msa1085740 | Msa1244250 | 0.843482 | 1.363397e-58 | -8.615850e-47 |
| Msa1085740 | Msa1249490 | 0.861419 | 1.039400e-63 | -8.615850e-47 |
| Msa1085740 | Msa1253020 | 0.807221 | 5.618852e-50 | -8.615850e-47 |
| Msa1085740 | Msa1276890 | 0.821625 | 3.655186e-53 | -8.615850e-47 |
| Msa1085740 | Msa1277660 | 0.824106 | 9.659782e-54 | -8.615850e-47 |
| Msa1085740 | Msa1282580 | -0.803950 | 2.729689e-49 | -8.615850e-47 |
| Msa1085740 | Msa1284680 | 0.849907 | 2.391886e-60 | -8.615850e-47 |
| Msa1085740 | Msa1289430 | 0.812457 | 4.198258e-51 | -8.615850e-47 |
| Msa1085740 | Msa1306760 | 0.806606 | 7.580609e-50 | -8.615850e-47 |
| Msa1085740 | Msa1306850 | 0.812020 | 5.230512e-51 | -8.615850e-47 |
| Msa1085740 | Msa1310700 | 0.800802 | 1.214649e-48 | -8.615850e-47 |
| Msa1085740 | Msa1319800 | 0.809850 | 1.543087e-50 | -8.615850e-47 |
| Msa1085740 | Msa1327680 | 0.800974 | 1.120602e-48 | -8.615850e-47 |
| Msa1085740 | Msa1336670 | 0.807478 | 4.957983e-50 | -8.615850e-47 |
| Msa1085740 | Msa1342840 | 0.804501 | 2.095910e-49 | -8.615850e-47 |
| Msa1085740 | Msa1348950 | 0.802554 | 5.308941e-49 | -8.615850e-47 |
| Msa1085740 | Msa1351620 | 0.820813 | 5.626435e-53 | -8.615850e-47 |
| Msa1085740 | Msa1359040 | 0.802166 | 6.383595e-49 | -8.615850e-47 |
| Msa1085740 | Msa1362880 | 0.828961 | 6.718590e-55 | -8.615850e-47 |
| Msa1085740 | Msa1366810 | 0.803756 | 2.995150e-49 | -8.615850e-47 |
| Msa1085740 | Msa1369430 | 0.815886 | 7.345925e-52 | -8.615850e-47 |
| Msa1085740 | Msa1369530 | 0.802697 | 4.961686e-49 | -8.615850e-47 |
| Msa1085740 | Msa1372760 | 0.810015 | 1.421783e-50 | -8.615850e-47 |
| Msa1085740 | Msa1397860 | 0.800842 | 1.192060e-48 | -8.615850e-47 |
| Msa1085740 | Msa1402790 | 0.813720 | 2.218911e-51 | -8.615850e-47 |
| Msa1085740 | Msa1404020 | 0.800627 | 1.318757e-48 | -8.615850e-47 |
| Msa1085740 | Msa1411020 | 0.808562 | 2.914244e-50 | -8.615850e-47 |
| Msa1085740 | Msa1416150 | 0.807764 | 4.309338e-50 | -8.615850e-47 |
| Msa1085740 | Msa1424290 | 0.804703 | 1.902328e-49 | -8.615850e-47 |
| Msa1085740 | Msa1427230 | 0.822880 | 1.869684e-53 | -8.615850e-47 |
| Msa1085740 | Msa1430680 | 0.804113 | 2.523901e-49 | -8.615850e-47 |
| Msa1085740 | Msa1434350 | 0.806055 | 9.907372e-50 | -8.615850e-47 |
| Msa1085740 | Msa1439320 | 0.810227 | 1.280089e-50 | -8.615850e-47 |
| Msa1085740 | Msa1451620 | -0.827698 | 1.354798e-54 | -8.615850e-47 |
| Msa1085740 | Msa1455490 | 0.818216 | 2.200689e-52 | -8.615850e-47 |
| Msa1085740 | Msa1460830 | 0.822034 | 2.939419e-53 | -8.615850e-47 |
| Msa0251320 | Msa1085740 | 0.809929 | 1.483605e-50 | -8.615850e-47 |
| Msa0278110 | Msa1085740 | 0.835750 | 1.399050e-56 | -8.615850e-47 |
| Msa0279700 | Msa1085740 | 0.803083 | 4.127876e-49 | -8.615850e-47 |
| Msa0279790 | Msa1085740 | 0.804630 | 1.969908e-49 | -8.615850e-47 |
| Msa0317290 | Msa1085740 | 0.819745 | 9.884790e-53 | -8.615850e-47 |
| Msa0319170 | Msa1085740 | 0.815916 | 7.233213e-52 | -8.615850e-47 |
| Msa0337900 | Msa1085740 | 0.813611 | 2.344533e-51 | -8.615850e-47 |
| Msa0339620 | Msa1085740 | 0.817141 | 3.845686e-52 | -8.615850e-47 |
| Msa0340450 | Msa1085740 | 0.820694 | 5.991365e-53 | -8.615850e-47 |
| Msa0342750 | Msa1085740 | 0.803181 | 3.940191e-49 | -8.615850e-47 |
| Msa0344830 | Msa1085740 | 0.811692 | 6.166601e-51 | -8.615850e-47 |
| Msa0344910 | Msa1085740 | 0.802742 | 4.854889e-49 | -8.615850e-47 |
| Msa0344980 | Msa1085740 | 0.801769 | 7.699725e-49 | -8.615850e-47 |
| Msa0349360 | Msa1085740 | 0.807298 | 5.412157e-50 | -8.615850e-47 |
| Msa0350990 | Msa1085740 | 0.822919 | 1.830444e-53 | -8.615850e-47 |
| Msa0351030 | Msa1085740 | 0.822903 | 1.846487e-53 | -8.615850e-47 |
| Msa0351100 | Msa1085740 | 0.817803 | 2.727921e-52 | -8.615850e-47 |
| Msa0355220 | Msa1085740 | 0.801779 | 7.663254e-49 | -8.615850e-47 |
| Msa0495330 | Msa1085740 | 0.800269 | 1.560343e-48 | -8.615850e-47 |
| Msa0512750 | Msa1085740 | 0.820482 | 6.702713e-53 | -8.615850e-47 |
| Msa0516750 | Msa1085740 | 0.839267 | 1.754817e-57 | -8.615850e-47 |
| Msa0517110 | Msa1085740 | 0.805733 | 1.157660e-49 | -8.615850e-47 |
| Msa0523940 | Msa1085740 | 0.836217 | 1.064820e-56 | -8.615850e-47 |
| Msa0529040 | Msa1085740 | 0.807365 | 5.237357e-50 | -8.615850e-47 |
| Msa0545700 | Msa1085740 | 0.825945 | 3.554531e-54 | -8.615850e-47 |
| Msa0562440 | Msa1085740 | 0.823813 | 1.131943e-53 | -8.615850e-47 |
| Msa0585230 | Msa1085740 | 0.824091 | 9.741044e-54 | -8.615850e-47 |
| Msa0598780 | Msa1085740 | 0.821026 | 5.024695e-53 | -8.615850e-47 |
| Msa0842650 | Msa1085740 | 0.839441 | 1.581400e-57 | -8.615850e-47 |
| Msa0844450 | Msa1085740 | 0.804714 | 1.891816e-49 | -8.615850e-47 |
| Msa0844490 | Msa1085740 | 0.823617 | 1.257796e-53 | -8.615850e-47 |
| Msa0844500 | Msa1085740 | 0.805729 | 1.159654e-49 | -8.615850e-47 |
| Msa0849030 | Msa1085740 | 0.831685 | 1.451055e-55 | -8.615850e-47 |
| Msa0861130 | Msa1085740 | 0.813869 | 2.057505e-51 | -8.615850e-47 |
| Msa0868700 | Msa1085740 | 0.801902 | 7.232046e-49 | -8.615850e-47 |
| Msa0877250 | Msa1085740 | 0.844901 | 5.671551e-59 | -8.615850e-47 |
| Msa0880140 | Msa1085740 | 0.813033 | 3.140822e-51 | -8.615850e-47 |
| Msa0882690 | Msa1085740 | 0.803347 | 3.640667e-49 | -8.615850e-47 |
| Msa0885280 | Msa1085740 | 0.838303 | 3.115084e-57 | -8.615850e-47 |
| Msa0897330 | Msa1085740 | 0.814109 | 1.821650e-51 | -8.615850e-47 |
| Msa0897880 | Msa1085740 | 0.803930 | 2.755754e-49 | -8.615850e-47 |
| Msa0899430 | Msa1085740 | 0.815280 | 1.002586e-51 | -8.615850e-47 |
| Msa0899450 | Msa1085740 | 0.801243 | 9.872974e-49 | -8.615850e-47 |
| Msa0907070 | Msa1085740 | 0.813175 | 2.923611e-51 | -8.615850e-47 |
| Msa0907260 | Msa1085740 | 0.817235 | 3.662499e-52 | -8.615850e-47 |
| Msa0914760 | Msa1085740 | 0.808267 | 3.369179e-50 | -8.615850e-47 |
| Msa0917880 | Msa1085740 | 0.833937 | 4.001622e-56 | -8.615850e-47 |
| Msa0924050 | Msa1085740 | 0.805175 | 1.515445e-49 | -8.615850e-47 |
| Msa0925250 | Msa1085740 | 0.816430 | 5.553081e-52 | -8.615850e-47 |
| Msa0925290 | Msa1085740 | 0.813718 | 2.221206e-51 | -8.615850e-47 |
| Msa0927380 | Msa1085740 | 0.843885 | 1.064235e-58 | -8.615850e-47 |
| Msa0933100 | Msa1085740 | 0.801463 | 8.900408e-49 | -8.615850e-47 |
| Msa0936300 | Msa1085740 | 0.805666 | 1.195908e-49 | -8.615850e-47 |
| Msa0942200 | Msa1085740 | 0.804134 | 2.499655e-49 | -8.615850e-47 |
| Msa0947660 | Msa1085740 | 0.810196 | 1.299893e-50 | -8.615850e-47 |
| Msa0953120 | Msa1085740 | 0.838666 | 2.511932e-57 | -8.615850e-47 |
| Msa0954910 | Msa1085740 | 0.817944 | 2.535678e-52 | -8.615850e-47 |
| Msa0956270 | Msa1085740 | 0.809640 | 1.712310e-50 | -8.615850e-47 |
| Msa0958550 | Msa1085740 | 0.823332 | 1.466587e-53 | -8.615850e-47 |
| Msa0964900 | Msa1085740 | 0.818697 | 1.712447e-52 | -8.615850e-47 |
| Msa0969520 | Msa1085740 | 0.825921 | 3.601587e-54 | -8.615850e-47 |
| Msa0969670 | Msa1085740 | 0.803221 | 3.866809e-49 | -8.615850e-47 |
| Msa0973100 | Msa1085740 | 0.806083 | 9.771598e-50 | -8.615850e-47 |
| Msa0974080 | Msa1085740 | 0.812261 | 4.634282e-51 | -8.615850e-47 |
| Msa0976670 | Msa1085740 | 0.813686 | 2.256863e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085740 | MtrunA17_Chr2g0322371 | 95.539 | 269 | 11 | 1 | 1 | 268 | 1 | 269 | 2.33e-176 | 504 |
| Msa1085740 | MtrunA17_Chr2g0322361 | 88.889 | 279 | 20 | 4 | 1 | 268 | 1 | 279 | 3.96e-166 | 478 |
| Msa1085740 | MtrunA17_Chr2g0322341 | 63.043 | 276 | 94 | 4 | 1 | 268 | 3 | 278 | 6.79e-119 | 344 |
| Msa1085740 | MtrunA17_Chr4g0025201 | 64.260 | 277 | 88 | 5 | 1 | 269 | 1 | 274 | 1.55e-110 | 335 |
| Msa1085740 | MtrunA17_Chr2g0322351 | 61.011 | 277 | 98 | 4 | 1 | 269 | 1 | 275 | 9.15e-108 | 328 |
| Msa1085740 | MtrunA17_Chr8g0364641 | 39.527 | 296 | 149 | 8 | 1 | 269 | 182 | 474 | 5.71e-60 | 204 |
| Msa1085740 | MtrunA17_Chr3g0102531 | 38.966 | 290 | 150 | 9 | 1 | 269 | 1 | 284 | 1.21e-59 | 201 |
| Msa1085740 | MtrunA17_Chr8g0383701 | 40.339 | 295 | 149 | 7 | 1 | 269 | 266 | 559 | 1.30e-58 | 201 |
| Msa1085740 | MtrunA17_Chr3g0088821 | 39.394 | 297 | 149 | 8 | 1 | 269 | 248 | 541 | 2.25e-58 | 200 |
| Msa1085740 | MtrunA17_Chr8g0379241 | 40.809 | 272 | 137 | 6 | 21 | 269 | 196 | 466 | 1.27e-57 | 198 |
| Msa1085740 | MtrunA17_Chr3g0102551 | 37.201 | 293 | 146 | 7 | 8 | 269 | 10 | 295 | 1.29e-57 | 196 |
| Msa1085740 | MtrunA17_Chr3g0137951 | 40.441 | 272 | 138 | 6 | 21 | 269 | 281 | 551 | 1.60e-57 | 198 |
| Msa1085740 | MtrunA17_Chr3g0102541 | 38.567 | 293 | 148 | 10 | 1 | 269 | 1 | 285 | 7.09e-57 | 194 |
| Msa1085740 | MtrunA17_Chr3g0078671 | 40.441 | 272 | 138 | 6 | 21 | 269 | 238 | 508 | 1.66e-56 | 195 |
| Msa1085740 | MtrunA17_Chr2g0284211 | 40.293 | 273 | 137 | 8 | 21 | 269 | 181 | 451 | 2.62e-56 | 194 |
| Msa1085740 | MtrunA17_Chr1g0201731 | 39.590 | 293 | 150 | 8 | 3 | 269 | 270 | 561 | 6.12e-55 | 191 |
| Msa1085740 | MtrunA17_Chr4g0073711 | 38.644 | 295 | 154 | 7 | 1 | 269 | 228 | 521 | 7.88e-55 | 190 |
| Msa1085740 | MtrunA17_Chr8g0352231 | 40.637 | 251 | 127 | 6 | 39 | 269 | 293 | 541 | 6.82e-54 | 187 |
| Msa1085740 | MtrunA17_Chr2g0296991 | 39.583 | 288 | 147 | 7 | 8 | 269 | 206 | 492 | 7.94e-54 | 187 |
| Msa1085740 | MtrunA17_Chr1g0183381 | 37.847 | 288 | 152 | 7 | 8 | 269 | 107 | 393 | 1.05e-53 | 186 |
| Msa1085740 | MtrunA17_Chr7g0267731 | 36.949 | 295 | 159 | 7 | 1 | 269 | 160 | 453 | 3.82e-53 | 185 |
| Msa1085740 | MtrunA17_Chr1g0186381 | 35.439 | 285 | 154 | 6 | 4 | 268 | 6 | 280 | 4.26e-47 | 167 |
| Msa1085740 | MtrunA17_Chr1g0165421 | 33.642 | 324 | 135 | 8 | 26 | 269 | 276 | 599 | 1.28e-46 | 167 |
| Msa1085740 | MtrunA17_Chr1g0165411 | 32.923 | 325 | 142 | 7 | 21 | 269 | 261 | 585 | 1.37e-46 | 167 |
| Msa1085740 | MtrunA17_Chr7g0274751 | 34.416 | 308 | 156 | 8 | 8 | 269 | 96 | 403 | 1.12e-45 | 164 |
| Msa1085740 | MtrunA17_Chr4g0046401 | 38.261 | 230 | 132 | 6 | 45 | 269 | 57 | 281 | 1.52e-45 | 162 |
| Msa1085740 | MtrunA17_Chr2g0298581 | 35.985 | 264 | 145 | 6 | 16 | 269 | 8 | 257 | 1.55e-45 | 162 |
| Msa1085740 | MtrunA17_Chr3g0095791 | 34.601 | 263 | 149 | 6 | 16 | 269 | 8 | 256 | 1.56e-45 | 162 |
| Msa1085740 | MtrunA17_Chr7g0269741 | 31.897 | 348 | 157 | 9 | 2 | 269 | 291 | 638 | 3.13e-45 | 163 |
| Msa1085740 | MtrunA17_Chr4g0039801 | 31.195 | 343 | 155 | 7 | 8 | 269 | 273 | 615 | 3.59e-45 | 162 |
| Msa1085740 | MtrunA17_Chr5g0410641 | 32.558 | 344 | 149 | 9 | 8 | 269 | 252 | 594 | 1.21e-44 | 161 |
| Msa1085740 | MtrunA17_Chr2g0307191 | 36.078 | 255 | 145 | 5 | 19 | 269 | 17 | 257 | 1.82e-44 | 159 |
| Msa1085740 | MtrunA17_Chr2g0297351 | 31.304 | 345 | 153 | 14 | 8 | 269 | 159 | 502 | 1.77e-41 | 152 |
| Msa1085740 | MtrunA17_Chr3g0077511 | 33.333 | 264 | 152 | 6 | 16 | 269 | 8 | 257 | 5.88e-41 | 149 |
| Msa1085740 | MtrunA17_Chr2g0307241 | 41.176 | 170 | 95 | 3 | 20 | 185 | 18 | 186 | 1.76e-36 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085740 | AT2G32530.1 | 55.882 | 272 | 107 | 3 | 8 | 269 | 10 | 278 | 1.76e-97 | 302 |
| Msa1085740 | AT4G15320.2 | 55.678 | 273 | 108 | 3 | 7 | 269 | 9 | 278 | 8.58e-96 | 298 |
| Msa1085740 | AT4G15320.3 | 55.311 | 273 | 109 | 3 | 7 | 269 | 9 | 278 | 1.51e-95 | 297 |
| Msa1085740 | AT4G15320.5 | 55.311 | 273 | 109 | 3 | 7 | 269 | 9 | 278 | 1.91e-95 | 297 |
| Msa1085740 | AT2G32620.2 | 55.390 | 269 | 113 | 2 | 8 | 269 | 10 | 278 | 6.91e-93 | 285 |
| Msa1085740 | AT4G15320.4 | 52.431 | 288 | 109 | 4 | 7 | 269 | 9 | 293 | 3.63e-92 | 289 |
| Msa1085740 | AT2G32620.3 | 55.390 | 269 | 113 | 2 | 8 | 269 | 10 | 278 | 6.64e-92 | 284 |
| Msa1085740 | AT2G32540.1 | 55.926 | 270 | 110 | 3 | 8 | 269 | 10 | 278 | 4.15e-91 | 285 |
| Msa1085740 | AT2G32620.1 | 55.390 | 269 | 113 | 2 | 8 | 269 | 10 | 278 | 1.18e-90 | 284 |
| Msa1085740 | AT4G15320.1 | 48.418 | 316 | 107 | 4 | 7 | 269 | 9 | 321 | 1.23e-88 | 281 |
| Msa1085740 | AT2G32610.1 | 51.481 | 270 | 123 | 3 | 8 | 269 | 10 | 279 | 6.49e-87 | 275 |
| Msa1085740 | AT4G15290.1 | 50.370 | 270 | 125 | 3 | 8 | 269 | 10 | 278 | 1.63e-79 | 255 |
| Msa1085740 | AT2G32620.4 | 57.143 | 182 | 73 | 1 | 93 | 269 | 1 | 182 | 4.69e-66 | 218 |
| Msa1085740 | AT4G32410.1 | 40.203 | 296 | 148 | 8 | 1 | 269 | 252 | 545 | 3.26e-59 | 203 |
| Msa1085740 | AT2G25540.1 | 38.514 | 296 | 153 | 8 | 1 | 269 | 232 | 525 | 1.51e-57 | 198 |
| Msa1085740 | AT5G09870.1 | 38.983 | 295 | 153 | 7 | 1 | 269 | 241 | 534 | 3.88e-57 | 197 |
| Msa1085740 | AT4G39350.1 | 40.878 | 296 | 146 | 9 | 1 | 269 | 254 | 547 | 4.26e-57 | 197 |
| Msa1085740 | AT4G18780.1 | 40.217 | 276 | 143 | 5 | 16 | 269 | 179 | 454 | 6.30e-57 | 196 |
| Msa1085740 | AT1G55850.1 | 38.246 | 285 | 144 | 9 | 8 | 269 | 18 | 293 | 9.84e-57 | 194 |
| Msa1085740 | AT2G21770.1 | 40.878 | 296 | 146 | 9 | 1 | 269 | 259 | 552 | 9.46e-56 | 193 |
| Msa1085740 | AT5G05170.1 | 37.966 | 295 | 156 | 7 | 1 | 269 | 236 | 529 | 1.58e-55 | 192 |
| Msa1085740 | AT5G64740.1 | 39.057 | 297 | 150 | 8 | 1 | 269 | 253 | 546 | 1.99e-55 | 192 |
| Msa1085740 | AT5G17420.1 | 38.983 | 295 | 153 | 8 | 1 | 269 | 215 | 508 | 4.14e-55 | 191 |
| Msa1085740 | AT5G44030.1 | 39.583 | 288 | 147 | 8 | 8 | 269 | 199 | 485 | 6.35e-54 | 188 |
| Msa1085740 | AT5G44030.2 | 39.583 | 288 | 147 | 8 | 8 | 269 | 228 | 514 | 6.51e-54 | 188 |
| Msa1085740 | AT4G38190.1 | 32.000 | 325 | 139 | 9 | 26 | 269 | 273 | 596 | 4.11e-45 | 163 |
| Msa1085740 | AT5G44030.3 | 44.898 | 196 | 95 | 4 | 87 | 269 | 11 | 206 | 4.65e-45 | 162 |
| Msa1085740 | AT4G23990.1 | 35.874 | 223 | 133 | 3 | 57 | 269 | 86 | 308 | 1.10e-44 | 160 |
| Msa1085740 | AT3G03050.1 | 32.551 | 341 | 151 | 8 | 8 | 269 | 278 | 618 | 1.76e-44 | 161 |
| Msa1085740 | AT4G24010.1 | 35.874 | 223 | 133 | 3 | 57 | 269 | 67 | 289 | 7.90e-44 | 158 |
| Msa1085740 | AT2G33100.2 | 30.321 | 343 | 158 | 8 | 8 | 269 | 167 | 509 | 1.39e-42 | 155 |
| Msa1085740 | AT2G33100.1 | 30.321 | 343 | 158 | 8 | 8 | 269 | 167 | 509 | 1.39e-42 | 155 |
| Msa1085740 | AT1G02730.1 | 31.445 | 353 | 155 | 10 | 2 | 269 | 296 | 646 | 1.70e-42 | 155 |
| Msa1085740 | AT5G16910.1 | 33.438 | 320 | 140 | 7 | 23 | 269 | 302 | 621 | 1.86e-42 | 155 |
| Msa1085740 | AT4G24000.1 | 35.814 | 215 | 135 | 2 | 58 | 269 | 65 | 279 | 4.02e-42 | 153 |
| Msa1085740 | AT1G32180.1 | 32.432 | 333 | 137 | 8 | 25 | 269 | 123 | 455 | 5.20e-41 | 151 |
| Msa1085740 | AT1G32180.2 | 32.432 | 333 | 137 | 8 | 25 | 269 | 123 | 455 | 5.20e-41 | 151 |
Find 47 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCCAAAACTTAGCAAATT+TGG | 0.129090 | 7_2:-86653094 | None:intergenic |
| CTTCCAAATTTGCTAAGTTT+TGG | 0.203327 | 7_2:+86653091 | Msa1085740:CDS |
| TTGTAATTGTGTTCATAATT+TGG | 0.215230 | 7_2:-86653873 | None:intergenic |
| AACCATTCTTGTTTGAATTC+TGG | 0.245579 | 7_2:-86653195 | None:intergenic |
| TTGGAATGAAGCTGAATTTC+GGG | 0.257400 | 7_2:-86653459 | None:intergenic |
| TTGCTTTCTCATGTGAATCT+TGG | 0.274164 | 7_2:+86652257 | Msa1085740:CDS |
| AGCTTCCAAAAGACCATAAA+AGG | 0.292008 | 7_2:-86653070 | None:intergenic |
| CTGCAAATTCTCCCTCAAAT+TGG | 0.301372 | 7_2:-86653478 | None:intergenic |
| TATGCGTTGACAGGTTATAT+TGG | 0.311069 | 7_2:+86653797 | Msa1085740:intron |
| TTCTGGTGAATCATCACTTT+TGG | 0.313648 | 7_2:-86653178 | None:intergenic |
| GCTTGTTATGTTTCTGATGA+TGG | 0.315570 | 7_2:+86653033 | Msa1085740:CDS |
| GAATCATCCAAGTATAATTA+AGG | 0.336801 | 7_2:+86653523 | Msa1085740:CDS |
| ATTGGAATGAAGCTGAATTT+CGG | 0.338929 | 7_2:-86653460 | None:intergenic |
| ATAATTTGGTCTCTTCTCTC+TGG | 0.366584 | 7_2:-86653859 | None:intergenic |
| ACTTGAGAGAAATATCTAAA+AGG | 0.378307 | 7_2:-86653153 | None:intergenic |
| TTTATTACCTTAATTATACT+TGG | 0.407006 | 7_2:-86653530 | None:intergenic |
| TTCGCAGAGCTAAATAATAT+TGG | 0.411414 | 7_2:-86653931 | None:intergenic |
| TTCAGCTTCATTCCAATTTG+AGG | 0.436875 | 7_2:+86653466 | Msa1085740:CDS |
| TACCGTTGAAGGAGACGGTT+TGG | 0.441157 | 7_2:-86652343 | None:intergenic |
| TTTATATTACATACCGTTGA+AGG | 0.450188 | 7_2:-86652354 | None:intergenic |
| CACCAGAATTCAAACAAGAA+TGG | 0.451883 | 7_2:+86653193 | Msa1085740:CDS |
| TCAGCTTCATTCCAATTTGA+GGG | 0.456850 | 7_2:+86653467 | Msa1085740:CDS |
| TTATTCTTCTCAATACCAAA+TGG | 0.468145 | 7_2:+86652296 | Msa1085740:CDS |
| ACAAGAATGGTTACAAATGA+AGG | 0.473858 | 7_2:+86653206 | Msa1085740:CDS |
| GTTAACAGCAGGACTCCATT+TGG | 0.481702 | 7_2:-86652311 | None:intergenic |
| ATGATTGGTGGTTCTAGAAC+AGG | 0.483104 | 7_2:-86652955 | None:intergenic |
| TAACAAGCTAGCTTATTAGC+TGG | 0.493726 | 7_2:-86653018 | None:intergenic |
| TACCAACACATTCATAGCTC+CGG | 0.494183 | 7_2:-86653898 | None:intergenic |
| ATATTGGATGGTCATTCTGA+TGG | 0.497574 | 7_2:+86653813 | Msa1085740:CDS |
| GGTAACAAAGAAGAGAGAAT+AGG | 0.498755 | 7_2:-86652201 | None:intergenic |
| CGTTGACAGGTTATATTGGA+TGG | 0.505316 | 7_2:+86653801 | Msa1085740:intron |
| ATATTATACTTCTTACAGAA+AGG | 0.520036 | 7_2:-86653117 | None:intergenic |
| TTGTGAAGGTGTTGTTGATA+CGG | 0.520835 | 7_2:-86652222 | None:intergenic |
| AATCTTGGTTCACATACACT+TGG | 0.525534 | 7_2:+86652272 | Msa1085740:CDS |
| ACAACACCTTCACAATTCCA+TGG | 0.549695 | 7_2:+86652230 | Msa1085740:CDS |
| ACAGTGTTCAATGTGATGAT+TGG | 0.552842 | 7_2:-86652970 | None:intergenic |
| TATGAACACAATTACAAAGC+CGG | 0.562840 | 7_2:+86653879 | Msa1085740:CDS |
| AACAAAGAAGAGAGAATAGG+AGG | 0.565555 | 7_2:-86652198 | None:intergenic |
| ATCCAAACCGTCTCCTTCAA+CGG | 0.575866 | 7_2:+86652341 | Msa1085740:CDS |
| CATGAGAAAGCAAGAAACCA+TGG | 0.578989 | 7_2:-86652247 | None:intergenic |
| GTGTTCAATGTGATGATTGG+TGG | 0.582750 | 7_2:-86652967 | None:intergenic |
| TTACATACCGTTGAAGGAGA+CGG | 0.598803 | 7_2:-86652348 | None:intergenic |
| AGTACAGGAGCTTCCATGTG+TGG | 0.605203 | 7_2:+86652909 | Msa1085740:CDS |
| AGCCGGAGCTATGAATGTGT+TGG | 0.613715 | 7_2:+86653896 | Msa1085740:CDS |
| AAGAAACCATGGAATTGTGA+AGG | 0.621466 | 7_2:-86652236 | None:intergenic |
| CTGGATATGTAGATTAAGTG+AGG | 0.630306 | 7_2:-86653840 | None:intergenic |
| GTCACAAACAAATCCACACA+TGG | 0.687294 | 7_2:-86652922 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTAGACAACTTTTTAA+GGG | - | chr7_2:86652812-86652831 | None:intergenic | 15.0% |
| !! | TTTATTACCTTAATTATACT+TGG | - | chr7_2:86653533-86653552 | None:intergenic | 15.0% |
| !!! | AAATTTAGACAACTTTTTAA+GGG | - | chr7_2:86652812-86652831 | None:intergenic | 15.0% |
| !! | TTTATTACCTTAATTATACT+TGG | - | chr7_2:86653533-86653552 | None:intergenic | 15.0% |
| !! | AGTTGAAAACTTGAAAATTA+TGG | + | chr7_2:86652725-86652744 | Msa1085740:intron | 20.0% |
| !!! | AATTTAGACAACTTTTTAAG+GGG | - | chr7_2:86652811-86652830 | None:intergenic | 20.0% |
| !!! | CAAATTTAGACAACTTTTTA+AGG | - | chr7_2:86652813-86652832 | None:intergenic | 20.0% |
| !! | CTTAAAAAGTTGTCTAAATT+TGG | + | chr7_2:86652811-86652830 | Msa1085740:intron | 20.0% |
| !! | AAACTAATTAGCAAGATAAA+TGG | - | chr7_2:86652846-86652865 | None:intergenic | 20.0% |
| !! | ATATTATACTTCTTACAGAA+AGG | - | chr7_2:86653120-86653139 | None:intergenic | 20.0% |
| !! | TATTCTCAAATACAGAAAAA+AGG | + | chr7_2:86653501-86653520 | Msa1085740:CDS | 20.0% |
| !! | ATTTGTTCAATTATAGAACA+AGG | - | chr7_2:86653600-86653619 | None:intergenic | 20.0% |
| !!! | ATAATTGAACAAATTTTAGC+AGG | + | chr7_2:86653606-86653625 | Msa1085740:intron | 20.0% |
| !! | TTGTAATTGTGTTCATAATT+TGG | - | chr7_2:86653876-86653895 | None:intergenic | 20.0% |
| !! | AGTTGAAAACTTGAAAATTA+TGG | + | chr7_2:86652725-86652744 | Msa1085740:intron | 20.0% |
| !!! | AATTTAGACAACTTTTTAAG+GGG | - | chr7_2:86652811-86652830 | None:intergenic | 20.0% |
| !!! | CAAATTTAGACAACTTTTTA+AGG | - | chr7_2:86652813-86652832 | None:intergenic | 20.0% |
| !! | CTTAAAAAGTTGTCTAAATT+TGG | + | chr7_2:86652811-86652830 | Msa1085740:intron | 20.0% |
| !! | AAACTAATTAGCAAGATAAA+TGG | - | chr7_2:86652846-86652865 | None:intergenic | 20.0% |
| !! | ATATTATACTTCTTACAGAA+AGG | - | chr7_2:86653120-86653139 | None:intergenic | 20.0% |
| !! | TATTCTCAAATACAGAAAAA+AGG | + | chr7_2:86653501-86653520 | Msa1085740:CDS | 20.0% |
| !! | ATTTGTTCAATTATAGAACA+AGG | - | chr7_2:86653600-86653619 | None:intergenic | 20.0% |
| !!! | ATAATTGAACAAATTTTAGC+AGG | + | chr7_2:86653606-86653625 | Msa1085740:intron | 20.0% |
| !! | TTGTAATTGTGTTCATAATT+TGG | - | chr7_2:86653876-86653895 | None:intergenic | 20.0% |
| !!! | TCCATATTTTTTCATACAGA+GGG | - | chr7_2:86652135-86652154 | None:intergenic | 25.0% |
| !!! | ATCCATATTTTTTCATACAG+AGG | - | chr7_2:86652136-86652155 | None:intergenic | 25.0% |
| ! | TTATTCTTCTCAATACCAAA+TGG | + | chr7_2:86652296-86652315 | Msa1085740:CDS | 25.0% |
| ! | TTTATATTACATACCGTTGA+AGG | - | chr7_2:86652357-86652376 | None:intergenic | 25.0% |
| !!! | GACAACGTTTTAATAAAGTT+CGG | + | chr7_2:86652603-86652622 | Msa1085740:intron | 25.0% |
| ! | GTTAATGCAGATTAAAGATA+AGG | - | chr7_2:86652789-86652808 | None:intergenic | 25.0% |
| !!! | TGTTCTGTTTTTACCTTTTA+TGG | + | chr7_2:86653057-86653076 | Msa1085740:CDS | 25.0% |
| !! | TTTTACCTTTTATGGTCTTT+TGG | + | chr7_2:86653065-86653084 | Msa1085740:CDS | 25.0% |
| !!! | TTCCAAATTTGCTAAGTTTT+GGG | + | chr7_2:86653092-86653111 | Msa1085740:CDS | 25.0% |
| ! | ACTTGAGAGAAATATCTAAA+AGG | - | chr7_2:86653156-86653175 | None:intergenic | 25.0% |
| ! | CAGATAAGTATCTAAATCTA+TGG | + | chr7_2:86653271-86653290 | Msa1085740:intron | 25.0% |
| ! | ATAAGTATCTAAATCTATGG+TGG | + | chr7_2:86653274-86653293 | Msa1085740:intron | 25.0% |
| ! | GAGATAAGTATCTAAATCTA+TGG | + | chr7_2:86653318-86653337 | Msa1085740:intron | 25.0% |
| ! | ATAAGTATCTAAATCTATGG+TGG | + | chr7_2:86653274-86653293 | Msa1085740:intron | 25.0% |
| ! | GAATCATCCAAGTATAATTA+AGG | + | chr7_2:86653523-86653542 | Msa1085740:CDS | 25.0% |
| ! | AGAAATACTTGGAAGAATTT+AGG | - | chr7_2:86653660-86653679 | None:intergenic | 25.0% |
| ! | TAAATTCTTCCAAGTATTTC+TGG | + | chr7_2:86653659-86653678 | Msa1085740:intron | 25.0% |
| !!! | TCCATATTTTTTCATACAGA+GGG | - | chr7_2:86652135-86652154 | None:intergenic | 25.0% |
| !!! | ATCCATATTTTTTCATACAG+AGG | - | chr7_2:86652136-86652155 | None:intergenic | 25.0% |
| ! | TTATTCTTCTCAATACCAAA+TGG | + | chr7_2:86652296-86652315 | Msa1085740:CDS | 25.0% |
| ! | TTTATATTACATACCGTTGA+AGG | - | chr7_2:86652357-86652376 | None:intergenic | 25.0% |
| !!! | GACAACGTTTTAATAAAGTT+CGG | + | chr7_2:86652603-86652622 | Msa1085740:intron | 25.0% |
| ! | GTTAATGCAGATTAAAGATA+AGG | - | chr7_2:86652789-86652808 | None:intergenic | 25.0% |
| !!! | TGTTCTGTTTTTACCTTTTA+TGG | + | chr7_2:86653057-86653076 | Msa1085740:CDS | 25.0% |
| !! | TTTTACCTTTTATGGTCTTT+TGG | + | chr7_2:86653065-86653084 | Msa1085740:CDS | 25.0% |
| !!! | TTCCAAATTTGCTAAGTTTT+GGG | + | chr7_2:86653092-86653111 | Msa1085740:CDS | 25.0% |
| ! | ACTTGAGAGAAATATCTAAA+AGG | - | chr7_2:86653156-86653175 | None:intergenic | 25.0% |
| ! | CAGATAAGTATCTAAATCTA+TGG | + | chr7_2:86653271-86653290 | Msa1085740:intron | 25.0% |
| ! | ATAAGTATCTAAATCTATGG+TGG | + | chr7_2:86653274-86653293 | Msa1085740:intron | 25.0% |
| ! | GAGATAAGTATCTAAATCTA+TGG | + | chr7_2:86653318-86653337 | Msa1085740:intron | 25.0% |
| ! | ATAAGTATCTAAATCTATGG+TGG | + | chr7_2:86653274-86653293 | Msa1085740:intron | 25.0% |
| ! | GAATCATCCAAGTATAATTA+AGG | + | chr7_2:86653523-86653542 | Msa1085740:CDS | 25.0% |
| ! | AGAAATACTTGGAAGAATTT+AGG | - | chr7_2:86653660-86653679 | None:intergenic | 25.0% |
| ! | TAAATTCTTCCAAGTATTTC+TGG | + | chr7_2:86653659-86653678 | Msa1085740:intron | 25.0% |
| TCCCTCTGTATGAAAAAATA+TGG | + | chr7_2:86652131-86652150 | Msa1085740:CDS | 30.0% | |
| TGTGACTCAATCAATAGTTA+TGG | + | chr7_2:86652438-86652457 | Msa1085740:intron | 30.0% | |
| AAACTCATTAACCACCAATT+TGG | - | chr7_2:86652761-86652780 | None:intergenic | 30.0% | |
| ! | TTTTTATCCTCATAGAGTAC+AGG | + | chr7_2:86652894-86652913 | Msa1085740:intron | 30.0% |
| !!! | CTTCCAAATTTGCTAAGTTT+TGG | + | chr7_2:86653091-86653110 | Msa1085740:CDS | 30.0% |
| AACCCAAAACTTAGCAAATT+TGG | - | chr7_2:86653097-86653116 | None:intergenic | 30.0% | |
| ! | AACCATTCTTGTTTGAATTC+TGG | - | chr7_2:86653198-86653217 | None:intergenic | 30.0% |
| ACAAGAATGGTTACAAATGA+AGG | + | chr7_2:86653206-86653225 | Msa1085740:CDS | 30.0% | |
| TGCACAAGTAACAAATTTGT+AGG | + | chr7_2:86653353-86653372 | Msa1085740:intron | 30.0% | |
| CAAGTAACAAATTTGTAGGA+TGG | + | chr7_2:86653357-86653376 | Msa1085740:intron | 30.0% | |
| TGACAATCTTAGCCAAAAAA+TGG | + | chr7_2:86653427-86653446 | Msa1085740:CDS | 30.0% | |
| ATTGGAATGAAGCTGAATTT+CGG | - | chr7_2:86653463-86653482 | None:intergenic | 30.0% | |
| AACTCATATGTGAGTCAATT+AGG | - | chr7_2:86653752-86653771 | None:intergenic | 30.0% | |
| TATGAACACAATTACAAAGC+CGG | + | chr7_2:86653879-86653898 | Msa1085740:CDS | 30.0% | |
| TCCCTCTGTATGAAAAAATA+TGG | + | chr7_2:86652131-86652150 | Msa1085740:CDS | 30.0% | |
| TGTGACTCAATCAATAGTTA+TGG | + | chr7_2:86652438-86652457 | Msa1085740:intron | 30.0% | |
| AAACTCATTAACCACCAATT+TGG | - | chr7_2:86652761-86652780 | None:intergenic | 30.0% | |
| ! | TTTTTATCCTCATAGAGTAC+AGG | + | chr7_2:86652894-86652913 | Msa1085740:intron | 30.0% |
| !!! | CTTCCAAATTTGCTAAGTTT+TGG | + | chr7_2:86653091-86653110 | Msa1085740:CDS | 30.0% |
| AACCCAAAACTTAGCAAATT+TGG | - | chr7_2:86653097-86653116 | None:intergenic | 30.0% | |
| ! | AACCATTCTTGTTTGAATTC+TGG | - | chr7_2:86653198-86653217 | None:intergenic | 30.0% |
| ACAAGAATGGTTACAAATGA+AGG | + | chr7_2:86653206-86653225 | Msa1085740:CDS | 30.0% | |
| TGCACAAGTAACAAATTTGT+AGG | + | chr7_2:86653353-86653372 | Msa1085740:intron | 30.0% | |
| CAAGTAACAAATTTGTAGGA+TGG | + | chr7_2:86653357-86653376 | Msa1085740:intron | 30.0% | |
| TGACAATCTTAGCCAAAAAA+TGG | + | chr7_2:86653427-86653446 | Msa1085740:CDS | 30.0% | |
| ATTGGAATGAAGCTGAATTT+CGG | - | chr7_2:86653463-86653482 | None:intergenic | 30.0% | |
| AACTCATATGTGAGTCAATT+AGG | - | chr7_2:86653752-86653771 | None:intergenic | 30.0% | |
| TATGAACACAATTACAAAGC+CGG | + | chr7_2:86653879-86653898 | Msa1085740:CDS | 30.0% | |
| AACAAAGAAGAGAGAATAGG+AGG | - | chr7_2:86652201-86652220 | None:intergenic | 35.0% | |
| GGTAACAAAGAAGAGAGAAT+AGG | - | chr7_2:86652204-86652223 | None:intergenic | 35.0% | |
| !! | TTGTGAAGGTGTTGTTGATA+CGG | - | chr7_2:86652225-86652244 | None:intergenic | 35.0% |
| AAGAAACCATGGAATTGTGA+AGG | - | chr7_2:86652239-86652258 | None:intergenic | 35.0% | |
| TTGCTTTCTCATGTGAATCT+TGG | + | chr7_2:86652257-86652276 | Msa1085740:CDS | 35.0% | |
| AATCTTGGTTCACATACACT+TGG | + | chr7_2:86652272-86652291 | Msa1085740:CDS | 35.0% | |
| !! | GGATATGTTTTGTTAACAGC+AGG | - | chr7_2:86652325-86652344 | None:intergenic | 35.0% |
| ATGTCTCAGTTTATATGTCG+CGG | + | chr7_2:86652490-86652509 | Msa1085740:intron | 35.0% | |
| ATGGTTAACCATGTCCAAAT+TGG | + | chr7_2:86652744-86652763 | Msa1085740:intron | 35.0% | |
| ATTAACCACCAATTTGGACA+TGG | - | chr7_2:86652755-86652774 | None:intergenic | 35.0% | |
| ACAGTGTTCAATGTGATGAT+TGG | - | chr7_2:86652973-86652992 | None:intergenic | 35.0% | |
| ! | TAACAAGCTAGCTTATTAGC+TGG | - | chr7_2:86653021-86653040 | None:intergenic | 35.0% |
| !! | GCTTGTTATGTTTCTGATGA+TGG | + | chr7_2:86653033-86653052 | Msa1085740:CDS | 35.0% |
| AGCTTCCAAAAGACCATAAA+AGG | - | chr7_2:86653073-86653092 | None:intergenic | 35.0% | |
| ! | TTCTGGTGAATCATCACTTT+TGG | - | chr7_2:86653181-86653200 | None:intergenic | 35.0% |
| CACCAGAATTCAAACAAGAA+TGG | + | chr7_2:86653193-86653212 | Msa1085740:CDS | 35.0% | |
| AAACACAGACGAATCATCAA+TGG | - | chr7_2:86653391-86653410 | None:intergenic | 35.0% | |
| !!! | ATTCGTCTGTGTTTTTTTGC+AGG | + | chr7_2:86653397-86653416 | Msa1085740:intron | 35.0% |
| TTGGAATGAAGCTGAATTTC+GGG | - | chr7_2:86653462-86653481 | None:intergenic | 35.0% | |
| TTCAGCTTCATTCCAATTTG+AGG | + | chr7_2:86653466-86653485 | Msa1085740:CDS | 35.0% | |
| TCAGCTTCATTCCAATTTGA+GGG | + | chr7_2:86653467-86653486 | Msa1085740:CDS | 35.0% | |
| ATGCAAGAACCAGAAATACT+TGG | - | chr7_2:86653671-86653690 | None:intergenic | 35.0% | |
| GACTAGGAATGAACTAATTG+AGG | - | chr7_2:86653721-86653740 | None:intergenic | 35.0% | |
| ! | CAATTAGGTTCATATCGACT+AGG | - | chr7_2:86653737-86653756 | None:intergenic | 35.0% |
| ! | TATGCGTTGACAGGTTATAT+TGG | + | chr7_2:86653797-86653816 | Msa1085740:intron | 35.0% |
| ATATTGGATGGTCATTCTGA+TGG | + | chr7_2:86653813-86653832 | Msa1085740:CDS | 35.0% | |
| CTGGATATGTAGATTAAGTG+AGG | - | chr7_2:86653843-86653862 | None:intergenic | 35.0% | |
| ATAATTTGGTCTCTTCTCTC+TGG | - | chr7_2:86653862-86653881 | None:intergenic | 35.0% | |
| AACAAAGAAGAGAGAATAGG+AGG | - | chr7_2:86652201-86652220 | None:intergenic | 35.0% | |
| GGTAACAAAGAAGAGAGAAT+AGG | - | chr7_2:86652204-86652223 | None:intergenic | 35.0% | |
| !! | TTGTGAAGGTGTTGTTGATA+CGG | - | chr7_2:86652225-86652244 | None:intergenic | 35.0% |
| AAGAAACCATGGAATTGTGA+AGG | - | chr7_2:86652239-86652258 | None:intergenic | 35.0% | |
| TTGCTTTCTCATGTGAATCT+TGG | + | chr7_2:86652257-86652276 | Msa1085740:CDS | 35.0% | |
| AATCTTGGTTCACATACACT+TGG | + | chr7_2:86652272-86652291 | Msa1085740:CDS | 35.0% | |
| !! | GGATATGTTTTGTTAACAGC+AGG | - | chr7_2:86652325-86652344 | None:intergenic | 35.0% |
| ATGTCTCAGTTTATATGTCG+CGG | + | chr7_2:86652490-86652509 | Msa1085740:intron | 35.0% | |
| ATGGTTAACCATGTCCAAAT+TGG | + | chr7_2:86652744-86652763 | Msa1085740:intron | 35.0% | |
| ATTAACCACCAATTTGGACA+TGG | - | chr7_2:86652755-86652774 | None:intergenic | 35.0% | |
| ACAGTGTTCAATGTGATGAT+TGG | - | chr7_2:86652973-86652992 | None:intergenic | 35.0% | |
| ! | TAACAAGCTAGCTTATTAGC+TGG | - | chr7_2:86653021-86653040 | None:intergenic | 35.0% |
| !! | GCTTGTTATGTTTCTGATGA+TGG | + | chr7_2:86653033-86653052 | Msa1085740:CDS | 35.0% |
| AGCTTCCAAAAGACCATAAA+AGG | - | chr7_2:86653073-86653092 | None:intergenic | 35.0% | |
| ! | TTCTGGTGAATCATCACTTT+TGG | - | chr7_2:86653181-86653200 | None:intergenic | 35.0% |
| CACCAGAATTCAAACAAGAA+TGG | + | chr7_2:86653193-86653212 | Msa1085740:CDS | 35.0% | |
| AAACACAGACGAATCATCAA+TGG | - | chr7_2:86653391-86653410 | None:intergenic | 35.0% | |
| !!! | ATTCGTCTGTGTTTTTTTGC+AGG | + | chr7_2:86653397-86653416 | Msa1085740:intron | 35.0% |
| TTGGAATGAAGCTGAATTTC+GGG | - | chr7_2:86653462-86653481 | None:intergenic | 35.0% | |
| TTCAGCTTCATTCCAATTTG+AGG | + | chr7_2:86653466-86653485 | Msa1085740:CDS | 35.0% | |
| TCAGCTTCATTCCAATTTGA+GGG | + | chr7_2:86653467-86653486 | Msa1085740:CDS | 35.0% | |
| ATGCAAGAACCAGAAATACT+TGG | - | chr7_2:86653671-86653690 | None:intergenic | 35.0% | |
| GACTAGGAATGAACTAATTG+AGG | - | chr7_2:86653721-86653740 | None:intergenic | 35.0% | |
| ! | CAATTAGGTTCATATCGACT+AGG | - | chr7_2:86653737-86653756 | None:intergenic | 35.0% |
| ! | TATGCGTTGACAGGTTATAT+TGG | + | chr7_2:86653797-86653816 | Msa1085740:intron | 35.0% |
| ATATTGGATGGTCATTCTGA+TGG | + | chr7_2:86653813-86653832 | Msa1085740:CDS | 35.0% | |
| CTGGATATGTAGATTAAGTG+AGG | - | chr7_2:86653843-86653862 | None:intergenic | 35.0% | |
| ATAATTTGGTCTCTTCTCTC+TGG | - | chr7_2:86653862-86653881 | None:intergenic | 35.0% | |
| ! | CATACAGAGGGAGATTTTCT+TGG | - | chr7_2:86652123-86652142 | None:intergenic | 40.0% |
| ACAACACCTTCACAATTCCA+TGG | + | chr7_2:86652230-86652249 | Msa1085740:CDS | 40.0% | |
| CATGAGAAAGCAAGAAACCA+TGG | - | chr7_2:86652250-86652269 | None:intergenic | 40.0% | |
| TTACATACCGTTGAAGGAGA+CGG | - | chr7_2:86652351-86652370 | None:intergenic | 40.0% | |
| AATGATCGACGAAGTCACTT+TGG | - | chr7_2:86652676-86652695 | None:intergenic | 40.0% | |
| ! | GACTTCGTCGATCATTGATT+TGG | + | chr7_2:86652680-86652699 | Msa1085740:intron | 40.0% |
| GTTAACCATGTCCAAATTGG+TGG | + | chr7_2:86652747-86652766 | Msa1085740:intron | 40.0% | |
| GTCACAAACAAATCCACACA+TGG | - | chr7_2:86652925-86652944 | None:intergenic | 40.0% | |
| !! | ATGATTGGTGGTTCTAGAAC+AGG | - | chr7_2:86652958-86652977 | None:intergenic | 40.0% |
| GTGTTCAATGTGATGATTGG+TGG | - | chr7_2:86652970-86652989 | None:intergenic | 40.0% | |
| ! | GAACACTGTTTTGTCTCTGT+TGG | + | chr7_2:86652984-86653003 | Msa1085740:CDS | 40.0% |
| !!! | GGGTCACATCTTCCATTTTT+TGG | - | chr7_2:86653442-86653461 | None:intergenic | 40.0% |
| CTGCAAATTCTCCCTCAAAT+TGG | - | chr7_2:86653481-86653500 | None:intergenic | 40.0% | |
| ! | CACTTACATTATGCGTTGAC+AGG | + | chr7_2:86653788-86653807 | Msa1085740:intron | 40.0% |
| CGTTGACAGGTTATATTGGA+TGG | + | chr7_2:86653801-86653820 | Msa1085740:intron | 40.0% | |
| TACCAACACATTCATAGCTC+CGG | - | chr7_2:86653901-86653920 | None:intergenic | 40.0% | |
| ! | CATACAGAGGGAGATTTTCT+TGG | - | chr7_2:86652123-86652142 | None:intergenic | 40.0% |
| ACAACACCTTCACAATTCCA+TGG | + | chr7_2:86652230-86652249 | Msa1085740:CDS | 40.0% | |
| CATGAGAAAGCAAGAAACCA+TGG | - | chr7_2:86652250-86652269 | None:intergenic | 40.0% | |
| TTACATACCGTTGAAGGAGA+CGG | - | chr7_2:86652351-86652370 | None:intergenic | 40.0% | |
| AATGATCGACGAAGTCACTT+TGG | - | chr7_2:86652676-86652695 | None:intergenic | 40.0% | |
| ! | GACTTCGTCGATCATTGATT+TGG | + | chr7_2:86652680-86652699 | Msa1085740:intron | 40.0% |
| GTTAACCATGTCCAAATTGG+TGG | + | chr7_2:86652747-86652766 | Msa1085740:intron | 40.0% | |
| GTCACAAACAAATCCACACA+TGG | - | chr7_2:86652925-86652944 | None:intergenic | 40.0% | |
| !! | ATGATTGGTGGTTCTAGAAC+AGG | - | chr7_2:86652958-86652977 | None:intergenic | 40.0% |
| GTGTTCAATGTGATGATTGG+TGG | - | chr7_2:86652970-86652989 | None:intergenic | 40.0% | |
| ! | GAACACTGTTTTGTCTCTGT+TGG | + | chr7_2:86652984-86653003 | Msa1085740:CDS | 40.0% |
| !!! | GGGTCACATCTTCCATTTTT+TGG | - | chr7_2:86653442-86653461 | None:intergenic | 40.0% |
| CTGCAAATTCTCCCTCAAAT+TGG | - | chr7_2:86653481-86653500 | None:intergenic | 40.0% | |
| ! | CACTTACATTATGCGTTGAC+AGG | + | chr7_2:86653788-86653807 | Msa1085740:intron | 40.0% |
| CGTTGACAGGTTATATTGGA+TGG | + | chr7_2:86653801-86653820 | Msa1085740:intron | 40.0% | |
| TACCAACACATTCATAGCTC+CGG | - | chr7_2:86653901-86653920 | None:intergenic | 40.0% | |
| ! | CAGAGGGAGATTTTCTTGGT+TGG | - | chr7_2:86652119-86652138 | None:intergenic | 45.0% |
| GTTAACAGCAGGACTCCATT+TGG | - | chr7_2:86652314-86652333 | None:intergenic | 45.0% | |
| ATCCAAACCGTCTCCTTCAA+CGG | + | chr7_2:86652341-86652360 | Msa1085740:CDS | 45.0% | |
| ATACGCTTCGATCGTGATCA+TGG | - | chr7_2:86652647-86652666 | None:intergenic | 45.0% | |
| ! | CAGAGGGAGATTTTCTTGGT+TGG | - | chr7_2:86652119-86652138 | None:intergenic | 45.0% |
| GTTAACAGCAGGACTCCATT+TGG | - | chr7_2:86652314-86652333 | None:intergenic | 45.0% | |
| ATCCAAACCGTCTCCTTCAA+CGG | + | chr7_2:86652341-86652360 | Msa1085740:CDS | 45.0% | |
| ATACGCTTCGATCGTGATCA+TGG | - | chr7_2:86652647-86652666 | None:intergenic | 45.0% | |
| TACCGTTGAAGGAGACGGTT+TGG | - | chr7_2:86652346-86652365 | None:intergenic | 50.0% | |
| GGAAGCTCCTGTACTCTATG+AGG | - | chr7_2:86652904-86652923 | None:intergenic | 50.0% | |
| AGTACAGGAGCTTCCATGTG+TGG | + | chr7_2:86652909-86652928 | Msa1085740:CDS | 50.0% | |
| AGCCGGAGCTATGAATGTGT+TGG | + | chr7_2:86653896-86653915 | Msa1085740:CDS | 50.0% | |
| TACCGTTGAAGGAGACGGTT+TGG | - | chr7_2:86652346-86652365 | None:intergenic | 50.0% | |
| GGAAGCTCCTGTACTCTATG+AGG | - | chr7_2:86652904-86652923 | None:intergenic | 50.0% | |
| AGTACAGGAGCTTCCATGTG+TGG | + | chr7_2:86652909-86652928 | Msa1085740:CDS | 50.0% | |
| AGCCGGAGCTATGAATGTGT+TGG | + | chr7_2:86653896-86653915 | Msa1085740:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 86652112 | 86653944 | 86652112 | ID=Msa1085740;Name=Msa1085740 |
| chr7_2 | mRNA | 86652112 | 86653944 | 86652112 | ID=Msa1085740-mRNA-1;Parent=Msa1085740;Name=Msa1085740-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|4|0|276 |
| chr7_2 | exon | 86652112 | 86652362 | 86652112 | ID=Msa1085740-mRNA-1:exon:23480;Parent=Msa1085740-mRNA-1 |
| chr7_2 | exon | 86652909 | 86653227 | 86652909 | ID=Msa1085740-mRNA-1:exon:23481;Parent=Msa1085740-mRNA-1 |
| chr7_2 | exon | 86653419 | 86653544 | 86653419 | ID=Msa1085740-mRNA-1:exon:23482;Parent=Msa1085740-mRNA-1 |
| chr7_2 | exon | 86653810 | 86653944 | 86653810 | ID=Msa1085740-mRNA-1:exon:23483;Parent=Msa1085740-mRNA-1 |
| chr7_2 | CDS | 86652112 | 86652362 | 86652112 | ID=Msa1085740-mRNA-1:cds;Parent=Msa1085740-mRNA-1 |
| chr7_2 | CDS | 86652909 | 86653227 | 86652909 | ID=Msa1085740-mRNA-1:cds;Parent=Msa1085740-mRNA-1 |
| chr7_2 | CDS | 86653419 | 86653544 | 86653419 | ID=Msa1085740-mRNA-1:cds;Parent=Msa1085740-mRNA-1 |
| chr7_2 | CDS | 86653810 | 86653944 | 86653810 | ID=Msa1085740-mRNA-1:cds;Parent=Msa1085740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
