AlfalfaGEDB | Msa1037770

M. sativa cultivar zhongmu-4 / Msa1037770

KEGG: -
GO: GO:0000902 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009299 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009639 GO:0009653 GO:0009826 GO:0009987 GO:0010114 GO:0010218 GO:0010467 GO:0016043 GO:0016049 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0032502 GO:0032774 GO:0032989 GO:0034641 GO:0034645 GO:0034654 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0060560 GO:0071704 GO:0071840 GO:0090304 GO:0090698 GO:0097659 GO:1901360 GO:1901362 GO:1901576
PFAM: PF04852.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1037770	XP_013450572.1	94.783	115	5	1	1	114	55	169	8.20e-76	231

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1037770	sp\|Q9FGH2\|LSH5_ARATH	68.750	112	30	3	2	109	47	157	1.66e-48	155

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1037770	I3T2Z0	94.783	115	5	1	1	114	55	169	3.92e-76	231

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006980	Msa1037770	0.815626	8.395838e-52	-8.615850e-47
Msa0055450	Msa1037770	0.809382	1.945366e-50	-8.615850e-47
Msa0080990	Msa1037770	0.805588	1.241732e-49	-8.615850e-47
Msa0669840	Msa1037770	0.845033	5.225073e-59	-8.615850e-47
Msa0739580	Msa1037770	0.858419	8.347457e-63	-8.615850e-47
Msa0748000	Msa1037770	0.804039	2.614934e-49	-8.615850e-47
Msa0770290	Msa1037770	0.827038	1.950459e-54	-8.615850e-47
Msa0782360	Msa1037770	0.829251	5.714976e-55	-8.615850e-47
Msa0124130	Msa1037770	0.820952	5.226742e-53	-8.615850e-47
Msa0149140	Msa1037770	0.810997	8.724037e-51	-8.615850e-47
Msa0156250	Msa1037770	0.819791	9.649698e-53	-8.615850e-47
Msa0185490	Msa1037770	0.802208	6.256178e-49	-8.615850e-47
Msa0197100	Msa1037770	0.803405	3.541159e-49	-8.615850e-47
Msa0212150	Msa1037770	0.844142	9.076514e-59	-8.615850e-47
Msa0375680	Msa1037770	0.812143	4.917145e-51	-8.615850e-47
Msa0406000	Msa1037770	0.852611	4.120891e-61	-8.615850e-47
Msa0424330	Msa1037770	0.857047	2.130182e-62	-8.615850e-47
Msa0424340	Msa1037770	0.834682	2.602379e-56	-8.615850e-47
Msa0451400	Msa1037770	0.861734	8.330881e-64	-8.615850e-47
Msa0999300	Msa1037770	0.846652	1.898122e-59	-8.615850e-47
Msa1001890	Msa1037770	0.813098	3.039049e-51	-8.615850e-47
Msa1037770	Msa1037890	0.843951	1.021243e-58	-8.615850e-47
Msa1037770	Msa1037900	0.819327	1.231073e-52	-8.615850e-47
Msa1037770	Msa1176160	0.811752	5.982299e-51	-8.615850e-47
Msa1037770	Msa1201160	0.831428	1.678365e-55	-8.615850e-47
Msa1037770	Msa1228190	0.825775	3.899961e-54	-8.615850e-47
Msa1037770	Msa1232730	0.822026	2.951652e-53	-8.615850e-47
Msa1037770	Msa1277400	0.804356	2.246916e-49	-8.615850e-47
Msa1037770	Msa1294290	0.818026	2.428941e-52	-8.615850e-47
Msa1037770	Msa1305310	0.800471	1.419058e-48	-8.615850e-47
Msa1037770	Msa1305510	0.815498	8.966760e-52	-8.615850e-47
Msa1037770	Msa1307190	0.801634	8.206628e-49	-8.615850e-47
Msa1037770	Msa1379970	0.845854	3.131385e-59	-8.615850e-47
Msa1037770	Msa1394890	0.816841	4.490776e-52	-8.615850e-47
Msa1037770	Msa1406780	0.869850	2.272551e-66	-8.615850e-47
Msa1037770	Msa1421550	0.825130	5.544053e-54	-8.615850e-47
Msa1037770	Msa1423460	0.804581	2.016396e-49	-8.615850e-47
Msa1037770	Msa1431850	0.874920	4.632075e-68	-8.615850e-47
Msa1037770	Msa1437710	0.814280	1.669215e-51	-8.615850e-47
Msa1037770	Msa1449940	0.822501	2.290415e-53	-8.615850e-47
Msa1037770	Msa1455320	0.849316	3.496384e-60	-8.615850e-47
Msa1037770	Msa1459530	0.804985	1.660785e-49	-8.615850e-47
Msa0239030	Msa1037770	0.808037	3.771082e-50	-8.615850e-47
Msa0252770	Msa1037770	0.853584	2.170045e-61	-8.615850e-47
Msa0289920	Msa1037770	0.854384	1.276138e-61	-8.615850e-47
Msa0306120	Msa1037770	0.832152	1.112504e-55	-8.615850e-47
Msa0329620	Msa1037770	0.863656	2.130640e-64	-8.615850e-47
Msa0359250	Msa1037770	0.860963	1.431010e-63	-8.615850e-47
Msa0492190	Msa1037770	0.835036	2.120193e-56	-8.615850e-47
Msa0515950	Msa1037770	0.846566	2.003568e-59	-8.615850e-47
Msa0591790	Msa1037770	0.822720	2.037219e-53	-8.615850e-47
Msa0594090	Msa1037770	0.832764	7.848074e-56	-8.615850e-47
Msa0849280	Msa1037770	0.816772	4.653526e-52	-8.615850e-47
Msa0851020	Msa1037770	0.831940	1.254996e-55	-8.615850e-47
Msa0860280	Msa1037770	0.850531	1.598849e-60	-8.615850e-47
Msa0867350	Msa1037770	0.816450	5.494775e-52	-8.615850e-47
Msa0898730	Msa1037770	0.823763	1.162885e-53	-8.615850e-47
Msa0929870	Msa1037770	0.806257	8.978990e-50	-8.615850e-47
Msa0944760	Msa1037770	0.800213	1.601680e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1037770	MtrunA17_Chr7g0274631	94.783	115	5	1	1	114	55	169	7.54e-80	231
Msa1037770	MtrunA17_Chr5g0431211	71.296	108	25	3	1	104	64	169	4.00e-50	158
Msa1037770	MtrunA17_Chr2g0283861	72.449	98	22	2	2	96	63	158	1.00e-46	148
Msa1037770	MtrunA17_Chr1g0167411	70.707	99	24	2	2	97	93	189	1.29e-46	149
Msa1037770	MtrunA17_Chr4g0051251	66.972	109	30	3	2	106	74	180	1.46e-46	149
Msa1037770	MtrunA17_Chr2g0325831	62.609	115	38	2	2	113	51	163	2.17e-45	144
Msa1037770	MtrunA17_Chr4g0041141	66.327	98	28	2	2	96	57	152	2.46e-44	142
Msa1037770	MtrunA17_Chr2g0315791	67.347	98	27	2	2	96	61	156	1.33e-43	140
Msa1037770	MtrunA17_Chr1g0190231	71.795	117	28	2	1	114	67	181	1.35e-43	140
Msa1037770	MtrunA17_Chr7g0261381	72.115	104	24	2	2	102	92	193	7.83e-42	137
Msa1037770	MtrunA17_Chr1g0183761	72.115	104	24	2	2	102	73	174	1.06e-41	136
Msa1037770	MtrunA17_Chr1g0187671	71.154	104	25	2	2	102	81	182	5.05e-41	134
Msa1037770	MtrunA17_Chr3g0105921	67.241	116	32	3	2	113	70	183	3.56e-40	133
Msa1037770	MtrunA17_Chr8g0379061	69.388	98	25	2	2	96	113	208	8.80e-34	117

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1037770	AT5G58500.1	68.750	112	30	3	2	109	47	157	1.69e-49	155
Msa1037770	AT1G07090.1	62.832	113	37	2	2	111	59	169	2.96e-47	150
Msa1037770	AT5G28490.1	74.766	107	22	2	2	105	53	157	3.04e-44	142
Msa1037770	AT2G42610.1	67.347	98	27	2	2	96	53	148	7.69e-44	141
Msa1037770	AT2G42610.2	67.347	98	27	2	2	96	53	148	7.69e-44	141
Msa1037770	AT4G18610.1	66.667	96	26	2	5	96	68	161	8.32e-43	139
Msa1037770	AT3G04510.1	68.468	111	30	2	2	109	61	169	9.15e-42	136
Msa1037770	AT2G31160.1	73.585	106	22	3	2	103	82	185	2.80e-40	133
Msa1037770	AT1G16910.1	59.223	103	37	2	2	101	51	151	1.01e-38	127
Msa1037770	AT3G23290.2	75.510	98	19	2	2	96	76	171	2.32e-38	127
Msa1037770	AT1G78815.1	61.224	98	33	2	2	96	68	163	3.16e-37	125

Find 66 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTCACTACCTTGATCAATT+TGG	0.137888	7_1:-74494761	Msa1037770:CDS
TGTTCCAATCTCTCCTCTTT+TGG	0.205312	7_1:+74494864	None:intergenic
AATCCAACTTGTCCTTTCTT+TGG	0.215866	7_1:-74494722	Msa1037770:CDS
GAAGTATTGAAGAGAGAAAT+AGG	0.257550	7_1:+74496200	None:intergenic
AATGTCACATTTCTCCTGTT+TGG	0.288119	7_1:+74496228	None:intergenic
GTTTGGGAGACCGAAGAAAT+AGG	0.293749	7_1:+74496245	None:intergenic
ATGTCACATTTCTCCTGTTT+GGG	0.318773	7_1:+74496229	None:intergenic
ATCCAACTTGTCCTTTCTTT+GGG	0.324334	7_1:-74494721	Msa1037770:CDS
TTCACTACCTTGATCAATTT+GGG	0.326576	7_1:-74494760	Msa1037770:CDS
GTCGATGGTTTCTTAAATAC+TGG	0.330003	7_1:+74494834	None:intergenic
ATGCAATTGCTTGCTGGAAA+TGG	0.366117	7_1:+74495985	None:intergenic
AAAGAGAGTAACACTGTGTT+TGG	0.391846	7_1:+74496155	None:intergenic
CATGGTGGAAGTAACCCTTT+TGG	0.395005	7_1:-74494596	Msa1037770:CDS
GCCTCTCTCCCCTATTTCTT+CGG	0.407860	7_1:-74496255	None:intergenic
TTTGGGAGACCGAAGAAATA+GGG	0.409887	7_1:+74496246	None:intergenic
ATTTCTTCGGTCTCCCAAAC+AGG	0.410878	7_1:-74496242	Msa1037770:five_prime_UTR
GCACATGGAGATGGAGGGTT+TGG	0.411549	7_1:+74494695	None:intergenic
GATGCAATGCAATTGCTTGC+TGG	0.436204	7_1:+74495979	None:intergenic
AGAGCCAAAAGAGGAGAGAT+TGG	0.437889	7_1:-74494868	Msa1037770:five_prime_UTR
CACTTCCATTGTAGCTGCTA+GGG	0.441671	7_1:+74494924	None:intergenic
TTGTCCTCTCCGTCAGGCGT+GGG	0.455000	7_1:-74494672	Msa1037770:CDS
ATGTGCTTGTCCTCTCCGTC+AGG	0.459665	7_1:-74494678	Msa1037770:CDS
TGATCAATTTGGGAAGACTA+AGG	0.465045	7_1:-74494750	Msa1037770:CDS
CTAACAGCACCGTCACCAAA+AGG	0.465453	7_1:+74494581	None:intergenic
GTGGTGGCAACAAGATCAAC+AGG	0.470799	7_1:-74494895	Msa1037770:five_prime_UTR
CTTGTCCTCTCCGTCAGGCG+TGG	0.483822	7_1:-74494673	Msa1037770:CDS
ATCGATCGTAGGTAAATTGT+TGG	0.484092	7_1:+74495954	None:intergenic
GAGTTAGCTACCATAAGAAA+AGG	0.502671	7_1:-74494514	Msa1037770:CDS
TAGTCTTCCCAAATTGATCA+AGG	0.503689	7_1:+74494753	None:intergenic
GTAGTTGTGATGTTGCGGTT+AGG	0.525638	7_1:+74494485	None:intergenic
GCTTATGATCAAGAGATTCA+TGG	0.527780	7_1:-74494614	Msa1037770:CDS
ATTGAAGCAGAAAGTGGTAC+TGG	0.535622	7_1:+74494812	None:intergenic
TCACTTCCATTGTAGCTGCT+AGG	0.535763	7_1:+74494923	None:intergenic
CAAGGCTACCCCACGCCTGA+CGG	0.545353	7_1:+74494663	None:intergenic
CTTTCTGCTTCAATGTGCAA+TGG	0.545802	7_1:-74494803	Msa1037770:exon
AGAGGACAAGCACATGGAGA+TGG	0.557220	7_1:+74494686	None:intergenic
CAAATTGATCAAGGTAGTGA+AGG	0.557585	7_1:+74494762	None:intergenic
GATGGGAAGTGAAGTGAAGT+GGG	0.560664	7_1:+74496101	None:intergenic
GGGTTTGGCATCCCAAAGAA+AGG	0.560750	7_1:+74494710	None:intergenic
ACAAACCCTAGCAGCTACAA+TGG	0.562580	7_1:-74494929	Msa1037770:five_prime_UTR
TTGTTCCGTCGATCGATCGT+AGG	0.563939	7_1:+74495943	None:intergenic
TTGCACATTGAAGCAGAAAG+TGG	0.564133	7_1:+74494806	None:intergenic
GGTAGCCTTGATGCTCTCAT+CGG	0.565716	7_1:-74494650	Msa1037770:CDS
TAACAGCACCGTCACCAAAA+GGG	0.567030	7_1:+74494582	None:intergenic
CATGACAAATAGAAATCAAG+AGG	0.576026	7_1:+74494454	None:intergenic
TGTCCTCTCCGTCAGGCGTG+GGG	0.576278	7_1:-74494671	Msa1037770:CDS
ATTGAGTAGTTGTGATGTTG+CGG	0.576814	7_1:+74494480	None:intergenic
GGACAAGCACATGGAGATGG+AGG	0.578694	7_1:+74494689	None:intergenic
AATATTGTGACTGTGAGTGA+TGG	0.579453	7_1:+74496083	None:intergenic
GCCTTGATGCTCTCATCGGT+CGG	0.581742	7_1:-74494646	Msa1037770:CDS
ATCCCAAAGAAAGGACAAGT+TGG	0.587746	7_1:+74494719	None:intergenic
CAGAAAGTGGTACTGGTCGA+TGG	0.588396	7_1:+74494819	None:intergenic
TCGATCGACGGAACAAACAA+AGG	0.598183	7_1:-74495936	Msa1037770:intron
TGATGGGAAGTGAAGTGAAG+TGG	0.601183	7_1:+74496100	None:intergenic
CTACCCCACGCCTGACGGAG+AGG	0.603590	7_1:+74494668	None:intergenic
ACAGGTACGAGAGCCAAAAG+AGG	0.613687	7_1:-74494877	Msa1037770:five_prime_UTR
TTGGGAGACCGAAGAAATAG+GGG	0.622112	7_1:+74496247	None:intergenic
ATATTGTGACTGTGAGTGAT+GGG	0.622585	7_1:+74496084	None:intergenic
TGACGGAGAGGACAAGCACA+TGG	0.624357	7_1:+74494680	None:intergenic
AATGGAAGTGATTCAAGTGG+TGG	0.625867	7_1:-74494911	Msa1037770:five_prime_UTR
ATTTACCTACGATCGATCGA+CGG	0.637387	7_1:-74495948	Msa1037770:five_prime_UTR
GCCGACCGATGAGAGCATCA+AGG	0.637841	7_1:+74494645	None:intergenic
GACAAGCACATGGAGATGGA+GGG	0.652537	7_1:+74494690	None:intergenic
TACAATGGAAGTGATTCAAG+TGG	0.673612	7_1:-74494914	Msa1037770:five_prime_UTR
TATGATCAAGAGATTCATGG+TGG	0.715975	7_1:-74494611	Msa1037770:CDS
TCTCTTGATCATAAGCCGCG+CGG	0.776146	7_1:+74494621	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAAAAAAATGTAATGAA+CGG	+	chr7_1:74495039-74495058	None:intergenic	10.0%
!!!	TTTTCAAAATTTATAACAAA+CGG	+	chr7_1:74495091-74495110	None:intergenic	10.0%
!!	AATCACTAAAAAAAATATTT+AGG	+	chr7_1:74495324-74495343	None:intergenic	10.0%
!!	AAAAAAAAAAATGTAATGAA+CGG	+	chr7_1:74495039-74495058	None:intergenic	10.0%
!!!	TTTTCAAAATTTATAACAAA+CGG	+	chr7_1:74495091-74495110	None:intergenic	10.0%
!!	AATCACTAAAAAAAATATTT+AGG	+	chr7_1:74495324-74495343	None:intergenic	10.0%
!!	CTCTAAATAAATAGTATAAA+TGG	+	chr7_1:74494997-74495016	None:intergenic	15.0%
!!	AAAAAAAAAATGTAATGAAC+GGG	+	chr7_1:74495038-74495057	None:intergenic	15.0%
!!!	GCATAATCATTTTTATAATA+TGG	-	chr7_1:74495298-74495317	Msa1037770:intron	15.0%
!!!	ATTTCTTTAGATTTTAGAAA+TGG	-	chr7_1:74495519-74495538	Msa1037770:intron	15.0%
!!	TTGAATTTGAATATTAAACA+AGG	-	chr7_1:74495711-74495730	Msa1037770:intron	15.0%
!!	TGAATTTGAATATTAAACAA+GGG	-	chr7_1:74495712-74495731	Msa1037770:intron	15.0%
!!	CTCTAAATAAATAGTATAAA+TGG	+	chr7_1:74494997-74495016	None:intergenic	15.0%
!!	AAAAAAAAAATGTAATGAAC+GGG	+	chr7_1:74495038-74495057	None:intergenic	15.0%
!!!	GCATAATCATTTTTATAATA+TGG	-	chr7_1:74495298-74495317	Msa1037770:intron	15.0%
!!!	ATTTCTTTAGATTTTAGAAA+TGG	-	chr7_1:74495519-74495538	Msa1037770:intron	15.0%
!!	TTGAATTTGAATATTAAACA+AGG	-	chr7_1:74495711-74495730	Msa1037770:intron	15.0%
!!	TGAATTTGAATATTAAACAA+GGG	-	chr7_1:74495712-74495731	Msa1037770:intron	15.0%
!!!	TAGTCTAAAATAAGCTAAAT+TGG	-	chr7_1:74495114-74495133	Msa1037770:intron	20.0%
!!!	TGATTTGCATTTGTATAAAA+CGG	+	chr7_1:74495488-74495507	None:intergenic	20.0%
!!!	TAGTCTAAAATAAGCTAAAT+TGG	-	chr7_1:74495114-74495133	Msa1037770:intron	20.0%
!!!	TGATTTGCATTTGTATAAAA+CGG	+	chr7_1:74495488-74495507	None:intergenic	20.0%
!	AGTTAAAGAAAATGAAGAGA+GGG	+	chr7_1:74494811-74494830	None:intergenic	25.0%
!	TAGTTAAAGAAAATGAAGAG+AGG	+	chr7_1:74494812-74494831	None:intergenic	25.0%
!!	TCTTTTCAAACTAACACTTA+CGG	+	chr7_1:74495445-74495464	None:intergenic	25.0%
!	TCACGATTATACAAGAAATA+TGG	-	chr7_1:74495744-74495763	Msa1037770:intron	25.0%
!	TTATACAAGAAATATGGCAT+TGG	-	chr7_1:74495750-74495769	Msa1037770:intron	25.0%
!	AGTTAAAGAAAATGAAGAGA+GGG	+	chr7_1:74494811-74494830	None:intergenic	25.0%
!	TAGTTAAAGAAAATGAAGAG+AGG	+	chr7_1:74494812-74494831	None:intergenic	25.0%
!!	TCTTTTCAAACTAACACTTA+CGG	+	chr7_1:74495445-74495464	None:intergenic	25.0%
!	TCACGATTATACAAGAAATA+TGG	-	chr7_1:74495744-74495763	Msa1037770:intron	25.0%
!	TTATACAAGAAATATGGCAT+TGG	-	chr7_1:74495750-74495769	Msa1037770:intron	25.0%
!!	GAAGTATTGAAGAGAGAAAT+AGG	+	chr7_1:74494519-74494538	None:intergenic	30.0%
!!!	ACTTTGTTTGCGTTTTTTTG+TGG	-	chr7_1:74494665-74494684	Msa1037770:CDS	30.0%
!!	TAGTTCTAGCTACAAAAAAG+TGG	-	chr7_1:74494921-74494940	Msa1037770:five_prime_UTR	30.0%
	CACATAACTTGAAATTTGGT+TGG	+	chr7_1:74495568-74495587	None:intergenic	30.0%
	CACTCACATAACTTGAAATT+TGG	+	chr7_1:74495572-74495591	None:intergenic	30.0%
	CTTGTATAATCGTGAGATTA+CGG	+	chr7_1:74495739-74495758	None:intergenic	30.0%
	TTCACTACCTTGATCAATTT+GGG	-	chr7_1:74495956-74495975	Msa1037770:five_prime_UTR	30.0%
!!	GAAGTATTGAAGAGAGAAAT+AGG	+	chr7_1:74494519-74494538	None:intergenic	30.0%
!!!	ACTTTGTTTGCGTTTTTTTG+TGG	-	chr7_1:74494665-74494684	Msa1037770:CDS	30.0%
!!	TAGTTCTAGCTACAAAAAAG+TGG	-	chr7_1:74494921-74494940	Msa1037770:five_prime_UTR	30.0%
	CACATAACTTGAAATTTGGT+TGG	+	chr7_1:74495568-74495587	None:intergenic	30.0%
	CACTCACATAACTTGAAATT+TGG	+	chr7_1:74495572-74495591	None:intergenic	30.0%
	CTTGTATAATCGTGAGATTA+CGG	+	chr7_1:74495739-74495758	None:intergenic	30.0%
	TTCACTACCTTGATCAATTT+GGG	-	chr7_1:74495956-74495975	Msa1037770:five_prime_UTR	30.0%
	ATGTCACATTTCTCCTGTTT+GGG	+	chr7_1:74494490-74494509	None:intergenic	35.0%
	AATGTCACATTTCTCCTGTT+TGG	+	chr7_1:74494491-74494510	None:intergenic	35.0%
	AAAGAGAGTAACACTGTGTT+TGG	+	chr7_1:74494564-74494583	None:intergenic	35.0%
	ATATTGTGACTGTGAGTGAT+GGG	+	chr7_1:74494635-74494654	None:intergenic	35.0%
	AATATTGTGACTGTGAGTGA+TGG	+	chr7_1:74494636-74494655	None:intergenic	35.0%
	ATCGATCGTAGGTAAATTGT+TGG	+	chr7_1:74494765-74494784	None:intergenic	35.0%
	AAACAAGAAAGAACAGTGCA+TGG	+	chr7_1:74494901-74494920	None:intergenic	35.0%
	TCTTCTGTTGTGAATTGCTA+GGG	+	chr7_1:74494951-74494970	None:intergenic	35.0%
	TTCTTCTGTTGTGAATTGCT+AGG	+	chr7_1:74494952-74494971	None:intergenic	35.0%
	ACAACAGAAGAACGTATACT+AGG	-	chr7_1:74494960-74494979	Msa1037770:intron	35.0%
	TACAATGGAAGTGATTCAAG+TGG	-	chr7_1:74495802-74495821	Msa1037770:intron	35.0%
	GTCGATGGTTTCTTAAATAC+TGG	+	chr7_1:74495885-74495904	None:intergenic	35.0%
	CAAATTGATCAAGGTAGTGA+AGG	+	chr7_1:74495957-74495976	None:intergenic	35.0%
	CTTCACTACCTTGATCAATT+TGG	-	chr7_1:74495955-74495974	Msa1037770:five_prime_UTR	35.0%
	TAGTCTTCCCAAATTGATCA+AGG	+	chr7_1:74495966-74495985	None:intergenic	35.0%
	TGATCAATTTGGGAAGACTA+AGG	-	chr7_1:74495966-74495985	Msa1037770:five_prime_UTR	35.0%
	AATCCAACTTGTCCTTTCTT+TGG	-	chr7_1:74495994-74496013	Msa1037770:five_prime_UTR	35.0%
	ATCCAACTTGTCCTTTCTTT+GGG	-	chr7_1:74495995-74496014	Msa1037770:five_prime_UTR	35.0%
	GCTTATGATCAAGAGATTCA+TGG	-	chr7_1:74496102-74496121	Msa1037770:five_prime_UTR	35.0%
	TATGATCAAGAGATTCATGG+TGG	-	chr7_1:74496105-74496124	Msa1037770:five_prime_UTR	35.0%
!	TGTTCGTGATTTTCAGTCAA+AGG	-	chr7_1:74496173-74496192	Msa1037770:five_prime_UTR	35.0%
	GAGTTAGCTACCATAAGAAA+AGG	-	chr7_1:74496202-74496221	Msa1037770:five_prime_UTR	35.0%
!	TAGGTCTCTTCCTTTTCTTA+TGG	+	chr7_1:74496215-74496234	None:intergenic	35.0%
	ATTGAGTAGTTGTGATGTTG+CGG	+	chr7_1:74496239-74496258	None:intergenic	35.0%
	ATGTCACATTTCTCCTGTTT+GGG	+	chr7_1:74494490-74494509	None:intergenic	35.0%
	AATGTCACATTTCTCCTGTT+TGG	+	chr7_1:74494491-74494510	None:intergenic	35.0%
	AAAGAGAGTAACACTGTGTT+TGG	+	chr7_1:74494564-74494583	None:intergenic	35.0%
	ATATTGTGACTGTGAGTGAT+GGG	+	chr7_1:74494635-74494654	None:intergenic	35.0%
	AATATTGTGACTGTGAGTGA+TGG	+	chr7_1:74494636-74494655	None:intergenic	35.0%
	ATCGATCGTAGGTAAATTGT+TGG	+	chr7_1:74494765-74494784	None:intergenic	35.0%
	AAACAAGAAAGAACAGTGCA+TGG	+	chr7_1:74494901-74494920	None:intergenic	35.0%
	TCTTCTGTTGTGAATTGCTA+GGG	+	chr7_1:74494951-74494970	None:intergenic	35.0%
	TTCTTCTGTTGTGAATTGCT+AGG	+	chr7_1:74494952-74494971	None:intergenic	35.0%
	ACAACAGAAGAACGTATACT+AGG	-	chr7_1:74494960-74494979	Msa1037770:intron	35.0%
	TACAATGGAAGTGATTCAAG+TGG	-	chr7_1:74495802-74495821	Msa1037770:intron	35.0%
	GTCGATGGTTTCTTAAATAC+TGG	+	chr7_1:74495885-74495904	None:intergenic	35.0%
	CAAATTGATCAAGGTAGTGA+AGG	+	chr7_1:74495957-74495976	None:intergenic	35.0%
	CTTCACTACCTTGATCAATT+TGG	-	chr7_1:74495955-74495974	Msa1037770:five_prime_UTR	35.0%
	TAGTCTTCCCAAATTGATCA+AGG	+	chr7_1:74495966-74495985	None:intergenic	35.0%
	TGATCAATTTGGGAAGACTA+AGG	-	chr7_1:74495966-74495985	Msa1037770:five_prime_UTR	35.0%
	AATCCAACTTGTCCTTTCTT+TGG	-	chr7_1:74495994-74496013	Msa1037770:five_prime_UTR	35.0%
	ATCCAACTTGTCCTTTCTTT+GGG	-	chr7_1:74495995-74496014	Msa1037770:five_prime_UTR	35.0%
	GCTTATGATCAAGAGATTCA+TGG	-	chr7_1:74496102-74496121	Msa1037770:five_prime_UTR	35.0%
	TATGATCAAGAGATTCATGG+TGG	-	chr7_1:74496105-74496124	Msa1037770:five_prime_UTR	35.0%
!	TGTTCGTGATTTTCAGTCAA+AGG	-	chr7_1:74496173-74496192	Msa1037770:five_prime_UTR	35.0%
	GAGTTAGCTACCATAAGAAA+AGG	-	chr7_1:74496202-74496221	Msa1037770:five_prime_UTR	35.0%
!	TAGGTCTCTTCCTTTTCTTA+TGG	+	chr7_1:74496215-74496234	None:intergenic	35.0%
	ATTGAGTAGTTGTGATGTTG+CGG	+	chr7_1:74496239-74496258	None:intergenic	35.0%
	TTTGGGAGACCGAAGAAATA+GGG	+	chr7_1:74494473-74494492	None:intergenic	40.0%
!	ATGCAATTGCTTGCTGGAAA+TGG	+	chr7_1:74494734-74494753	None:intergenic	40.0%
	ATTTACCTACGATCGATCGA+CGG	-	chr7_1:74494768-74494787	Msa1037770:CDS	40.0%
!	AAATGGCATGCTCTAGATGA+TGG	-	chr7_1:74495536-74495555	Msa1037770:intron	40.0%
!	AATGGCATGCTCTAGATGAT+GGG	-	chr7_1:74495537-74495556	Msa1037770:intron	40.0%
	AATGGAAGTGATTCAAGTGG+TGG	-	chr7_1:74495805-74495824	Msa1037770:intron	40.0%
!	TGTTCCAATCTCTCCTCTTT+TGG	+	chr7_1:74495855-74495874	None:intergenic	40.0%
	ATTGAAGCAGAAAGTGGTAC+TGG	+	chr7_1:74495907-74495926	None:intergenic	40.0%
	TTGCACATTGAAGCAGAAAG+TGG	+	chr7_1:74495913-74495932	None:intergenic	40.0%
	CTTTCTGCTTCAATGTGCAA+TGG	-	chr7_1:74495913-74495932	Msa1037770:intron	40.0%
	ATCCCAAAGAAAGGACAAGT+TGG	+	chr7_1:74496000-74496019	None:intergenic	40.0%
!	GATTTTCAGTCAAAGGCTAG+AGG	-	chr7_1:74496180-74496199	Msa1037770:five_prime_UTR	40.0%
	TTTGGGAGACCGAAGAAATA+GGG	+	chr7_1:74494473-74494492	None:intergenic	40.0%
!	ATGCAATTGCTTGCTGGAAA+TGG	+	chr7_1:74494734-74494753	None:intergenic	40.0%
	ATTTACCTACGATCGATCGA+CGG	-	chr7_1:74494768-74494787	Msa1037770:CDS	40.0%
!	AAATGGCATGCTCTAGATGA+TGG	-	chr7_1:74495536-74495555	Msa1037770:intron	40.0%
!	AATGGCATGCTCTAGATGAT+GGG	-	chr7_1:74495537-74495556	Msa1037770:intron	40.0%
	AATGGAAGTGATTCAAGTGG+TGG	-	chr7_1:74495805-74495824	Msa1037770:intron	40.0%
!	TGTTCCAATCTCTCCTCTTT+TGG	+	chr7_1:74495855-74495874	None:intergenic	40.0%
	ATTGAAGCAGAAAGTGGTAC+TGG	+	chr7_1:74495907-74495926	None:intergenic	40.0%
	TTGCACATTGAAGCAGAAAG+TGG	+	chr7_1:74495913-74495932	None:intergenic	40.0%
	CTTTCTGCTTCAATGTGCAA+TGG	-	chr7_1:74495913-74495932	Msa1037770:intron	40.0%
	ATCCCAAAGAAAGGACAAGT+TGG	+	chr7_1:74496000-74496019	None:intergenic	40.0%
!	GATTTTCAGTCAAAGGCTAG+AGG	-	chr7_1:74496180-74496199	Msa1037770:five_prime_UTR	40.0%
	TTGGGAGACCGAAGAAATAG+GGG	+	chr7_1:74494472-74494491	None:intergenic	45.0%
	GTTTGGGAGACCGAAGAAAT+AGG	+	chr7_1:74494474-74494493	None:intergenic	45.0%
	ATTTCTTCGGTCTCCCAAAC+AGG	-	chr7_1:74494474-74494493	Msa1037770:CDS	45.0%
	GATGGGAAGTGAAGTGAAGT+GGG	+	chr7_1:74494618-74494637	None:intergenic	45.0%
	TGATGGGAAGTGAAGTGAAG+TGG	+	chr7_1:74494619-74494638	None:intergenic	45.0%
	GATGCAATGCAATTGCTTGC+TGG	+	chr7_1:74494740-74494759	None:intergenic	45.0%
	TCGATCGACGGAACAAACAA+AGG	-	chr7_1:74494780-74494799	Msa1037770:CDS	45.0%
	AGTGCATGGCAAATGAGTGA+GGG	+	chr7_1:74494887-74494906	None:intergenic	45.0%
	ACAAACCCTAGCAGCTACAA+TGG	-	chr7_1:74495787-74495806	Msa1037770:intron	45.0%
	CACTTCCATTGTAGCTGCTA+GGG	+	chr7_1:74495795-74495814	None:intergenic	45.0%
	TCACTTCCATTGTAGCTGCT+AGG	+	chr7_1:74495796-74495815	None:intergenic	45.0%
	AGAGCCAAAAGAGGAGAGAT+TGG	-	chr7_1:74495848-74495867	Msa1037770:intron	45.0%
!!	CATGGTGGAAGTAACCCTTT+TGG	-	chr7_1:74496120-74496139	Msa1037770:five_prime_UTR	45.0%
!	GGAAGTAACCCTTTTGGTGA+CGG	-	chr7_1:74496126-74496145	Msa1037770:five_prime_UTR	45.0%
	TAACAGCACCGTCACCAAAA+GGG	+	chr7_1:74496137-74496156	None:intergenic	45.0%
	GTAGTTGTGATGTTGCGGTT+AGG	+	chr7_1:74496234-74496253	None:intergenic	45.0%
	TTGGGAGACCGAAGAAATAG+GGG	+	chr7_1:74494472-74494491	None:intergenic	45.0%
	GTTTGGGAGACCGAAGAAAT+AGG	+	chr7_1:74494474-74494493	None:intergenic	45.0%
	ATTTCTTCGGTCTCCCAAAC+AGG	-	chr7_1:74494474-74494493	Msa1037770:CDS	45.0%
	GATGGGAAGTGAAGTGAAGT+GGG	+	chr7_1:74494618-74494637	None:intergenic	45.0%
	TGATGGGAAGTGAAGTGAAG+TGG	+	chr7_1:74494619-74494638	None:intergenic	45.0%
	GATGCAATGCAATTGCTTGC+TGG	+	chr7_1:74494740-74494759	None:intergenic	45.0%
	TCGATCGACGGAACAAACAA+AGG	-	chr7_1:74494780-74494799	Msa1037770:CDS	45.0%
	AGTGCATGGCAAATGAGTGA+GGG	+	chr7_1:74494887-74494906	None:intergenic	45.0%
	ACAAACCCTAGCAGCTACAA+TGG	-	chr7_1:74495787-74495806	Msa1037770:intron	45.0%
	CACTTCCATTGTAGCTGCTA+GGG	+	chr7_1:74495795-74495814	None:intergenic	45.0%
	TCACTTCCATTGTAGCTGCT+AGG	+	chr7_1:74495796-74495815	None:intergenic	45.0%
	AGAGCCAAAAGAGGAGAGAT+TGG	-	chr7_1:74495848-74495867	Msa1037770:intron	45.0%
!!	CATGGTGGAAGTAACCCTTT+TGG	-	chr7_1:74496120-74496139	Msa1037770:five_prime_UTR	45.0%
!	GGAAGTAACCCTTTTGGTGA+CGG	-	chr7_1:74496126-74496145	Msa1037770:five_prime_UTR	45.0%
	TAACAGCACCGTCACCAAAA+GGG	+	chr7_1:74496137-74496156	None:intergenic	45.0%
	GTAGTTGTGATGTTGCGGTT+AGG	+	chr7_1:74496234-74496253	None:intergenic	45.0%
	TTGTTCCGTCGATCGATCGT+AGG	+	chr7_1:74494776-74494795	None:intergenic	50.0%
	CAGTGCATGGCAAATGAGTG+AGG	+	chr7_1:74494888-74494907	None:intergenic	50.0%
	GTGGTGGCAACAAGATCAAC+AGG	-	chr7_1:74495821-74495840	Msa1037770:intron	50.0%
	ACAGGTACGAGAGCCAAAAG+AGG	-	chr7_1:74495839-74495858	Msa1037770:intron	50.0%
!!	CAGAAAGTGGTACTGGTCGA+TGG	+	chr7_1:74495900-74495919	None:intergenic	50.0%
	GGGTTTGGCATCCCAAAGAA+AGG	+	chr7_1:74496009-74496028	None:intergenic	50.0%
	GACAAGCACATGGAGATGGA+GGG	+	chr7_1:74496029-74496048	None:intergenic	50.0%
	AGAGGACAAGCACATGGAGA+TGG	+	chr7_1:74496033-74496052	None:intergenic	50.0%
!	GGTAGCCTTGATGCTCTCAT+CGG	-	chr7_1:74496066-74496085	Msa1037770:five_prime_UTR	50.0%
	TCTCTTGATCATAAGCCGCG+CGG	+	chr7_1:74496098-74496117	None:intergenic	50.0%
	CTAACAGCACCGTCACCAAA+AGG	+	chr7_1:74496138-74496157	None:intergenic	50.0%
!!!	CTTTTGGTGACGGTGCTGTT+AGG	-	chr7_1:74496136-74496155	Msa1037770:five_prime_UTR	50.0%
	TTGTTCCGTCGATCGATCGT+AGG	+	chr7_1:74494776-74494795	None:intergenic	50.0%
	CAGTGCATGGCAAATGAGTG+AGG	+	chr7_1:74494888-74494907	None:intergenic	50.0%
	GTGGTGGCAACAAGATCAAC+AGG	-	chr7_1:74495821-74495840	Msa1037770:intron	50.0%
	ACAGGTACGAGAGCCAAAAG+AGG	-	chr7_1:74495839-74495858	Msa1037770:intron	50.0%
!!	CAGAAAGTGGTACTGGTCGA+TGG	+	chr7_1:74495900-74495919	None:intergenic	50.0%
	GGGTTTGGCATCCCAAAGAA+AGG	+	chr7_1:74496009-74496028	None:intergenic	50.0%
	GACAAGCACATGGAGATGGA+GGG	+	chr7_1:74496029-74496048	None:intergenic	50.0%
	AGAGGACAAGCACATGGAGA+TGG	+	chr7_1:74496033-74496052	None:intergenic	50.0%
!	GGTAGCCTTGATGCTCTCAT+CGG	-	chr7_1:74496066-74496085	Msa1037770:five_prime_UTR	50.0%
	TCTCTTGATCATAAGCCGCG+CGG	+	chr7_1:74496098-74496117	None:intergenic	50.0%
	CTAACAGCACCGTCACCAAA+AGG	+	chr7_1:74496138-74496157	None:intergenic	50.0%
!!!	CTTTTGGTGACGGTGCTGTT+AGG	-	chr7_1:74496136-74496155	Msa1037770:five_prime_UTR	50.0%
	GCACATGGAGATGGAGGGTT+TGG	+	chr7_1:74496024-74496043	None:intergenic	55.0%
	GGACAAGCACATGGAGATGG+AGG	+	chr7_1:74496030-74496049	None:intergenic	55.0%
	TGACGGAGAGGACAAGCACA+TGG	+	chr7_1:74496039-74496058	None:intergenic	55.0%
	ATGTGCTTGTCCTCTCCGTC+AGG	-	chr7_1:74496038-74496057	Msa1037770:five_prime_UTR	55.0%
	GCCTTGATGCTCTCATCGGT+CGG	-	chr7_1:74496070-74496089	Msa1037770:five_prime_UTR	55.0%
	GCACATGGAGATGGAGGGTT+TGG	+	chr7_1:74496024-74496043	None:intergenic	55.0%
	GGACAAGCACATGGAGATGG+AGG	+	chr7_1:74496030-74496049	None:intergenic	55.0%
	TGACGGAGAGGACAAGCACA+TGG	+	chr7_1:74496039-74496058	None:intergenic	55.0%
	ATGTGCTTGTCCTCTCCGTC+AGG	-	chr7_1:74496038-74496057	Msa1037770:five_prime_UTR	55.0%
	GCCTTGATGCTCTCATCGGT+CGG	-	chr7_1:74496070-74496089	Msa1037770:five_prime_UTR	55.0%
	TTGTCCTCTCCGTCAGGCGT+GGG	-	chr7_1:74496044-74496063	Msa1037770:five_prime_UTR	60.0%
!!	GCCGACCGATGAGAGCATCA+AGG	+	chr7_1:74496074-74496093	None:intergenic	60.0%
	TTGTCCTCTCCGTCAGGCGT+GGG	-	chr7_1:74496044-74496063	Msa1037770:five_prime_UTR	60.0%
!!	GCCGACCGATGAGAGCATCA+AGG	+	chr7_1:74496074-74496093	None:intergenic	60.0%
	CTTGTCCTCTCCGTCAGGCG+TGG	-	chr7_1:74496043-74496062	Msa1037770:five_prime_UTR	65.0%
	TGTCCTCTCCGTCAGGCGTG+GGG	-	chr7_1:74496045-74496064	Msa1037770:five_prime_UTR	65.0%
	CAAGGCTACCCCACGCCTGA+CGG	+	chr7_1:74496056-74496075	None:intergenic	65.0%
	CTTGTCCTCTCCGTCAGGCG+TGG	-	chr7_1:74496043-74496062	Msa1037770:five_prime_UTR	65.0%
	TGTCCTCTCCGTCAGGCGTG+GGG	-	chr7_1:74496045-74496064	Msa1037770:five_prime_UTR	65.0%
	CAAGGCTACCCCACGCCTGA+CGG	+	chr7_1:74496056-74496075	None:intergenic	65.0%
	CTACCCCACGCCTGACGGAG+AGG	+	chr7_1:74496051-74496070	None:intergenic	70.0%
!	TCTCATCGGTCGGCTCCGCG+CGG	-	chr7_1:74496080-74496099	Msa1037770:five_prime_UTR	70.0%
	CTACCCCACGCCTGACGGAG+AGG	+	chr7_1:74496051-74496070	None:intergenic	70.0%
!	TCTCATCGGTCGGCTCCGCG+CGG	-	chr7_1:74496080-74496099	Msa1037770:five_prime_UTR	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_1	gene	74494469	74496269	74494469	ID=Msa1037770;Name=Msa1037770
chr7_1	mRNA	74494469	74496269	74494469	ID=Msa1037770-mRNA-1;Parent=Msa1037770;Name=Msa1037770-mRNA-1;_AED=0.19;_eAED=0.33;_QI=479\|0\|0.5\|1\|0\|0\|2\|0\|114
chr7_1	exon	74494469	74494959	74494469	ID=Msa1037770-mRNA-1:exon:18796;Parent=Msa1037770-mRNA-1
chr7_1	exon	74495937	74496269	74495937	ID=Msa1037770-mRNA-1:exon:18795;Parent=Msa1037770-mRNA-1
chr7_1	five_prime_UTR	74495937	74496269	74495937	ID=Msa1037770-mRNA-1:five_prime_utr;Parent=Msa1037770-mRNA-1
chr7_1	five_prime_UTR	74494814	74494959	74494814	ID=Msa1037770-mRNA-1:five_prime_utr;Parent=Msa1037770-mRNA-1
chr7_1	CDS	74494469	74494813	74494469	ID=Msa1037770-mRNA-1:cds;Parent=Msa1037770-mRNA-1

Gene Sequence	>Msa1037770 ATGTGCAATGGAACTCATGTTCTTGAATTCCTTCACTACCTTGATCAATTTGGGAAGACTAAGGTTCACAATCCAACTTGTCCTTTCTTTGGGATGCCAAACCCTCCATCTCCATGTGCTTGTCCTCTCCGTCAGGCGTGGGGTAGCCTTGATGCTCTCATCGGTCGGCTCCGCGCGGCTTATGATCAAGAGATTCATGGTGGAAGTAACCCTTTTGGTGACGGTGCTGTTAGGTTTTACTTGCGTGATGTTCGTGATTTTCAGTCAAAGGCTAGAGGAGTTAGCTACCATAAGAAAAGGAAGAGACCTAACCGCAACATCACAACTACTCAATCATCCTCTTGA
Protein sequence	>Msa1037770 MCNGTHVLEFLHYLDQFGKTKVHNPTCPFFGMPNPPSPCACPLRQAWGSLDALIGRLRAAYDQEIHGGSNPFGDGAVRFYLRDVRDFQSKARGVSYHKKRKRPNRNITTTQSSS*