Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944760 | XP_013451580.2 | 96.660 | 479 | 16 | 0 | 1 | 479 | 1 | 479 | 0.0 | 969 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944760 | sp|Q5XEP9|KCS2_ARATH | 56.108 | 483 | 197 | 6 | 2 | 471 | 36 | 516 | 0.0 | 560 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015710 | Msa0944760 | 0.809746 | 1.625156e-50 | -8.615850e-47 |
| Msa0017510 | Msa0944760 | 0.812077 | 5.081835e-51 | -8.615850e-47 |
| Msa0019600 | Msa0944760 | 0.846371 | 2.264903e-59 | -8.615850e-47 |
| Msa0050040 | Msa0944760 | 0.810960 | 8.890101e-51 | -8.615850e-47 |
| Msa0055450 | Msa0944760 | 0.805112 | 1.562068e-49 | -8.615850e-47 |
| Msa0102990 | Msa0944760 | 0.810659 | 1.032775e-50 | -8.615850e-47 |
| Msa0110970 | Msa0944760 | 0.800270 | 1.558976e-48 | -8.615850e-47 |
| Msa0111750 | Msa0944760 | 0.801638 | 8.192098e-49 | -8.615850e-47 |
| Msa0641250 | Msa0944760 | 0.839500 | 1.526973e-57 | -8.615850e-47 |
| Msa0669840 | Msa0944760 | 0.858751 | 6.644621e-63 | -8.615850e-47 |
| Msa0680150 | Msa0944760 | 0.801672 | 8.063747e-49 | -8.615850e-47 |
| Msa0739580 | Msa0944760 | 0.855565 | 5.791994e-62 | -8.615850e-47 |
| Msa0751890 | Msa0944760 | 0.805336 | 1.402269e-49 | -8.615850e-47 |
| Msa0764820 | Msa0944760 | 0.810210 | 1.290722e-50 | -8.615850e-47 |
| Msa0770290 | Msa0944760 | 0.815035 | 1.136339e-51 | -8.615850e-47 |
| Msa0782360 | Msa0944760 | 0.826916 | 2.086635e-54 | -8.615850e-47 |
| Msa0828830 | Msa0944760 | 0.816069 | 6.688601e-52 | -8.615850e-47 |
| Msa0831940 | Msa0944760 | 0.800313 | 1.528098e-48 | -8.615850e-47 |
| Msa0124130 | Msa0944760 | 0.827194 | 1.789884e-54 | -8.615850e-47 |
| Msa0141120 | Msa0944760 | 0.843539 | 1.316663e-58 | -8.615850e-47 |
| Msa0149140 | Msa0944760 | 0.825092 | 5.658325e-54 | -8.615850e-47 |
| Msa0156250 | Msa0944760 | 0.839661 | 1.386240e-57 | -8.615850e-47 |
| Msa0157290 | Msa0944760 | 0.812996 | 3.199936e-51 | -8.615850e-47 |
| Msa0158600 | Msa0944760 | 0.807734 | 4.373406e-50 | -8.615850e-47 |
| Msa0185490 | Msa0944760 | 0.992657 | 1.268500e-194 | -8.615850e-47 |
| Msa0197100 | Msa0944760 | 0.831371 | 1.733670e-55 | -8.615850e-47 |
| Msa0197930 | Msa0944760 | 0.816775 | 4.646871e-52 | -8.615850e-47 |
| Msa0203030 | Msa0944760 | 0.800151 | 1.648980e-48 | -8.615850e-47 |
| Msa0212150 | Msa0944760 | 0.828782 | 7.423444e-55 | -8.615850e-47 |
| Msa0221290 | Msa0944760 | 0.809665 | 1.690882e-50 | -8.615850e-47 |
| Msa0375680 | Msa0944760 | 0.812091 | 5.048317e-51 | -8.615850e-47 |
| Msa0392420 | Msa0944760 | 0.865441 | 5.892008e-65 | -8.615850e-47 |
| Msa0392460 | Msa0944760 | 0.864530 | 1.138180e-64 | -8.615850e-47 |
| Msa0392490 | Msa0944760 | 0.875804 | 2.307494e-68 | -8.615850e-47 |
| Msa0406000 | Msa0944760 | 0.878970 | 1.824239e-69 | -8.615850e-47 |
| Msa0415320 | Msa0944760 | 0.810864 | 9.323845e-51 | -8.615850e-47 |
| Msa0417440 | Msa0944760 | 0.814124 | 1.807547e-51 | -8.615850e-47 |
| Msa0424330 | Msa0944760 | 0.837993 | 3.743320e-57 | -8.615850e-47 |
| Msa0424340 | Msa0944760 | 0.821077 | 4.891042e-53 | -8.615850e-47 |
| Msa0424350 | Msa0944760 | 0.844714 | 6.371025e-59 | -8.615850e-47 |
| Msa0451400 | Msa0944760 | 0.877894 | 4.356285e-69 | -8.615850e-47 |
| Msa0239030 | Msa0944760 | 0.829199 | 5.883168e-55 | -8.615850e-47 |
| Msa0252630 | Msa0944760 | 0.806919 | 6.511853e-50 | -8.615850e-47 |
| Msa0252770 | Msa0944760 | 0.836276 | 1.028600e-56 | -8.615850e-47 |
| Msa0276740 | Msa0944760 | 0.820641 | 6.159852e-53 | -8.615850e-47 |
| Msa0289920 | Msa0944760 | 0.812485 | 4.139882e-51 | -8.615850e-47 |
| Msa0298240 | Msa0944760 | 0.810325 | 1.219280e-50 | -8.615850e-47 |
| Msa0306120 | Msa0944760 | 0.827689 | 1.361572e-54 | -8.615850e-47 |
| Msa0316680 | Msa0944760 | 0.825218 | 5.284978e-54 | -8.615850e-47 |
| Msa0317280 | Msa0944760 | 0.802438 | 5.610379e-49 | -8.615850e-47 |
| Msa0317340 | Msa0944760 | 0.808809 | 2.580877e-50 | -8.615850e-47 |
| Msa0329620 | Msa0944760 | 0.837536 | 4.904332e-57 | -8.615850e-47 |
| Msa0343660 | Msa0944760 | 0.810568 | 1.080576e-50 | -8.615850e-47 |
| Msa0344570 | Msa0944760 | 0.862785 | 3.961274e-64 | -8.615850e-47 |
| Msa0359250 | Msa0944760 | 0.891625 | 3.349625e-74 | -8.615850e-47 |
| Msa0487570 | Msa0944760 | 0.870113 | 1.864048e-66 | -8.615850e-47 |
| Msa0487630 | Msa0944760 | 0.881590 | 2.115163e-70 | -8.615850e-47 |
| Msa0492190 | Msa0944760 | 0.857477 | 1.589090e-62 | -8.615850e-47 |
| Msa0515950 | Msa0944760 | 0.822994 | 1.758707e-53 | -8.615850e-47 |
| Msa0527550 | Msa0944760 | 0.817721 | 2.847786e-52 | -8.615850e-47 |
| Msa0534930 | Msa0944760 | 0.862710 | 4.179567e-64 | -8.615850e-47 |
| Msa0535040 | Msa0944760 | 0.857864 | 1.220703e-62 | -8.615850e-47 |
| Msa0537920 | Msa0944760 | 0.816013 | 6.883245e-52 | -8.615850e-47 |
| Msa0538220 | Msa0944760 | 0.811366 | 7.258253e-51 | -8.615850e-47 |
| Msa0591790 | Msa0944760 | 0.874136 | 8.546892e-68 | -8.615850e-47 |
| Msa0594090 | Msa0944760 | 0.845019 | 5.270996e-59 | -8.615850e-47 |
| Msa0844560 | Msa0944760 | 0.802473 | 5.518035e-49 | -8.615850e-47 |
| Msa0860280 | Msa0944760 | 0.843141 | 1.681396e-58 | -8.615850e-47 |
| Msa0867350 | Msa0944760 | 0.822138 | 2.780604e-53 | -8.615850e-47 |
| Msa0880140 | Msa0944760 | 0.816828 | 4.521800e-52 | -8.615850e-47 |
| Msa0880780 | Msa0944760 | 0.807900 | 4.031578e-50 | -8.615850e-47 |
| Msa0896540 | Msa0944760 | 0.811657 | 6.274958e-51 | -8.615850e-47 |
| Msa0898730 | Msa0944760 | 0.830805 | 2.387785e-55 | -8.615850e-47 |
| Msa0929870 | Msa0944760 | 0.835697 | 1.442959e-56 | -8.615850e-47 |
| Msa0936410 | Msa0944760 | 0.829413 | 5.221410e-55 | -8.615850e-47 |
| Msa0944760 | Msa0944880 | 0.953578 | 2.012318e-111 | -8.615850e-47 |
| Msa0944760 | Msa0961560 | 0.807622 | 4.619333e-50 | -8.615850e-47 |
| Msa0944760 | Msa0973250 | 0.815836 | 7.536603e-52 | -8.615850e-47 |
| Msa0944760 | Msa0979510 | 0.810122 | 1.348566e-50 | -8.615850e-47 |
| Msa0944760 | Msa0999300 | 0.849661 | 2.801968e-60 | -8.615850e-47 |
| Msa0944760 | Msa0999360 | 0.809931 | 1.482498e-50 | -8.615850e-47 |
| Msa0944760 | Msa0999410 | 0.805848 | 1.094684e-49 | -8.615850e-47 |
| Msa0944760 | Msa1001890 | 0.847370 | 1.207021e-59 | -8.615850e-47 |
| Msa0944760 | Msa1016600 | 0.819701 | 1.011526e-52 | -8.615850e-47 |
| Msa0944760 | Msa1037770 | 0.800213 | 1.601680e-48 | -8.615850e-47 |
| Msa0944760 | Msa1037890 | 0.811210 | 7.847290e-51 | -8.615850e-47 |
| Msa0944760 | Msa1037900 | 0.844518 | 7.192764e-59 | -8.615850e-47 |
| Msa0944760 | Msa1037910 | 0.823488 | 1.348100e-53 | -8.615850e-47 |
| Msa0944760 | Msa1041530 | 0.832648 | 8.384314e-56 | -8.615850e-47 |
| Msa0944760 | Msa1081570 | 0.833330 | 5.675460e-56 | -8.615850e-47 |
| Msa0944760 | Msa1084520 | 0.817872 | 2.631666e-52 | -8.615850e-47 |
| Msa0944760 | Msa1125810 | 0.801109 | 1.051198e-48 | -8.615850e-47 |
| Msa0944760 | Msa1127140 | 0.841266 | 5.274285e-58 | -8.615850e-47 |
| Msa0944760 | Msa1129960 | 0.840036 | 1.107218e-57 | -8.615850e-47 |
| Msa0944760 | Msa1129970 | 0.827425 | 1.575736e-54 | -8.615850e-47 |
| Msa0944760 | Msa1130010 | 0.801231 | 9.929122e-49 | -8.615850e-47 |
| Msa0944760 | Msa1145020 | 0.802494 | 5.462451e-49 | -8.615850e-47 |
| Msa0944760 | Msa1166400 | 0.829610 | 4.675111e-55 | -8.615850e-47 |
| Msa0944760 | Msa1169990 | 0.809346 | 1.980639e-50 | -8.615850e-47 |
| Msa0944760 | Msa1201110 | 0.832679 | 8.239210e-56 | -8.615850e-47 |
| Msa0944760 | Msa1201160 | 0.866380 | 2.974669e-65 | -8.615850e-47 |
| Msa0944760 | Msa1218550 | 0.813199 | 2.888817e-51 | -8.615850e-47 |
| Msa0944760 | Msa1228190 | 0.850821 | 1.324853e-60 | -8.615850e-47 |
| Msa0944760 | Msa1271260 | 0.817224 | 3.684682e-52 | -8.615850e-47 |
| Msa0944760 | Msa1294290 | 0.856945 | 2.282822e-62 | -8.615850e-47 |
| Msa0944760 | Msa1305510 | 0.837859 | 4.052250e-57 | -8.615850e-47 |
| Msa0944760 | Msa1374550 | 0.850653 | 1.477471e-60 | -8.615850e-47 |
| Msa0944760 | Msa1379970 | 0.846584 | 1.981100e-59 | -8.615850e-47 |
| Msa0944760 | Msa1394890 | 0.832471 | 9.278386e-56 | -8.615850e-47 |
| Msa0944760 | Msa1406780 | 0.862357 | 5.367287e-64 | -8.615850e-47 |
| Msa0944760 | Msa1420060 | 0.814371 | 1.594232e-51 | -8.615850e-47 |
| Msa0944760 | Msa1421550 | 0.873044 | 1.994829e-67 | -8.615850e-47 |
| Msa0944760 | Msa1423460 | 0.995237 | 2.642247e-214 | -8.615850e-47 |
| Msa0944760 | Msa1430240 | 0.800582 | 1.346977e-48 | -8.615850e-47 |
| Msa0944760 | Msa1431850 | 0.859262 | 4.672654e-63 | -8.615850e-47 |
| Msa0944760 | Msa1436570 | 0.810746 | 9.889873e-51 | -8.615850e-47 |
| Msa0944760 | Msa1437710 | 0.802747 | 4.845544e-49 | -8.615850e-47 |
| Msa0944760 | Msa1449940 | 0.800571 | 1.354068e-48 | -8.615850e-47 |
| Msa0944760 | Msa1455320 | 0.809444 | 1.886998e-50 | -8.615850e-47 |
| Msa0944760 | Msa1459530 | 0.821005 | 5.081851e-53 | -8.615850e-47 |
| Msa0944760 | Msa1461060 | 0.843135 | 1.688161e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944760 | MtrunA17_Chr1g0188051 | 58.650 | 474 | 192 | 2 | 2 | 471 | 34 | 507 | 0.0 | 578 |
| Msa0944760 | MtrunA17_Chr1g0166191 | 58.491 | 477 | 188 | 4 | 2 | 471 | 40 | 513 | 0.0 | 571 |
| Msa0944760 | MtrunA17_Chr4g0063011 | 55.672 | 476 | 203 | 4 | 2 | 471 | 22 | 495 | 0.0 | 545 |
| Msa0944760 | MtrunA17_Chr6g0461631 | 96.958 | 263 | 8 | 0 | 217 | 479 | 3 | 265 | 0.0 | 541 |
| Msa0944760 | MtrunA17_Chr6g0480561 | 56.206 | 427 | 185 | 2 | 43 | 468 | 41 | 466 | 1.84e-175 | 501 |
| Msa0944760 | MtrunA17_Chr7g0276251 | 56.595 | 417 | 178 | 2 | 60 | 473 | 115 | 531 | 2.09e-171 | 493 |
| Msa0944760 | MtrunA17_Chr2g0306781 | 63.562 | 365 | 133 | 0 | 107 | 471 | 36 | 400 | 4.09e-171 | 487 |
| Msa0944760 | MtrunA17_Chr4g0035081 | 51.266 | 474 | 224 | 4 | 2 | 470 | 31 | 502 | 2.18e-170 | 489 |
| Msa0944760 | MtrunA17_Chr1g0209881 | 50.816 | 429 | 209 | 2 | 43 | 471 | 65 | 491 | 6.29e-159 | 459 |
| Msa0944760 | MtrunA17_Chr5g0423521 | 46.809 | 470 | 245 | 4 | 6 | 471 | 23 | 491 | 2.26e-154 | 448 |
| Msa0944760 | MtrunA17_Chr3g0136561 | 51.069 | 421 | 196 | 2 | 60 | 470 | 483 | 903 | 2.52e-154 | 461 |
| Msa0944760 | MtrunA17_Chr6g0461621 | 92.140 | 229 | 18 | 0 | 1 | 229 | 1 | 229 | 9.81e-153 | 434 |
| Msa0944760 | MtrunA17_Chr2g0277841 | 48.786 | 412 | 206 | 4 | 63 | 472 | 45 | 453 | 3.90e-140 | 410 |
| Msa0944760 | MtrunA17_Chr7g0250661 | 63.668 | 289 | 105 | 0 | 183 | 471 | 2 | 290 | 9.41e-140 | 403 |
| Msa0944760 | MtrunA17_Chr2g0295781 | 47.317 | 410 | 212 | 3 | 63 | 470 | 44 | 451 | 4.98e-130 | 384 |
| Msa0944760 | MtrunA17_Chr2g0282281 | 46.517 | 402 | 209 | 3 | 62 | 462 | 107 | 503 | 2.76e-127 | 379 |
| Msa0944760 | MtrunA17_Chr7g0276241 | 56.122 | 294 | 122 | 2 | 183 | 474 | 2 | 290 | 8.27e-119 | 350 |
| Msa0944760 | MtrunA17_Chr1g0204301 | 40.441 | 408 | 242 | 1 | 62 | 468 | 77 | 484 | 1.13e-104 | 320 |
| Msa0944760 | MtrunA17_Chr4g0026871 | 60.699 | 229 | 89 | 1 | 245 | 472 | 1 | 229 | 3.95e-100 | 300 |
| Msa0944760 | MtrunA17_Chr4g0030591 | 38.761 | 436 | 238 | 7 | 63 | 478 | 27 | 453 | 5.12e-98 | 303 |
| Msa0944760 | MtrunA17_Chr4g0030601 | 38.208 | 424 | 248 | 6 | 63 | 478 | 27 | 444 | 1.57e-95 | 296 |
| Msa0944760 | MtrunA17_Chr3g0115021 | 40.194 | 413 | 239 | 4 | 60 | 468 | 75 | 483 | 5.38e-95 | 295 |
| Msa0944760 | MtrunA17_Chr3g0115041 | 40.194 | 413 | 239 | 4 | 60 | 468 | 75 | 483 | 5.55e-95 | 295 |
| Msa0944760 | MtrunA17_Chr1g0212951 | 35.683 | 454 | 255 | 8 | 45 | 467 | 4 | 451 | 2.73e-93 | 291 |
| Msa0944760 | MtrunA17_Chr6g0469631 | 41.626 | 406 | 229 | 4 | 67 | 468 | 81 | 482 | 4.73e-93 | 290 |
| Msa0944760 | MtrunA17_Chr4g0030581 | 37.788 | 434 | 244 | 7 | 63 | 478 | 27 | 452 | 1.08e-92 | 289 |
| Msa0944760 | MtrunA17_Chr2g0327721 | 38.515 | 431 | 226 | 10 | 63 | 467 | 27 | 444 | 1.64e-92 | 289 |
| Msa0944760 | MtrunA17_Chr4g0026791 | 60.894 | 179 | 69 | 1 | 245 | 422 | 1 | 179 | 2.93e-74 | 231 |
| Msa0944760 | MtrunA17_Chr4g0026721 | 60.870 | 161 | 63 | 0 | 312 | 472 | 1 | 161 | 1.27e-67 | 214 |
| Msa0944760 | MtrunA17_Chr4g0026861 | 51.445 | 173 | 83 | 1 | 49 | 220 | 43 | 215 | 1.92e-56 | 186 |
| Msa0944760 | MtrunA17_Chr7g0250651 | 41.667 | 156 | 83 | 4 | 2 | 151 | 33 | 186 | 1.61e-29 | 114 |
| Msa0944760 | MtrunA17_Chr4g0026801 | 39.241 | 158 | 90 | 3 | 12 | 163 | 1 | 158 | 2.38e-28 | 110 |
| Msa0944760 | MtrunA17_Chr4g0040421 | 23.462 | 260 | 162 | 8 | 183 | 437 | 152 | 379 | 6.65e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944760 | AT1G04220.1 | 56.108 | 483 | 197 | 6 | 2 | 471 | 36 | 516 | 0.0 | 560 |
| Msa0944760 | AT2G26640.1 | 56.303 | 476 | 200 | 4 | 2 | 471 | 31 | 504 | 0.0 | 550 |
| Msa0944760 | AT5G43760.1 | 60.369 | 434 | 162 | 4 | 48 | 471 | 88 | 521 | 0.0 | 541 |
| Msa0944760 | AT2G16280.1 | 51.471 | 476 | 220 | 4 | 2 | 470 | 39 | 510 | 2.11e-174 | 500 |
| Msa0944760 | AT1G19440.1 | 51.261 | 476 | 221 | 4 | 2 | 470 | 43 | 514 | 5.00e-174 | 499 |
| Msa0944760 | AT4G34510.1 | 50.844 | 474 | 226 | 5 | 2 | 472 | 18 | 487 | 3.20e-172 | 493 |
| Msa0944760 | AT1G01120.1 | 53.162 | 427 | 190 | 2 | 52 | 468 | 98 | 524 | 1.31e-171 | 493 |
| Msa0944760 | AT2G46720.1 | 50.227 | 440 | 213 | 3 | 32 | 468 | 27 | 463 | 8.64e-165 | 474 |
| Msa0944760 | AT1G25450.1 | 48.529 | 476 | 236 | 4 | 2 | 471 | 15 | 487 | 2.23e-158 | 458 |
| Msa0944760 | AT3G10280.1 | 49.091 | 440 | 211 | 4 | 32 | 468 | 27 | 456 | 2.50e-157 | 454 |
| Msa0944760 | AT4G34250.1 | 48.649 | 481 | 230 | 6 | 6 | 473 | 14 | 490 | 8.10e-157 | 454 |
| Msa0944760 | AT1G68530.1 | 46.751 | 477 | 243 | 5 | 2 | 471 | 20 | 492 | 1.13e-156 | 454 |
| Msa0944760 | AT4G34520.1 | 52.459 | 427 | 190 | 4 | 55 | 470 | 66 | 490 | 2.71e-155 | 451 |
| Msa0944760 | AT2G15090.1 | 52.000 | 425 | 194 | 5 | 55 | 470 | 56 | 479 | 1.68e-154 | 448 |
| Msa0944760 | AT2G26250.1 | 43.976 | 498 | 250 | 2 | 2 | 470 | 53 | 550 | 2.27e-153 | 447 |
| Msa0944760 | AT1G71160.1 | 45.991 | 424 | 227 | 2 | 45 | 468 | 25 | 446 | 6.93e-135 | 397 |
| Msa0944760 | AT5G49070.1 | 45.154 | 423 | 228 | 3 | 51 | 471 | 36 | 456 | 1.14e-124 | 371 |
| Msa0944760 | AT3G52160.1 | 43.373 | 415 | 203 | 3 | 46 | 459 | 66 | 449 | 1.55e-117 | 353 |
| Msa0944760 | AT3G52160.2 | 45.604 | 364 | 167 | 2 | 96 | 459 | 4 | 336 | 8.33e-110 | 329 |
| Msa0944760 | AT2G28630.2 | 38.462 | 429 | 243 | 7 | 68 | 478 | 32 | 457 | 2.58e-100 | 309 |
| Msa0944760 | AT2G28630.1 | 38.462 | 429 | 243 | 7 | 68 | 478 | 32 | 457 | 2.58e-100 | 309 |
| Msa0944760 | AT1G07720.1 | 38.679 | 424 | 238 | 7 | 63 | 467 | 27 | 447 | 2.70e-97 | 301 |
| Msa0944760 | AT5G04530.1 | 40.326 | 429 | 231 | 10 | 56 | 467 | 17 | 437 | 2.97e-97 | 301 |
| Msa0944760 | AT1G07720.2 | 38.679 | 424 | 238 | 7 | 63 | 467 | 70 | 490 | 3.27e-97 | 303 |
| Msa0944760 | AT1G68530.2 | 48.387 | 279 | 142 | 1 | 49 | 327 | 73 | 349 | 5.63e-89 | 277 |
| Msa0944760 | AT5G49070.2 | 41.219 | 279 | 163 | 1 | 51 | 329 | 36 | 313 | 1.54e-65 | 214 |
| Msa0944760 | AT4G34850.2 | 25.306 | 245 | 145 | 9 | 201 | 436 | 91 | 306 | 4.44e-12 | 67.4 |
| Msa0944760 | AT4G34850.1 | 25.306 | 245 | 145 | 9 | 201 | 436 | 164 | 379 | 7.31e-12 | 67.4 |
Find 72 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATATGGCAAATGGCTTT+TGG | 0.246325 | 6_3:+21801795 | Msa0944760:CDS |
| GTTAATCATTATAAACTTAG+AGG | 0.259701 | 6_3:+21799121 | Msa0944760:CDS |
| TTGGATAGAGCAAAACATTT+TGG | 0.264127 | 6_3:+21798836 | Msa0944760:CDS |
| AGCACTAAAGCATATGAGTT+TGG | 0.291741 | 6_3:-21801177 | None:intergenic |
| TCCATTAGTCCTCCCAATTT+CGG | 0.294314 | 6_3:+21801497 | Msa0944760:CDS |
| GGAATTTCTAATAATGCTTC+AGG | 0.313917 | 6_3:-21798935 | None:intergenic |
| TCCGAAATTGGGAGGACTAA+TGG | 0.324601 | 6_3:-21801498 | None:intergenic |
| GTTCAATTCAACTACATAAC+TGG | 0.326614 | 6_3:-21802110 | None:intergenic |
| AGCTAAGGGGAGAGTTAAAA+AGG | 0.330815 | 6_3:+21801767 | Msa0944760:CDS |
| AGATTATTGATTATAATATT+CGG | 0.334053 | 6_3:+21802087 | Msa0944760:three_prime_UTR |
| AAAGTTGAAGCTAAAGATAT+TGG | 0.336152 | 6_3:+21799040 | Msa0944760:CDS |
| TGTGTCTAGAAAGAATAATT+AGG | 0.340619 | 6_3:+21801988 | Msa0944760:three_prime_UTR |
| TTGTTCATTGGCAATGGAAC+AGG | 0.342492 | 6_3:-21801915 | None:intergenic |
| TAACTTTCATGTCATGTTTG+TGG | 0.344699 | 6_3:+21801961 | Msa0944760:three_prime_UTR |
| TAGAAATGCTTCAACATTGT+TGG | 0.353388 | 6_3:-21798566 | None:intergenic |
| AACTTAAAATTCGGCATGTA+TGG | 0.357301 | 6_3:-21801579 | None:intergenic |
| TTAATCATATGTTTGTTCAT+TGG | 0.363214 | 6_3:-21801927 | None:intergenic |
| TTGCACAAAAGAAATGTTGT+TGG | 0.390520 | 6_3:+21798817 | Msa0944760:CDS |
| GATCTATAATCTTAGTGGTA+TGG | 0.390916 | 6_3:+21799153 | Msa0944760:CDS |
| GCACTAAAGCATATGAGTTT+GGG | 0.397910 | 6_3:-21801176 | None:intergenic |
| TACTAATTGTCTCTTTCGAA+TGG | 0.399551 | 6_3:+21801257 | Msa0944760:CDS |
| AATATCTTTAGCTTCAACTT+TGG | 0.416100 | 6_3:-21799038 | None:intergenic |
| TCGAACGCTAACTTAAAATT+CGG | 0.417831 | 6_3:-21801588 | None:intergenic |
| TTAAGGTTAATACTGCTGTT+TGG | 0.420779 | 6_3:+21801826 | Msa0944760:CDS |
| CTATATAGTGTCATTCTTGA+AGG | 0.424575 | 6_3:-21801693 | None:intergenic |
| ATCTATAATCTTAGTGGTAT+GGG | 0.428495 | 6_3:+21799154 | Msa0944760:CDS |
| TTTATCAATATTGATGGTTG+AGG | 0.454477 | 6_3:-21798689 | None:intergenic |
| TGTTGTTGAAAAGGATAGCT+AGG | 0.454589 | 6_3:-21798525 | None:intergenic |
| GTGTGTGAATGTTGTTGAAA+AGG | 0.454604 | 6_3:-21798534 | None:intergenic |
| GGGACATAAAATATGGCAAA+TGG | 0.457927 | 6_3:+21801788 | Msa0944760:CDS |
| ACTAATTGTCTCTTTCGAAT+GGG | 0.459375 | 6_3:+21801258 | Msa0944760:CDS |
| TCATCAAGTGTTAGTCTTGG+TGG | 0.459635 | 6_3:-21798956 | None:intergenic |
| AAATACCTCAAGAAGACGTT+TGG | 0.460466 | 6_3:-21799209 | None:intergenic |
| ACACATCATCAAGTTCTGTT+TGG | 0.465892 | 6_3:+21801724 | Msa0944760:CDS |
| CGATGGATGACTTGAGAGTA+GGG | 0.466110 | 6_3:-21801292 | None:intergenic |
| AGAATGACACTATATAGATA+TGG | 0.470646 | 6_3:+21801699 | Msa0944760:CDS |
| AGTGGTATGGGATGCAGTGC+TGG | 0.470681 | 6_3:+21799166 | Msa0944760:CDS |
| ATATGTTTGTTCATTGGCAA+TGG | 0.471516 | 6_3:-21801921 | None:intergenic |
| GCTTCATCAAGTGTTAGTCT+TGG | 0.477201 | 6_3:-21798959 | None:intergenic |
| TTCGAAAGAGACAATTAGTA+AGG | 0.478311 | 6_3:-21801254 | None:intergenic |
| ATTGTCTTATTGTGAAGCTA+AGG | 0.483820 | 6_3:+21801752 | Msa0944760:CDS |
| CATGAAAATGTAGTAAACTA+AGG | 0.486928 | 6_3:-21798732 | None:intergenic |
| TGTGACATGCAAAATCTACT+AGG | 0.521489 | 6_3:-21798775 | None:intergenic |
| TTTGAGCGGCTACGGTCCGA+TGG | 0.522197 | 6_3:-21801309 | None:intergenic |
| TTGTCTTATTGTGAAGCTAA+GGG | 0.526933 | 6_3:+21801753 | Msa0944760:CDS |
| CCGATGGATGACTTGAGAGT+AGG | 0.528757 | 6_3:-21801293 | None:intergenic |
| CAATTAGTAAGGATCATTGA+AGG | 0.529851 | 6_3:-21801243 | None:intergenic |
| TTAATCATTATAAACTTAGA+GGG | 0.529909 | 6_3:+21799122 | Msa0944760:CDS |
| AGGATCTCATGAATGTTGCT+AGG | 0.531519 | 6_3:+21801442 | Msa0944760:CDS |
| GCGGTAGAGCGGTTCTTGAT+CGG | 0.540567 | 6_3:+21801631 | Msa0944760:CDS |
| AATTGTCTCTTTCGAATGGG+TGG | 0.541404 | 6_3:+21801261 | Msa0944760:CDS |
| TGCTTCAGGAACATAAGTGA+TGG | 0.543655 | 6_3:-21798921 | None:intergenic |
| TAAAGATATTGGAATTCTTG+TGG | 0.557701 | 6_3:+21799051 | Msa0944760:CDS |
| GACTAACACTTGATGAAGCA+AGG | 0.570909 | 6_3:+21798963 | Msa0944760:CDS |
| GGATCTCATGAATGTTGCTA+GGG | 0.577726 | 6_3:+21801443 | Msa0944760:CDS |
| TCTCTTTCGAATGGGTGGAT+CGG | 0.581140 | 6_3:+21801266 | Msa0944760:CDS |
| GTAGTAGCTACATCATGTGT+AGG | 0.584328 | 6_3:+21798635 | Msa0944760:CDS |
| AATTAGTAAGGATCATTGAA+GGG | 0.585870 | 6_3:-21801242 | None:intergenic |
| CAGTGCTGGTGTTATTGCAG+TGG | 0.587920 | 6_3:+21799180 | Msa0944760:CDS |
| TGTTCATTGGCAATGGAACA+GGG | 0.590457 | 6_3:-21801914 | None:intergenic |
| CTTTGCCAAACGTCTTCTTG+AGG | 0.595847 | 6_3:+21799204 | Msa0944760:CDS |
| CATGCATACGGGCGGTAGAG+CGG | 0.599254 | 6_3:+21801620 | Msa0944760:CDS |
| GCTTCAGGAACATAAGTGAT+GGG | 0.600651 | 6_3:-21798920 | None:intergenic |
| ACAATAGTATCTGAAAGTGA+TGG | 0.605880 | 6_3:-21799100 | None:intergenic |
| GTTGTTGAAAAGGATAGCTA+GGG | 0.606417 | 6_3:-21798524 | None:intergenic |
| GTATCTGAAAGTGATGGTGT+AGG | 0.606742 | 6_3:-21799094 | None:intergenic |
| ACTCGGTGTTAAACTATCGA+AGG | 0.617292 | 6_3:+21801422 | Msa0944760:CDS |
| TGTCTTATTGTGAAGCTAAG+GGG | 0.629341 | 6_3:+21801754 | Msa0944760:CDS |
| CGTACACACATAACATCGCT+CGG | 0.629342 | 6_3:+21801474 | Msa0944760:CDS |
| CCTACTCTCAAGTCATCCAT+CGG | 0.642889 | 6_3:+21801293 | Msa0944760:CDS |
| CAAATCTCAAGCATATACAA+AGG | 0.644919 | 6_3:+21801213 | Msa0944760:CDS |
| CATTCGTTGCGCACTCACGT+AGG | 0.677333 | 6_3:+21801345 | Msa0944760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAATTATAAAAGAG+TGG | + | chr6_3:21799844-21799863 | Msa0944760:intron | 10.0% |
| !! | TAAAAAAATTATAAAAGAGT+GGG | + | chr6_3:21799845-21799864 | Msa0944760:intron | 10.0% |
| !!! | TATTTTTCTTTTTCTTTTTT+TGG | - | chr6_3:21800221-21800240 | None:intergenic | 10.0% |
| !!! | ATGTATATGTTATTTTTTTT+CGG | - | chr6_3:21800398-21800417 | None:intergenic | 10.0% |
| !!! | ATTATTTTTGTTTTTTTTGT+TGG | - | chr6_3:21800801-21800820 | None:intergenic | 10.0% |
| !!! | AGATTATTGATTATAATATT+CGG | + | chr6_3:21802087-21802106 | Msa0944760:three_prime_UTR | 10.0% |
| !!! | AATGATTTTATCAATATTGA+TGG | - | chr6_3:21798698-21798717 | None:intergenic | 15.0% |
| !! | TTAATCATTATAAACTTAGA+GGG | + | chr6_3:21799122-21799141 | Msa0944760:CDS | 15.0% |
| !!! | AAAGAGTACAAAATTATTTA+AGG | + | chr6_3:21799296-21799315 | Msa0944760:intron | 15.0% |
| !! | AAAAAAAAAATGAAAATGTC+TGG | - | chr6_3:21799446-21799465 | None:intergenic | 15.0% |
| !!! | TATTTTATCTAAAAGGTTAT+TGG | + | chr6_3:21799666-21799685 | Msa0944760:intron | 15.0% |
| !! | TTATATGAGAAAACAATATA+TGG | - | chr6_3:21800634-21800653 | None:intergenic | 15.0% |
| !!! | ATATTGTTTTCTCATATAAT+TGG | + | chr6_3:21800635-21800654 | Msa0944760:intron | 15.0% |
| !!! | TGAAGATATTTTATAATTGA+TGG | + | chr6_3:21800916-21800935 | Msa0944760:intron | 15.0% |
| !!! | GTTTGTTAAATTTATTTGTA+GGG | - | chr6_3:21801070-21801089 | None:intergenic | 15.0% |
| !!! | TGTTTGTTAAATTTATTTGT+AGG | - | chr6_3:21801071-21801090 | None:intergenic | 15.0% |
| !!! | TGATTCATAAGATTTTAGAA+AGG | + | chr6_3:21798885-21798904 | Msa0944760:CDS | 20.0% |
| !!! | GAATCAAATTTAGTTCTTTT+TGG | + | chr6_3:21798989-21799008 | Msa0944760:CDS | 20.0% |
| !! | GTTAATCATTATAAACTTAG+AGG | + | chr6_3:21799121-21799140 | Msa0944760:CDS | 20.0% |
| !!! | ATTTTGATCTATAATCTTAG+TGG | + | chr6_3:21799148-21799167 | Msa0944760:CDS | 20.0% |
| !!! | ACTATTTTATACTTGTTTGT+TGG | + | chr6_3:21799357-21799376 | Msa0944760:intron | 20.0% |
| !! | CCTCTAGTATTAAAATATTT+GGG | - | chr6_3:21799495-21799514 | None:intergenic | 20.0% |
| !! | ACCTCTAGTATTAAAATATT+TGG | - | chr6_3:21799496-21799515 | None:intergenic | 20.0% |
| !! | AACTATATGAAATTGATGAA+TGG | - | chr6_3:21799728-21799747 | None:intergenic | 20.0% |
| !!! | CTGCTATTAATTTTTTTTGA+AGG | - | chr6_3:21799790-21799809 | None:intergenic | 20.0% |
| !! | GAGATATCAATATGTATTTA+TGG | + | chr6_3:21799809-21799828 | Msa0944760:intron | 20.0% |
| !! | GTTATTTACATATAGCAAAA+GGG | + | chr6_3:21799950-21799969 | Msa0944760:intron | 20.0% |
| !!! | ACAAATAAAAAAAGTGTAGT+TGG | + | chr6_3:21800088-21800107 | Msa0944760:intron | 20.0% |
| !! | AAAATAAAATATGCAAGATC+CGG | + | chr6_3:21800352-21800371 | Msa0944760:intron | 20.0% |
| !!! | AAGAGTTTTGCTATTTATTA+TGG | + | chr6_3:21800456-21800475 | Msa0944760:intron | 20.0% |
| !! | TTAAAAATGTTCTCATATAG+TGG | - | chr6_3:21800595-21800614 | None:intergenic | 20.0% |
| !! | CAGAATCTTTAATTCAATAA+TGG | - | chr6_3:21800743-21800762 | None:intergenic | 20.0% |
| !! | ATAATCAAGCTTAATTAGTT+AGG | - | chr6_3:21801132-21801151 | None:intergenic | 20.0% |
| !! | TTAAAAAGGGACATAAAATA+TGG | + | chr6_3:21801781-21801800 | Msa0944760:CDS | 20.0% |
| !! | TTAATCATATGTTTGTTCAT+TGG | - | chr6_3:21801930-21801949 | None:intergenic | 20.0% |
| !! | TTTATCAATATTGATGGTTG+AGG | - | chr6_3:21798692-21798711 | None:intergenic | 25.0% |
| ! | CATGAAAATGTAGTAAACTA+AGG | - | chr6_3:21798735-21798754 | None:intergenic | 25.0% |
| !! | TCTACTAGGTATATTTTGTT+TGG | - | chr6_3:21798764-21798783 | None:intergenic | 25.0% |
| !!! | GTGCAAATACAATTGTTTTT+TGG | - | chr6_3:21798803-21798822 | None:intergenic | 25.0% |
| !! | AATATCTTTAGCTTCAACTT+TGG | - | chr6_3:21799041-21799060 | None:intergenic | 25.0% |
| ! | AAAGTTGAAGCTAAAGATAT+TGG | + | chr6_3:21799040-21799059 | Msa0944760:CDS | 25.0% |
| ! | TAAAGATATTGGAATTCTTG+TGG | + | chr6_3:21799051-21799070 | Msa0944760:CDS | 25.0% |
| ! | ATCTATAATCTTAGTGGTAT+GGG | + | chr6_3:21799154-21799173 | Msa0944760:CDS | 25.0% |
| !!! | CCCAAATATTTTAATACTAG+AGG | + | chr6_3:21799492-21799511 | Msa0944760:intron | 25.0% |
| !!! | CGGTTTTAGTTGTTTTTTTT+TGG | + | chr6_3:21799928-21799947 | Msa0944760:intron | 25.0% |
| ! | GGTTATTTACATATAGCAAA+AGG | + | chr6_3:21799949-21799968 | Msa0944760:intron | 25.0% |
| !! | CATTAGCTGTATTAATTTGA+AGG | + | chr6_3:21800130-21800149 | Msa0944760:intron | 25.0% |
| ! | AAATAAAATATGCAAGATCC+GGG | + | chr6_3:21800353-21800372 | Msa0944760:intron | 25.0% |
| !!! | ATGTTATTTTTTTTCGGTAG+TGG | - | chr6_3:21800392-21800411 | None:intergenic | 25.0% |
| !!! | ATACTGGAAGATACTTTTTT+TGG | - | chr6_3:21800662-21800681 | None:intergenic | 25.0% |
| ! | TATTTATGACATGCAATTAC+AGG | + | chr6_3:21801149-21801168 | Msa0944760:intron | 25.0% |
| ! | AATTAGTAAGGATCATTGAA+GGG | - | chr6_3:21801245-21801264 | None:intergenic | 25.0% |
| ! | ATGTGAAAAATTTAGTTGAG+AGG | + | chr6_3:21801532-21801551 | Msa0944760:CDS | 25.0% |
| ! | AGAATGACACTATATAGATA+TGG | + | chr6_3:21801699-21801718 | Msa0944760:CDS | 25.0% |
| !!! | CAAGCATTTTTCAATGATTT+AGG | - | chr6_3:21801873-21801892 | None:intergenic | 25.0% |
| ! | CTAAATCATTGAAAAATGCT+TGG | + | chr6_3:21801871-21801890 | Msa0944760:CDS | 25.0% |
| ! | TGTGTCTAGAAAGAATAATT+AGG | + | chr6_3:21801988-21802007 | Msa0944760:three_prime_UTR | 25.0% |
| TAGAAATGCTTCAACATTGT+TGG | - | chr6_3:21798569-21798588 | None:intergenic | 30.0% | |
| TTGCACAAAAGAAATGTTGT+TGG | + | chr6_3:21798817-21798836 | Msa0944760:CDS | 30.0% | |
| ! | TTGGATAGAGCAAAACATTT+TGG | + | chr6_3:21798836-21798855 | Msa0944760:CDS | 30.0% |
| !! | CATAAGATTTTAGAAAGGTC+AGG | + | chr6_3:21798890-21798909 | Msa0944760:CDS | 30.0% |
| GGAATTTCTAATAATGCTTC+AGG | - | chr6_3:21798938-21798957 | None:intergenic | 30.0% | |
| ACAATAGTATCTGAAAGTGA+TGG | - | chr6_3:21799103-21799122 | None:intergenic | 30.0% | |
| GATCTATAATCTTAGTGGTA+TGG | + | chr6_3:21799153-21799172 | Msa0944760:CDS | 30.0% | |
| ! | TGATATTGCTTCTTGTTTGT+CGG | + | chr6_3:21799333-21799352 | Msa0944760:intron | 30.0% |
| AAAATATTTGGGTCTCTCAA+TGG | - | chr6_3:21799484-21799503 | None:intergenic | 30.0% | |
| AATAAAATATGCAAGATCCG+GGG | + | chr6_3:21800354-21800373 | Msa0944760:intron | 30.0% | |
| GTGTGAATTTGTATCATTTG+CGG | - | chr6_3:21800522-21800541 | None:intergenic | 30.0% | |
| CAAATCTCAAGCATATACAA+AGG | + | chr6_3:21801213-21801232 | Msa0944760:CDS | 30.0% | |
| CAATTAGTAAGGATCATTGA+AGG | - | chr6_3:21801246-21801265 | None:intergenic | 30.0% | |
| TTCGAAAGAGACAATTAGTA+AGG | - | chr6_3:21801257-21801276 | None:intergenic | 30.0% | |
| TACTAATTGTCTCTTTCGAA+TGG | + | chr6_3:21801257-21801276 | Msa0944760:CDS | 30.0% | |
| ACTAATTGTCTCTTTCGAAT+GGG | + | chr6_3:21801258-21801277 | Msa0944760:CDS | 30.0% | |
| GAAGACGAAAAAGAAATACT+CGG | + | chr6_3:21801405-21801424 | Msa0944760:CDS | 30.0% | |
| ! | ACTTGAGTTTTTCCGAAATT+GGG | - | chr6_3:21801512-21801531 | None:intergenic | 30.0% |
| ! | TACTTGAGTTTTTCCGAAAT+TGG | - | chr6_3:21801513-21801532 | None:intergenic | 30.0% |
| AACTTAAAATTCGGCATGTA+TGG | - | chr6_3:21801582-21801601 | None:intergenic | 30.0% | |
| TCGAACGCTAACTTAAAATT+CGG | - | chr6_3:21801591-21801610 | None:intergenic | 30.0% | |
| !! | TGAGCTTGATGATTTTCATA+TGG | + | chr6_3:21801668-21801687 | Msa0944760:CDS | 30.0% |
| ! | CTATATAGTGTCATTCTTGA+AGG | - | chr6_3:21801696-21801715 | None:intergenic | 30.0% |
| ! | ATTGTCTTATTGTGAAGCTA+AGG | + | chr6_3:21801752-21801771 | Msa0944760:CDS | 30.0% |
| ! | TTGTCTTATTGTGAAGCTAA+GGG | + | chr6_3:21801753-21801772 | Msa0944760:CDS | 30.0% |
| ! | AAAATATGGCAAATGGCTTT+TGG | + | chr6_3:21801795-21801814 | Msa0944760:CDS | 30.0% |
| TTAAGGTTAATACTGCTGTT+TGG | + | chr6_3:21801826-21801845 | Msa0944760:CDS | 30.0% | |
| ATCATTGAAAAATGCTTGGA+TGG | + | chr6_3:21801875-21801894 | Msa0944760:CDS | 30.0% | |
| ATATGTTTGTTCATTGGCAA+TGG | - | chr6_3:21801924-21801943 | None:intergenic | 30.0% | |
| TAACTTTCATGTCATGTTTG+TGG | + | chr6_3:21801961-21801980 | Msa0944760:three_prime_UTR | 30.0% | |
| GTTCAATTCAACTACATAAC+TGG | - | chr6_3:21802113-21802132 | None:intergenic | 30.0% | |
| GTTGTTGAAAAGGATAGCTA+GGG | - | chr6_3:21798527-21798546 | None:intergenic | 35.0% | |
| TGTTGTTGAAAAGGATAGCT+AGG | - | chr6_3:21798528-21798547 | None:intergenic | 35.0% | |
| GTGTGTGAATGTTGTTGAAA+AGG | - | chr6_3:21798537-21798556 | None:intergenic | 35.0% | |
| TGTGACATGCAAAATCTACT+AGG | - | chr6_3:21798778-21798797 | None:intergenic | 35.0% | |
| !! | ATTTTAGAAAGGTCAGGTGT+GGG | + | chr6_3:21798896-21798915 | Msa0944760:CDS | 35.0% |
| AAATACCTCAAGAAGACGTT+TGG | - | chr6_3:21799212-21799231 | None:intergenic | 35.0% | |
| !!! | TATTTTTTTTCGGTAGTGGC+CGG | - | chr6_3:21800388-21800407 | None:intergenic | 35.0% |
| TAGTGGTGAAATAGATACAG+TGG | - | chr6_3:21800578-21800597 | None:intergenic | 35.0% | |
| GTTTCACTGTCAATCATCAT+AGG | + | chr6_3:21800716-21800735 | Msa0944760:intron | 35.0% | |
| TGTGCTAAGCTCACTTATTA+AGG | - | chr6_3:21801044-21801063 | None:intergenic | 35.0% | |
| CAAATTACATGTAGCTAGCA+AGG | - | chr6_3:21801107-21801126 | None:intergenic | 35.0% | |
| GCACTAAAGCATATGAGTTT+GGG | - | chr6_3:21801179-21801198 | None:intergenic | 35.0% | |
| AGCACTAAAGCATATGAGTT+TGG | - | chr6_3:21801180-21801199 | None:intergenic | 35.0% | |
| !! | GCATCAACTGATATTTTGAG+CGG | - | chr6_3:21801326-21801345 | None:intergenic | 35.0% |
| ! | CGATCAATTTTGCATGCATA+CGG | + | chr6_3:21801608-21801627 | Msa0944760:CDS | 35.0% |
| ! | GATCAATTTTGCATGCATAC+GGG | + | chr6_3:21801609-21801628 | Msa0944760:CDS | 35.0% |
| ACACATCATCAAGTTCTGTT+TGG | + | chr6_3:21801724-21801743 | Msa0944760:CDS | 35.0% | |
| ! | TGTCTTATTGTGAAGCTAAG+GGG | + | chr6_3:21801754-21801773 | Msa0944760:CDS | 35.0% |
| GGGACATAAAATATGGCAAA+TGG | + | chr6_3:21801788-21801807 | Msa0944760:CDS | 35.0% | |
| GTAGTAGCTACATCATGTGT+AGG | + | chr6_3:21798635-21798654 | Msa0944760:CDS | 40.0% | |
| !! | GATTTTAGAAAGGTCAGGTG+TGG | + | chr6_3:21798895-21798914 | Msa0944760:CDS | 40.0% |
| GCTTCAGGAACATAAGTGAT+GGG | - | chr6_3:21798923-21798942 | None:intergenic | 40.0% | |
| TGCTTCAGGAACATAAGTGA+TGG | - | chr6_3:21798924-21798943 | None:intergenic | 40.0% | |
| !! | TCATCAAGTGTTAGTCTTGG+TGG | - | chr6_3:21798959-21798978 | None:intergenic | 40.0% |
| ! | GCTTCATCAAGTGTTAGTCT+TGG | - | chr6_3:21798962-21798981 | None:intergenic | 40.0% |
| GACTAACACTTGATGAAGCA+AGG | + | chr6_3:21798963-21798982 | Msa0944760:CDS | 40.0% | |
| ! | GTATCTGAAAGTGATGGTGT+AGG | - | chr6_3:21799097-21799116 | None:intergenic | 40.0% |
| ACCTTAGTCCTACTCAGATA+CGG | - | chr6_3:21799904-21799923 | None:intergenic | 40.0% | |
| TGAGTAGGACTAAGGTAGTT+CGG | + | chr6_3:21799908-21799927 | Msa0944760:intron | 40.0% | |
| ! | TGAGTTTAGCTCAGTTGGTT+GGG | + | chr6_3:21800320-21800339 | Msa0944760:intron | 40.0% |
| !!! | ATTTTTTTTCGGTAGTGGCC+GGG | - | chr6_3:21800387-21800406 | None:intergenic | 40.0% |
| CTGTGACTGAACACATATAC+TGG | - | chr6_3:21800678-21800697 | None:intergenic | 40.0% | |
| AATTGTCTCTTTCGAATGGG+TGG | + | chr6_3:21801261-21801280 | Msa0944760:CDS | 40.0% | |
| !! | ACTGATATTTTGAGCGGCTA+CGG | - | chr6_3:21801320-21801339 | None:intergenic | 40.0% |
| !! | ACTCGGTGTTAAACTATCGA+AGG | + | chr6_3:21801422-21801441 | Msa0944760:CDS | 40.0% |
| AGGATCTCATGAATGTTGCT+AGG | + | chr6_3:21801442-21801461 | Msa0944760:CDS | 40.0% | |
| GGATCTCATGAATGTTGCTA+GGG | + | chr6_3:21801443-21801462 | Msa0944760:CDS | 40.0% | |
| TCCATTAGTCCTCCCAATTT+CGG | + | chr6_3:21801497-21801516 | Msa0944760:CDS | 40.0% | |
| ! | TGAGTTTTTCCGAAATTGGG+AGG | - | chr6_3:21801509-21801528 | None:intergenic | 40.0% |
| AGCTAAGGGGAGAGTTAAAA+AGG | + | chr6_3:21801767-21801786 | Msa0944760:CDS | 40.0% | |
| GCTAAGGGGAGAGTTAAAAA+GGG | + | chr6_3:21801768-21801787 | Msa0944760:CDS | 40.0% | |
| ! | GGCTTTTGGATCTGGATTTA+AGG | + | chr6_3:21801809-21801828 | Msa0944760:CDS | 40.0% |
| TGTTCATTGGCAATGGAACA+GGG | - | chr6_3:21801917-21801936 | None:intergenic | 40.0% | |
| TTGTTCATTGGCAATGGAAC+AGG | - | chr6_3:21801918-21801937 | None:intergenic | 40.0% | |
| CTTTGCCAAACGTCTTCTTG+AGG | + | chr6_3:21799204-21799223 | Msa0944760:CDS | 45.0% | |
| CCTTAGTCCTACTCAGATAC+GGG | - | chr6_3:21799903-21799922 | None:intergenic | 45.0% | |
| ! | GTGAGTTTAGCTCAGTTGGT+TGG | + | chr6_3:21800319-21800338 | Msa0944760:intron | 45.0% |
| !!! | TTTTTTTTCGGTAGTGGCCG+GGG | - | chr6_3:21800386-21800405 | None:intergenic | 45.0% |
| TCTCTTTCGAATGGGTGGAT+CGG | + | chr6_3:21801266-21801285 | Msa0944760:CDS | 45.0% | |
| CGATGGATGACTTGAGAGTA+GGG | - | chr6_3:21801295-21801314 | None:intergenic | 45.0% | |
| CCTACTCTCAAGTCATCCAT+CGG | + | chr6_3:21801293-21801312 | Msa0944760:CDS | 45.0% | |
| CGTACACACATAACATCGCT+CGG | + | chr6_3:21801474-21801493 | Msa0944760:CDS | 45.0% | |
| TCCGAAATTGGGAGGACTAA+TGG | - | chr6_3:21801501-21801520 | None:intergenic | 45.0% | |
| ! | CAATTTTGCATGCATACGGG+CGG | + | chr6_3:21801612-21801631 | Msa0944760:CDS | 45.0% |
| ! | TGGCAAATGGCTTTTGGATC+TGG | + | chr6_3:21801801-21801820 | Msa0944760:CDS | 45.0% |
| !!! | ATATTTTTATTTTATCTAAA+AGG | + | chr6_3:21799659-21799678 | Msa0944760:intron | 5.0% |
| !!! | TTTTTTATTTGTATAAATTT+GGG | - | chr6_3:21800080-21800099 | None:intergenic | 5.0% |
| !!! | TTTTTTTATTTGTATAAATT+TGG | - | chr6_3:21800081-21800100 | None:intergenic | 5.0% |
| !! | CAGTGCTGGTGTTATTGCAG+TGG | + | chr6_3:21799180-21799199 | Msa0944760:CDS | 50.0% |
| ACCCTCAAGCTCCAACCTAT+AGG | + | chr6_3:21799877-21799896 | Msa0944760:intron | 50.0% | |
| ! | GCCTATAGGTTGGAGCTTGA+GGG | - | chr6_3:21799881-21799900 | None:intergenic | 50.0% |
| TCAGATACGGGCCTATAGGT+TGG | - | chr6_3:21799891-21799910 | None:intergenic | 50.0% | |
| CTACTCAGATACGGGCCTAT+AGG | - | chr6_3:21799895-21799914 | None:intergenic | 50.0% | |
| CTATAGGCCCGTATCTGAGT+AGG | + | chr6_3:21799893-21799912 | Msa0944760:intron | 50.0% | |
| CCCGTATCTGAGTAGGACTA+AGG | + | chr6_3:21799900-21799919 | Msa0944760:intron | 50.0% | |
| CCAACTGAGCTAAACTCACG+AGG | - | chr6_3:21800318-21800337 | None:intergenic | 50.0% | |
| ! | CCTCGTGAGTTTAGCTCAGT+TGG | + | chr6_3:21800315-21800334 | Msa0944760:intron | 50.0% |
| CCGATGGATGACTTGAGAGT+AGG | - | chr6_3:21801296-21801315 | None:intergenic | 50.0% | |
| AGTGGTATGGGATGCAGTGC+TGG | + | chr6_3:21799166-21799185 | Msa0944760:CDS | 55.0% | |
| ! | GGCCTATAGGTTGGAGCTTG+AGG | - | chr6_3:21799882-21799901 | None:intergenic | 55.0% |
| AAGATCCGGGGTTCAAACCC+CGG | + | chr6_3:21800366-21800385 | Msa0944760:intron | 55.0% | |
| CATTCGTTGCGCACTCACGT+AGG | + | chr6_3:21801345-21801364 | Msa0944760:CDS | 55.0% | |
| GCGGTAGAGCGGTTCTTGAT+CGG | + | chr6_3:21801631-21801650 | Msa0944760:CDS | 55.0% | |
| TTTGAGCGGCTACGGTCCGA+TGG | - | chr6_3:21801312-21801331 | None:intergenic | 60.0% | |
| CATGCATACGGGCGGTAGAG+CGG | + | chr6_3:21801620-21801639 | Msa0944760:CDS | 60.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | - | chr6_3:21800374-21800393 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 21798519 | 21802165 | 21798519 | ID=Msa0944760;Name=Msa0944760 |
| chr6_3 | mRNA | 21798519 | 21802165 | 21798519 | ID=Msa0944760-mRNA-1;Parent=Msa0944760;Name=Msa0944760-mRNA-1;_AED=0.01;_eAED=0.01;_QI=53|1|1|1|1|1|2|209|479 |
| chr6_3 | exon | 21798519 | 21799225 | 21798519 | ID=Msa0944760-mRNA-1:exon:6496;Parent=Msa0944760-mRNA-1 |
| chr6_3 | exon | 21801171 | 21802165 | 21801171 | ID=Msa0944760-mRNA-1:exon:6497;Parent=Msa0944760-mRNA-1 |
| chr6_3 | five_prime_UTR | 21798519 | 21798571 | 21798519 | ID=Msa0944760-mRNA-1:five_prime_utr;Parent=Msa0944760-mRNA-1 |
| chr6_3 | CDS | 21798572 | 21799225 | 21798572 | ID=Msa0944760-mRNA-1:cds;Parent=Msa0944760-mRNA-1 |
| chr6_3 | CDS | 21801171 | 21801956 | 21801171 | ID=Msa0944760-mRNA-1:cds;Parent=Msa0944760-mRNA-1 |
| chr6_3 | three_prime_UTR | 21801957 | 21802165 | 21801957 | ID=Msa0944760-mRNA-1:three_prime_utr;Parent=Msa0944760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
