Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185490 | sp|Q5XEP9|KCS2_ARATH | 56.108 | 483 | 197 | 6 | 2 | 471 | 36 | 516 | 0.0 | 560 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185490 | A0A1S2XJT1 | 82.942 | 469 | 79 | 1 | 1 | 468 | 1 | 469 | 0.0 | 808 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015710 | Msa0185490 | 0.808261 | 3.378838e-50 | -8.615850e-47 |
| Msa0017510 | Msa0185490 | 0.809143 | 2.189171e-50 | -8.615850e-47 |
| Msa0019600 | Msa0185490 | 0.848659 | 5.322431e-60 | -8.615850e-47 |
| Msa0050040 | Msa0185490 | 0.804993 | 1.654066e-49 | -8.615850e-47 |
| Msa0102990 | Msa0185490 | 0.804807 | 1.808797e-49 | -8.615850e-47 |
| Msa0111750 | Msa0185490 | 0.805375 | 1.376400e-49 | -8.615850e-47 |
| Msa0124130 | Msa0185490 | 0.826896 | 2.108978e-54 | -8.615850e-47 |
| Msa0141120 | Msa0185490 | 0.835800 | 1.358540e-56 | -8.615850e-47 |
| Msa0149140 | Msa0185490 | 0.825769 | 3.913233e-54 | -8.615850e-47 |
| Msa0156250 | Msa0185490 | 0.838210 | 3.293079e-57 | -8.615850e-47 |
| Msa0157290 | Msa0185490 | 0.810106 | 1.359087e-50 | -8.615850e-47 |
| Msa0158600 | Msa0185490 | 0.816360 | 5.757774e-52 | -8.615850e-47 |
| Msa0185490 | Msa0197100 | 0.830110 | 3.532121e-55 | -8.615850e-47 |
| Msa0185490 | Msa0197930 | 0.812544 | 4.018886e-51 | -8.615850e-47 |
| Msa0185490 | Msa0203030 | 0.800202 | 1.609429e-48 | -8.615850e-47 |
| Msa0185490 | Msa0212150 | 0.833901 | 4.087248e-56 | -8.615850e-47 |
| Msa0185490 | Msa0221290 | 0.815774 | 7.780391e-52 | -8.615850e-47 |
| Msa0185490 | Msa0239030 | 0.827658 | 1.385106e-54 | -8.615850e-47 |
| Msa0185490 | Msa0252630 | 0.805628 | 1.217656e-49 | -8.615850e-47 |
| Msa0185490 | Msa0252770 | 0.844232 | 8.585109e-59 | -8.615850e-47 |
| Msa0185490 | Msa0276740 | 0.820737 | 5.856629e-53 | -8.615850e-47 |
| Msa0185490 | Msa0289920 | 0.810627 | 1.049320e-50 | -8.615850e-47 |
| Msa0185490 | Msa0298240 | 0.811423 | 7.053644e-51 | -8.615850e-47 |
| Msa0185490 | Msa0306120 | 0.819280 | 1.261522e-52 | -8.615850e-47 |
| Msa0185490 | Msa0316680 | 0.823769 | 1.158995e-53 | -8.615850e-47 |
| Msa0185490 | Msa0317280 | 0.801541 | 8.578006e-49 | -8.615850e-47 |
| Msa0185490 | Msa0317340 | 0.803258 | 3.798901e-49 | -8.615850e-47 |
| Msa0185490 | Msa0329620 | 0.842321 | 2.777813e-58 | -8.615850e-47 |
| Msa0185490 | Msa0343660 | 0.810635 | 1.045120e-50 | -8.615850e-47 |
| Msa0185490 | Msa0344570 | 0.856039 | 4.211317e-62 | -8.615850e-47 |
| Msa0185490 | Msa0359250 | 0.895405 | 9.886570e-76 | -8.615850e-47 |
| Msa0185490 | Msa0375680 | 0.816223 | 6.177543e-52 | -8.615850e-47 |
| Msa0185490 | Msa0392420 | 0.858906 | 5.971057e-63 | -8.615850e-47 |
| Msa0185490 | Msa0392460 | 0.858096 | 1.041535e-62 | -8.615850e-47 |
| Msa0185490 | Msa0392490 | 0.869450 | 3.069599e-66 | -8.615850e-47 |
| Msa0185490 | Msa0406000 | 0.880476 | 5.319322e-70 | -8.615850e-47 |
| Msa0185490 | Msa0415320 | 0.820589 | 6.331373e-53 | -8.615850e-47 |
| Msa0185490 | Msa0417440 | 0.802426 | 5.643127e-49 | -8.615850e-47 |
| Msa0185490 | Msa0424330 | 0.840751 | 7.201550e-58 | -8.615850e-47 |
| Msa0185490 | Msa0424340 | 0.820794 | 5.680963e-53 | -8.615850e-47 |
| Msa0185490 | Msa0424350 | 0.846805 | 1.724439e-59 | -8.615850e-47 |
| Msa0185490 | Msa0451400 | 0.877832 | 4.579719e-69 | -8.615850e-47 |
| Msa0185490 | Msa0487570 | 0.863165 | 3.024612e-64 | -8.615850e-47 |
| Msa0185490 | Msa0487630 | 0.874867 | 4.825582e-68 | -8.615850e-47 |
| Msa0185490 | Msa0492190 | 0.858839 | 6.252702e-63 | -8.615850e-47 |
| Msa0185490 | Msa0515950 | 0.822471 | 2.326771e-53 | -8.615850e-47 |
| Msa0185490 | Msa0527550 | 0.817333 | 3.482496e-52 | -8.615850e-47 |
| Msa0185490 | Msa0534930 | 0.864713 | 9.974047e-65 | -8.615850e-47 |
| Msa0185490 | Msa0535040 | 0.858769 | 6.561880e-63 | -8.615850e-47 |
| Msa0185490 | Msa0537920 | 0.809731 | 1.636853e-50 | -8.615850e-47 |
| Msa0185490 | Msa0538220 | 0.802508 | 5.426326e-49 | -8.615850e-47 |
| Msa0185490 | Msa0591790 | 0.874425 | 6.823610e-68 | -8.615850e-47 |
| Msa0185490 | Msa0594090 | 0.845873 | 3.095862e-59 | -8.615850e-47 |
| Msa0185490 | Msa0641250 | 0.834775 | 2.466610e-56 | -8.615850e-47 |
| Msa0185490 | Msa0669840 | 0.860147 | 2.529516e-63 | -8.615850e-47 |
| Msa0185490 | Msa0739580 | 0.846765 | 1.768184e-59 | -8.615850e-47 |
| Msa0185490 | Msa0751890 | 0.804235 | 2.380937e-49 | -8.615850e-47 |
| Msa0185490 | Msa0764820 | 0.812790 | 3.550482e-51 | -8.615850e-47 |
| Msa0185490 | Msa0770290 | 0.817439 | 3.295066e-52 | -8.615850e-47 |
| Msa0185490 | Msa0782360 | 0.818216 | 2.200456e-52 | -8.615850e-47 |
| Msa0185490 | Msa0828830 | 0.815754 | 7.860925e-52 | -8.615850e-47 |
| Msa0185490 | Msa0831940 | 0.800688 | 1.281395e-48 | -8.615850e-47 |
| Msa0185490 | Msa0844560 | 0.803755 | 2.995895e-49 | -8.615850e-47 |
| Msa0185490 | Msa0860280 | 0.834037 | 3.777079e-56 | -8.615850e-47 |
| Msa0185490 | Msa0867350 | 0.825890 | 3.661449e-54 | -8.615850e-47 |
| Msa0185490 | Msa0880140 | 0.813756 | 2.178562e-51 | -8.615850e-47 |
| Msa0185490 | Msa0880780 | 0.800691 | 1.280046e-48 | -8.615850e-47 |
| Msa0185490 | Msa0896540 | 0.808816 | 2.572030e-50 | -8.615850e-47 |
| Msa0185490 | Msa0898730 | 0.834609 | 2.715493e-56 | -8.615850e-47 |
| Msa0185490 | Msa0929870 | 0.838803 | 2.314823e-57 | -8.615850e-47 |
| Msa0185490 | Msa0936410 | 0.831816 | 1.347004e-55 | -8.615850e-47 |
| Msa0185490 | Msa0944760 | 0.992657 | 1.268500e-194 | -8.615850e-47 |
| Msa0185490 | Msa0944880 | 0.954959 | 9.089365e-113 | -8.615850e-47 |
| Msa0185490 | Msa0961560 | 0.807893 | 4.046375e-50 | -8.615850e-47 |
| Msa0185490 | Msa0973250 | 0.818046 | 2.404949e-52 | -8.615850e-47 |
| Msa0185490 | Msa0999300 | 0.852641 | 4.040791e-61 | -8.615850e-47 |
| Msa0185490 | Msa0999360 | 0.806429 | 8.259890e-50 | -8.615850e-47 |
| Msa0185490 | Msa0999410 | 0.802369 | 5.795638e-49 | -8.615850e-47 |
| Msa0185490 | Msa1001890 | 0.838991 | 2.069170e-57 | -8.615850e-47 |
| Msa0185490 | Msa1016600 | 0.812989 | 3.211579e-51 | -8.615850e-47 |
| Msa0185490 | Msa1037770 | 0.802208 | 6.256178e-49 | -8.615850e-47 |
| Msa0185490 | Msa1037890 | 0.813499 | 2.481579e-51 | -8.615850e-47 |
| Msa0185490 | Msa1037900 | 0.847272 | 1.284147e-59 | -8.615850e-47 |
| Msa0185490 | Msa1037910 | 0.826359 | 2.833111e-54 | -8.615850e-47 |
| Msa0185490 | Msa1041530 | 0.833779 | 4.384492e-56 | -8.615850e-47 |
| Msa0185490 | Msa1081570 | 0.834118 | 3.605874e-56 | -8.615850e-47 |
| Msa0185490 | Msa1084520 | 0.825679 | 4.110034e-54 | -8.615850e-47 |
| Msa0185490 | Msa1125810 | 0.810110 | 1.356437e-50 | -8.615850e-47 |
| Msa0185490 | Msa1127140 | 0.842506 | 2.480746e-58 | -8.615850e-47 |
| Msa0185490 | Msa1129960 | 0.835097 | 2.045974e-56 | -8.615850e-47 |
| Msa0185490 | Msa1129970 | 0.823060 | 1.697544e-53 | -8.615850e-47 |
| Msa0185490 | Msa1130010 | 0.805654 | 1.202803e-49 | -8.615850e-47 |
| Msa0185490 | Msa1145020 | 0.803616 | 3.201227e-49 | -8.615850e-47 |
| Msa0185490 | Msa1166400 | 0.830400 | 3.000070e-55 | -8.615850e-47 |
| Msa0185490 | Msa1169990 | 0.808341 | 3.248396e-50 | -8.615850e-47 |
| Msa0185490 | Msa1171310 | 0.806242 | 9.045052e-50 | -8.615850e-47 |
| Msa0185490 | Msa1201110 | 0.830475 | 2.876476e-55 | -8.615850e-47 |
| Msa0185490 | Msa1201160 | 0.864639 | 1.052457e-64 | -8.615850e-47 |
| Msa0185490 | Msa1218550 | 0.806325 | 8.690430e-50 | -8.615850e-47 |
| Msa0185490 | Msa1228190 | 0.847317 | 1.248449e-59 | -8.615850e-47 |
| Msa0185490 | Msa1271260 | 0.813366 | 2.654385e-51 | -8.615850e-47 |
| Msa0185490 | Msa1294290 | 0.854510 | 1.172970e-61 | -8.615850e-47 |
| Msa0185490 | Msa1305510 | 0.841211 | 5.453432e-58 | -8.615850e-47 |
| Msa0185490 | Msa1374550 | 0.845431 | 4.080110e-59 | -8.615850e-47 |
| Msa0185490 | Msa1379970 | 0.849113 | 3.982800e-60 | -8.615850e-47 |
| Msa0185490 | Msa1394890 | 0.832341 | 9.989347e-56 | -8.615850e-47 |
| Msa0185490 | Msa1406780 | 0.853142 | 2.905860e-61 | -8.615850e-47 |
| Msa0185490 | Msa1420060 | 0.816339 | 5.819945e-52 | -8.615850e-47 |
| Msa0185490 | Msa1421550 | 0.874185 | 8.230511e-68 | -8.615850e-47 |
| Msa0185490 | Msa1423460 | 0.997430 | 2.135751e-242 | -8.615850e-47 |
| Msa0185490 | Msa1430240 | 0.800295 | 1.541506e-48 | -8.615850e-47 |
| Msa0185490 | Msa1431850 | 0.858745 | 6.670910e-63 | -8.615850e-47 |
| Msa0185490 | Msa1436570 | 0.803594 | 3.236003e-49 | -8.615850e-47 |
| Msa0185490 | Msa1455320 | 0.813782 | 2.149856e-51 | -8.615850e-47 |
| Msa0185490 | Msa1459530 | 0.819849 | 9.359710e-53 | -8.615850e-47 |
| Msa0185490 | Msa1461060 | 0.831637 | 1.490822e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185490 | MtrunA17_Chr1g0188051 | 58.650 | 474 | 192 | 2 | 2 | 471 | 34 | 507 | 0.0 | 578 |
| Msa0185490 | MtrunA17_Chr1g0166191 | 58.491 | 477 | 188 | 4 | 2 | 471 | 40 | 513 | 0.0 | 571 |
| Msa0185490 | MtrunA17_Chr4g0063011 | 55.672 | 476 | 203 | 4 | 2 | 471 | 22 | 495 | 0.0 | 545 |
| Msa0185490 | MtrunA17_Chr6g0461631 | 96.958 | 263 | 8 | 0 | 217 | 479 | 3 | 265 | 0.0 | 541 |
| Msa0185490 | MtrunA17_Chr6g0480561 | 56.206 | 427 | 185 | 2 | 43 | 468 | 41 | 466 | 1.84e-175 | 501 |
| Msa0185490 | MtrunA17_Chr7g0276251 | 56.595 | 417 | 178 | 2 | 60 | 473 | 115 | 531 | 2.09e-171 | 493 |
| Msa0185490 | MtrunA17_Chr2g0306781 | 63.562 | 365 | 133 | 0 | 107 | 471 | 36 | 400 | 4.09e-171 | 487 |
| Msa0185490 | MtrunA17_Chr4g0035081 | 51.266 | 474 | 224 | 4 | 2 | 470 | 31 | 502 | 2.18e-170 | 489 |
| Msa0185490 | MtrunA17_Chr1g0209881 | 50.816 | 429 | 209 | 2 | 43 | 471 | 65 | 491 | 6.29e-159 | 459 |
| Msa0185490 | MtrunA17_Chr5g0423521 | 46.809 | 470 | 245 | 4 | 6 | 471 | 23 | 491 | 2.26e-154 | 448 |
| Msa0185490 | MtrunA17_Chr3g0136561 | 51.069 | 421 | 196 | 2 | 60 | 470 | 483 | 903 | 2.52e-154 | 461 |
| Msa0185490 | MtrunA17_Chr6g0461621 | 92.140 | 229 | 18 | 0 | 1 | 229 | 1 | 229 | 9.81e-153 | 434 |
| Msa0185490 | MtrunA17_Chr2g0277841 | 48.786 | 412 | 206 | 4 | 63 | 472 | 45 | 453 | 3.90e-140 | 410 |
| Msa0185490 | MtrunA17_Chr7g0250661 | 63.668 | 289 | 105 | 0 | 183 | 471 | 2 | 290 | 9.41e-140 | 403 |
| Msa0185490 | MtrunA17_Chr2g0295781 | 47.317 | 410 | 212 | 3 | 63 | 470 | 44 | 451 | 4.98e-130 | 384 |
| Msa0185490 | MtrunA17_Chr2g0282281 | 46.517 | 402 | 209 | 3 | 62 | 462 | 107 | 503 | 2.76e-127 | 379 |
| Msa0185490 | MtrunA17_Chr7g0276241 | 56.122 | 294 | 122 | 2 | 183 | 474 | 2 | 290 | 8.27e-119 | 350 |
| Msa0185490 | MtrunA17_Chr1g0204301 | 40.441 | 408 | 242 | 1 | 62 | 468 | 77 | 484 | 1.13e-104 | 320 |
| Msa0185490 | MtrunA17_Chr4g0026871 | 60.699 | 229 | 89 | 1 | 245 | 472 | 1 | 229 | 3.95e-100 | 300 |
| Msa0185490 | MtrunA17_Chr4g0030591 | 38.761 | 436 | 238 | 7 | 63 | 478 | 27 | 453 | 5.12e-98 | 303 |
| Msa0185490 | MtrunA17_Chr4g0030601 | 38.208 | 424 | 248 | 6 | 63 | 478 | 27 | 444 | 1.57e-95 | 296 |
| Msa0185490 | MtrunA17_Chr3g0115021 | 40.194 | 413 | 239 | 4 | 60 | 468 | 75 | 483 | 5.38e-95 | 295 |
| Msa0185490 | MtrunA17_Chr3g0115041 | 40.194 | 413 | 239 | 4 | 60 | 468 | 75 | 483 | 5.55e-95 | 295 |
| Msa0185490 | MtrunA17_Chr1g0212951 | 35.683 | 454 | 255 | 8 | 45 | 467 | 4 | 451 | 2.73e-93 | 291 |
| Msa0185490 | MtrunA17_Chr6g0469631 | 41.626 | 406 | 229 | 4 | 67 | 468 | 81 | 482 | 4.73e-93 | 290 |
| Msa0185490 | MtrunA17_Chr4g0030581 | 37.788 | 434 | 244 | 7 | 63 | 478 | 27 | 452 | 1.08e-92 | 289 |
| Msa0185490 | MtrunA17_Chr2g0327721 | 38.515 | 431 | 226 | 10 | 63 | 467 | 27 | 444 | 1.64e-92 | 289 |
| Msa0185490 | MtrunA17_Chr4g0026791 | 60.894 | 179 | 69 | 1 | 245 | 422 | 1 | 179 | 2.93e-74 | 231 |
| Msa0185490 | MtrunA17_Chr4g0026721 | 60.870 | 161 | 63 | 0 | 312 | 472 | 1 | 161 | 1.27e-67 | 214 |
| Msa0185490 | MtrunA17_Chr4g0026861 | 51.445 | 173 | 83 | 1 | 49 | 220 | 43 | 215 | 1.92e-56 | 186 |
| Msa0185490 | MtrunA17_Chr7g0250651 | 41.667 | 156 | 83 | 4 | 2 | 151 | 33 | 186 | 1.61e-29 | 114 |
| Msa0185490 | MtrunA17_Chr4g0026801 | 39.241 | 158 | 90 | 3 | 12 | 163 | 1 | 158 | 2.38e-28 | 110 |
| Msa0185490 | MtrunA17_Chr4g0040421 | 23.462 | 260 | 162 | 8 | 183 | 437 | 152 | 379 | 6.65e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185490 | AT1G04220.1 | 56.108 | 483 | 197 | 6 | 2 | 471 | 36 | 516 | 0.0 | 560 |
| Msa0185490 | AT2G26640.1 | 56.303 | 476 | 200 | 4 | 2 | 471 | 31 | 504 | 0.0 | 550 |
| Msa0185490 | AT5G43760.1 | 60.369 | 434 | 162 | 4 | 48 | 471 | 88 | 521 | 0.0 | 541 |
| Msa0185490 | AT2G16280.1 | 51.471 | 476 | 220 | 4 | 2 | 470 | 39 | 510 | 2.11e-174 | 500 |
| Msa0185490 | AT1G19440.1 | 51.261 | 476 | 221 | 4 | 2 | 470 | 43 | 514 | 5.00e-174 | 499 |
| Msa0185490 | AT4G34510.1 | 50.844 | 474 | 226 | 5 | 2 | 472 | 18 | 487 | 3.20e-172 | 493 |
| Msa0185490 | AT1G01120.1 | 53.162 | 427 | 190 | 2 | 52 | 468 | 98 | 524 | 1.31e-171 | 493 |
| Msa0185490 | AT2G46720.1 | 50.227 | 440 | 213 | 3 | 32 | 468 | 27 | 463 | 8.64e-165 | 474 |
| Msa0185490 | AT1G25450.1 | 48.529 | 476 | 236 | 4 | 2 | 471 | 15 | 487 | 2.23e-158 | 458 |
| Msa0185490 | AT3G10280.1 | 49.091 | 440 | 211 | 4 | 32 | 468 | 27 | 456 | 2.50e-157 | 454 |
| Msa0185490 | AT4G34250.1 | 48.649 | 481 | 230 | 6 | 6 | 473 | 14 | 490 | 8.10e-157 | 454 |
| Msa0185490 | AT1G68530.1 | 46.751 | 477 | 243 | 5 | 2 | 471 | 20 | 492 | 1.13e-156 | 454 |
| Msa0185490 | AT4G34520.1 | 52.459 | 427 | 190 | 4 | 55 | 470 | 66 | 490 | 2.71e-155 | 451 |
| Msa0185490 | AT2G15090.1 | 52.000 | 425 | 194 | 5 | 55 | 470 | 56 | 479 | 1.68e-154 | 448 |
| Msa0185490 | AT2G26250.1 | 43.976 | 498 | 250 | 2 | 2 | 470 | 53 | 550 | 2.27e-153 | 447 |
| Msa0185490 | AT1G71160.1 | 45.991 | 424 | 227 | 2 | 45 | 468 | 25 | 446 | 6.93e-135 | 397 |
| Msa0185490 | AT5G49070.1 | 45.154 | 423 | 228 | 3 | 51 | 471 | 36 | 456 | 1.14e-124 | 371 |
| Msa0185490 | AT3G52160.1 | 43.373 | 415 | 203 | 3 | 46 | 459 | 66 | 449 | 1.55e-117 | 353 |
| Msa0185490 | AT3G52160.2 | 45.604 | 364 | 167 | 2 | 96 | 459 | 4 | 336 | 8.33e-110 | 329 |
| Msa0185490 | AT2G28630.2 | 38.462 | 429 | 243 | 7 | 68 | 478 | 32 | 457 | 2.58e-100 | 309 |
| Msa0185490 | AT2G28630.1 | 38.462 | 429 | 243 | 7 | 68 | 478 | 32 | 457 | 2.58e-100 | 309 |
| Msa0185490 | AT1G07720.1 | 38.679 | 424 | 238 | 7 | 63 | 467 | 27 | 447 | 2.70e-97 | 301 |
| Msa0185490 | AT5G04530.1 | 40.326 | 429 | 231 | 10 | 56 | 467 | 17 | 437 | 2.97e-97 | 301 |
| Msa0185490 | AT1G07720.2 | 38.679 | 424 | 238 | 7 | 63 | 467 | 70 | 490 | 3.27e-97 | 303 |
| Msa0185490 | AT1G68530.2 | 48.387 | 279 | 142 | 1 | 49 | 327 | 73 | 349 | 5.63e-89 | 277 |
| Msa0185490 | AT5G49070.2 | 41.219 | 279 | 163 | 1 | 51 | 329 | 36 | 313 | 1.54e-65 | 214 |
| Msa0185490 | AT4G34850.2 | 25.306 | 245 | 145 | 9 | 201 | 436 | 91 | 306 | 4.44e-12 | 67.4 |
| Msa0185490 | AT4G34850.1 | 25.306 | 245 | 145 | 9 | 201 | 436 | 164 | 379 | 7.31e-12 | 67.4 |
Find 72 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATATGGCAAATGGCTTT+TGG | 0.246325 | 1_4:-75714145 | Msa0185490:CDS |
| GTTAATCATTATAAACTTAG+AGG | 0.259701 | 1_4:-75716814 | Msa0185490:CDS |
| TTGGATAGAGCAAAACATTT+TGG | 0.264127 | 1_4:-75717099 | Msa0185490:CDS |
| AGCACTAAAGCATATGAGTT+TGG | 0.291741 | 1_4:+75714763 | None:intergenic |
| TCCATTAGTCCTCCCAATTT+CGG | 0.294314 | 1_4:-75714443 | Msa0185490:CDS |
| GGAATTTCTAATAATGCTTC+AGG | 0.313917 | 1_4:+75717000 | None:intergenic |
| TCCGAAATTGGGAGGACTAA+TGG | 0.324601 | 1_4:+75714442 | None:intergenic |
| GTTCAATTCAACTACATAAC+TGG | 0.326614 | 1_4:+75713830 | None:intergenic |
| AGCTAAGGGGAGAGTTAAAA+AGG | 0.330815 | 1_4:-75714173 | Msa0185490:CDS |
| AGATTATTGATTATAATATT+CGG | 0.334053 | 1_4:-75713853 | Msa0185490:three_prime_UTR |
| AAAGTTGAAGCTAAAGATAT+TGG | 0.336152 | 1_4:-75716895 | Msa0185490:CDS |
| TGTGTCTAGAAAGAATAATT+AGG | 0.340619 | 1_4:-75713952 | Msa0185490:three_prime_UTR |
| TTGTTCATTGGCAATGGAAC+AGG | 0.342492 | 1_4:+75714025 | None:intergenic |
| TAACTTTCATGTCATGTTTG+TGG | 0.344699 | 1_4:-75713979 | Msa0185490:three_prime_UTR |
| TAGAAATGCTTCAACATTGT+TGG | 0.353388 | 1_4:+75717369 | None:intergenic |
| AACTTAAAATTCGGCATGTA+TGG | 0.357301 | 1_4:+75714361 | None:intergenic |
| TTAATCATATGTTTGTTCAT+TGG | 0.363214 | 1_4:+75714013 | None:intergenic |
| TTGCACAAAAGAAATGTTGT+TGG | 0.390520 | 1_4:-75717118 | Msa0185490:CDS |
| GATCTATAATCTTAGTGGTA+TGG | 0.390916 | 1_4:-75716782 | Msa0185490:CDS |
| GCACTAAAGCATATGAGTTT+GGG | 0.397910 | 1_4:+75714764 | None:intergenic |
| TACTAATTGTCTCTTTCGAA+TGG | 0.399551 | 1_4:-75714683 | Msa0185490:CDS |
| AATATCTTTAGCTTCAACTT+TGG | 0.416100 | 1_4:+75716897 | None:intergenic |
| TCGAACGCTAACTTAAAATT+CGG | 0.417831 | 1_4:+75714352 | None:intergenic |
| TTAAGGTTAATACTGCTGTT+TGG | 0.420779 | 1_4:-75714114 | Msa0185490:CDS |
| CTATATAGTGTCATTCTTGA+AGG | 0.424575 | 1_4:+75714247 | None:intergenic |
| ATCTATAATCTTAGTGGTAT+GGG | 0.428495 | 1_4:-75716781 | Msa0185490:CDS |
| TTTATCAATATTGATGGTTG+AGG | 0.454477 | 1_4:+75717246 | None:intergenic |
| TGTTGTTGAAAAGGATAGCT+AGG | 0.454589 | 1_4:+75717410 | None:intergenic |
| GTGTGTGAATGTTGTTGAAA+AGG | 0.454604 | 1_4:+75717401 | None:intergenic |
| GGGACATAAAATATGGCAAA+TGG | 0.457927 | 1_4:-75714152 | Msa0185490:CDS |
| ACTAATTGTCTCTTTCGAAT+GGG | 0.459375 | 1_4:-75714682 | Msa0185490:CDS |
| TCATCAAGTGTTAGTCTTGG+TGG | 0.459635 | 1_4:+75716979 | None:intergenic |
| AAATACCTCAAGAAGACGTT+TGG | 0.460466 | 1_4:+75716726 | None:intergenic |
| ACACATCATCAAGTTCTGTT+TGG | 0.465892 | 1_4:-75714216 | Msa0185490:CDS |
| CGATGGATGACTTGAGAGTA+GGG | 0.466110 | 1_4:+75714648 | None:intergenic |
| AGAATGACACTATATAGATA+TGG | 0.470646 | 1_4:-75714241 | Msa0185490:CDS |
| AGTGGTATGGGATGCAGTGC+TGG | 0.470681 | 1_4:-75716769 | Msa0185490:CDS |
| ATATGTTTGTTCATTGGCAA+TGG | 0.471516 | 1_4:+75714019 | None:intergenic |
| GCTTCATCAAGTGTTAGTCT+TGG | 0.477201 | 1_4:+75716976 | None:intergenic |
| TTCGAAAGAGACAATTAGTA+AGG | 0.478311 | 1_4:+75714686 | None:intergenic |
| ATTGTCTTATTGTGAAGCTA+AGG | 0.483820 | 1_4:-75714188 | Msa0185490:CDS |
| CATGAAAATGTAGTAAACTA+AGG | 0.486928 | 1_4:+75717203 | None:intergenic |
| TGTGACATGCAAAATCTACT+AGG | 0.521489 | 1_4:+75717160 | None:intergenic |
| TTTGAGCGGCTACGGTCCGA+TGG | 0.522197 | 1_4:+75714631 | None:intergenic |
| TTGTCTTATTGTGAAGCTAA+GGG | 0.526933 | 1_4:-75714187 | Msa0185490:CDS |
| CCGATGGATGACTTGAGAGT+AGG | 0.528757 | 1_4:+75714647 | None:intergenic |
| CAATTAGTAAGGATCATTGA+AGG | 0.529851 | 1_4:+75714697 | None:intergenic |
| TTAATCATTATAAACTTAGA+GGG | 0.529909 | 1_4:-75716813 | Msa0185490:CDS |
| AGGATCTCATGAATGTTGCT+AGG | 0.531519 | 1_4:-75714498 | Msa0185490:CDS |
| GCGGTAGAGCGGTTCTTGAT+CGG | 0.540567 | 1_4:-75714309 | Msa0185490:CDS |
| AATTGTCTCTTTCGAATGGG+TGG | 0.541404 | 1_4:-75714679 | Msa0185490:CDS |
| TGCTTCAGGAACATAAGTGA+TGG | 0.543655 | 1_4:+75717014 | None:intergenic |
| TAAAGATATTGGAATTCTTG+TGG | 0.557701 | 1_4:-75716884 | Msa0185490:CDS |
| GACTAACACTTGATGAAGCA+AGG | 0.570909 | 1_4:-75716972 | Msa0185490:CDS |
| GGATCTCATGAATGTTGCTA+GGG | 0.577726 | 1_4:-75714497 | Msa0185490:CDS |
| TCTCTTTCGAATGGGTGGAT+CGG | 0.581140 | 1_4:-75714674 | Msa0185490:CDS |
| GTAGTAGCTACATCATGTGT+AGG | 0.584328 | 1_4:-75717300 | Msa0185490:CDS |
| AATTAGTAAGGATCATTGAA+GGG | 0.585870 | 1_4:+75714698 | None:intergenic |
| CAGTGCTGGTGTTATTGCAG+TGG | 0.587920 | 1_4:-75716755 | Msa0185490:CDS |
| TGTTCATTGGCAATGGAACA+GGG | 0.590457 | 1_4:+75714026 | None:intergenic |
| CTTTGCCAAACGTCTTCTTG+AGG | 0.595847 | 1_4:-75716731 | Msa0185490:intron |
| CATGCATACGGGCGGTAGAG+CGG | 0.599254 | 1_4:-75714320 | Msa0185490:CDS |
| GCTTCAGGAACATAAGTGAT+GGG | 0.600651 | 1_4:+75717015 | None:intergenic |
| ACAATAGTATCTGAAAGTGA+TGG | 0.605880 | 1_4:+75716835 | None:intergenic |
| GTTGTTGAAAAGGATAGCTA+GGG | 0.606417 | 1_4:+75717411 | None:intergenic |
| GTATCTGAAAGTGATGGTGT+AGG | 0.606742 | 1_4:+75716841 | None:intergenic |
| ACTCGGTGTTAAACTATCGA+AGG | 0.617292 | 1_4:-75714518 | Msa0185490:CDS |
| TGTCTTATTGTGAAGCTAAG+GGG | 0.629341 | 1_4:-75714186 | Msa0185490:CDS |
| CGTACACACATAACATCGCT+CGG | 0.629342 | 1_4:-75714466 | Msa0185490:CDS |
| CCTACTCTCAAGTCATCCAT+CGG | 0.642889 | 1_4:-75714647 | Msa0185490:CDS |
| CAAATCTCAAGCATATACAA+AGG | 0.644919 | 1_4:-75714727 | Msa0185490:CDS |
| CATTCGTTGCGCACTCACGT+AGG | 0.677333 | 1_4:-75714595 | Msa0185490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAATTATAAAAGAG+TGG | - | chr1_4:75715130-75715149 | Msa0185490:intron | 10.0% |
| !! | TAAAAAAATTATAAAAGAGT+GGG | - | chr1_4:75715131-75715150 | Msa0185490:intron | 10.0% |
| !!! | ATGTATATGTTATTTTTTTT+CGG | + | chr1_4:75715682-75715701 | None:intergenic | 10.0% |
| !!! | TTATTTTTGTTTTTTTTTGT+TGG | + | chr1_4:75716085-75716104 | None:intergenic | 10.0% |
| !!! | AGATTATTGATTATAATATT+CGG | - | chr1_4:75717360-75717379 | Msa0185490:CDS | 10.0% |
| !!! | AATGATTTTATCAATATTGA+TGG | + | chr1_4:75713976-75713995 | None:intergenic | 15.0% |
| !! | TTAATCATTATAAACTTAGA+GGG | - | chr1_4:75714400-75714419 | Msa0185490:CDS | 15.0% |
| !!! | AAAGAGTACAAAATTATTTA+AGG | - | chr1_4:75714574-75714593 | Msa0185490:CDS | 15.0% |
| !! | AAAAAAAAAATGAAAATGTC+TGG | + | chr1_4:75714724-75714743 | None:intergenic | 15.0% |
| !!! | TATTTTATCTAAAAGGTTAT+TGG | - | chr1_4:75714952-75714971 | Msa0185490:intron | 15.0% |
| !!! | CTATTTTTCTTTTTCTTTTT+TGG | + | chr1_4:75715506-75715525 | None:intergenic | 15.0% |
| !! | TTATATGAGAAAACAATATA+TGG | + | chr1_4:75715918-75715937 | None:intergenic | 15.0% |
| !!! | ATATTGTTTTCTCATATAAT+TGG | - | chr1_4:75715919-75715938 | Msa0185490:intron | 15.0% |
| !!! | GTTTGTTAAATTTATTTGTA+GGG | + | chr1_4:75716343-75716362 | None:intergenic | 15.0% |
| !!! | TGTTTGTTAAATTTATTTGT+AGG | + | chr1_4:75716344-75716363 | None:intergenic | 15.0% |
| !!! | TGATTCATAAGATTTTAGAA+AGG | - | chr1_4:75714163-75714182 | Msa0185490:CDS | 20.0% |
| !!! | GAATCAAATTTAGTTCTTTT+TGG | - | chr1_4:75714267-75714286 | Msa0185490:CDS | 20.0% |
| !! | GTTAATCATTATAAACTTAG+AGG | - | chr1_4:75714399-75714418 | Msa0185490:CDS | 20.0% |
| !!! | ATTTTGATCTATAATCTTAG+TGG | - | chr1_4:75714426-75714445 | Msa0185490:CDS | 20.0% |
| !!! | ACTATTTTATACTTGTTTGT+TGG | - | chr1_4:75714635-75714654 | Msa0185490:CDS | 20.0% |
| !! | CCTCTAGTATTAAAATATTT+GGG | + | chr1_4:75714773-75714792 | None:intergenic | 20.0% |
| !! | ACCTCTAGTATTAAAATATT+TGG | + | chr1_4:75714774-75714793 | None:intergenic | 20.0% |
| !! | AACTATATGAAATTGATGAA+TGG | + | chr1_4:75715014-75715033 | None:intergenic | 20.0% |
| !!! | CTGCTATTAATTTTTTTTGA+AGG | + | chr1_4:75715076-75715095 | None:intergenic | 20.0% |
| !! | GAGATATCAATATGTATTTA+TGG | - | chr1_4:75715095-75715114 | Msa0185490:intron | 20.0% |
| !!! | TCGGTTTTAGTTTTTTTTTT+TGG | - | chr1_4:75715213-75715232 | Msa0185490:intron | 20.0% |
| !! | GTTATTTACATATAGCAAAA+GGG | - | chr1_4:75715235-75715254 | Msa0185490:intron | 20.0% |
| !!! | ACAAATAAAAAAAGTGTAGT+TGG | - | chr1_4:75715373-75715392 | Msa0185490:intron | 20.0% |
| !! | AAAATAAAATATGCAAGATC+CGG | - | chr1_4:75715636-75715655 | Msa0185490:intron | 20.0% |
| !!! | AAGAGTTTTGCTATTTATTA+TGG | - | chr1_4:75715740-75715759 | Msa0185490:intron | 20.0% |
| !! | TTAAAAATGTTCTCATATAG+TGG | + | chr1_4:75715879-75715898 | None:intergenic | 20.0% |
| !! | CAGAATCTTTAATTCAATAA+TGG | + | chr1_4:75716027-75716046 | None:intergenic | 20.0% |
| !! | ATAATCAAGCTTAATTAGTT+AGG | + | chr1_4:75716405-75716424 | None:intergenic | 20.0% |
| !! | TTAAAAAGGGACATAAAATA+TGG | - | chr1_4:75717054-75717073 | Msa0185490:CDS | 20.0% |
| !! | TTAATCATATGTTTGTTCAT+TGG | + | chr1_4:75717203-75717222 | None:intergenic | 20.0% |
| !! | TTTATCAATATTGATGGTTG+AGG | + | chr1_4:75713970-75713989 | None:intergenic | 25.0% |
| ! | CATGAAAATGTAGTAAACTA+AGG | + | chr1_4:75714013-75714032 | None:intergenic | 25.0% |
| !! | TCTACTAGGTATATTTTGTT+TGG | + | chr1_4:75714042-75714061 | None:intergenic | 25.0% |
| !!! | GTGCAAATACAATTGTTTTT+TGG | + | chr1_4:75714081-75714100 | None:intergenic | 25.0% |
| !! | AATATCTTTAGCTTCAACTT+TGG | + | chr1_4:75714319-75714338 | None:intergenic | 25.0% |
| ! | AAAGTTGAAGCTAAAGATAT+TGG | - | chr1_4:75714318-75714337 | Msa0185490:CDS | 25.0% |
| ! | TAAAGATATTGGAATTCTTG+TGG | - | chr1_4:75714329-75714348 | Msa0185490:CDS | 25.0% |
| ! | ATCTATAATCTTAGTGGTAT+GGG | - | chr1_4:75714432-75714451 | Msa0185490:CDS | 25.0% |
| !!! | CCCAAATATTTTAATACTAG+AGG | - | chr1_4:75714770-75714789 | Msa0185490:CDS | 25.0% |
| ! | GGTTATTTACATATAGCAAA+AGG | - | chr1_4:75715234-75715253 | Msa0185490:intron | 25.0% |
| !! | CATTAGCTGTATTAATTTGA+AGG | - | chr1_4:75715415-75715434 | Msa0185490:intron | 25.0% |
| ! | AAATAAAATATGCAAGATCC+GGG | - | chr1_4:75715637-75715656 | Msa0185490:intron | 25.0% |
| !!! | ATGTTATTTTTTTTCGGTAG+TGG | + | chr1_4:75715676-75715695 | None:intergenic | 25.0% |
| !!! | ATACTGGAAGATACTTTTTT+TGG | + | chr1_4:75715946-75715965 | None:intergenic | 25.0% |
| ! | TATTTATGACATGCAATTAC+AGG | - | chr1_4:75716422-75716441 | Msa0185490:intron | 25.0% |
| ! | AATTAGTAAGGATCATTGAA+GGG | + | chr1_4:75716518-75716537 | None:intergenic | 25.0% |
| ! | ATGTGAAAAATTTAGTTGAG+AGG | - | chr1_4:75716805-75716824 | Msa0185490:CDS | 25.0% |
| ! | AGAATGACACTATATAGATA+TGG | - | chr1_4:75716972-75716991 | Msa0185490:CDS | 25.0% |
| !!! | CAAGCATTTTTCAATGATTT+AGG | + | chr1_4:75717146-75717165 | None:intergenic | 25.0% |
| ! | CTAAATCATTGAAAAATGCT+TGG | - | chr1_4:75717144-75717163 | Msa0185490:CDS | 25.0% |
| ! | TGTGTCTAGAAAGAATAATT+AGG | - | chr1_4:75717261-75717280 | Msa0185490:CDS | 25.0% |
| TAGAAATGCTTCAACATTGT+TGG | + | chr1_4:75713847-75713866 | None:intergenic | 30.0% | |
| TTGCACAAAAGAAATGTTGT+TGG | - | chr1_4:75714095-75714114 | Msa0185490:CDS | 30.0% | |
| ! | TTGGATAGAGCAAAACATTT+TGG | - | chr1_4:75714114-75714133 | Msa0185490:CDS | 30.0% |
| !! | CATAAGATTTTAGAAAGGTC+AGG | - | chr1_4:75714168-75714187 | Msa0185490:CDS | 30.0% |
| GGAATTTCTAATAATGCTTC+AGG | + | chr1_4:75714216-75714235 | None:intergenic | 30.0% | |
| ACAATAGTATCTGAAAGTGA+TGG | + | chr1_4:75714381-75714400 | None:intergenic | 30.0% | |
| GATCTATAATCTTAGTGGTA+TGG | - | chr1_4:75714431-75714450 | Msa0185490:CDS | 30.0% | |
| ! | TGATATTGCTTCTTGTTTGT+CGG | - | chr1_4:75714611-75714630 | Msa0185490:CDS | 30.0% |
| AAAATATTTGGGTCTCTCAA+TGG | + | chr1_4:75714762-75714781 | None:intergenic | 30.0% | |
| AATAAAATATGCAAGATCCG+GGG | - | chr1_4:75715638-75715657 | Msa0185490:intron | 30.0% | |
| GTGTGAATTTGTATCATTTG+CGG | + | chr1_4:75715806-75715825 | None:intergenic | 30.0% | |
| CAAATCTCAAGCATATACAA+AGG | - | chr1_4:75716486-75716505 | Msa0185490:intron | 30.0% | |
| CAATTAGTAAGGATCATTGA+AGG | + | chr1_4:75716519-75716538 | None:intergenic | 30.0% | |
| TTCGAAAGAGACAATTAGTA+AGG | + | chr1_4:75716530-75716549 | None:intergenic | 30.0% | |
| TACTAATTGTCTCTTTCGAA+TGG | - | chr1_4:75716530-75716549 | Msa0185490:intron | 30.0% | |
| ACTAATTGTCTCTTTCGAAT+GGG | - | chr1_4:75716531-75716550 | Msa0185490:intron | 30.0% | |
| GAAGACGAAAAAGAAATACT+CGG | - | chr1_4:75716678-75716697 | Msa0185490:intron | 30.0% | |
| ! | ACTTGAGTTTTTCCGAAATT+GGG | + | chr1_4:75716785-75716804 | None:intergenic | 30.0% |
| ! | TACTTGAGTTTTTCCGAAAT+TGG | + | chr1_4:75716786-75716805 | None:intergenic | 30.0% |
| AACTTAAAATTCGGCATGTA+TGG | + | chr1_4:75716855-75716874 | None:intergenic | 30.0% | |
| TCGAACGCTAACTTAAAATT+CGG | + | chr1_4:75716864-75716883 | None:intergenic | 30.0% | |
| !! | TGAGCTTGATGATTTTCATA+TGG | - | chr1_4:75716941-75716960 | Msa0185490:CDS | 30.0% |
| ! | CTATATAGTGTCATTCTTGA+AGG | + | chr1_4:75716969-75716988 | None:intergenic | 30.0% |
| ! | ATTGTCTTATTGTGAAGCTA+AGG | - | chr1_4:75717025-75717044 | Msa0185490:CDS | 30.0% |
| ! | TTGTCTTATTGTGAAGCTAA+GGG | - | chr1_4:75717026-75717045 | Msa0185490:CDS | 30.0% |
| ! | AAAATATGGCAAATGGCTTT+TGG | - | chr1_4:75717068-75717087 | Msa0185490:CDS | 30.0% |
| TTAAGGTTAATACTGCTGTT+TGG | - | chr1_4:75717099-75717118 | Msa0185490:CDS | 30.0% | |
| ATCATTGAAAAATGCTTGGA+TGG | - | chr1_4:75717148-75717167 | Msa0185490:CDS | 30.0% | |
| ATATGTTTGTTCATTGGCAA+TGG | + | chr1_4:75717197-75717216 | None:intergenic | 30.0% | |
| TAACTTTCATGTCATGTTTG+TGG | - | chr1_4:75717234-75717253 | Msa0185490:CDS | 30.0% | |
| GTTCAATTCAACTACATAAC+TGG | + | chr1_4:75717386-75717405 | None:intergenic | 30.0% | |
| GTTGTTGAAAAGGATAGCTA+GGG | + | chr1_4:75713805-75713824 | None:intergenic | 35.0% | |
| TGTTGTTGAAAAGGATAGCT+AGG | + | chr1_4:75713806-75713825 | None:intergenic | 35.0% | |
| GTGTGTGAATGTTGTTGAAA+AGG | + | chr1_4:75713815-75713834 | None:intergenic | 35.0% | |
| TGTGACATGCAAAATCTACT+AGG | + | chr1_4:75714056-75714075 | None:intergenic | 35.0% | |
| !! | ATTTTAGAAAGGTCAGGTGT+GGG | - | chr1_4:75714174-75714193 | Msa0185490:CDS | 35.0% |
| AAATACCTCAAGAAGACGTT+TGG | + | chr1_4:75714490-75714509 | None:intergenic | 35.0% | |
| !!! | TATTTTTTTTCGGTAGTGGC+CGG | + | chr1_4:75715672-75715691 | None:intergenic | 35.0% |
| TAGTGGTGAAATAGATACAG+TGG | + | chr1_4:75715862-75715881 | None:intergenic | 35.0% | |
| GTTTCACTGTCAATCATCAT+AGG | - | chr1_4:75716000-75716019 | Msa0185490:intron | 35.0% | |
| TGTGCTAAGCTCACTTATTA+AGG | + | chr1_4:75716317-75716336 | None:intergenic | 35.0% | |
| CAAATTACATGTAGCTAGCA+AGG | + | chr1_4:75716380-75716399 | None:intergenic | 35.0% | |
| GCACTAAAGCATATGAGTTT+GGG | + | chr1_4:75716452-75716471 | None:intergenic | 35.0% | |
| AGCACTAAAGCATATGAGTT+TGG | + | chr1_4:75716453-75716472 | None:intergenic | 35.0% | |
| !! | GCATCAACTGATATTTTGAG+CGG | + | chr1_4:75716599-75716618 | None:intergenic | 35.0% |
| ! | CGATCAATTTTGCATGCATA+CGG | - | chr1_4:75716881-75716900 | Msa0185490:CDS | 35.0% |
| ! | GATCAATTTTGCATGCATAC+GGG | - | chr1_4:75716882-75716901 | Msa0185490:CDS | 35.0% |
| ACACATCATCAAGTTCTGTT+TGG | - | chr1_4:75716997-75717016 | Msa0185490:CDS | 35.0% | |
| ! | TGTCTTATTGTGAAGCTAAG+GGG | - | chr1_4:75717027-75717046 | Msa0185490:CDS | 35.0% |
| GGGACATAAAATATGGCAAA+TGG | - | chr1_4:75717061-75717080 | Msa0185490:CDS | 35.0% | |
| GTAGTAGCTACATCATGTGT+AGG | - | chr1_4:75713913-75713932 | Msa0185490:three_prime_UTR | 40.0% | |
| !! | GATTTTAGAAAGGTCAGGTG+TGG | - | chr1_4:75714173-75714192 | Msa0185490:CDS | 40.0% |
| GCTTCAGGAACATAAGTGAT+GGG | + | chr1_4:75714201-75714220 | None:intergenic | 40.0% | |
| TGCTTCAGGAACATAAGTGA+TGG | + | chr1_4:75714202-75714221 | None:intergenic | 40.0% | |
| !! | TCATCAAGTGTTAGTCTTGG+TGG | + | chr1_4:75714237-75714256 | None:intergenic | 40.0% |
| ! | GCTTCATCAAGTGTTAGTCT+TGG | + | chr1_4:75714240-75714259 | None:intergenic | 40.0% |
| GACTAACACTTGATGAAGCA+AGG | - | chr1_4:75714241-75714260 | Msa0185490:CDS | 40.0% | |
| ! | GTATCTGAAAGTGATGGTGT+AGG | + | chr1_4:75714375-75714394 | None:intergenic | 40.0% |
| ACCTTAGTCCTACTCAGATA+CGG | + | chr1_4:75715190-75715209 | None:intergenic | 40.0% | |
| TGAGTAGGACTAAGGTAGTT+CGG | - | chr1_4:75715194-75715213 | Msa0185490:intron | 40.0% | |
| ! | TGAGTTTAGCTCAGTTGGTT+GGG | - | chr1_4:75715604-75715623 | Msa0185490:intron | 40.0% |
| !!! | ATTTTTTTTCGGTAGTGGCC+GGG | + | chr1_4:75715671-75715690 | None:intergenic | 40.0% |
| CTGTGACTGAACACATATAC+TGG | + | chr1_4:75715962-75715981 | None:intergenic | 40.0% | |
| AATTGTCTCTTTCGAATGGG+TGG | - | chr1_4:75716534-75716553 | Msa0185490:intron | 40.0% | |
| !! | ACTGATATTTTGAGCGGCTA+CGG | + | chr1_4:75716593-75716612 | None:intergenic | 40.0% |
| !! | ACTCGGTGTTAAACTATCGA+AGG | - | chr1_4:75716695-75716714 | Msa0185490:intron | 40.0% |
| AGGATCTCATGAATGTTGCT+AGG | - | chr1_4:75716715-75716734 | Msa0185490:intron | 40.0% | |
| GGATCTCATGAATGTTGCTA+GGG | - | chr1_4:75716716-75716735 | Msa0185490:intron | 40.0% | |
| TCCATTAGTCCTCCCAATTT+CGG | - | chr1_4:75716770-75716789 | Msa0185490:CDS | 40.0% | |
| ! | TGAGTTTTTCCGAAATTGGG+AGG | + | chr1_4:75716782-75716801 | None:intergenic | 40.0% |
| AGCTAAGGGGAGAGTTAAAA+AGG | - | chr1_4:75717040-75717059 | Msa0185490:CDS | 40.0% | |
| GCTAAGGGGAGAGTTAAAAA+GGG | - | chr1_4:75717041-75717060 | Msa0185490:CDS | 40.0% | |
| ! | GGCTTTTGGATCTGGATTTA+AGG | - | chr1_4:75717082-75717101 | Msa0185490:CDS | 40.0% |
| TGTTCATTGGCAATGGAACA+GGG | + | chr1_4:75717190-75717209 | None:intergenic | 40.0% | |
| TTGTTCATTGGCAATGGAAC+AGG | + | chr1_4:75717191-75717210 | None:intergenic | 40.0% | |
| CTTTGCCAAACGTCTTCTTG+AGG | - | chr1_4:75714482-75714501 | Msa0185490:CDS | 45.0% | |
| CCTTAGTCCTACTCAGATAC+GGG | + | chr1_4:75715189-75715208 | None:intergenic | 45.0% | |
| ! | GTGAGTTTAGCTCAGTTGGT+TGG | - | chr1_4:75715603-75715622 | Msa0185490:intron | 45.0% |
| !!! | TTTTTTTTCGGTAGTGGCCG+GGG | + | chr1_4:75715670-75715689 | None:intergenic | 45.0% |
| TCTCTTTCGAATGGGTGGAT+CGG | - | chr1_4:75716539-75716558 | Msa0185490:intron | 45.0% | |
| CGATGGATGACTTGAGAGTA+GGG | + | chr1_4:75716568-75716587 | None:intergenic | 45.0% | |
| CCTACTCTCAAGTCATCCAT+CGG | - | chr1_4:75716566-75716585 | Msa0185490:intron | 45.0% | |
| CGTACACACATAACATCGCT+CGG | - | chr1_4:75716747-75716766 | Msa0185490:CDS | 45.0% | |
| TCCGAAATTGGGAGGACTAA+TGG | + | chr1_4:75716774-75716793 | None:intergenic | 45.0% | |
| ! | CAATTTTGCATGCATACGGG+CGG | - | chr1_4:75716885-75716904 | Msa0185490:CDS | 45.0% |
| ! | TGGCAAATGGCTTTTGGATC+TGG | - | chr1_4:75717074-75717093 | Msa0185490:CDS | 45.0% |
| !!! | ATATTTTTATTTTATCTAAA+AGG | - | chr1_4:75714945-75714964 | Msa0185490:intron | 5.0% |
| !!! | TTTTTTATTTGTATAAATTT+GGG | + | chr1_4:75715365-75715384 | None:intergenic | 5.0% |
| !!! | TTTTTTTATTTGTATAAATT+TGG | + | chr1_4:75715366-75715385 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTTTTATAATTGA+TGG | - | chr1_4:75716189-75716208 | Msa0185490:intron | 5.0% |
| !! | CAGTGCTGGTGTTATTGCAG+TGG | - | chr1_4:75714458-75714477 | Msa0185490:CDS | 50.0% |
| ACCCTCAAGCTCCAACCTAT+AGG | - | chr1_4:75715163-75715182 | Msa0185490:intron | 50.0% | |
| ! | GCCTATAGGTTGGAGCTTGA+GGG | + | chr1_4:75715167-75715186 | None:intergenic | 50.0% |
| TCAGATACGGGCCTATAGGT+TGG | + | chr1_4:75715177-75715196 | None:intergenic | 50.0% | |
| CTACTCAGATACGGGCCTAT+AGG | + | chr1_4:75715181-75715200 | None:intergenic | 50.0% | |
| CTATAGGCCCGTATCTGAGT+AGG | - | chr1_4:75715179-75715198 | Msa0185490:intron | 50.0% | |
| CCCGTATCTGAGTAGGACTA+AGG | - | chr1_4:75715186-75715205 | Msa0185490:intron | 50.0% | |
| CCAACTGAGCTAAACTCACG+AGG | + | chr1_4:75715602-75715621 | None:intergenic | 50.0% | |
| ! | CCTCGTGAGTTTAGCTCAGT+TGG | - | chr1_4:75715599-75715618 | Msa0185490:intron | 50.0% |
| CCGATGGATGACTTGAGAGT+AGG | + | chr1_4:75716569-75716588 | None:intergenic | 50.0% | |
| AGTGGTATGGGATGCAGTGC+TGG | - | chr1_4:75714444-75714463 | Msa0185490:CDS | 55.0% | |
| ! | GGCCTATAGGTTGGAGCTTG+AGG | + | chr1_4:75715168-75715187 | None:intergenic | 55.0% |
| AAGATCCGGGGTTCAAACCC+CGG | - | chr1_4:75715650-75715669 | Msa0185490:intron | 55.0% | |
| CATTCGTTGCGCACTCACGT+AGG | - | chr1_4:75716618-75716637 | Msa0185490:intron | 55.0% | |
| GCGGTAGAGCGGTTCTTGAT+CGG | - | chr1_4:75716904-75716923 | Msa0185490:CDS | 55.0% | |
| TTTGAGCGGCTACGGTCCGA+TGG | + | chr1_4:75716585-75716604 | None:intergenic | 60.0% | |
| CATGCATACGGGCGGTAGAG+CGG | - | chr1_4:75716893-75716912 | Msa0185490:CDS | 60.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | + | chr1_4:75715658-75715677 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 75713797 | 75717438 | 75713797 | ID=Msa0185490;Name=Msa0185490 |
| chr1_4 | mRNA | 75713797 | 75717438 | 75713797 | ID=Msa0185490-mRNA-1;Parent=Msa0185490;Name=Msa0185490-mRNA-1;_AED=0.03;_eAED=0.03;_QI=53|1|1|1|1|1|2|209|479 |
| chr1_4 | exon | 75713797 | 75714791 | 75713797 | ID=Msa0185490-mRNA-1:exon:25831;Parent=Msa0185490-mRNA-1 |
| chr1_4 | exon | 75716732 | 75717438 | 75716732 | ID=Msa0185490-mRNA-1:exon:25830;Parent=Msa0185490-mRNA-1 |
| chr1_4 | five_prime_UTR | 75717386 | 75717438 | 75717386 | ID=Msa0185490-mRNA-1:five_prime_utr;Parent=Msa0185490-mRNA-1 |
| chr1_4 | CDS | 75716732 | 75717385 | 75716732 | ID=Msa0185490-mRNA-1:cds;Parent=Msa0185490-mRNA-1 |
| chr1_4 | CDS | 75714006 | 75714791 | 75714006 | ID=Msa0185490-mRNA-1:cds;Parent=Msa0185490-mRNA-1 |
| chr1_4 | three_prime_UTR | 75713797 | 75714005 | 75713797 | ID=Msa0185490-mRNA-1:three_prime_utr;Parent=Msa0185490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
