Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307190 | sp|U3MMQ4|TAC1_PRUPE | 46.479 | 71 | 35 | 2 | 1 | 70 | 200 | 268 | 2.87e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307190 | A0A396GE58 | 97.753 | 89 | 2 | 0 | 2 | 90 | 164 | 252 | 5.10e-53 | 175 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005050 | Msa1307190 | 0.830799 | 2.395696e-55 | -8.615850e-47 |
| Msa0016120 | Msa1307190 | 0.835870 | 1.304623e-56 | -8.615850e-47 |
| Msa0017510 | Msa1307190 | 0.806872 | 6.659631e-50 | -8.615850e-47 |
| Msa0022640 | Msa1307190 | 0.829898 | 3.978912e-55 | -8.615850e-47 |
| Msa0036430 | Msa1307190 | 0.807839 | 4.154667e-50 | -8.615850e-47 |
| Msa0043210 | Msa1307190 | 0.802204 | 6.267133e-49 | -8.615850e-47 |
| Msa0048200 | Msa1307190 | 0.815265 | 1.010253e-51 | -8.615850e-47 |
| Msa0050040 | Msa1307190 | 0.831611 | 1.513406e-55 | -8.615850e-47 |
| Msa0053110 | Msa1307190 | 0.834172 | 3.494241e-56 | -8.615850e-47 |
| Msa0072810 | Msa1307190 | 0.814928 | 1.199995e-51 | -8.615850e-47 |
| Msa0079770 | Msa1307190 | 0.814654 | 1.379722e-51 | -8.615850e-47 |
| Msa0080990 | Msa1307190 | 0.823232 | 1.547269e-53 | -8.615850e-47 |
| Msa0084000 | Msa1307190 | 0.833087 | 6.522830e-56 | -8.615850e-47 |
| Msa0084500 | Msa1307190 | 0.817755 | 2.796814e-52 | -8.615850e-47 |
| Msa0098440 | Msa1307190 | 0.835756 | 1.394475e-56 | -8.615850e-47 |
| Msa0102990 | Msa1307190 | 0.831512 | 1.600956e-55 | -8.615850e-47 |
| Msa0103000 | Msa1307190 | 0.841256 | 5.306642e-58 | -8.615850e-47 |
| Msa0106790 | Msa1307190 | 0.814232 | 1.710598e-51 | -8.615850e-47 |
| Msa0109880 | Msa1307190 | 0.830429 | 2.952099e-55 | -8.615850e-47 |
| Msa0110970 | Msa1307190 | 0.813020 | 3.161988e-51 | -8.615850e-47 |
| Msa0118400 | Msa1307190 | 0.825953 | 3.537649e-54 | -8.615850e-47 |
| Msa0625890 | Msa1307190 | 0.814092 | 1.836779e-51 | -8.615850e-47 |
| Msa0641250 | Msa1307190 | 0.819140 | 1.357838e-52 | -8.615850e-47 |
| Msa0641620 | Msa1307190 | 0.836908 | 7.101493e-57 | -8.615850e-47 |
| Msa0663590 | Msa1307190 | 0.816599 | 5.089073e-52 | -8.615850e-47 |
| Msa0663680 | Msa1307190 | 0.820168 | 7.911524e-53 | -8.615850e-47 |
| Msa0666210 | Msa1307190 | 0.828371 | 9.328597e-55 | -8.615850e-47 |
| Msa0669840 | Msa1307190 | 0.828890 | 6.990591e-55 | -8.615850e-47 |
| Msa0678890 | Msa1307190 | 0.806790 | 6.932298e-50 | -8.615850e-47 |
| Msa0680150 | Msa1307190 | 0.849248 | 3.653759e-60 | -8.615850e-47 |
| Msa0688500 | Msa1307190 | 0.811745 | 6.003473e-51 | -8.615850e-47 |
| Msa0691160 | Msa1307190 | 0.819029 | 1.439237e-52 | -8.615850e-47 |
| Msa0707220 | Msa1307190 | 0.800579 | 1.349024e-48 | -8.615850e-47 |
| Msa0716760 | Msa1307190 | 0.808935 | 2.424677e-50 | -8.615850e-47 |
| Msa0720040 | Msa1307190 | 0.816742 | 4.726541e-52 | -8.615850e-47 |
| Msa0723150 | Msa1307190 | 0.800815 | 1.207412e-48 | -8.615850e-47 |
| Msa0737190 | Msa1307190 | 0.829325 | 5.482706e-55 | -8.615850e-47 |
| Msa0739430 | Msa1307190 | 0.803935 | 2.749127e-49 | -8.615850e-47 |
| Msa0739580 | Msa1307190 | 0.834338 | 3.175354e-56 | -8.615850e-47 |
| Msa0747780 | Msa1307190 | 0.839998 | 1.132862e-57 | -8.615850e-47 |
| Msa0748000 | Msa1307190 | 0.822696 | 2.063731e-53 | -8.615850e-47 |
| Msa0754030 | Msa1307190 | 0.846382 | 2.249851e-59 | -8.615850e-47 |
| Msa0761580 | Msa1307190 | 0.828626 | 8.098268e-55 | -8.615850e-47 |
| Msa0764820 | Msa1307190 | 0.801342 | 9.422863e-49 | -8.615850e-47 |
| Msa0770290 | Msa1307190 | 0.800138 | 1.658634e-48 | -8.615850e-47 |
| Msa0778930 | Msa1307190 | 0.854321 | 1.330870e-61 | -8.615850e-47 |
| Msa0782360 | Msa1307190 | 0.808136 | 3.592291e-50 | -8.615850e-47 |
| Msa0807110 | Msa1307190 | 0.842403 | 2.642424e-58 | -8.615850e-47 |
| Msa0816450 | Msa1307190 | 0.851825 | 6.894766e-61 | -8.615850e-47 |
| Msa0828830 | Msa1307190 | 0.818662 | 1.743666e-52 | -8.615850e-47 |
| Msa0833040 | Msa1307190 | 0.846935 | 1.588779e-59 | -8.615850e-47 |
| Msa0840500 | Msa1307190 | 0.807303 | 5.398084e-50 | -8.615850e-47 |
| Msa0127440 | Msa1307190 | 0.810870 | 9.294342e-51 | -8.615850e-47 |
| Msa0130010 | Msa1307190 | 0.830268 | 3.230745e-55 | -8.615850e-47 |
| Msa0130160 | Msa1307190 | 0.816148 | 6.422177e-52 | -8.615850e-47 |
| Msa0130570 | Msa1307190 | 0.814566 | 1.443372e-51 | -8.615850e-47 |
| Msa0137150 | Msa1307190 | 0.802654 | 5.063374e-49 | -8.615850e-47 |
| Msa0141600 | Msa1307190 | 0.813637 | 2.314483e-51 | -8.615850e-47 |
| Msa0147560 | Msa1307190 | 0.860623 | 1.815747e-63 | -8.615850e-47 |
| Msa0147600 | Msa1307190 | 0.812007 | 5.265331e-51 | -8.615850e-47 |
| Msa0156250 | Msa1307190 | 0.842569 | 2.386689e-58 | -8.615850e-47 |
| Msa0157290 | Msa1307190 | 0.807734 | 4.373817e-50 | -8.615850e-47 |
| Msa0161680 | Msa1307190 | 0.832680 | 8.234957e-56 | -8.615850e-47 |
| Msa0176470 | Msa1307190 | 0.805365 | 1.382910e-49 | -8.615850e-47 |
| Msa0197230 | Msa1307190 | 0.833409 | 5.423157e-56 | -8.615850e-47 |
| Msa0203030 | Msa1307190 | 0.824066 | 9.872729e-54 | -8.615850e-47 |
| Msa0212150 | Msa1307190 | 0.825167 | 5.432585e-54 | -8.615850e-47 |
| Msa0218780 | Msa1307190 | 0.812488 | 4.133652e-51 | -8.615850e-47 |
| Msa0219190 | Msa1307190 | 0.853983 | 1.665059e-61 | -8.615850e-47 |
| Msa0236110 | Msa1307190 | 0.804406 | 2.193657e-49 | -8.615850e-47 |
| Msa1227950 | Msa1307190 | 0.804933 | 1.702938e-49 | -8.615850e-47 |
| Msa1228190 | Msa1307190 | 0.829915 | 3.939348e-55 | -8.615850e-47 |
| Msa1228210 | Msa1307190 | 0.800205 | 1.607403e-48 | -8.615850e-47 |
| Msa1228610 | Msa1307190 | 0.844524 | 7.166017e-59 | -8.615850e-47 |
| Msa1228980 | Msa1307190 | 0.806650 | 7.420105e-50 | -8.615850e-47 |
| Msa1232730 | Msa1307190 | 0.802938 | 4.423545e-49 | -8.615850e-47 |
| Msa1233560 | Msa1307190 | 0.802770 | 4.791590e-49 | -8.615850e-47 |
| Msa1256500 | Msa1307190 | 0.839849 | 1.238993e-57 | -8.615850e-47 |
| Msa1271260 | Msa1307190 | 0.813726 | 2.211880e-51 | -8.615850e-47 |
| Msa1271280 | Msa1307190 | 0.801022 | 1.095569e-48 | -8.615850e-47 |
| Msa1277400 | Msa1307190 | 0.930818 | 9.405279e-94 | -8.615850e-47 |
| Msa1285900 | Msa1307190 | 0.808793 | 2.600612e-50 | -8.615850e-47 |
| Msa1293770 | Msa1307190 | 0.801479 | 8.833003e-49 | -8.615850e-47 |
| Msa1294290 | Msa1307190 | 0.812464 | 4.183506e-51 | -8.615850e-47 |
| Msa1296800 | Msa1307190 | 0.842794 | 2.080171e-58 | -8.615850e-47 |
| Msa1300800 | Msa1307190 | 0.808404 | 3.149783e-50 | -8.615850e-47 |
| Msa1305310 | Msa1307190 | 0.934499 | 3.676274e-96 | -8.615850e-47 |
| Msa1305510 | Msa1307190 | 0.822419 | 2.392433e-53 | -8.615850e-47 |
| Msa1305750 | Msa1307190 | 0.842044 | 3.288545e-58 | -8.615850e-47 |
| Msa1307150 | Msa1307190 | 0.841057 | 5.984043e-58 | -8.615850e-47 |
| Msa1307190 | Msa1336780 | 0.809111 | 2.223476e-50 | -8.615850e-47 |
| Msa1307190 | Msa1351760 | 0.810905 | 9.137203e-51 | -8.615850e-47 |
| Msa1307190 | Msa1355400 | 0.824059 | 9.909282e-54 | -8.615850e-47 |
| Msa1307190 | Msa1356990 | 0.820331 | 7.258626e-53 | -8.615850e-47 |
| Msa1307190 | Msa1363890 | 0.802224 | 6.209052e-49 | -8.615850e-47 |
| Msa1307190 | Msa1374550 | 0.806606 | 7.581368e-50 | -8.615850e-47 |
| Msa1307190 | Msa1379970 | 0.845021 | 5.264985e-59 | -8.615850e-47 |
| Msa1307190 | Msa1394890 | 0.800831 | 1.198557e-48 | -8.615850e-47 |
| Msa1307190 | Msa1406780 | 0.839721 | 1.337394e-57 | -8.615850e-47 |
| Msa1307190 | Msa1408870 | 0.842118 | 3.142353e-58 | -8.615850e-47 |
| Msa1307190 | Msa1414930 | 0.827618 | 1.416243e-54 | -8.615850e-47 |
| Msa1307190 | Msa1420060 | 0.877048 | 8.588819e-69 | -8.615850e-47 |
| Msa1307190 | Msa1421550 | 0.876265 | 1.601651e-68 | -8.615850e-47 |
| Msa1307190 | Msa1431850 | 0.837986 | 3.758963e-57 | -8.615850e-47 |
| Msa1307190 | Msa1437710 | 0.848585 | 5.581307e-60 | -8.615850e-47 |
| Msa1307190 | Msa1442290 | 0.826703 | 2.345765e-54 | -8.615850e-47 |
| Msa1307190 | Msa1449940 | 0.825504 | 4.521832e-54 | -8.615850e-47 |
| Msa1307190 | Msa1461060 | 0.814004 | 1.920660e-51 | -8.615850e-47 |
| Msa0370600 | Msa1307190 | 0.812591 | 3.924929e-51 | -8.615850e-47 |
| Msa0371540 | Msa1307190 | 0.861729 | 8.361941e-64 | -8.615850e-47 |
| Msa0378500 | Msa1307190 | 0.802348 | 5.855573e-49 | -8.615850e-47 |
| Msa0392420 | Msa1307190 | 0.805148 | 1.535086e-49 | -8.615850e-47 |
| Msa0392460 | Msa1307190 | 0.800791 | 1.220973e-48 | -8.615850e-47 |
| Msa0406000 | Msa1307190 | 0.822027 | 2.950185e-53 | -8.615850e-47 |
| Msa0408630 | Msa1307190 | 0.843031 | 1.798531e-58 | -8.615850e-47 |
| Msa0408640 | Msa1307190 | 0.829781 | 4.248889e-55 | -8.615850e-47 |
| Msa0418200 | Msa1307190 | 0.828387 | 9.246334e-55 | -8.615850e-47 |
| Msa0419970 | Msa1307190 | 0.826208 | 3.078109e-54 | -8.615850e-47 |
| Msa0436500 | Msa1307190 | 0.847739 | 9.557546e-60 | -8.615850e-47 |
| Msa0451400 | Msa1307190 | 0.841835 | 3.734506e-58 | -8.615850e-47 |
| Msa0453520 | Msa1307190 | 0.824341 | 8.506640e-54 | -8.615850e-47 |
| Msa0461720 | Msa1307190 | 0.823841 | 1.114869e-53 | -8.615850e-47 |
| Msa0464540 | Msa1307190 | 0.823178 | 1.592638e-53 | -8.615850e-47 |
| Msa0466060 | Msa1307190 | 0.830048 | 3.657021e-55 | -8.615850e-47 |
| Msa0999300 | Msa1307190 | 0.847167 | 1.372389e-59 | -8.615850e-47 |
| Msa1001890 | Msa1307190 | 0.822116 | 2.814114e-53 | -8.615850e-47 |
| Msa1006830 | Msa1307190 | 0.807370 | 5.225016e-50 | -8.615850e-47 |
| Msa1009000 | Msa1307190 | 0.816208 | 6.224479e-52 | -8.615850e-47 |
| Msa1014270 | Msa1307190 | 0.828403 | 9.164269e-55 | -8.615850e-47 |
| Msa1016600 | Msa1307190 | 0.804507 | 2.089981e-49 | -8.615850e-47 |
| Msa1037770 | Msa1307190 | 0.801634 | 8.206628e-49 | -8.615850e-47 |
| Msa1037890 | Msa1307190 | 0.801316 | 9.538663e-49 | -8.615850e-47 |
| Msa1037900 | Msa1307190 | 0.842207 | 2.977457e-58 | -8.615850e-47 |
| Msa1037910 | Msa1307190 | 0.841730 | 3.980799e-58 | -8.615850e-47 |
| Msa1041530 | Msa1307190 | 0.857928 | 1.168218e-62 | -8.615850e-47 |
| Msa1042670 | Msa1307190 | 0.819427 | 1.167837e-52 | -8.615850e-47 |
| Msa1049010 | Msa1307190 | 0.810499 | 1.118341e-50 | -8.615850e-47 |
| Msa1055260 | Msa1307190 | 0.838253 | 3.210128e-57 | -8.615850e-47 |
| Msa1055280 | Msa1307190 | 0.841643 | 4.194750e-58 | -8.615850e-47 |
| Msa1070420 | Msa1307190 | 0.834580 | 2.761255e-56 | -8.615850e-47 |
| Msa1077150 | Msa1307190 | 0.816846 | 4.480159e-52 | -8.615850e-47 |
| Msa1077180 | Msa1307190 | 0.833780 | 4.380342e-56 | -8.615850e-47 |
| Msa1081570 | Msa1307190 | 0.871703 | 5.583439e-67 | -8.615850e-47 |
| Msa1096210 | Msa1307190 | 0.803990 | 2.677590e-49 | -8.615850e-47 |
| Msa0238890 | Msa1307190 | 0.818249 | 2.163477e-52 | -8.615850e-47 |
| Msa0252770 | Msa1307190 | 0.840997 | 6.207360e-58 | -8.615850e-47 |
| Msa0257680 | Msa1307190 | 0.810569 | 1.080092e-50 | -8.615850e-47 |
| Msa0289890 | Msa1307190 | 0.813795 | 2.135902e-51 | -8.615850e-47 |
| Msa0298240 | Msa1307190 | 0.845515 | 3.870167e-59 | -8.615850e-47 |
| Msa0306120 | Msa1307190 | 0.826645 | 2.421871e-54 | -8.615850e-47 |
| Msa0308830 | Msa1307190 | 0.804759 | 1.851789e-49 | -8.615850e-47 |
| Msa0314630 | Msa1307190 | 0.811288 | 7.545732e-51 | -8.615850e-47 |
| Msa0322830 | Msa1307190 | 0.802043 | 6.763822e-49 | -8.615850e-47 |
| Msa0323610 | Msa1307190 | 0.828045 | 1.118348e-54 | -8.615850e-47 |
| Msa0329620 | Msa1307190 | 0.860394 | 2.129347e-63 | -8.615850e-47 |
| Msa0331540 | Msa1307190 | 0.807233 | 5.586578e-50 | -8.615850e-47 |
| Msa0335270 | Msa1307190 | 0.809739 | 1.630411e-50 | -8.615850e-47 |
| Msa0337850 | Msa1307190 | 0.816690 | 4.856070e-52 | -8.615850e-47 |
| Msa0359250 | Msa1307190 | 0.839478 | 1.546804e-57 | -8.615850e-47 |
| Msa0361250 | Msa1307190 | 0.801125 | 1.043438e-48 | -8.615850e-47 |
| Msa0361260 | Msa1307190 | 0.828413 | 9.115659e-55 | -8.615850e-47 |
| Msa1123880 | Msa1307190 | 0.847784 | 9.288742e-60 | -8.615850e-47 |
| Msa1127140 | Msa1307190 | 0.875369 | 3.252608e-68 | -8.615850e-47 |
| Msa1127950 | Msa1307190 | 0.806771 | 6.996857e-50 | -8.615850e-47 |
| Msa1129960 | Msa1307190 | 0.842351 | 2.727444e-58 | -8.615850e-47 |
| Msa1129970 | Msa1307190 | 0.828342 | 9.481937e-55 | -8.615850e-47 |
| Msa1130010 | Msa1307190 | 0.804016 | 2.645097e-49 | -8.615850e-47 |
| Msa1145020 | Msa1307190 | 0.815804 | 7.662037e-52 | -8.615850e-47 |
| Msa1166400 | Msa1307190 | 0.865418 | 5.990237e-65 | -8.615850e-47 |
| Msa1169990 | Msa1307190 | 0.819175 | 1.333008e-52 | -8.615850e-47 |
| Msa1176160 | Msa1307190 | 0.986033 | 1.868183e-165 | -8.615850e-47 |
| Msa1178160 | Msa1307190 | 0.813973 | 1.951931e-51 | -8.615850e-47 |
| Msa1200440 | Msa1307190 | 0.820032 | 8.498686e-53 | -8.615850e-47 |
| Msa1201110 | Msa1307190 | 0.806158 | 9.420626e-50 | -8.615850e-47 |
| Msa1201160 | Msa1307190 | 0.827210 | 1.774588e-54 | -8.615850e-47 |
| Msa1204880 | Msa1307190 | 0.820720 | 5.908571e-53 | -8.615850e-47 |
| Msa1204910 | Msa1307190 | 0.833387 | 5.490514e-56 | -8.615850e-47 |
| Msa0487570 | Msa1307190 | 0.805693 | 1.180153e-49 | -8.615850e-47 |
| Msa0487630 | Msa1307190 | 0.802823 | 4.672424e-49 | -8.615850e-47 |
| Msa0492190 | Msa1307190 | 0.813801 | 2.129104e-51 | -8.615850e-47 |
| Msa0503580 | Msa1307190 | 0.825470 | 4.605320e-54 | -8.615850e-47 |
| Msa0517330 | Msa1307190 | 0.814988 | 1.163506e-51 | -8.615850e-47 |
| Msa0517340 | Msa1307190 | 0.851992 | 6.183754e-61 | -8.615850e-47 |
| Msa0535040 | Msa1307190 | 0.802418 | 5.664461e-49 | -8.615850e-47 |
| Msa0537920 | Msa1307190 | 0.847804 | 9.171688e-60 | -8.615850e-47 |
| Msa0538060 | Msa1307190 | 0.801376 | 9.272587e-49 | -8.615850e-47 |
| Msa0538220 | Msa1307190 | 0.814173 | 1.762955e-51 | -8.615850e-47 |
| Msa0543850 | Msa1307190 | 0.806797 | 6.908235e-50 | -8.615850e-47 |
| Msa0585730 | Msa1307190 | 0.800471 | 1.419014e-48 | -8.615850e-47 |
| Msa0594090 | Msa1307190 | 0.824788 | 6.677586e-54 | -8.615850e-47 |
| Msa0601110 | Msa1307190 | 0.809203 | 2.124520e-50 | -8.615850e-47 |
| Msa0601120 | Msa1307190 | 0.802609 | 5.172221e-49 | -8.615850e-47 |
| Msa0844560 | Msa1307190 | 0.805491 | 1.301094e-49 | -8.615850e-47 |
| Msa0849280 | Msa1307190 | 0.805626 | 1.218770e-49 | -8.615850e-47 |
| Msa0851020 | Msa1307190 | 0.801208 | 1.003495e-48 | -8.615850e-47 |
| Msa0856520 | Msa1307190 | 0.836530 | 8.867645e-57 | -8.615850e-47 |
| Msa0860280 | Msa1307190 | 0.819486 | 1.132426e-52 | -8.615850e-47 |
| Msa0862100 | Msa1307190 | 0.806386 | 8.435014e-50 | -8.615850e-47 |
| Msa0867350 | Msa1307190 | 0.852328 | 4.960336e-61 | -8.615850e-47 |
| Msa0872310 | Msa1307190 | 0.832084 | 1.156824e-55 | -8.615850e-47 |
| Msa0873190 | Msa1307190 | 0.818352 | 2.050337e-52 | -8.615850e-47 |
| Msa0880140 | Msa1307190 | 0.806952 | 6.407383e-50 | -8.615850e-47 |
| Msa0885060 | Msa1307190 | 0.833092 | 6.503597e-56 | -8.615850e-47 |
| Msa0896210 | Msa1307190 | 0.804547 | 2.049883e-49 | -8.615850e-47 |
| Msa0898730 | Msa1307190 | 0.845791 | 3.257712e-59 | -8.615850e-47 |
| Msa0905550 | Msa1307190 | 0.820600 | 6.296276e-53 | -8.615850e-47 |
| Msa0929870 | Msa1307190 | 0.809858 | 1.537017e-50 | -8.615850e-47 |
| Msa0937240 | Msa1307190 | 0.807893 | 4.046552e-50 | -8.615850e-47 |
| Msa0937550 | Msa1307190 | 0.808271 | 3.361876e-50 | -8.615850e-47 |
| Msa0979510 | Msa1307190 | 0.812318 | 4.502299e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307190 | MtrunA17_Chr8g0346321 | 97.753 | 89 | 2 | 0 | 2 | 90 | 164 | 252 | 9.82e-57 | 175 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 60 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATGGTTGATGTTTAATT+TGG | 0.179702 | 8_4:-2563392 | Msa1307190:three_prime_UTR |
| AATCACATGGTTCAATTCTT+TGG | 0.203507 | 8_4:+2563493 | None:intergenic |
| AGAAAGTTGGCAACCGAATT+TGG | 0.231188 | 8_4:+2566370 | None:intergenic |
| ATTCGGTTGCCAACTTTCTA+AGG | 0.265173 | 8_4:-2566366 | Msa1307190:five_prime_UTR |
| CTTCCAAAGCAAAGTATTCT+TGG | 0.268337 | 8_4:+2565816 | None:intergenic |
| CTTCGCTCCATTTGCAACTT+AGG | 0.315676 | 8_4:-2566092 | Msa1307190:intron |
| GTATTCTTGGTGATTGTTCA+TGG | 0.327683 | 8_4:+2565829 | None:intergenic |
| CATGGTGTGATTTACCTTCA+TGG | 0.334098 | 8_4:+2566335 | None:intergenic |
| AACCTTCACCACACCAAATT+CGG | 0.343239 | 8_4:-2566383 | Msa1307190:five_prime_UTR |
| ATGGGAGTGTCACTGTTATC+TGG | 0.356185 | 8_4:-2563581 | Msa1307190:three_prime_UTR |
| GAAGATTATTCCCCTTGTTA+AGG | 0.356621 | 8_4:-2565391 | Msa1307190:CDS |
| GTTATCTGTGACTATATATA+TGG | 0.364917 | 8_4:-2563408 | Msa1307190:three_prime_UTR |
| GTTTGTTACAGATCTTCAAT+TGG | 0.412010 | 8_4:-2566177 | Msa1307190:intron |
| AATGATGATTAGAAACTTCA+AGG | 0.418804 | 8_4:-2565621 | Msa1307190:five_prime_UTR |
| TCACCAAGAATACTTTGCTT+TGG | 0.419615 | 8_4:-2565819 | Msa1307190:five_prime_UTR |
| ATTCTTACCATTGGTACTCT+TGG | 0.429438 | 8_4:-2565869 | Msa1307190:five_prime_UTR |
| GTTTAATTTCCTTAGAAAGT+TGG | 0.431940 | 8_4:+2566357 | None:intergenic |
| TGTGTTCATGTTGTTTCTGT+TGG | 0.432041 | 8_4:-2563460 | Msa1307190:three_prime_UTR |
| ACTTGACTCAACCAAGACTT+TGG | 0.432800 | 8_4:+2565458 | None:intergenic |
| TTTGTTACAGATCTTCAATT+GGG | 0.432814 | 8_4:-2566176 | Msa1307190:intron |
| ACTTTCTTGATGTCTTTCAT+TGG | 0.437252 | 8_4:+2565357 | None:intergenic |
| AAACCGTTGAGAGTGTTGTT+AGG | 0.437651 | 8_4:+2566136 | None:intergenic |
| ATGATTTCATGACAAATCAT+AGG | 0.438088 | 8_4:+2565581 | None:intergenic |
| TCAAATGTGTTGTTGATCAA+TGG | 0.438577 | 8_4:+2565716 | None:intergenic |
| TTTGGAACCTAAGTTGCAAA+TGG | 0.442908 | 8_4:+2566085 | None:intergenic |
| TTTCCAATCACCGAGCATAT+CGG | 0.445673 | 8_4:+2565898 | None:intergenic |
| TGACCGATATGCTCGGTGAT+TGG | 0.446300 | 8_4:-2565901 | Msa1307190:five_prime_UTR |
| TGATTCTTGACATCAAGATC+TGG | 0.455218 | 8_4:+2564993 | None:intergenic |
| ATTTGATGAGAACAACTTTG+AGG | 0.478699 | 8_4:-2565699 | Msa1307190:five_prime_UTR |
| TTATCAGTGTTGTTGATTGA+AGG | 0.480019 | 8_4:+2565950 | None:intergenic |
| ATTAATAACCACATGAATGA+AGG | 0.483710 | 8_4:-2564951 | Msa1307190:CDS |
| ACGTATGAGATTAAATACTT+AGG | 0.485233 | 8_4:-2563537 | Msa1307190:three_prime_UTR |
| TGATGAAGAAGATGCTAAAG+AGG | 0.486614 | 8_4:-2565025 | Msa1307190:CDS |
| TATGATTTGTCATGAAATCA+TGG | 0.489589 | 8_4:-2565579 | Msa1307190:five_prime_UTR |
| TGATGATGATGCTAGAAAAG+AGG | 0.505541 | 8_4:-2565648 | Msa1307190:five_prime_UTR |
| CTAAGGAAATTAAACCATGA+AGG | 0.509618 | 8_4:-2566349 | Msa1307190:intron |
| TTATTCTGCAGCCAAAGTCT+TGG | 0.511362 | 8_4:-2565469 | Msa1307190:CDS |
| TTTCTATGATGTTGAACAAG+AGG | 0.511917 | 8_4:-2565747 | Msa1307190:five_prime_UTR |
| AGCCATTGCCTTCATTCATG+TGG | 0.516778 | 8_4:+2564943 | None:intergenic |
| TACTAGCTAGTGTTAAGCCA+TGG | 0.527892 | 8_4:-2563600 | Msa1307190:three_prime_UTR |
| TCTTCAATTGGGTGCACAAG+AGG | 0.532391 | 8_4:-2566165 | Msa1307190:five_prime_UTR |
| AAAGACGGAATTCTTACCAT+TGG | 0.543523 | 8_4:-2565878 | Msa1307190:five_prime_UTR |
| AAACTTCAAGGAAATTGTTG+AGG | 0.544282 | 8_4:-2565609 | Msa1307190:five_prime_UTR |
| CATCCTAACAACACTCTCAA+CGG | 0.551417 | 8_4:-2566139 | Msa1307190:five_prime_UTR |
| AACCGAATTTGGTGTGGTGA+AGG | 0.554082 | 8_4:+2566381 | None:intergenic |
| CTTCAAGGAAATTGTTGAGG+TGG | 0.564269 | 8_4:-2565606 | Msa1307190:five_prime_UTR |
| ATCATAGCCAAGAGTACCAA+TGG | 0.569824 | 8_4:+2565862 | None:intergenic |
| CATCATCATCAACTACATCA+TGG | 0.574853 | 8_4:+2565660 | None:intergenic |
| ATGCTCGGTGATTGGAAAGA+CGG | 0.581029 | 8_4:-2565893 | Msa1307190:five_prime_UTR |
| TCTTGACATCAAGATCTGGA+TGG | 0.589109 | 8_4:+2564997 | None:intergenic |
| ACTAGCTAGTGTTAAGCCAT+GGG | 0.596171 | 8_4:-2563599 | Msa1307190:three_prime_UTR |
| TGAATGAAGGCAATGGCTCA+AGG | 0.597220 | 8_4:-2564938 | Msa1307190:CDS |
| TGATTGTTCATGGATTTCAA+AGG | 0.604206 | 8_4:+2565839 | None:intergenic |
| AACCACATGAATGAAGGCAA+TGG | 0.612697 | 8_4:-2564945 | Msa1307190:CDS |
| AGATAACAGTGACACTCCCA+TGG | 0.629854 | 8_4:+2563583 | None:intergenic |
| GTTGCTTTGACCGATATGCT+CGG | 0.632441 | 8_4:-2565908 | Msa1307190:five_prime_UTR |
| TCTTAACATCAGAATCAGCA+AGG | 0.653265 | 8_4:+2565502 | None:intergenic |
| GTTGGCAACCGAATTTGGTG+TGG | 0.690791 | 8_4:+2566375 | None:intergenic |
| ACACAAATTACAAAATCACA+TGG | 0.699258 | 8_4:+2563480 | None:intergenic |
| GATTTGTCATGAAATCATGG+AGG | 0.748556 | 8_4:-2565576 | Msa1307190:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAATAAATTTATTTTTGTT+TGG | + | chr8_4:2565743-2565762 | None:intergenic | 10.0% |
| !! | GAATTGAAAAAAATTAATTT+GGG | + | chr8_4:2565900-2565919 | None:intergenic | 10.0% |
| !! | TGAATTGAAAAAAATTAATT+TGG | + | chr8_4:2565901-2565920 | None:intergenic | 10.0% |
| !!! | AATTAATTTTTTTCAATTCA+TGG | - | chr8_4:2565901-2565920 | Msa1307190:five_prime_UTR | 10.0% |
| !!! | TATAAATTTTGTCAAAAAAA+TGG | + | chr8_4:2566035-2566054 | None:intergenic | 10.0% |
| !!! | ATCATATATTATGAAATTTT+TGG | - | chr8_4:2566109-2566128 | Msa1307190:five_prime_UTR | 10.0% |
| !!! | TCATATATTATGAAATTTTT+GGG | - | chr8_4:2566110-2566129 | Msa1307190:five_prime_UTR | 10.0% |
| !!! | ATCACAATTTTTAACAATAA+AGG | + | chr8_4:2563519-2563538 | None:intergenic | 15.0% |
| !!! | TTTATTTTAGACACAAAATT+TGG | + | chr8_4:2563702-2563721 | None:intergenic | 15.0% |
| !! | TCAAGCAAATAATTAATTAT+TGG | + | chr8_4:2564681-2564700 | None:intergenic | 15.0% |
| !! | ATTATTTGCTTGAAATTAAT+TGG | - | chr8_4:2564688-2564707 | Msa1307190:intron | 15.0% |
| !!! | CTAAATAATCATTTGATTTT+AGG | - | chr8_4:2565103-2565122 | Msa1307190:intron | 15.0% |
| !!! | TGTTTTTAAGATAAATAGAT+AGG | - | chr8_4:2565375-2565394 | Msa1307190:CDS | 15.0% |
| !! | TAATTACATATATAGCCTTT+AGG | + | chr8_4:2564461-2564480 | None:intergenic | 20.0% |
| !!! | ATTTATTTCCATTTTCACAA+TGG | - | chr8_4:2564565-2564584 | Msa1307190:intron | 20.0% |
| !! | ATATTATCATTTACTTGTGA+TGG | - | chr8_4:2564915-2564934 | Msa1307190:intron | 20.0% |
| !! | CTATTTATCTTAAAAACAGA+AGG | + | chr8_4:2565373-2565392 | None:intergenic | 20.0% |
| !! | AAGATAAATAGATAGGTATA+TGG | - | chr8_4:2565382-2565401 | Msa1307190:CDS | 20.0% |
| !!! | AGTGTTGATTTTTTTTACAA+AGG | + | chr8_4:2565443-2565462 | None:intergenic | 20.0% |
| !! | AATAATACTAAGTGAATGTT+TGG | + | chr8_4:2565821-2565840 | None:intergenic | 20.0% |
| !!! | AAAAAATTAATTTGGGAAAC+AGG | + | chr8_4:2565893-2565912 | None:intergenic | 20.0% |
| !!! | TATGAAATTTTTGGGTTTAT+TGG | - | chr8_4:2566118-2566137 | Msa1307190:five_prime_UTR | 20.0% |
| !!! | TATATGGTTGATGTTTAATT+TGG | - | chr8_4:2566374-2566393 | Msa1307190:five_prime_UTR | 20.0% |
| !! | GTTTAATTTCCTTAGAAAGT+TGG | + | chr8_4:2563412-2563431 | None:intergenic | 25.0% |
| ! | CATATGCATGAGAAATATAA+TGG | + | chr8_4:2563471-2563490 | None:intergenic | 25.0% |
| ! | TTTGTTACAGATCTTCAATT+GGG | - | chr8_4:2563590-2563609 | Msa1307190:three_prime_UTR | 25.0% |
| !!! | GTTTGTTGTTTTTACTTAGA+TGG | - | chr8_4:2563765-2563784 | Msa1307190:intron | 25.0% |
| ! | AATGATGATTAGAAACTTCA+AGG | - | chr8_4:2564145-2564164 | Msa1307190:intron | 25.0% |
| ! | ATGATTTCATGACAAATCAT+AGG | + | chr8_4:2564188-2564207 | None:intergenic | 25.0% |
| !! | TATGATTTGTCATGAAATCA+TGG | - | chr8_4:2564187-2564206 | Msa1307190:intron | 25.0% |
| !!! | CCATTTTTTGCTTTAAGTTT+TGG | + | chr8_4:2564340-2564359 | None:intergenic | 25.0% |
| ! | CCAAAACTTAAAGCAAAAAA+TGG | - | chr8_4:2564337-2564356 | Msa1307190:intron | 25.0% |
| ! | TTGCTTGAAATTAATTGGTT+AGG | - | chr8_4:2564693-2564712 | Msa1307190:intron | 25.0% |
| ! | ATTAATAACCACATGAATGA+AGG | - | chr8_4:2564815-2564834 | Msa1307190:intron | 25.0% |
| ! | AAAAAGACAGTTCATGAAAA+GGG | + | chr8_4:2564894-2564913 | None:intergenic | 25.0% |
| ! | AAAAAAGACAGTTCATGAAA+AGG | + | chr8_4:2564895-2564914 | None:intergenic | 25.0% |
| ! | ATGCATGTCTCAAATTAATT+TGG | - | chr8_4:2564974-2564993 | Msa1307190:CDS | 25.0% |
| ! | GTAAACTCTTAGATACTTTA+GGG | - | chr8_4:2565125-2565144 | Msa1307190:intron | 25.0% |
| !! | CTGTATCATTCCAATTTTAT+CGG | - | chr8_4:2565228-2565247 | Msa1307190:intron | 25.0% |
| ! | ATTAATTTATAGTCCTTTCG+AGG | + | chr8_4:2565258-2565277 | None:intergenic | 25.0% |
| ! | TTTATCTTAAAAACAGAAGG+AGG | + | chr8_4:2565370-2565389 | None:intergenic | 25.0% |
| !!! | AGTTTGAGTGTTTTTTTTAG+AGG | + | chr8_4:2565476-2565495 | None:intergenic | 25.0% |
| ! | TCTAAAAAAAACACTCAAAC+TGG | - | chr8_4:2565475-2565494 | Msa1307190:CDS | 25.0% |
| ! | CTAAAAAAAACACTCAAACT+GGG | - | chr8_4:2565476-2565495 | Msa1307190:CDS | 25.0% |
| !! | TTTATAGAGTTGAATGCTTT+TGG | + | chr8_4:2565618-2565637 | None:intergenic | 25.0% |
| ! | CAACTCTATAAAATCATGTT+TGG | - | chr8_4:2565626-2565645 | Msa1307190:five_prime_UTR | 25.0% |
| ! | TCAATATCACTTGAATAGAT+TGG | + | chr8_4:2565970-2565989 | None:intergenic | 25.0% |
| ! | ATCTATTCAAGTGATATTGA+TGG | - | chr8_4:2565970-2565989 | Msa1307190:five_prime_UTR | 25.0% |
| ! | ACGTATGAGATTAAATACTT+AGG | - | chr8_4:2566229-2566248 | Msa1307190:intron | 25.0% |
| ! | ACACAAATTACAAAATCACA+TGG | + | chr8_4:2566289-2566308 | None:intergenic | 25.0% |
| ! | GTTATCTGTGACTATATATA+TGG | - | chr8_4:2566358-2566377 | Msa1307190:five_prime_UTR | 25.0% |
| CTAAGGAAATTAAACCATGA+AGG | - | chr8_4:2563417-2563436 | Msa1307190:three_prime_UTR | 30.0% | |
| ! | GTTTGTTACAGATCTTCAAT+TGG | - | chr8_4:2563589-2563608 | Msa1307190:three_prime_UTR | 30.0% |
| ! | TTATCAGTGTTGTTGATTGA+AGG | + | chr8_4:2563819-2563838 | None:intergenic | 30.0% |
| TGATTGTTCATGGATTTCAA+AGG | + | chr8_4:2563930-2563949 | None:intergenic | 30.0% | |
| TTTCTATGATGTTGAACAAG+AGG | - | chr8_4:2564019-2564038 | Msa1307190:intron | 30.0% | |
| ! | TCAAATGTGTTGTTGATCAA+TGG | + | chr8_4:2564053-2564072 | None:intergenic | 30.0% |
| ATTTGATGAGAACAACTTTG+AGG | - | chr8_4:2564067-2564086 | Msa1307190:intron | 30.0% | |
| AAACTTCAAGGAAATTGTTG+AGG | - | chr8_4:2564157-2564176 | Msa1307190:intron | 30.0% | |
| GTTGAAGCTGATCAAAAAAA+AGG | - | chr8_4:2564221-2564240 | Msa1307190:intron | 30.0% | |
| ACTTTCTTGATGTCTTTCAT+TGG | + | chr8_4:2564412-2564431 | None:intergenic | 30.0% | |
| ! | TATCATTTACTTGTGATGGA+AGG | - | chr8_4:2564919-2564938 | Msa1307190:exon | 30.0% |
| ! | ATGATAACCTTTTCAACCTA+AGG | + | chr8_4:2565039-2565058 | None:intergenic | 30.0% |
| GGTAAACTCTTAGATACTTT+AGG | - | chr8_4:2565124-2565143 | Msa1307190:intron | 30.0% | |
| CGATAAAATTGGAATGATAC+AGG | + | chr8_4:2565230-2565249 | None:intergenic | 30.0% | |
| TACATACACAATTAAACTCG+AGG | - | chr8_4:2565317-2565336 | Msa1307190:intron | 30.0% | |
| ACAGAAGGAGGATAAAATTA+AGG | + | chr8_4:2565358-2565377 | None:intergenic | 30.0% | |
| ATAGATAGGTATATGGATGA+TGG | - | chr8_4:2565389-2565408 | Msa1307190:CDS | 30.0% | |
| CCAAGAAAAAAGAGTTTAAG+AGG | + | chr8_4:2565503-2565522 | None:intergenic | 30.0% | |
| !!! | CCTCTTAAACTCTTTTTTCT+TGG | - | chr8_4:2565500-2565519 | Msa1307190:exon | 30.0% |
| TAACATCCTATCAATTAAGC+AGG | - | chr8_4:2565527-2565546 | Msa1307190:five_prime_UTR | 30.0% | |
| ATGTATCCTGCTTAATTGAT+AGG | + | chr8_4:2565536-2565555 | None:intergenic | 30.0% | |
| ! | TAATATGCCTCTTTTTGTAG+TGG | - | chr8_4:2566004-2566023 | Msa1307190:intron | 30.0% |
| GTTTATTGGATTAACCTTTC+TGG | - | chr8_4:2566132-2566151 | Msa1307190:five_prime_UTR | 30.0% | |
| AATCACATGGTTCAATTCTT+TGG | + | chr8_4:2566276-2566295 | None:intergenic | 30.0% | |
| ! | TTTGGAACCTAAGTTGCAAA+TGG | + | chr8_4:2563684-2563703 | None:intergenic | 35.0% |
| AAAGACGGAATTCTTACCAT+TGG | - | chr8_4:2563888-2563907 | Msa1307190:intron | 35.0% | |
| ATTCTTACCATTGGTACTCT+TGG | - | chr8_4:2563897-2563916 | Msa1307190:intron | 35.0% | |
| ! | GTATTCTTGGTGATTGTTCA+TGG | + | chr8_4:2563940-2563959 | None:intergenic | 35.0% |
| TCACCAAGAATACTTTGCTT+TGG | - | chr8_4:2563947-2563966 | Msa1307190:intron | 35.0% | |
| ! | CTTCCAAAGCAAAGTATTCT+TGG | + | chr8_4:2563953-2563972 | None:intergenic | 35.0% |
| CATCATCATCAACTACATCA+TGG | + | chr8_4:2564109-2564128 | None:intergenic | 35.0% | |
| ! | TGATGATGATGCTAGAAAAG+AGG | - | chr8_4:2564118-2564137 | Msa1307190:intron | 35.0% |
| GATTTGTCATGAAATCATGG+AGG | - | chr8_4:2564190-2564209 | Msa1307190:intron | 35.0% | |
| TCTTAACATCAGAATCAGCA+AGG | + | chr8_4:2564267-2564286 | None:intergenic | 35.0% | |
| GAAGATTATTCCCCTTGTTA+AGG | - | chr8_4:2564375-2564394 | Msa1307190:intron | 35.0% | |
| ! | ACGTGCATTTTCCTTAACAA+GGG | + | chr8_4:2564389-2564408 | None:intergenic | 35.0% |
| CATTGACACCATTGTGAAAA+TGG | + | chr8_4:2564576-2564595 | None:intergenic | 35.0% | |
| TTGTAGATAGGATAGTGTTG+AGG | - | chr8_4:2564655-2564674 | Msa1307190:intron | 35.0% | |
| TGATGAAGAAGATGCTAAAG+AGG | - | chr8_4:2564741-2564760 | Msa1307190:intron | 35.0% | |
| TGATTCTTGACATCAAGATC+TGG | + | chr8_4:2564776-2564795 | None:intergenic | 35.0% | |
| ! | AGGTCTTTTATCGCAGTTTA+AGG | - | chr8_4:2564848-2564867 | Msa1307190:intron | 35.0% |
| ACATGACAAACACATACCTT+AGG | - | chr8_4:2565020-2565039 | Msa1307190:CDS | 35.0% | |
| !! | ACACATACCTTAGGTTGAAA+AGG | - | chr8_4:2565029-2565048 | Msa1307190:CDS | 35.0% |
| !! | ACTTTAGGGTTTAGTCGTAT+CGG | - | chr8_4:2565139-2565158 | Msa1307190:intron | 35.0% |
| TTTCAGTGAAGATAGATGCA+GGG | - | chr8_4:2565859-2565878 | Msa1307190:five_prime_UTR | 35.0% | |
| ! | ACCTCTTTGTTTGGATGTTT+GGG | + | chr8_4:2565929-2565948 | None:intergenic | 35.0% |
| ! | AACCTCTTTGTTTGGATGTT+TGG | + | chr8_4:2565930-2565949 | None:intergenic | 35.0% |
| GCTATATGAACCTCTTTGTT+TGG | + | chr8_4:2565938-2565957 | None:intergenic | 35.0% | |
| GGTTTAACCACTACAAAAAG+AGG | + | chr8_4:2566014-2566033 | None:intergenic | 35.0% | |
| !! | TGTGTTCATGTTGTTTCTGT+TGG | - | chr8_4:2566306-2566325 | Msa1307190:intron | 35.0% |
| AACCTTCACCACACCAAATT+CGG | - | chr8_4:2563383-2563402 | Msa1307190:three_prime_UTR | 40.0% | |
| AGAAAGTTGGCAACCGAATT+TGG | + | chr8_4:2563399-2563418 | None:intergenic | 40.0% | |
| ATTCGGTTGCCAACTTTCTA+AGG | - | chr8_4:2563400-2563419 | Msa1307190:three_prime_UTR | 40.0% | |
| CATGGTGTGATTTACCTTCA+TGG | + | chr8_4:2563434-2563453 | None:intergenic | 40.0% | |
| CATCCTAACAACACTCTCAA+CGG | - | chr8_4:2563627-2563646 | Msa1307190:intron | 40.0% | |
| !! | AAACCGTTGAGAGTGTTGTT+AGG | + | chr8_4:2563633-2563652 | None:intergenic | 40.0% |
| TTTCCAATCACCGAGCATAT+CGG | + | chr8_4:2563871-2563890 | None:intergenic | 40.0% | |
| !! | ATCATAGCCAAGAGTACCAA+TGG | + | chr8_4:2563907-2563926 | None:intergenic | 40.0% |
| CTTCAAGGAAATTGTTGAGG+TGG | - | chr8_4:2564160-2564179 | Msa1307190:intron | 40.0% | |
| TTATTCTGCAGCCAAAGTCT+TGG | - | chr8_4:2564297-2564316 | Msa1307190:intron | 40.0% | |
| ACTTGACTCAACCAAGACTT+TGG | + | chr8_4:2564311-2564330 | None:intergenic | 40.0% | |
| ! | CGTGCATTTTCCTTAACAAG+GGG | + | chr8_4:2564388-2564407 | None:intergenic | 40.0% |
| ! | GACGTGCATTTTCCTTAACA+AGG | + | chr8_4:2564390-2564409 | None:intergenic | 40.0% |
| CTACATCATGCACTTCCTAA+AGG | - | chr8_4:2564443-2564462 | Msa1307190:intron | 40.0% | |
| ATCTACAAAAGAGTCCTCAC+TGG | + | chr8_4:2564643-2564662 | None:intergenic | 40.0% | |
| ! | GTGAGGACTCTTTTGTAGAT+AGG | - | chr8_4:2564643-2564662 | Msa1307190:intron | 40.0% |
| TCTTGACATCAAGATCTGGA+TGG | + | chr8_4:2564772-2564791 | None:intergenic | 40.0% | |
| AACCACATGAATGAAGGCAA+TGG | - | chr8_4:2564821-2564840 | Msa1307190:intron | 40.0% | |
| ! | TACTTGTGATGGAAGGTTTG+TGG | - | chr8_4:2564926-2564945 | Msa1307190:CDS | 40.0% |
| TCGAGGACATCCGATAAAAT+TGG | + | chr8_4:2565241-2565260 | None:intergenic | 40.0% | |
| ! | TTTTATCGGATGTCCTCGAA+AGG | - | chr8_4:2565242-2565261 | Msa1307190:intron | 40.0% |
| CTTTCAGTGAAGATAGATGC+AGG | - | chr8_4:2565858-2565877 | Msa1307190:five_prime_UTR | 40.0% | |
| ACCCAAACATCCAAACAAAG+AGG | - | chr8_4:2565925-2565944 | Msa1307190:five_prime_UTR | 40.0% | |
| !! | TAACCTTTCTGGTTTGTTGC+AGG | - | chr8_4:2566143-2566162 | Msa1307190:five_prime_UTR | 40.0% |
| TACTAGCTAGTGTTAAGCCA+TGG | - | chr8_4:2566166-2566185 | Msa1307190:five_prime_UTR | 40.0% | |
| ACTAGCTAGTGTTAAGCCAT+GGG | - | chr8_4:2566167-2566186 | Msa1307190:five_prime_UTR | 40.0% | |
| !! | AACCGAATTTGGTGTGGTGA+AGG | + | chr8_4:2563388-2563407 | None:intergenic | 45.0% |
| TCTTCAATTGGGTGCACAAG+AGG | - | chr8_4:2563601-2563620 | Msa1307190:three_prime_UTR | 45.0% | |
| CTTCGCTCCATTTGCAACTT+AGG | - | chr8_4:2563674-2563693 | Msa1307190:intron | 45.0% | |
| ! | GTTGCTTTGACCGATATGCT+CGG | - | chr8_4:2563858-2563877 | Msa1307190:intron | 45.0% |
| ! | ATGCTCGGTGATTGGAAAGA+CGG | - | chr8_4:2563873-2563892 | Msa1307190:intron | 45.0% |
| GCTTCATAGTTTGACCAGTG+AGG | - | chr8_4:2564626-2564645 | Msa1307190:intron | 45.0% | |
| AGCCATTGCCTTCATTCATG+TGG | + | chr8_4:2564826-2564845 | None:intergenic | 45.0% | |
| TGAATGAAGGCAATGGCTCA+AGG | - | chr8_4:2564828-2564847 | Msa1307190:intron | 45.0% | |
| GTACCTGCAACAAACCAGAA+AGG | + | chr8_4:2566149-2566168 | None:intergenic | 45.0% | |
| AGATAACAGTGACACTCCCA+TGG | + | chr8_4:2566186-2566205 | None:intergenic | 45.0% | |
| !! | ATGGGAGTGTCACTGTTATC+TGG | - | chr8_4:2566185-2566204 | Msa1307190:intron | 45.0% |
| ! | GTTGGCAACCGAATTTGGTG+TGG | + | chr8_4:2563394-2563413 | None:intergenic | 50.0% |
| ATGGCTGTGTTGTGTGTGCA+TGG | + | chr8_4:2563452-2563471 | None:intergenic | 50.0% | |
| ! | TGACCGATATGCTCGGTGAT+TGG | - | chr8_4:2563865-2563884 | Msa1307190:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 2563367 | 2566421 | 2563367 | ID=Msa1307190;Name=Msa1307190 |
| chr8_4 | mRNA | 2563367 | 2566421 | 2563367 | ID=Msa1307190-mRNA-1;Parent=Msa1307190;Name=Msa1307190-mRNA-1;_AED=0.11;_eAED=0.11;_QI=670|1|1|1|0.5|0.2|5|258|90 |
| chr8_4 | exon | 2563367 | 2563623 | 2563367 | ID=Msa1307190-mRNA-1:exon:801;Parent=Msa1307190-mRNA-1 |
| chr8_4 | exon | 2564919 | 2565048 | 2564919 | ID=Msa1307190-mRNA-1:exon:800;Parent=Msa1307190-mRNA-1 |
| chr8_4 | exon | 2565359 | 2566004 | 2565359 | ID=Msa1307190-mRNA-1:exon:799;Parent=Msa1307190-mRNA-1 |
| chr8_4 | exon | 2566093 | 2566188 | 2566093 | ID=Msa1307190-mRNA-1:exon:798;Parent=Msa1307190-mRNA-1 |
| chr8_4 | exon | 2566350 | 2566421 | 2566350 | ID=Msa1307190-mRNA-1:exon:797;Parent=Msa1307190-mRNA-1 |
| chr8_4 | five_prime_UTR | 2566350 | 2566421 | 2566350 | ID=Msa1307190-mRNA-1:five_prime_utr;Parent=Msa1307190-mRNA-1 |
| chr8_4 | five_prime_UTR | 2566093 | 2566188 | 2566093 | ID=Msa1307190-mRNA-1:five_prime_utr;Parent=Msa1307190-mRNA-1 |
| chr8_4 | five_prime_UTR | 2565503 | 2566004 | 2565503 | ID=Msa1307190-mRNA-1:five_prime_utr;Parent=Msa1307190-mRNA-1 |
| chr8_4 | CDS | 2565359 | 2565502 | 2565359 | ID=Msa1307190-mRNA-1:cds;Parent=Msa1307190-mRNA-1 |
| chr8_4 | CDS | 2564920 | 2565048 | 2564920 | ID=Msa1307190-mRNA-1:cds;Parent=Msa1307190-mRNA-1 |
| chr8_4 | three_prime_UTR | 2564919 | 2564919 | 2564919 | ID=Msa1307190-mRNA-1:three_prime_utr;Parent=Msa1307190-mRNA-1 |
| chr8_4 | three_prime_UTR | 2563367 | 2563623 | 2563367 | ID=Msa1307190-mRNA-1:three_prime_utr;Parent=Msa1307190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
