AlfalfaGEDB | Msa0375680

M. sativa cultivar zhongmu-4 / Msa0375680

KEGG: K03921
GO: GO:0005575 GO:0016020
PFAM: PF03405.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0375680	PNY17631.1	85.676	370	51	1	1	368	1	370	0.0	670

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0375680	sp\|Q84VY3\|STAD6_ARATH	66.856	353	112	2	21	368	38	390	1.50e-176	499

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0375680	A0A2K3PQT1	85.676	370	51	1	1	368	1	370	0.0	670

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0019600	Msa0375680	0.834903	2.289879e-56	-8.615850e-47
Msa0185490	Msa0375680	0.816223	6.177543e-52	-8.615850e-47
Msa0197100	Msa0375680	0.805907	1.064159e-49	-8.615850e-47
Msa0212080	Msa0375680	0.810772	9.761254e-51	-8.615850e-47
Msa0212150	Msa0375680	0.843216	1.606352e-58	-8.615850e-47
Msa0375680	Msa0375700	0.805199	1.498117e-49	-8.615850e-47
Msa0375680	Msa0392420	0.805267	1.449477e-49	-8.615850e-47
Msa0375680	Msa0406000	0.845042	5.197334e-59	-8.615850e-47
Msa0375680	Msa0424330	0.807057	6.087612e-50	-8.615850e-47
Msa0375680	Msa0424340	0.809227	2.099651e-50	-8.615850e-47
Msa0375680	Msa0424350	0.820445	6.832580e-53	-8.615850e-47
Msa0375680	Msa0451400	0.865714	4.831261e-65	-8.615850e-47
Msa0375680	Msa0471240	0.917424	5.401905e-86	-8.615850e-47
Msa0375680	Msa0487570	0.809035	2.308265e-50	-8.615850e-47
Msa0375680	Msa0492190	0.827333	1.657845e-54	-8.615850e-47
Msa0375680	Msa0515950	0.811908	5.531986e-51	-8.615850e-47
Msa0375680	Msa0534930	0.822990	1.762454e-53	-8.615850e-47
Msa0375680	Msa0535040	0.800542	1.372700e-48	-8.615850e-47
Msa0375680	Msa0537920	0.830714	2.514239e-55	-8.615850e-47
Msa0375680	Msa0538220	0.805822	1.108816e-49	-8.615850e-47
Msa0375680	Msa0591790	0.829808	4.183417e-55	-8.615850e-47
Msa0375680	Msa0594090	0.864639	1.051913e-64	-8.615850e-47
Msa0375680	Msa0641250	0.833623	4.794778e-56	-8.615850e-47
Msa0375680	Msa0669840	0.868169	7.972510e-66	-8.615850e-47
Msa0375680	Msa0688500	0.804546	2.051329e-49	-8.615850e-47
Msa0375680	Msa0739580	0.829524	4.906225e-55	-8.615850e-47
Msa0375680	Msa0770290	0.823007	1.746092e-53	-8.615850e-47
Msa0375680	Msa0782360	0.841334	5.062171e-58	-8.615850e-47
Msa0375680	Msa0819890	0.820820	5.604824e-53	-8.615850e-47
Msa0375680	Msa0849280	0.830644	2.615552e-55	-8.615850e-47
Msa0375680	Msa0851020	0.833970	3.927952e-56	-8.615850e-47
Msa0375680	Msa0860280	0.859290	4.583145e-63	-8.615850e-47
Msa0375680	Msa0867350	0.843674	1.211522e-58	-8.615850e-47
Msa0375680	Msa0898730	0.841320	5.104894e-58	-8.615850e-47
Msa0375680	Msa0929870	0.819388	1.192232e-52	-8.615850e-47
Msa0375680	Msa0944760	0.812091	5.048317e-51	-8.615850e-47
Msa0375680	Msa0999300	0.838220	3.273377e-57	-8.615850e-47
Msa0375680	Msa1001890	0.800107	1.682698e-48	-8.615850e-47
Msa0375680	Msa1037770	0.812143	4.917145e-51	-8.615850e-47
Msa0375680	Msa1037890	0.838972	2.092561e-57	-8.615850e-47
Msa0375680	Msa1037900	0.814810	1.274697e-51	-8.615850e-47
Msa0375680	Msa1037910	0.813020	3.162252e-51	-8.615850e-47
Msa0375680	Msa1041530	0.801221	9.974438e-49	-8.615850e-47
Msa0375680	Msa1081570	0.816091	6.613254e-52	-8.615850e-47
Msa0375680	Msa1127140	0.832562	8.808323e-56	-8.615850e-47
Msa0375680	Msa1129950	0.801835	7.464208e-49	-8.615850e-47
Msa0375680	Msa1129960	0.816442	5.517254e-52	-8.615850e-47
Msa0375680	Msa1129970	0.815527	8.834660e-52	-8.615850e-47
Msa0375680	Msa1130010	0.827886	1.221406e-54	-8.615850e-47
Msa0375680	Msa1145020	0.809898	1.507192e-50	-8.615850e-47
Msa0375680	Msa1166400	0.824929	6.182875e-54	-8.615850e-47
Msa0375680	Msa1201110	0.813301	2.743746e-51	-8.615850e-47
Msa0375680	Msa1201160	0.815986	6.978309e-52	-8.615850e-47
Msa0375680	Msa1305510	0.833637	4.756024e-56	-8.615850e-47
Msa0375680	Msa1379970	0.817675	2.916531e-52	-8.615850e-47
Msa0375680	Msa1394890	0.820390	7.034444e-53	-8.615850e-47
Msa0375680	Msa1406780	0.837625	4.655161e-57	-8.615850e-47
Msa0375680	Msa1420060	0.806476	8.077136e-50	-8.615850e-47
Msa0375680	Msa1421550	0.837895	3.967139e-57	-8.615850e-47
Msa0375680	Msa1423460	0.818408	1.990897e-52	-8.615850e-47
Msa0375680	Msa1431850	0.840917	6.514246e-58	-8.615850e-47
Msa0375680	Msa1455320	0.850154	2.039664e-60	-8.615850e-47
Msa0375680	Msa1459530	0.804703	1.901947e-49	-8.615850e-47
Msa0375680	Msa1461060	0.843648	1.231015e-58	-8.615850e-47
Msa0239030	Msa0375680	0.817657	2.942700e-52	-8.615850e-47
Msa0252630	Msa0375680	0.822521	2.266162e-53	-8.615850e-47
Msa0252770	Msa0375680	0.819579	1.078401e-52	-8.615850e-47
Msa0276740	Msa0375680	0.801028	1.092341e-48	-8.615850e-47
Msa0289920	Msa0375680	0.837454	5.149707e-57	-8.615850e-47
Msa0291330	Msa0375680	0.800143	1.654526e-48	-8.615850e-47
Msa0298240	Msa0375680	0.815319	9.827813e-52	-8.615850e-47
Msa0306120	Msa0375680	0.836132	1.119370e-56	-8.615850e-47
Msa0316680	Msa0375680	0.801498	8.754064e-49	-8.615850e-47
Msa0329620	Msa0375680	0.823504	1.336478e-53	-8.615850e-47
Msa0359250	Msa0375680	0.859577	3.757669e-63	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0375680	MtrunA17_Chr3g0125981	83.514	370	60	1	1	369	1	370	0.0	654
Msa0375680	MtrunA17_Chr3g0126011	73.297	367	94	1	2	368	3	365	0.0	575
Msa0375680	MtrunA17_Chr3g0125991	73.025	367	95	1	2	368	3	365	0.0	567
Msa0375680	MtrunA17_Chr3g0125781	70.380	368	109	0	1	368	1	368	0.0	551
Msa0375680	MtrunA17_Chr1g0159321	71.468	361	93	2	17	367	28	388	0.0	536
Msa0375680	MtrunA17_Chr4g0045661	64.095	337	118	2	32	367	57	391	6.20e-160	454
Msa0375680	MtrunA17_Chr5g0406961	64.095	337	118	2	32	367	108	442	8.33e-160	455

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0375680	AT1G43800.1	66.856	353	112	2	21	368	38	390	1.52e-177	499
Msa0375680	AT3G02630.1	61.834	338	125	2	32	367	59	394	5.64e-154	439
Msa0375680	AT3G02610.2	61.383	347	127	4	27	367	66	411	3.67e-153	437
Msa0375680	AT3G02610.1	61.383	347	127	4	27	367	64	409	4.66e-153	437
Msa0375680	AT2G43710.2	62.018	337	125	2	32	367	65	399	5.52e-153	437
Msa0375680	AT2G43710.1	62.018	337	125	2	32	367	65	399	6.79e-153	437
Msa0375680	AT5G16230.1	57.923	366	148	5	6	367	36	399	7.19e-151	431
Msa0375680	AT3G02620.1	56.579	380	151	6	1	367	23	401	8.31e-151	431
Msa0375680	AT3G02620.2	56.579	380	151	6	1	367	26	404	8.44e-151	431
Msa0375680	AT5G16240.1	57.534	365	140	4	6	367	40	392	8.29e-150	429
Msa0375680	AT5G16230.2	61.111	324	121	4	48	367	1	323	1.83e-144	412
Msa0375680	AT3G02620.3	61.043	326	120	4	48	367	1	325	7.78e-144	411

Find 111 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCTATATATAAGTAAAATT+TGG	0.134908	3_1:-75470303	Msa0375680:three_prime_UTR
TCGATCAAGTGAAGGCATTA+AGG	0.300188	3_1:-75472029	Msa0375680:CDS
CTCTTGCAGCCTCCTAATCT+TGG	0.308277	3_1:+75470472	None:intergenic
AAAACATATCTCTATCTTTC+GGG	0.321851	3_1:-75471808	Msa0375680:CDS
ATGGCAATGTGCACTCAATT+AGG	0.331509	3_1:-75472273	Msa0375680:CDS
GAGACATTGAGTATGTCTTT+TGG	0.340015	3_1:+75472187	None:intergenic
GGGTCGGGTTGATATGTTCA+TGG	0.349549	3_1:-75471788	Msa0375680:CDS
TTTAATATATAAACTAAAAC+TGG	0.353168	3_1:+75470193	None:intergenic
CAAAACATATCTCTATCTTT+CGG	0.357765	3_1:-75471809	Msa0375680:CDS
CTTGATTGGACGTTGGAGAT+TGG	0.360703	3_1:-75470558	Msa0375680:CDS
TCTATATATAAGTAAAATTT+GGG	0.365282	3_1:-75470302	Msa0375680:three_prime_UTR
GATAGCTTGGAGTTCTTGAT+TGG	0.365666	3_1:-75470572	Msa0375680:CDS
CCAACATTCCTCCACTGGTT+TGG	0.368196	3_1:+75472101	None:intergenic
TTGCTTATGGTGTAGGATAT+AGG	0.368907	3_1:-75470950	Msa0375680:intron
ACCATCATGCATCAAGTGTC+CGG	0.383908	3_1:+75470670	None:intergenic
AGTGTCCGGGCATTGTTATA+TGG	0.388397	3_1:+75470684	None:intergenic
GGGCTGTATGGACACGCTCT+TGG	0.392310	3_1:-75471864	Msa0375680:CDS
CGATCAAGTGAAGGCATTAA+GGG	0.400225	3_1:-75472028	Msa0375680:CDS
TTTCAAGTCATTAGAGAGTT+GGG	0.400750	3_1:-75472148	Msa0375680:CDS
ACAGAAAAGTGGCTCGCTCT+TGG	0.405583	3_1:+75470885	None:intergenic
AGATGAAACCTAAGTTTAGT+TGG	0.414064	3_1:-75470427	Msa0375680:CDS
TTTGGGACGGGGCCTTTAGA+TGG	0.414164	3_1:+75472223	None:intergenic
CATTGCCAACGTACCAATCA+TGG	0.428195	3_1:-75471939	Msa0375680:CDS
ATCGCTGTCATCGTCTCTGT+GGG	0.438188	3_1:+75470725	None:intergenic
GTGGGCTTGCACCCAAGATT+AGG	0.440604	3_1:-75470484	Msa0375680:CDS
GCACCAATCCATGGGCTGTA+TGG	0.441370	3_1:-75471876	Msa0375680:CDS
CTTGGACGGCTGAGGAGAAT+AGG	0.445934	3_1:-75471846	Msa0375680:CDS
TCGAAGACCCAACTAAACTT+AGG	0.447054	3_1:+75470419	None:intergenic
AAAACTACAAAATAATCGTT+TGG	0.448525	3_1:+75471988	None:intergenic
GCATAAGCAAAAGCCTTGTA+TGG	0.450041	3_1:+75470914	None:intergenic
GATGAAACCTAAGTTTAGTT+GGG	0.451996	3_1:-75470426	Msa0375680:CDS
ATATCTCTATCTTTCGGGTC+GGG	0.456137	3_1:-75471803	Msa0375680:CDS
TCCTCCACTGGTTTGGCTAG+TGG	0.461572	3_1:+75472108	None:intergenic
CCAGTCTGTTAAACCATGAT+TGG	0.462427	3_1:+75471926	None:intergenic
GGCTGCCAACATTCCTCCAC+TGG	0.466668	3_1:+75472096	None:intergenic
CTGCAGAGAAATGACTGAAT+AGG	0.475282	3_1:+75470636	None:intergenic
ATATTATAAGATACTCCCTT+CGG	0.475553	3_1:+75470170	None:intergenic
TCTTGCAGCCTCCTAATCTT+GGG	0.478217	3_1:+75470473	None:intergenic
TCTGCAGTGGCACAACGTAT+TGG	0.480986	3_1:-75470620	Msa0375680:CDS
GTACGTTGGCAATGCTTCCT+CGG	0.500450	3_1:+75471948	None:intergenic
ATGGTGTAGGATATAGGAAC+AGG	0.502877	3_1:-75470944	Msa0375680:intron
TGCCAGCTCTAATCAAGTAT+TGG	0.509971	3_1:+75471752	None:intergenic
CCAATCATGGTTTAACAGAC+TGG	0.510965	3_1:-75471926	Msa0375680:CDS
CATATCTCTATCTTTCGGGT+CGG	0.512882	3_1:-75471804	Msa0375680:CDS
ATGGTTTAACAGACTGGATG+GGG	0.515527	3_1:-75471920	Msa0375680:CDS
ATCCAATACTTGATTAGAGC+TGG	0.517971	3_1:-75471754	Msa0375680:CDS
CTGGTTCAAGCACCAATCCA+TGG	0.522757	3_1:-75471885	Msa0375680:CDS
TCATGGTTTAACAGACTGGA+TGG	0.523384	3_1:-75471922	Msa0375680:CDS
CCAAACCAGTGGAGGAATGT+TGG	0.526760	3_1:-75472101	Msa0375680:CDS
AATATATCAAGCAATGATGA+TGG	0.536988	3_1:-75472292	Msa0375680:exon
TGATAAGCAAACACTAGGGT+AGG	0.538954	3_1:+75470144	None:intergenic
GATGGGGTTGGAGACGAGAC+TGG	0.544491	3_1:-75471904	Msa0375680:CDS
CCATCATGCATCAAGTGTCC+GGG	0.545387	3_1:+75470671	None:intergenic
TCCGACGGTAGTGAAGAGTC+TGG	0.546524	3_1:+75472060	None:intergenic
TTTAACAGACTGGATGGGGT+TGG	0.546711	3_1:-75471916	Msa0375680:CDS
CATGGTTTAACAGACTGGAT+GGG	0.552177	3_1:-75471921	Msa0375680:CDS
TAGTTTATATATTAAACCGA+AGG	0.553768	3_1:-75470186	Msa0375680:three_prime_UTR
CAGCATGGCTCGACTAGCTA+AGG	0.555157	3_1:-75470855	Msa0375680:CDS
TGTATGGACACGCTCTTGGA+CGG	0.555722	3_1:-75471860	Msa0375680:CDS
TTACTTATATATAGAACTAG+AGG	0.556459	3_1:+75470310	None:intergenic
TCTACCACAATGCCATCTAA+AGG	0.559658	3_1:-75472235	Msa0375680:CDS
CTCAATTAGGACCACGTGCG+TGG	0.562488	3_1:-75472260	Msa0375680:CDS
AAAAGTGGCTCGCTCTTGGA+AGG	0.564619	3_1:+75470889	None:intergenic
AGTAACCATATAACAATGCC+CGG	0.565594	3_1:-75470689	Msa0375680:CDS
GAGCGTGTCCATACAGCCCA+TGG	0.565706	3_1:+75471868	None:intergenic
CATTGCAAAATTTCTAGAGG+TGG	0.566000	3_1:-75470750	Msa0375680:CDS
ATACTTGATTAGAGCTGGCA+TGG	0.568541	3_1:-75471749	Msa0375680:intron
GTACATGATAAGCAAACACT+AGG	0.569112	3_1:+75470139	None:intergenic
TAGTGACTACATCGATAGCT+TGG	0.572127	3_1:-75470585	Msa0375680:CDS
TATCGCTGTCATCGTCTCTG+TGG	0.572162	3_1:+75470724	None:intergenic
CCAACGCTTGCATGTATATG+TGG	0.573043	3_1:-75470821	Msa0375680:CDS
AGTTTATATATTAAACCGAA+GGG	0.575443	3_1:-75470185	Msa0375680:three_prime_UTR
TGTCCATACAGCCCATGGAT+TGG	0.576962	3_1:+75471873	None:intergenic
CCACATATACATGCAAGCGT+TGG	0.581994	3_1:+75470821	None:intergenic
TTAAACCATGATTGGTACGT+TGG	0.582627	3_1:+75471934	None:intergenic
TGGTTCAAGCACCAATCCAT+GGG	0.582779	3_1:-75471884	Msa0375680:CDS
GACACGCTCTTGGACGGCTG+AGG	0.585462	3_1:-75471854	Msa0375680:CDS
ATTCAGTCATTTCTCTGCAG+TGG	0.588279	3_1:-75470633	Msa0375680:CDS
GGCTTGCACCCAAGATTAGG+AGG	0.589066	3_1:-75470481	Msa0375680:CDS
AACAGGAAGTAATCCATACA+AGG	0.590466	3_1:-75470927	Msa0375680:CDS
GCCAGACTCTTCACTACCGT+CGG	0.590866	3_1:-75472061	Msa0375680:CDS
TGGAGTTCTTGATTGGACGT+TGG	0.591629	3_1:-75470565	Msa0375680:CDS
CCCGGACACTTGATGCATGA+TGG	0.596093	3_1:-75470671	Msa0375680:CDS
GCCACTAGCCAAACCAGTGG+AGG	0.597505	3_1:-75472109	Msa0375680:CDS
TACTTATATATAGAACTAGA+GGG	0.597791	3_1:+75470311	None:intergenic
ACAACGTATTGGTGTGTACA+CGG	0.599250	3_1:-75470609	Msa0375680:CDS
GCTGCCGTCTGACAGAAAAG+TGG	0.600013	3_1:+75470874	None:intergenic
GCTAGAGGGTTTGACAAGCG+AGG	0.609085	3_1:-75470531	Msa0375680:CDS
TGGAGATTGGAGAAGCTAGA+GGG	0.609211	3_1:-75470545	Msa0375680:CDS
GAAGGCATTAAGGGATCGAA+CGG	0.611309	3_1:-75472019	Msa0375680:CDS
AGAAATGACTGAATAGGTGT+GGG	0.611780	3_1:+75470642	None:intergenic
GATCATTGCAAAATTTCTAG+AGG	0.612065	3_1:-75470753	Msa0375680:CDS
TTGGAGATTGGAGAAGCTAG+AGG	0.613405	3_1:-75470546	Msa0375680:CDS
CGTGCACAAGAGATCGTGTG+TGG	0.620067	3_1:-75470503	Msa0375680:CDS
ACGGCTGAGGAGAATAGGCA+TGG	0.622537	3_1:-75471841	Msa0375680:CDS
GATAAGCAAACACTAGGGTA+GGG	0.622620	3_1:+75470145	None:intergenic
CTAGAGGGTTTGACAAGCGA+GGG	0.626748	3_1:-75470530	Msa0375680:CDS
TGAGTTCATCGATCAAGTGA+AGG	0.637744	3_1:-75472037	Msa0375680:CDS
GCCACGAGATTGCATATGAG+AGG	0.641136	3_1:-75470775	Msa0375680:CDS
GAGAAATGACTGAATAGGTG+TGG	0.645655	3_1:+75470641	None:intergenic
TCCTCTCATATGCAATCTCG+TGG	0.655385	3_1:+75470774	None:intergenic
TACATGATAAGCAAACACTA+GGG	0.657994	3_1:+75470140	None:intergenic
GGGGCCTTTAGATGGCATTG+TGG	0.664695	3_1:+75472231	None:intergenic
GTGCACAAGAGATCGTGTGT+GGG	0.665993	3_1:-75470502	Msa0375680:CDS
GCTCGACTAGCTAAGGAGAG+AGG	0.671356	3_1:-75470848	Msa0375680:CDS
TGTGGTAGAATCCACGCACG+TGG	0.679284	3_1:+75472249	None:intergenic
TCGCTGTCATCGTCTCTGTG+GGG	0.704169	3_1:+75470726	None:intergenic
TGATCGATGAACTCATCCGA+CGG	0.705040	3_1:+75472045	None:intergenic
GCTGCCACTAGCCAAACCAG+TGG	0.706140	3_1:-75472112	Msa0375680:CDS
GAGTCTGGCAACAAATCATG+TGG	0.719794	3_1:+75472075	None:intergenic
AGTGGGTGACATGATCACCG+AGG	0.783297	3_1:-75471965	Msa0375680:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTCTATATATAAGTAAAATT+TGG	-	chr3_1:75472148-75472167	Msa0375680:CDS	10.0%
!!	TCTATATATAAGTAAAATTT+GGG	-	chr3_1:75472149-75472168	Msa0375680:CDS	10.0%
!!	TTTAATATATAAACTAAAAC+TGG	+	chr3_1:75472261-75472280	None:intergenic	10.0%
!!	TTCTATATATAAGTAAAATT+TGG	-	chr3_1:75472148-75472167	Msa0375680:CDS	10.0%
!!	TCTATATATAAGTAAAATTT+GGG	-	chr3_1:75472149-75472168	Msa0375680:CDS	10.0%
!!	TTTAATATATAAACTAAAAC+TGG	+	chr3_1:75472261-75472280	None:intergenic	10.0%
!!!	ATGATATTTTTTATACACAT+CGG	+	chr3_1:75470862-75470881	None:intergenic	15.0%
!!	CTTAATCATAAATGAAATAA+CGG	+	chr3_1:75471140-75471159	None:intergenic	15.0%
!!	TATTTCATTTATGATTAAGA+TGG	-	chr3_1:75471141-75471160	Msa0375680:intron	15.0%
!!	TAAAATTAATTGATTGCTTA+TGG	-	chr3_1:75471488-75471507	Msa0375680:intron	15.0%
!!!	ATGATATTTTTTATACACAT+CGG	+	chr3_1:75470862-75470881	None:intergenic	15.0%
!!	CTTAATCATAAATGAAATAA+CGG	+	chr3_1:75471140-75471159	None:intergenic	15.0%
!!	TATTTCATTTATGATTAAGA+TGG	-	chr3_1:75471141-75471160	Msa0375680:intron	15.0%
!!	TAAAATTAATTGATTGCTTA+TGG	-	chr3_1:75471488-75471507	Msa0375680:intron	15.0%
!!!	TTGAAAATTTCTTTCTTTTC+GGG	+	chr3_1:75470289-75470308	None:intergenic	20.0%
!!!	CTTGAAAATTTCTTTCTTTT+CGG	+	chr3_1:75470290-75470309	None:intergenic	20.0%
!!	AAAACTACAAAATAATCGTT+TGG	+	chr3_1:75470466-75470485	None:intergenic	20.0%
!!!	GATTATTTTGTAGTTTTAGT+GGG	-	chr3_1:75470469-75470488	Msa0375680:CDS	20.0%
!!!	ATATCTTTCCATATTCATTT+TGG	-	chr3_1:75471021-75471040	Msa0375680:intron	20.0%
!!!	TATCTTTCCATATTCATTTT+GGG	-	chr3_1:75471022-75471041	Msa0375680:intron	20.0%
!!!	TGGTAAAGATTTAAAAGTAT+GGG	+	chr3_1:75471050-75471069	None:intergenic	20.0%
!!	AAAAGTGGAAGAAATATTAT+AGG	-	chr3_1:75471089-75471108	Msa0375680:intron	20.0%
!!!	AGTCTAAAATAATTGTTACA+TGG	-	chr3_1:75471182-75471201	Msa0375680:intron	20.0%
!!	TACTTATATATAGAACTAGA+GGG	+	chr3_1:75472143-75472162	None:intergenic	20.0%
!!	TTACTTATATATAGAACTAG+AGG	+	chr3_1:75472144-75472163	None:intergenic	20.0%
!!	TAGTTTATATATTAAACCGA+AGG	-	chr3_1:75472265-75472284	Msa0375680:CDS	20.0%
!!	AGTTTATATATTAAACCGAA+GGG	-	chr3_1:75472266-75472285	Msa0375680:CDS	20.0%
!!!	TTGAAAATTTCTTTCTTTTC+GGG	+	chr3_1:75470289-75470308	None:intergenic	20.0%
!!!	CTTGAAAATTTCTTTCTTTT+CGG	+	chr3_1:75470290-75470309	None:intergenic	20.0%
!!	AAAACTACAAAATAATCGTT+TGG	+	chr3_1:75470466-75470485	None:intergenic	20.0%
!!!	GATTATTTTGTAGTTTTAGT+GGG	-	chr3_1:75470469-75470488	Msa0375680:CDS	20.0%
!!!	ATATCTTTCCATATTCATTT+TGG	-	chr3_1:75471021-75471040	Msa0375680:intron	20.0%
!!!	TATCTTTCCATATTCATTTT+GGG	-	chr3_1:75471022-75471041	Msa0375680:intron	20.0%
!!!	TGGTAAAGATTTAAAAGTAT+GGG	+	chr3_1:75471050-75471069	None:intergenic	20.0%
!!	AAAAGTGGAAGAAATATTAT+AGG	-	chr3_1:75471089-75471108	Msa0375680:intron	20.0%
!!!	AGTCTAAAATAATTGTTACA+TGG	-	chr3_1:75471182-75471201	Msa0375680:intron	20.0%
!!	TACTTATATATAGAACTAGA+GGG	+	chr3_1:75472143-75472162	None:intergenic	20.0%
!!	TTACTTATATATAGAACTAG+AGG	+	chr3_1:75472144-75472163	None:intergenic	20.0%
!!	TAGTTTATATATTAAACCGA+AGG	-	chr3_1:75472265-75472284	Msa0375680:CDS	20.0%
!!	AGTTTATATATTAAACCGAA+GGG	-	chr3_1:75472266-75472285	Msa0375680:CDS	20.0%
!	AATATATCAAGCAATGATGA+TGG	-	chr3_1:75470159-75470178	Msa0375680:three_prime_UTR	25.0%
!!!	CGATTATTTTGTAGTTTTAG+TGG	-	chr3_1:75470468-75470487	Msa0375680:CDS	25.0%
!	CAAAACATATCTCTATCTTT+CGG	-	chr3_1:75470642-75470661	Msa0375680:CDS	25.0%
!	AAAACATATCTCTATCTTTC+GGG	-	chr3_1:75470643-75470662	Msa0375680:CDS	25.0%
!	AATTTGTGTGGATCAATTTA+CGG	-	chr3_1:75470905-75470924	Msa0375680:CDS	25.0%
!!	ATCTTTCCATATTCATTTTG+GGG	-	chr3_1:75471023-75471042	Msa0375680:intron	25.0%
!	CTGGTAAAGATTTAAAAGTA+TGG	+	chr3_1:75471051-75471070	None:intergenic	25.0%
!	TTAAAATCAGAGAAGATATC+TGG	+	chr3_1:75471070-75471089	None:intergenic	25.0%
!!!	TCTTCTCTGATTTTAAAAAG+TGG	-	chr3_1:75471074-75471093	Msa0375680:intron	25.0%
!	TTACCAAAAAAATTGTGTGT+GGG	+	chr3_1:75471281-75471300	None:intergenic	25.0%
!	ATTACCAAAAAAATTGTGTG+TGG	+	chr3_1:75471282-75471301	None:intergenic	25.0%
!!!	ACAATTTTTTTGGTAATGCT+TGG	-	chr3_1:75471285-75471304	Msa0375680:intron	25.0%
!	ATTCTTACTTTGTTCCTTAA+AGG	-	chr3_1:75471362-75471381	Msa0375680:intron	25.0%
!	TTCTTACTTTGTTCCTTAAA+GGG	-	chr3_1:75471363-75471382	Msa0375680:intron	25.0%
!	ATCATCCATGTAAAAAAACA+GGG	+	chr3_1:75471448-75471467	None:intergenic	25.0%
!	TATCATCCATGTAAAAAAAC+AGG	+	chr3_1:75471449-75471468	None:intergenic	25.0%
!!	AATTTTTGTGCACTTTCATT+TGG	+	chr3_1:75472069-75472088	None:intergenic	25.0%
!	ATATTATAAGATACTCCCTT+CGG	+	chr3_1:75472284-75472303	None:intergenic	25.0%
!	AATATATCAAGCAATGATGA+TGG	-	chr3_1:75470159-75470178	Msa0375680:three_prime_UTR	25.0%
!!!	CGATTATTTTGTAGTTTTAG+TGG	-	chr3_1:75470468-75470487	Msa0375680:CDS	25.0%
!	CAAAACATATCTCTATCTTT+CGG	-	chr3_1:75470642-75470661	Msa0375680:CDS	25.0%
!	AAAACATATCTCTATCTTTC+GGG	-	chr3_1:75470643-75470662	Msa0375680:CDS	25.0%
!	AATTTGTGTGGATCAATTTA+CGG	-	chr3_1:75470905-75470924	Msa0375680:CDS	25.0%
!!	ATCTTTCCATATTCATTTTG+GGG	-	chr3_1:75471023-75471042	Msa0375680:intron	25.0%
!	CTGGTAAAGATTTAAAAGTA+TGG	+	chr3_1:75471051-75471070	None:intergenic	25.0%
!	TTAAAATCAGAGAAGATATC+TGG	+	chr3_1:75471070-75471089	None:intergenic	25.0%
!!!	TCTTCTCTGATTTTAAAAAG+TGG	-	chr3_1:75471074-75471093	Msa0375680:intron	25.0%
!	TTACCAAAAAAATTGTGTGT+GGG	+	chr3_1:75471281-75471300	None:intergenic	25.0%
!	ATTACCAAAAAAATTGTGTG+TGG	+	chr3_1:75471282-75471301	None:intergenic	25.0%
!!!	ACAATTTTTTTGGTAATGCT+TGG	-	chr3_1:75471285-75471304	Msa0375680:intron	25.0%
!	ATTCTTACTTTGTTCCTTAA+AGG	-	chr3_1:75471362-75471381	Msa0375680:intron	25.0%
!	TTCTTACTTTGTTCCTTAAA+GGG	-	chr3_1:75471363-75471382	Msa0375680:intron	25.0%
!	ATCATCCATGTAAAAAAACA+GGG	+	chr3_1:75471448-75471467	None:intergenic	25.0%
!	TATCATCCATGTAAAAAAAC+AGG	+	chr3_1:75471449-75471468	None:intergenic	25.0%
!!	AATTTTTGTGCACTTTCATT+TGG	+	chr3_1:75472069-75472088	None:intergenic	25.0%
!	ATATTATAAGATACTCCCTT+CGG	+	chr3_1:75472284-75472303	None:intergenic	25.0%
!!!	TTGGGATTTTAGGACTTTTT+GGG	+	chr3_1:75470248-75470267	None:intergenic	30.0%
!!!	TTTGGGATTTTAGGACTTTT+TGG	+	chr3_1:75470249-75470268	None:intergenic	30.0%
!!!	AGTATGTCTTTTGGGATTTT+AGG	+	chr3_1:75470258-75470277	None:intergenic	30.0%
!	AGACATTGAGTATGTCTTTT+GGG	+	chr3_1:75470266-75470285	None:intergenic	30.0%
!!!	TTTTCAAGTCATTAGAGAGT+TGG	-	chr3_1:75470302-75470321	Msa0375680:three_prime_UTR	30.0%
!	TTTCAAGTCATTAGAGAGTT+GGG	-	chr3_1:75470303-75470322	Msa0375680:three_prime_UTR	30.0%
	CATTCAAATGTGAATTTGTG+TGG	-	chr3_1:75470893-75470912	Msa0375680:CDS	30.0%
!	TAGACTTTTACAAAGAGAGA+GGG	+	chr3_1:75471168-75471187	None:intergenic	30.0%
!	TTAGACTTTTACAAAGAGAG+AGG	+	chr3_1:75471169-75471188	None:intergenic	30.0%
	TACCAAAAAAATTGTGTGTG+GGG	+	chr3_1:75471280-75471299	None:intergenic	30.0%
!!	TCCATCCATATGATTTTGAT+CGG	+	chr3_1:75471402-75471421	None:intergenic	30.0%
	GTAAAAAAACAGGGTAATGT+AGG	+	chr3_1:75471439-75471458	None:intergenic	30.0%
!!!	CATTACCCTGTTTTTTTACA+TGG	-	chr3_1:75471440-75471459	Msa0375680:intron	30.0%
	TAATTGATTGCTTATGGTGT+AGG	-	chr3_1:75471494-75471513	Msa0375680:intron	30.0%
!	GATCATTGCAAAATTTCTAG+AGG	-	chr3_1:75471698-75471717	Msa0375680:intron	30.0%
	AGATGAAACCTAAGTTTAGT+TGG	-	chr3_1:75472024-75472043	Msa0375680:CDS	30.0%
	GATGAAACCTAAGTTTAGTT+GGG	-	chr3_1:75472025-75472044	Msa0375680:CDS	30.0%
!!!	TTGGGATTTTAGGACTTTTT+GGG	+	chr3_1:75470248-75470267	None:intergenic	30.0%
!!!	TTTGGGATTTTAGGACTTTT+TGG	+	chr3_1:75470249-75470268	None:intergenic	30.0%
!!!	AGTATGTCTTTTGGGATTTT+AGG	+	chr3_1:75470258-75470277	None:intergenic	30.0%
!	AGACATTGAGTATGTCTTTT+GGG	+	chr3_1:75470266-75470285	None:intergenic	30.0%
!!!	TTTTCAAGTCATTAGAGAGT+TGG	-	chr3_1:75470302-75470321	Msa0375680:three_prime_UTR	30.0%
!	TTTCAAGTCATTAGAGAGTT+GGG	-	chr3_1:75470303-75470322	Msa0375680:three_prime_UTR	30.0%
	CATTCAAATGTGAATTTGTG+TGG	-	chr3_1:75470893-75470912	Msa0375680:CDS	30.0%
!	TAGACTTTTACAAAGAGAGA+GGG	+	chr3_1:75471168-75471187	None:intergenic	30.0%
!	TTAGACTTTTACAAAGAGAG+AGG	+	chr3_1:75471169-75471188	None:intergenic	30.0%
	TACCAAAAAAATTGTGTGTG+GGG	+	chr3_1:75471280-75471299	None:intergenic	30.0%
!!	TCCATCCATATGATTTTGAT+CGG	+	chr3_1:75471402-75471421	None:intergenic	30.0%
	GTAAAAAAACAGGGTAATGT+AGG	+	chr3_1:75471439-75471458	None:intergenic	30.0%
!!!	CATTACCCTGTTTTTTTACA+TGG	-	chr3_1:75471440-75471459	Msa0375680:intron	30.0%
	TAATTGATTGCTTATGGTGT+AGG	-	chr3_1:75471494-75471513	Msa0375680:intron	30.0%
!	GATCATTGCAAAATTTCTAG+AGG	-	chr3_1:75471698-75471717	Msa0375680:intron	30.0%
	AGATGAAACCTAAGTTTAGT+TGG	-	chr3_1:75472024-75472043	Msa0375680:CDS	30.0%
	GATGAAACCTAAGTTTAGTT+GGG	-	chr3_1:75472025-75472044	Msa0375680:CDS	30.0%
!!!	ATTTTAGGACTTTTTGGGAC+GGG	+	chr3_1:75470243-75470262	None:intergenic	35.0%
!!!	GATTTTAGGACTTTTTGGGA+CGG	+	chr3_1:75470244-75470263	None:intergenic	35.0%
!	GAGACATTGAGTATGTCTTT+TGG	+	chr3_1:75470267-75470286	None:intergenic	35.0%
	TTAAACCATGATTGGTACGT+TGG	+	chr3_1:75470520-75470539	None:intergenic	35.0%
	ATCCAATACTTGATTAGAGC+TGG	-	chr3_1:75470697-75470716	Msa0375680:CDS	35.0%
	CATGCAAATACTCACATAAG+AGG	+	chr3_1:75470980-75470999	None:intergenic	35.0%
!	AGACTTTTACAAAGAGAGAG+GGG	+	chr3_1:75471167-75471186	None:intergenic	35.0%
!!!	TTCCCCACACACAATTTTTT+TGG	-	chr3_1:75471275-75471294	Msa0375680:intron	35.0%
	ATGTGTAGAATGGATGAATG+TGG	+	chr3_1:75471315-75471334	None:intergenic	35.0%
	CATTCATCCATTCTACACAT+TGG	-	chr3_1:75471315-75471334	Msa0375680:intron	35.0%
	ATCCATTCTACACATTGGAT+CGG	-	chr3_1:75471320-75471339	Msa0375680:intron	35.0%
!!	CCATCCATATGATTTTGATC+GGG	+	chr3_1:75471401-75471420	None:intergenic	35.0%
	TTGCTTATGGTGTAGGATAT+AGG	-	chr3_1:75471501-75471520	Msa0375680:intron	35.0%
	AACAGGAAGTAATCCATACA+AGG	-	chr3_1:75471524-75471543	Msa0375680:intron	35.0%
!	CATTGCAAAATTTCTAGAGG+TGG	-	chr3_1:75471701-75471720	Msa0375680:intron	35.0%
	AGTAACCATATAACAATGCC+CGG	-	chr3_1:75471762-75471781	Msa0375680:CDS	35.0%
	AGAAATGACTGAATAGGTGT+GGG	+	chr3_1:75471812-75471831	None:intergenic	35.0%
!!!	ATTTTAGGACTTTTTGGGAC+GGG	+	chr3_1:75470243-75470262	None:intergenic	35.0%
!!!	GATTTTAGGACTTTTTGGGA+CGG	+	chr3_1:75470244-75470263	None:intergenic	35.0%
!	GAGACATTGAGTATGTCTTT+TGG	+	chr3_1:75470267-75470286	None:intergenic	35.0%
	TTAAACCATGATTGGTACGT+TGG	+	chr3_1:75470520-75470539	None:intergenic	35.0%
	ATCCAATACTTGATTAGAGC+TGG	-	chr3_1:75470697-75470716	Msa0375680:CDS	35.0%
	CATGCAAATACTCACATAAG+AGG	+	chr3_1:75470980-75470999	None:intergenic	35.0%
!	AGACTTTTACAAAGAGAGAG+GGG	+	chr3_1:75471167-75471186	None:intergenic	35.0%
!!!	TTCCCCACACACAATTTTTT+TGG	-	chr3_1:75471275-75471294	Msa0375680:intron	35.0%
	ATGTGTAGAATGGATGAATG+TGG	+	chr3_1:75471315-75471334	None:intergenic	35.0%
	CATTCATCCATTCTACACAT+TGG	-	chr3_1:75471315-75471334	Msa0375680:intron	35.0%
	ATCCATTCTACACATTGGAT+CGG	-	chr3_1:75471320-75471339	Msa0375680:intron	35.0%
!!	CCATCCATATGATTTTGATC+GGG	+	chr3_1:75471401-75471420	None:intergenic	35.0%
	TTGCTTATGGTGTAGGATAT+AGG	-	chr3_1:75471501-75471520	Msa0375680:intron	35.0%
	AACAGGAAGTAATCCATACA+AGG	-	chr3_1:75471524-75471543	Msa0375680:intron	35.0%
!	CATTGCAAAATTTCTAGAGG+TGG	-	chr3_1:75471701-75471720	Msa0375680:intron	35.0%
	AGTAACCATATAACAATGCC+CGG	-	chr3_1:75471762-75471781	Msa0375680:CDS	35.0%
	AGAAATGACTGAATAGGTGT+GGG	+	chr3_1:75471812-75471831	None:intergenic	35.0%
	ATGGCAATGTGCACTCAATT+AGG	-	chr3_1:75470178-75470197	Msa0375680:three_prime_UTR	40.0%
	TCTACCACAATGCCATCTAA+AGG	-	chr3_1:75470216-75470235	Msa0375680:three_prime_UTR	40.0%
!!!	TTTTAGGACTTTTTGGGACG+GGG	+	chr3_1:75470242-75470261	None:intergenic	40.0%
	TGAGTTCATCGATCAAGTGA+AGG	-	chr3_1:75470414-75470433	Msa0375680:CDS	40.0%
!!	TCGATCAAGTGAAGGCATTA+AGG	-	chr3_1:75470422-75470441	Msa0375680:CDS	40.0%
!!	CGATCAAGTGAAGGCATTAA+GGG	-	chr3_1:75470423-75470442	Msa0375680:CDS	40.0%
	CCAGTCTGTTAAACCATGAT+TGG	+	chr3_1:75470528-75470547	None:intergenic	40.0%
	CCAATCATGGTTTAACAGAC+TGG	-	chr3_1:75470525-75470544	Msa0375680:CDS	40.0%
	TCATGGTTTAACAGACTGGA+TGG	-	chr3_1:75470529-75470548	Msa0375680:CDS	40.0%
	CATGGTTTAACAGACTGGAT+GGG	-	chr3_1:75470530-75470549	Msa0375680:CDS	40.0%
	ATGGTTTAACAGACTGGATG+GGG	-	chr3_1:75470531-75470550	Msa0375680:CDS	40.0%
!	CATATCTCTATCTTTCGGGT+CGG	-	chr3_1:75470647-75470666	Msa0375680:CDS	40.0%
!	ATATCTCTATCTTTCGGGTC+GGG	-	chr3_1:75470648-75470667	Msa0375680:CDS	40.0%
!	TGCCAGCTCTAATCAAGTAT+TGG	+	chr3_1:75470702-75470721	None:intergenic	40.0%
	ATACTTGATTAGAGCTGGCA+TGG	-	chr3_1:75470702-75470721	Msa0375680:CDS	40.0%
	ATGGGACCCCAAAATGAATA+TGG	+	chr3_1:75471032-75471051	None:intergenic	40.0%
!	TTCCTTAAAGGGTGTGAATG+TGG	-	chr3_1:75471374-75471393	Msa0375680:intron	40.0%
!	TCCTTAAAGGGTGTGAATGT+GGG	-	chr3_1:75471375-75471394	Msa0375680:intron	40.0%
	CCCGATCAAAATCATATGGA+TGG	-	chr3_1:75471398-75471417	Msa0375680:intron	40.0%
	AAACAGGGTAATGTAGGTGA+TGG	+	chr3_1:75471433-75471452	None:intergenic	40.0%
	ATGGTGTAGGATATAGGAAC+AGG	-	chr3_1:75471507-75471526	Msa0375680:intron	40.0%
!	GCATAAGCAAAAGCCTTGTA+TGG	+	chr3_1:75471540-75471559	None:intergenic	40.0%
	GAGAAATGACTGAATAGGTG+TGG	+	chr3_1:75471813-75471832	None:intergenic	40.0%
	CTGCAGAGAAATGACTGAAT+AGG	+	chr3_1:75471818-75471837	None:intergenic	40.0%
	ATTCAGTCATTTCTCTGCAG+TGG	-	chr3_1:75471818-75471837	Msa0375680:CDS	40.0%
!	ACAACGTATTGGTGTGTACA+CGG	-	chr3_1:75471842-75471861	Msa0375680:CDS	40.0%
	TAGTGACTACATCGATAGCT+TGG	-	chr3_1:75471866-75471885	Msa0375680:CDS	40.0%
	GATAGCTTGGAGTTCTTGAT+TGG	-	chr3_1:75471879-75471898	Msa0375680:CDS	40.0%
	TCGAAGACCCAACTAAACTT+AGG	+	chr3_1:75472035-75472054	None:intergenic	40.0%
	ATGGCAATGTGCACTCAATT+AGG	-	chr3_1:75470178-75470197	Msa0375680:three_prime_UTR	40.0%
	TCTACCACAATGCCATCTAA+AGG	-	chr3_1:75470216-75470235	Msa0375680:three_prime_UTR	40.0%
!!!	TTTTAGGACTTTTTGGGACG+GGG	+	chr3_1:75470242-75470261	None:intergenic	40.0%
	TGAGTTCATCGATCAAGTGA+AGG	-	chr3_1:75470414-75470433	Msa0375680:CDS	40.0%
!!	TCGATCAAGTGAAGGCATTA+AGG	-	chr3_1:75470422-75470441	Msa0375680:CDS	40.0%
!!	CGATCAAGTGAAGGCATTAA+GGG	-	chr3_1:75470423-75470442	Msa0375680:CDS	40.0%
	CCAGTCTGTTAAACCATGAT+TGG	+	chr3_1:75470528-75470547	None:intergenic	40.0%
	CCAATCATGGTTTAACAGAC+TGG	-	chr3_1:75470525-75470544	Msa0375680:CDS	40.0%
	TCATGGTTTAACAGACTGGA+TGG	-	chr3_1:75470529-75470548	Msa0375680:CDS	40.0%
	CATGGTTTAACAGACTGGAT+GGG	-	chr3_1:75470530-75470549	Msa0375680:CDS	40.0%
	ATGGTTTAACAGACTGGATG+GGG	-	chr3_1:75470531-75470550	Msa0375680:CDS	40.0%
!	CATATCTCTATCTTTCGGGT+CGG	-	chr3_1:75470647-75470666	Msa0375680:CDS	40.0%
!	ATATCTCTATCTTTCGGGTC+GGG	-	chr3_1:75470648-75470667	Msa0375680:CDS	40.0%
!	TGCCAGCTCTAATCAAGTAT+TGG	+	chr3_1:75470702-75470721	None:intergenic	40.0%
	ATACTTGATTAGAGCTGGCA+TGG	-	chr3_1:75470702-75470721	Msa0375680:CDS	40.0%
	ATGGGACCCCAAAATGAATA+TGG	+	chr3_1:75471032-75471051	None:intergenic	40.0%
!	TTCCTTAAAGGGTGTGAATG+TGG	-	chr3_1:75471374-75471393	Msa0375680:intron	40.0%
!	TCCTTAAAGGGTGTGAATGT+GGG	-	chr3_1:75471375-75471394	Msa0375680:intron	40.0%
	CCCGATCAAAATCATATGGA+TGG	-	chr3_1:75471398-75471417	Msa0375680:intron	40.0%
	AAACAGGGTAATGTAGGTGA+TGG	+	chr3_1:75471433-75471452	None:intergenic	40.0%
	ATGGTGTAGGATATAGGAAC+AGG	-	chr3_1:75471507-75471526	Msa0375680:intron	40.0%
!	GCATAAGCAAAAGCCTTGTA+TGG	+	chr3_1:75471540-75471559	None:intergenic	40.0%
	GAGAAATGACTGAATAGGTG+TGG	+	chr3_1:75471813-75471832	None:intergenic	40.0%
	CTGCAGAGAAATGACTGAAT+AGG	+	chr3_1:75471818-75471837	None:intergenic	40.0%
	ATTCAGTCATTTCTCTGCAG+TGG	-	chr3_1:75471818-75471837	Msa0375680:CDS	40.0%
!	ACAACGTATTGGTGTGTACA+CGG	-	chr3_1:75471842-75471861	Msa0375680:CDS	40.0%
	TAGTGACTACATCGATAGCT+TGG	-	chr3_1:75471866-75471885	Msa0375680:CDS	40.0%
	GATAGCTTGGAGTTCTTGAT+TGG	-	chr3_1:75471879-75471898	Msa0375680:CDS	40.0%
	TCGAAGACCCAACTAAACTT+AGG	+	chr3_1:75472035-75472054	None:intergenic	40.0%
	GAGTCTGGCAACAAATCATG+TGG	+	chr3_1:75470379-75470398	None:intergenic	45.0%
	TGATCGATGAACTCATCCGA+CGG	+	chr3_1:75470409-75470428	None:intergenic	45.0%
!!	GAAGGCATTAAGGGATCGAA+CGG	-	chr3_1:75470432-75470451	Msa0375680:CDS	45.0%
	CATTGCCAACGTACCAATCA+TGG	-	chr3_1:75470512-75470531	Msa0375680:CDS	45.0%
	TTTAACAGACTGGATGGGGT+TGG	-	chr3_1:75470535-75470554	Msa0375680:CDS	45.0%
	TGGTTCAAGCACCAATCCAT+GGG	-	chr3_1:75470567-75470586	Msa0375680:CDS	45.0%
	GACCGATCCAATGTGTAGAA+TGG	+	chr3_1:75471325-75471344	None:intergenic	45.0%
	TGGGCCCGATCAAAATCATA+TGG	-	chr3_1:75471394-75471413	Msa0375680:intron	45.0%
	CCACATATACATGCAAGCGT+TGG	+	chr3_1:75471633-75471652	None:intergenic	45.0%
	CCAACGCTTGCATGTATATG+TGG	-	chr3_1:75471630-75471649	Msa0375680:intron	45.0%
	TCCTCTCATATGCAATCTCG+TGG	+	chr3_1:75471680-75471699	None:intergenic	45.0%
!	AGTGTCCGGGCATTGTTATA+TGG	+	chr3_1:75471770-75471789	None:intergenic	45.0%
	ACCATCATGCATCAAGTGTC+CGG	+	chr3_1:75471784-75471803	None:intergenic	45.0%
	TGGAGTTCTTGATTGGACGT+TGG	-	chr3_1:75471886-75471905	Msa0375680:CDS	45.0%
	CTTGATTGGACGTTGGAGAT+TGG	-	chr3_1:75471893-75471912	Msa0375680:CDS	45.0%
	TTGGAGATTGGAGAAGCTAG+AGG	-	chr3_1:75471905-75471924	Msa0375680:CDS	45.0%
	TGGAGATTGGAGAAGCTAGA+GGG	-	chr3_1:75471906-75471925	Msa0375680:CDS	45.0%
	TCTTGCAGCCTCCTAATCTT+GGG	+	chr3_1:75471981-75472000	None:intergenic	45.0%
	GAGTCTGGCAACAAATCATG+TGG	+	chr3_1:75470379-75470398	None:intergenic	45.0%
	TGATCGATGAACTCATCCGA+CGG	+	chr3_1:75470409-75470428	None:intergenic	45.0%
!!	GAAGGCATTAAGGGATCGAA+CGG	-	chr3_1:75470432-75470451	Msa0375680:CDS	45.0%
	CATTGCCAACGTACCAATCA+TGG	-	chr3_1:75470512-75470531	Msa0375680:CDS	45.0%
	TTTAACAGACTGGATGGGGT+TGG	-	chr3_1:75470535-75470554	Msa0375680:CDS	45.0%
	TGGTTCAAGCACCAATCCAT+GGG	-	chr3_1:75470567-75470586	Msa0375680:CDS	45.0%
	GACCGATCCAATGTGTAGAA+TGG	+	chr3_1:75471325-75471344	None:intergenic	45.0%
	TGGGCCCGATCAAAATCATA+TGG	-	chr3_1:75471394-75471413	Msa0375680:intron	45.0%
	CCACATATACATGCAAGCGT+TGG	+	chr3_1:75471633-75471652	None:intergenic	45.0%
	CCAACGCTTGCATGTATATG+TGG	-	chr3_1:75471630-75471649	Msa0375680:intron	45.0%
	TCCTCTCATATGCAATCTCG+TGG	+	chr3_1:75471680-75471699	None:intergenic	45.0%
!	AGTGTCCGGGCATTGTTATA+TGG	+	chr3_1:75471770-75471789	None:intergenic	45.0%
	ACCATCATGCATCAAGTGTC+CGG	+	chr3_1:75471784-75471803	None:intergenic	45.0%
	TGGAGTTCTTGATTGGACGT+TGG	-	chr3_1:75471886-75471905	Msa0375680:CDS	45.0%
	CTTGATTGGACGTTGGAGAT+TGG	-	chr3_1:75471893-75471912	Msa0375680:CDS	45.0%
	TTGGAGATTGGAGAAGCTAG+AGG	-	chr3_1:75471905-75471924	Msa0375680:CDS	45.0%
	TGGAGATTGGAGAAGCTAGA+GGG	-	chr3_1:75471906-75471925	Msa0375680:CDS	45.0%
	TCTTGCAGCCTCCTAATCTT+GGG	+	chr3_1:75471981-75472000	None:intergenic	45.0%
!	CCAACATTCCTCCACTGGTT+TGG	+	chr3_1:75470353-75470372	None:intergenic	50.0%
	CCAAACCAGTGGAGGAATGT+TGG	-	chr3_1:75470350-75470369	Msa0375680:three_prime_UTR	50.0%
	GTACGTTGGCAATGCTTCCT+CGG	+	chr3_1:75470506-75470525	None:intergenic	50.0%
	CTGGTTCAAGCACCAATCCA+TGG	-	chr3_1:75470566-75470585	Msa0375680:CDS	50.0%
	TGTCCATACAGCCCATGGAT+TGG	+	chr3_1:75470581-75470600	None:intergenic	50.0%
	TGTATGGACACGCTCTTGGA+CGG	-	chr3_1:75470591-75470610	Msa0375680:CDS	50.0%
!!	GGGTCGGGTTGATATGTTCA+TGG	-	chr3_1:75470663-75470682	Msa0375680:CDS	50.0%
	GCCCACATTCACACCCTTTA+AGG	+	chr3_1:75471379-75471398	None:intergenic	50.0%
	AAAAGTGGCTCGCTCTTGGA+AGG	+	chr3_1:75471565-75471584	None:intergenic	50.0%
	ACAGAAAAGTGGCTCGCTCT+TGG	+	chr3_1:75471569-75471588	None:intergenic	50.0%
!!!	CGAGCCACTTTTCTGTCAGA+CGG	-	chr3_1:75471573-75471592	Msa0375680:intron	50.0%
!	TTTTCTGTCAGACGGCAGCA+TGG	-	chr3_1:75471581-75471600	Msa0375680:intron	50.0%
	GCCACGAGATTGCATATGAG+AGG	-	chr3_1:75471676-75471695	Msa0375680:intron	50.0%
	ATCGCTGTCATCGTCTCTGT+GGG	+	chr3_1:75471729-75471748	None:intergenic	50.0%
	TATCGCTGTCATCGTCTCTG+TGG	+	chr3_1:75471730-75471749	None:intergenic	50.0%
	CCATCATGCATCAAGTGTCC+GGG	+	chr3_1:75471783-75471802	None:intergenic	50.0%
	TCTGCAGTGGCACAACGTAT+TGG	-	chr3_1:75471831-75471850	Msa0375680:CDS	50.0%
	CTAGAGGGTTTGACAAGCGA+GGG	-	chr3_1:75471921-75471940	Msa0375680:CDS	50.0%
	GTGCACAAGAGATCGTGTGT+GGG	-	chr3_1:75471949-75471968	Msa0375680:CDS	50.0%
	CTCTTGCAGCCTCCTAATCT+TGG	+	chr3_1:75471982-75472001	None:intergenic	50.0%
!	CCAACATTCCTCCACTGGTT+TGG	+	chr3_1:75470353-75470372	None:intergenic	50.0%
	CCAAACCAGTGGAGGAATGT+TGG	-	chr3_1:75470350-75470369	Msa0375680:three_prime_UTR	50.0%
	GTACGTTGGCAATGCTTCCT+CGG	+	chr3_1:75470506-75470525	None:intergenic	50.0%
	CTGGTTCAAGCACCAATCCA+TGG	-	chr3_1:75470566-75470585	Msa0375680:CDS	50.0%
	TGTCCATACAGCCCATGGAT+TGG	+	chr3_1:75470581-75470600	None:intergenic	50.0%
	TGTATGGACACGCTCTTGGA+CGG	-	chr3_1:75470591-75470610	Msa0375680:CDS	50.0%
!!	GGGTCGGGTTGATATGTTCA+TGG	-	chr3_1:75470663-75470682	Msa0375680:CDS	50.0%
	GCCCACATTCACACCCTTTA+AGG	+	chr3_1:75471379-75471398	None:intergenic	50.0%
	AAAAGTGGCTCGCTCTTGGA+AGG	+	chr3_1:75471565-75471584	None:intergenic	50.0%
	ACAGAAAAGTGGCTCGCTCT+TGG	+	chr3_1:75471569-75471588	None:intergenic	50.0%
!!!	CGAGCCACTTTTCTGTCAGA+CGG	-	chr3_1:75471573-75471592	Msa0375680:intron	50.0%
!	TTTTCTGTCAGACGGCAGCA+TGG	-	chr3_1:75471581-75471600	Msa0375680:intron	50.0%
	GCCACGAGATTGCATATGAG+AGG	-	chr3_1:75471676-75471695	Msa0375680:intron	50.0%
	ATCGCTGTCATCGTCTCTGT+GGG	+	chr3_1:75471729-75471748	None:intergenic	50.0%
	TATCGCTGTCATCGTCTCTG+TGG	+	chr3_1:75471730-75471749	None:intergenic	50.0%
	CCATCATGCATCAAGTGTCC+GGG	+	chr3_1:75471783-75471802	None:intergenic	50.0%
	TCTGCAGTGGCACAACGTAT+TGG	-	chr3_1:75471831-75471850	Msa0375680:CDS	50.0%
	CTAGAGGGTTTGACAAGCGA+GGG	-	chr3_1:75471921-75471940	Msa0375680:CDS	50.0%
	GTGCACAAGAGATCGTGTGT+GGG	-	chr3_1:75471949-75471968	Msa0375680:CDS	50.0%
	CTCTTGCAGCCTCCTAATCT+TGG	+	chr3_1:75471982-75472001	None:intergenic	50.0%
	CTCAATTAGGACCACGTGCG+TGG	-	chr3_1:75470191-75470210	Msa0375680:three_prime_UTR	55.0%
	TGTGGTAGAATCCACGCACG+TGG	+	chr3_1:75470205-75470224	None:intergenic	55.0%
	GGGGCCTTTAGATGGCATTG+TGG	+	chr3_1:75470223-75470242	None:intergenic	55.0%
!	TTTGGGACGGGGCCTTTAGA+TGG	+	chr3_1:75470231-75470250	None:intergenic	55.0%
!!	TCCTCCACTGGTTTGGCTAG+TGG	+	chr3_1:75470346-75470365	None:intergenic	55.0%
	GCCAGACTCTTCACTACCGT+CGG	-	chr3_1:75470390-75470409	Msa0375680:exon	55.0%
	TCCGACGGTAGTGAAGAGTC+TGG	+	chr3_1:75470394-75470413	None:intergenic	55.0%
	AGTGGGTGACATGATCACCG+AGG	-	chr3_1:75470486-75470505	Msa0375680:CDS	55.0%
!	GCACCAATCCATGGGCTGTA+TGG	-	chr3_1:75470575-75470594	Msa0375680:CDS	55.0%
	CTTGGACGGCTGAGGAGAAT+AGG	-	chr3_1:75470605-75470624	Msa0375680:CDS	55.0%
	ACGGCTGAGGAGAATAGGCA+TGG	-	chr3_1:75470610-75470629	Msa0375680:CDS	55.0%
	GCTGCCGTCTGACAGAAAAG+TGG	+	chr3_1:75471580-75471599	None:intergenic	55.0%
!	CAGCATGGCTCGACTAGCTA+AGG	-	chr3_1:75471596-75471615	Msa0375680:intron	55.0%
!	GCTCGACTAGCTAAGGAGAG+AGG	-	chr3_1:75471603-75471622	Msa0375680:intron	55.0%
	TCGCTGTCATCGTCTCTGTG+GGG	+	chr3_1:75471728-75471747	None:intergenic	55.0%
	CCCGGACACTTGATGCATGA+TGG	-	chr3_1:75471780-75471799	Msa0375680:CDS	55.0%
	GCTAGAGGGTTTGACAAGCG+AGG	-	chr3_1:75471920-75471939	Msa0375680:CDS	55.0%
	CGTGCACAAGAGATCGTGTG+TGG	-	chr3_1:75471948-75471967	Msa0375680:CDS	55.0%
	GTGGGCTTGCACCCAAGATT+AGG	-	chr3_1:75471967-75471986	Msa0375680:CDS	55.0%
	GGCTTGCACCCAAGATTAGG+AGG	-	chr3_1:75471970-75471989	Msa0375680:CDS	55.0%
	CTCAATTAGGACCACGTGCG+TGG	-	chr3_1:75470191-75470210	Msa0375680:three_prime_UTR	55.0%
	TGTGGTAGAATCCACGCACG+TGG	+	chr3_1:75470205-75470224	None:intergenic	55.0%
	GGGGCCTTTAGATGGCATTG+TGG	+	chr3_1:75470223-75470242	None:intergenic	55.0%
!	TTTGGGACGGGGCCTTTAGA+TGG	+	chr3_1:75470231-75470250	None:intergenic	55.0%
!!	TCCTCCACTGGTTTGGCTAG+TGG	+	chr3_1:75470346-75470365	None:intergenic	55.0%
	GCCAGACTCTTCACTACCGT+CGG	-	chr3_1:75470390-75470409	Msa0375680:exon	55.0%
	TCCGACGGTAGTGAAGAGTC+TGG	+	chr3_1:75470394-75470413	None:intergenic	55.0%
	AGTGGGTGACATGATCACCG+AGG	-	chr3_1:75470486-75470505	Msa0375680:CDS	55.0%
!	GCACCAATCCATGGGCTGTA+TGG	-	chr3_1:75470575-75470594	Msa0375680:CDS	55.0%
	CTTGGACGGCTGAGGAGAAT+AGG	-	chr3_1:75470605-75470624	Msa0375680:CDS	55.0%
	ACGGCTGAGGAGAATAGGCA+TGG	-	chr3_1:75470610-75470629	Msa0375680:CDS	55.0%
	GCTGCCGTCTGACAGAAAAG+TGG	+	chr3_1:75471580-75471599	None:intergenic	55.0%
!	CAGCATGGCTCGACTAGCTA+AGG	-	chr3_1:75471596-75471615	Msa0375680:intron	55.0%
!	GCTCGACTAGCTAAGGAGAG+AGG	-	chr3_1:75471603-75471622	Msa0375680:intron	55.0%
	TCGCTGTCATCGTCTCTGTG+GGG	+	chr3_1:75471728-75471747	None:intergenic	55.0%
	CCCGGACACTTGATGCATGA+TGG	-	chr3_1:75471780-75471799	Msa0375680:CDS	55.0%
	GCTAGAGGGTTTGACAAGCG+AGG	-	chr3_1:75471920-75471939	Msa0375680:CDS	55.0%
	CGTGCACAAGAGATCGTGTG+TGG	-	chr3_1:75471948-75471967	Msa0375680:CDS	55.0%
	GTGGGCTTGCACCCAAGATT+AGG	-	chr3_1:75471967-75471986	Msa0375680:CDS	55.0%
	GGCTTGCACCCAAGATTAGG+AGG	-	chr3_1:75471970-75471989	Msa0375680:CDS	55.0%
	GCTGCCACTAGCCAAACCAG+TGG	-	chr3_1:75470339-75470358	Msa0375680:three_prime_UTR	60.0%
	GCCACTAGCCAAACCAGTGG+AGG	-	chr3_1:75470342-75470361	Msa0375680:three_prime_UTR	60.0%
	GGCTGCCAACATTCCTCCAC+TGG	+	chr3_1:75470358-75470377	None:intergenic	60.0%
	GATGGGGTTGGAGACGAGAC+TGG	-	chr3_1:75470547-75470566	Msa0375680:CDS	60.0%
	GAGCGTGTCCATACAGCCCA+TGG	+	chr3_1:75470586-75470605	None:intergenic	60.0%
	GGGCTGTATGGACACGCTCT+TGG	-	chr3_1:75470587-75470606	Msa0375680:CDS	60.0%
	GCTGCCACTAGCCAAACCAG+TGG	-	chr3_1:75470339-75470358	Msa0375680:three_prime_UTR	60.0%
	GCCACTAGCCAAACCAGTGG+AGG	-	chr3_1:75470342-75470361	Msa0375680:three_prime_UTR	60.0%
	GGCTGCCAACATTCCTCCAC+TGG	+	chr3_1:75470358-75470377	None:intergenic	60.0%
	GATGGGGTTGGAGACGAGAC+TGG	-	chr3_1:75470547-75470566	Msa0375680:CDS	60.0%
	GAGCGTGTCCATACAGCCCA+TGG	+	chr3_1:75470586-75470605	None:intergenic	60.0%
	GGGCTGTATGGACACGCTCT+TGG	-	chr3_1:75470587-75470606	Msa0375680:CDS	60.0%
	GACACGCTCTTGGACGGCTG+AGG	-	chr3_1:75470597-75470616	Msa0375680:CDS	65.0%
	GACACGCTCTTGGACGGCTG+AGG	-	chr3_1:75470597-75470616	Msa0375680:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_1	gene	75470152	75472321	75470152	ID=Msa0375680;Name=Msa0375680
chr3_1	mRNA	75470152	75472321	75470152	ID=Msa0375680-mRNA-1;Parent=Msa0375680;Name=Msa0375680-mRNA-1;_AED=0.03;_eAED=0.03;_QI=20\|1\|1\|1\|1\|1\|2\|248\|369
chr3_1	exon	75470152	75470957	75470152	ID=Msa0375680-mRNA-1:exon:17693;Parent=Msa0375680-mRNA-1
chr3_1	exon	75471750	75472321	75471750	ID=Msa0375680-mRNA-1:exon:17692;Parent=Msa0375680-mRNA-1
chr3_1	five_prime_UTR	75472302	75472321	75472302	ID=Msa0375680-mRNA-1:five_prime_utr;Parent=Msa0375680-mRNA-1
chr3_1	CDS	75471750	75472301	75471750	ID=Msa0375680-mRNA-1:cds;Parent=Msa0375680-mRNA-1
chr3_1	CDS	75470400	75470957	75470400	ID=Msa0375680-mRNA-1:cds;Parent=Msa0375680-mRNA-1
chr3_1	three_prime_UTR	75470152	75470399	75470152	ID=Msa0375680-mRNA-1:three_prime_utr;Parent=Msa0375680-mRNA-1

Gene Sequence

>Msa0375680

ATGATGATGGCAATGTGCACTCAATTAGGACCACGTGCGTGGATTCTACCACAATGCCATCTAAAGGCCCCGTCCCAAAAAGTCCTAAAATCCCAAAAGACATACTCAATGTCTCCCGAAAAGAAAGAAATTTTCAAGTCATTAGAGAGTTGGGTATCAGAAAGTGTGCTGCCACTAGCCAAACCAGTGGAGGAATGTTGGCAGCCACATGATTTGTTGCCAGACTCTTCACTACCGTCGGATGAGTTCATCGATCAAGTGAAGGCATTAAGGGATCGAACGGCTGAGCTTCCAAACGATTATTTTGTAGTTTTAGTGGGTGACATGATCACCGAGGAAGCATTGCCAACGTACCAATCATGGTTTAACAGACTGGATGGGGTTGGAGACGAGACTGGTTCAAGCACCAATCCATGGGCTGTATGGACACGCTCTTGGACGGCTGAGGAGAATAGGCATGGAGATTTGCTCAAAACATATCTCTATCTTTCGGGTCGGGTTGATATGTTCATGGTCGAAAAGACTATCCAATACTTGATTAGAGCTGGCATGGATATAGGAACAGGAAGTAATCCATACAAGGCTTTTGCTTATGCAACCTTCCAAGAGCGAGCCACTTTTCTGTCAGACGGCAGCATGGCTCGACTAGCTAAGGAGAGAGGTGATCCAACGCTTGCATGTATATGTGGCACGATTGCTGCAGACGAGAAGCGCCACGAGATTGCATATGAGAGGATCATTGCAAAATTTCTAGAGGTGGACCCCACAGAGACGATGACAGCGATAGCAGAAATTATGAGTAACCATATAACAATGCCCGGACACTTGATGCATGATGGTCAAGACCCACACCTATTCAGTCATTTCTCTGCAGTGGCACAACGTATTGGTGTGTACACGGTTAGTGACTACATCGATAGCTTGGAGTTCTTGATTGGACGTTGGAGATTGGAGAAGCTAGAGGGTTTGACAAGCGAGGGAAAGCGTGCACAAGAGATCGTGTGTGGGCTTGCACCCAAGATTAGGAGGCTGCAAGAGCGTGCTGATGAGCGAGCGAGAAAGATGAAACCTAAGTTTAGTTGGGTCTTCGATAAAGAGATGTCCAAATGA

Protein sequence

>Msa0375680

MMMAMCTQLGPRAWILPQCHLKAPSQKVLKSQKTYSMSPEKKEIFKSLESWVSESVLPLAKPVEECWQPHDLLPDSSLPSDEFIDQVKALRDRTAELPNDYFVVLVGDMITEEALPTYQSWFNRLDGVGDETGSSTNPWAVWTRSWTAEENRHGDLLKTYLYLSGRVDMFMVEKTIQYLIRAGMDIGTGSNPYKAFAYATFQERATFLSDGSMARLAKERGDPTLACICGTIAADEKRHEIAYERIIAKFLEVDPTETMTAIAEIMSNHITMPGHLMHDGQDPHLFSHFSAVAQRIGVYTVSDYIDSLEFLIGRWRLEKLEGLTSEGKRAQEIVCGLAPKIRRLQERADERARKMKPKFSWVFDKEMSK*