Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102740 | AFK47155.1 | 94.595 | 74 | 4 | 0 | 1 | 74 | 75 | 148 | 2.01e-44 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102740 | sp|Q9LHP1|RL74_ARATH | 88.571 | 70 | 8 | 0 | 5 | 74 | 175 | 244 | 4.83e-43 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102740 | I3T3R3 | 94.595 | 74 | 4 | 0 | 1 | 74 | 75 | 148 | 9.62e-45 | 149 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027230 | Msa1102740 | 0.823630 | 1.248738e-53 | -8.615850e-47 |
| Msa0032430 | Msa1102740 | 0.811889 | 5.585696e-51 | -8.615850e-47 |
| Msa0075220 | Msa1102740 | 0.806315 | 8.730157e-50 | -8.615850e-47 |
| Msa0090360 | Msa1102740 | 0.807533 | 4.824216e-50 | -8.615850e-47 |
| Msa0625720 | Msa1102740 | 0.814920 | 1.205147e-51 | -8.615850e-47 |
| Msa0662500 | Msa1102740 | 0.821600 | 3.704606e-53 | -8.615850e-47 |
| Msa0663390 | Msa1102740 | 0.832998 | 6.861911e-56 | -8.615850e-47 |
| Msa0663810 | Msa1102740 | 0.803201 | 3.902348e-49 | -8.615850e-47 |
| Msa0689260 | Msa1102740 | 0.809434 | 1.895915e-50 | -8.615850e-47 |
| Msa0692040 | Msa1102740 | -0.811768 | 5.934736e-51 | -8.615850e-47 |
| Msa0693370 | Msa1102740 | 0.811075 | 8.393063e-51 | -8.615850e-47 |
| Msa0711780 | Msa1102740 | 0.800035 | 1.740951e-48 | -8.615850e-47 |
| Msa0750880 | Msa1102740 | 0.816271 | 6.026844e-52 | -8.615850e-47 |
| Msa0788850 | Msa1102740 | 0.806923 | 6.497297e-50 | -8.615850e-47 |
| Msa0793800 | Msa1102740 | 0.806476 | 8.074691e-50 | -8.615850e-47 |
| Msa0808270 | Msa1102740 | 0.812539 | 4.029154e-51 | -8.615850e-47 |
| Msa0122970 | Msa1102740 | 0.805596 | 1.236595e-49 | -8.615850e-47 |
| Msa0140820 | Msa1102740 | 0.814865 | 1.238916e-51 | -8.615850e-47 |
| Msa0145440 | Msa1102740 | 0.810546 | 1.092574e-50 | -8.615850e-47 |
| Msa0148060 | Msa1102740 | 0.805635 | 1.213848e-49 | -8.615850e-47 |
| Msa0167520 | Msa1102740 | 0.804151 | 2.478634e-49 | -8.615850e-47 |
| Msa0169310 | Msa1102740 | 0.804411 | 2.188668e-49 | -8.615850e-47 |
| Msa0172070 | Msa1102740 | 0.809535 | 1.803603e-50 | -8.615850e-47 |
| Msa0184040 | Msa1102740 | 0.803665 | 3.127257e-49 | -8.615850e-47 |
| Msa0395820 | Msa1102740 | 0.846607 | 1.952690e-59 | -8.615850e-47 |
| Msa0428590 | Msa1102740 | 0.804014 | 2.647261e-49 | -8.615850e-47 |
| Msa0468330 | Msa1102740 | 0.812384 | 4.356407e-51 | -8.615850e-47 |
| Msa0481530 | Msa1102740 | 0.835905 | 1.278063e-56 | -8.615850e-47 |
| Msa1004550 | Msa1102740 | 0.806998 | 6.263219e-50 | -8.615850e-47 |
| Msa1004600 | Msa1102740 | 0.812060 | 5.126017e-51 | -8.615850e-47 |
| Msa1013400 | Msa1102740 | 0.812460 | 4.193703e-51 | -8.615850e-47 |
| Msa1081930 | Msa1102740 | 0.805387 | 1.368085e-49 | -8.615850e-47 |
| Msa1081980 | Msa1102740 | 0.802543 | 5.336953e-49 | -8.615850e-47 |
| Msa1093530 | Msa1102740 | 0.809921 | 1.489585e-50 | -8.615850e-47 |
| Msa1102740 | Msa1121440 | 0.802238 | 6.169158e-49 | -8.615850e-47 |
| Msa1102740 | Msa1147900 | 0.806184 | 9.306569e-50 | -8.615850e-47 |
| Msa1102740 | Msa1165940 | 0.807742 | 4.355809e-50 | -8.615850e-47 |
| Msa1102740 | Msa1209460 | 0.801650 | 8.147120e-49 | -8.615850e-47 |
| Msa1102740 | Msa1284550 | 0.806737 | 7.112983e-50 | -8.615850e-47 |
| Msa1102740 | Msa1353060 | 0.811900 | 5.553942e-51 | -8.615850e-47 |
| Msa1102740 | Msa1358250 | 0.808837 | 2.545057e-50 | -8.615850e-47 |
| Msa1102740 | Msa1382620 | 0.823249 | 1.532961e-53 | -8.615850e-47 |
| Msa1102740 | Msa1386780 | 0.821335 | 4.265307e-53 | -8.615850e-47 |
| Msa1102740 | Msa1392780 | 0.802322 | 5.928630e-49 | -8.615850e-47 |
| Msa1102740 | Msa1394290 | 0.801550 | 8.541440e-49 | -8.615850e-47 |
| Msa1102740 | Msa1451160 | 0.801650 | 8.147670e-49 | -8.615850e-47 |
| Msa1102740 | Msa1457920 | 0.807757 | 4.324193e-50 | -8.615850e-47 |
| Msa0249690 | Msa1102740 | 0.817999 | 2.463934e-52 | -8.615850e-47 |
| Msa0255090 | Msa1102740 | 0.805522 | 1.281839e-49 | -8.615850e-47 |
| Msa0259380 | Msa1102740 | 0.800750 | 1.244683e-48 | -8.615850e-47 |
| Msa0309750 | Msa1102740 | 0.802853 | 4.607047e-49 | -8.615850e-47 |
| Msa0518390 | Msa1102740 | 0.807314 | 5.368797e-50 | -8.615850e-47 |
| Msa0529890 | Msa1102740 | 0.818508 | 1.889924e-52 | -8.615850e-47 |
| Msa0557070 | Msa1102740 | 0.811703 | 6.131777e-51 | -8.615850e-47 |
| Msa0585560 | Msa1102740 | 0.832115 | 1.136054e-55 | -8.615850e-47 |
| Msa0592440 | Msa1102740 | 0.800465 | 1.423087e-48 | -8.615850e-47 |
| Msa0861870 | Msa1102740 | 0.801516 | 8.678487e-49 | -8.615850e-47 |
| Msa0902760 | Msa1102740 | 0.806310 | 8.751884e-50 | -8.615850e-47 |
| Msa0957110 | Msa1102740 | 0.848811 | 4.831348e-60 | -8.615850e-47 |
| Msa0974070 | Msa1102740 | 0.890446 | 9.783800e-74 | -8.615850e-47 |
| Msa0975340 | Msa1102740 | 0.801052 | 1.079792e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102740 | MtrunA17_Chr1g0155331 | 94.595 | 74 | 4 | 0 | 1 | 74 | 171 | 244 | 2.58e-48 | 152 |
| Msa1102740 | MtrunA17_Chr2g0298841 | 94.595 | 74 | 4 | 0 | 1 | 74 | 171 | 244 | 3.77e-48 | 152 |
| Msa1102740 | MtrunA17_Chr4g0002321 | 91.429 | 70 | 6 | 0 | 5 | 74 | 174 | 243 | 2.64e-44 | 142 |
| Msa1102740 | MtrunA17_Chr1g0155311 | 96.721 | 61 | 2 | 0 | 4 | 64 | 2 | 62 | 3.49e-39 | 123 |
| Msa1102740 | MtrunA17_Chr7g0237701 | 52.703 | 74 | 35 | 0 | 1 | 74 | 173 | 246 | 3.47e-25 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102740 | AT3G13580.5 | 88.571 | 70 | 8 | 0 | 5 | 74 | 175 | 244 | 4.91e-44 | 142 |
| Msa1102740 | AT3G13580.4 | 88.571 | 70 | 8 | 0 | 5 | 74 | 175 | 244 | 4.91e-44 | 142 |
| Msa1102740 | AT3G13580.2 | 88.571 | 70 | 8 | 0 | 5 | 74 | 175 | 244 | 4.91e-44 | 142 |
| Msa1102740 | AT3G13580.3 | 88.571 | 70 | 8 | 0 | 5 | 74 | 175 | 244 | 4.91e-44 | 142 |
| Msa1102740 | AT3G13580.1 | 88.571 | 70 | 8 | 0 | 5 | 74 | 175 | 244 | 4.91e-44 | 142 |
| Msa1102740 | AT3G13580.7 | 88.571 | 70 | 8 | 0 | 5 | 74 | 175 | 244 | 4.91e-44 | 142 |
| Msa1102740 | AT3G13580.8 | 88.571 | 70 | 8 | 0 | 5 | 74 | 175 | 244 | 4.91e-44 | 142 |
| Msa1102740 | AT3G13580.6 | 88.571 | 70 | 8 | 0 | 5 | 74 | 175 | 244 | 4.91e-44 | 142 |
| Msa1102740 | AT3G13580.9 | 88.571 | 70 | 8 | 0 | 5 | 74 | 175 | 244 | 4.91e-44 | 142 |
| Msa1102740 | AT2G01250.1 | 85.135 | 74 | 11 | 0 | 1 | 74 | 169 | 242 | 7.42e-44 | 141 |
| Msa1102740 | AT2G44120.1 | 84.722 | 72 | 11 | 0 | 3 | 74 | 171 | 242 | 8.83e-44 | 141 |
| Msa1102740 | AT2G44120.2 | 84.722 | 72 | 11 | 0 | 3 | 74 | 176 | 247 | 1.02e-43 | 141 |
| Msa1102740 | AT1G80750.1 | 50.667 | 75 | 36 | 1 | 1 | 74 | 173 | 247 | 1.38e-19 | 79.3 |
Find 25 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCATTAGAAGGATGAATT+AGG | 0.270598 | 7_3:+36688902 | Msa1102740:CDS |
| GTGTCGTTTAAGATTGATTA+TGG | 0.274625 | 7_3:+36688934 | Msa1102740:three_prime_UTR |
| TAGAAGGATGAATTAGGTTT+TGG | 0.280297 | 7_3:+36688908 | Msa1102740:exon |
| TTTCAAGCTCAAAGCTCCTT+TGG | 0.284641 | 7_3:+36688806 | Msa1102740:CDS |
| AGTGTTCAATTGCAGGTTCT+TGG | 0.317764 | 7_3:+36688693 | Msa1102740:intron |
| TTCAAGCTCAAAGCTCCTTT+GGG | 0.329811 | 7_3:+36688807 | Msa1102740:CDS |
| AAAACTTTCACTGCACTTGC+AGG | 0.373710 | 7_3:-36689055 | None:intergenic |
| AAGGTGGTGATGCTGGTAAC+AGG | 0.401808 | 7_3:+36688862 | Msa1102740:CDS |
| GTGTTCAATTGCAGGTTCTT+GGG | 0.403327 | 7_3:+36688694 | Msa1102740:intron |
| ACATCAATGAACTCATTAGA+AGG | 0.462677 | 7_3:+36688892 | Msa1102740:CDS |
| AAGAGAAATCACTATGTTGA+AGG | 0.489111 | 7_3:+36688843 | Msa1102740:CDS |
| AAAGGAGCTTTGAGCTTGAA+AGG | 0.504831 | 7_3:-36688804 | None:intergenic |
| GAGAGGCAAACAACTTCCTA+TGG | 0.504947 | 7_3:+36688781 | Msa1102740:CDS |
| TATGTTGAAGGTGGTGATGC+TGG | 0.533299 | 7_3:+36688855 | Msa1102740:CDS |
| TGAAGTGAGATCCAACAGTC+AGG | 0.533373 | 7_3:-36688758 | None:intergenic |
| ATCCACGAGATCCTGACTGT+TGG | 0.544264 | 7_3:+36688747 | Msa1102740:CDS |
| TTGCAGGTTCTTGGGAAACA+TGG | 0.547799 | 7_3:+36688702 | Msa1102740:intron |
| TTCTTCTTCATGCCACCCAA+AGG | 0.554983 | 7_3:-36688822 | None:intergenic |
| CTTTGAGCTTGAAAGGCCAT+AGG | 0.568033 | 7_3:-36688797 | None:intergenic |
| AAGCTCAAAGCTCCTTTGGG+TGG | 0.570830 | 7_3:+36688810 | Msa1102740:CDS |
| ATCCAACAGTCAGGATCTCG+TGG | 0.575620 | 7_3:-36688749 | None:intergenic |
| AGAAATCACTATGTTGAAGG+TGG | 0.637998 | 7_3:+36688846 | Msa1102740:CDS |
| AGGTGGTGATGCTGGTAACA+GGG | 0.651466 | 7_3:+36688863 | Msa1102740:CDS |
| TGTTGGATCTCACTTCAGAG+AGG | 0.724978 | 7_3:+36688764 | Msa1102740:CDS |
| TGGTGATGCTGGTAACAGGG+AGG | 0.745630 | 7_3:+36688866 | Msa1102740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAATATTCAAATTAAAA+AGG | - | chr7_3:36687959-36687978 | None:intergenic | 10.0% |
| !! | TATATTATATGAAAAGTAAA+TGG | - | chr7_3:36688131-36688150 | None:intergenic | 10.0% |
| !! | TAAGAATATTCAAATTAAAA+AGG | - | chr7_3:36687959-36687978 | None:intergenic | 10.0% |
| !! | TATATTATATGAAAAGTAAA+TGG | - | chr7_3:36688131-36688150 | None:intergenic | 10.0% |
| !!! | TTGTGTAGATAATTTTTTAT+TGG | + | chr7_3:36687890-36687909 | Msa1102740:intron | 15.0% |
| !!! | TAATTTTTTATTGGCTAATT+TGG | + | chr7_3:36687899-36687918 | Msa1102740:intron | 15.0% |
| !! | GAAAAAAAGAAAAATTTAAC+CGG | - | chr7_3:36688664-36688683 | None:intergenic | 15.0% |
| !!! | AAAATCTTTAAAAACAAAAC+TGG | - | chr7_3:36688987-36689006 | None:intergenic | 15.0% |
| !!! | TTGTGTAGATAATTTTTTAT+TGG | + | chr7_3:36687890-36687909 | Msa1102740:intron | 15.0% |
| !!! | TAATTTTTTATTGGCTAATT+TGG | + | chr7_3:36687899-36687918 | Msa1102740:intron | 15.0% |
| !! | GAAAAAAAGAAAAATTTAAC+CGG | - | chr7_3:36688664-36688683 | None:intergenic | 15.0% |
| !!! | AAAATCTTTAAAAACAAAAC+TGG | - | chr7_3:36688987-36689006 | None:intergenic | 15.0% |
| !!! | AATTAGCTATTGTTTGAAAT+TGG | + | chr7_3:36687790-36687809 | Msa1102740:intron | 20.0% |
| !! | ATTTGAATATTCTTATGTTC+TGG | + | chr7_3:36687964-36687983 | Msa1102740:intron | 20.0% |
| !! | TTCAAAATCAATAACTTCAA+AGG | - | chr7_3:36687999-36688018 | None:intergenic | 20.0% |
| !!! | AATTAGCTATTGTTTGAAAT+TGG | + | chr7_3:36687790-36687809 | Msa1102740:intron | 20.0% |
| !! | ATTTGAATATTCTTATGTTC+TGG | + | chr7_3:36687964-36687983 | Msa1102740:intron | 20.0% |
| !! | TTCAAAATCAATAACTTCAA+AGG | - | chr7_3:36687999-36688018 | None:intergenic | 20.0% |
| !!! | AAAGACTTTTTTTCGTTGAA+AGG | + | chr7_3:36687120-36687139 | Msa1102740:intron | 25.0% |
| !!! | TTTTTTTCGTTGAAAGGATA+TGG | + | chr7_3:36687126-36687145 | Msa1102740:intron | 25.0% |
| !!! | TTCTCCAATTGTTTGTTTTA+GGG | + | chr7_3:36687651-36687670 | Msa1102740:intron | 25.0% |
| ! | AAAACCCTAAAACAAACAAT+TGG | - | chr7_3:36687658-36687677 | None:intergenic | 25.0% |
| !!! | TTGTTTTAGGGTTTTAGAAT+TGG | + | chr7_3:36687663-36687682 | Msa1102740:intron | 25.0% |
| !!! | TGTTTTAGGGTTTTAGAATT+GGG | + | chr7_3:36687664-36687683 | Msa1102740:intron | 25.0% |
| ! | TTAGAATTGGGAATTGTTAA+CGG | + | chr7_3:36687676-36687695 | Msa1102740:intron | 25.0% |
| ! | TGCTTATTATTGTTCAGAAT+TGG | + | chr7_3:36687722-36687741 | Msa1102740:intron | 25.0% |
| ! | GCTTATTATTGTTCAGAATT+GGG | + | chr7_3:36687723-36687742 | Msa1102740:intron | 25.0% |
| !! | AATTGGTAATTGTTCAGATT+TGG | + | chr7_3:36687807-36687826 | Msa1102740:intron | 25.0% |
| !! | ATTGGTAATTGTTCAGATTT+GGG | + | chr7_3:36687808-36687827 | Msa1102740:intron | 25.0% |
| !!! | TTTTTTATTGGCTAATTTGG+TGG | + | chr7_3:36687902-36687921 | Msa1102740:intron | 25.0% |
| !!! | TTTGAAAATTCTAGTCTTGA+TGG | + | chr7_3:36688013-36688032 | Msa1102740:intron | 25.0% |
| ! | TGCTCAACAATATTTAAACA+GGG | - | chr7_3:36688161-36688180 | None:intergenic | 25.0% |
| ! | TGATGTATAATTGACACATT+CGG | - | chr7_3:36688344-36688363 | None:intergenic | 25.0% |
| ! | TGTGTCAATTATACATCATT+TGG | + | chr7_3:36688346-36688365 | Msa1102740:intron | 25.0% |
| ! | CAATTATACATCATTTGGAT+TGG | + | chr7_3:36688351-36688370 | Msa1102740:intron | 25.0% |
| ! | AAAATAGAGAACAAAGTACA+AGG | - | chr7_3:36688505-36688524 | None:intergenic | 25.0% |
| !!! | AAAGACTTTTTTTCGTTGAA+AGG | + | chr7_3:36687120-36687139 | Msa1102740:intron | 25.0% |
| !!! | TTTTTTTCGTTGAAAGGATA+TGG | + | chr7_3:36687126-36687145 | Msa1102740:intron | 25.0% |
| !!! | TTCTCCAATTGTTTGTTTTA+GGG | + | chr7_3:36687651-36687670 | Msa1102740:intron | 25.0% |
| ! | AAAACCCTAAAACAAACAAT+TGG | - | chr7_3:36687658-36687677 | None:intergenic | 25.0% |
| !!! | TTGTTTTAGGGTTTTAGAAT+TGG | + | chr7_3:36687663-36687682 | Msa1102740:intron | 25.0% |
| !!! | TGTTTTAGGGTTTTAGAATT+GGG | + | chr7_3:36687664-36687683 | Msa1102740:intron | 25.0% |
| ! | TTAGAATTGGGAATTGTTAA+CGG | + | chr7_3:36687676-36687695 | Msa1102740:intron | 25.0% |
| ! | TGCTTATTATTGTTCAGAAT+TGG | + | chr7_3:36687722-36687741 | Msa1102740:intron | 25.0% |
| ! | GCTTATTATTGTTCAGAATT+GGG | + | chr7_3:36687723-36687742 | Msa1102740:intron | 25.0% |
| !! | AATTGGTAATTGTTCAGATT+TGG | + | chr7_3:36687807-36687826 | Msa1102740:intron | 25.0% |
| !! | ATTGGTAATTGTTCAGATTT+GGG | + | chr7_3:36687808-36687827 | Msa1102740:intron | 25.0% |
| !!! | TTTTTTATTGGCTAATTTGG+TGG | + | chr7_3:36687902-36687921 | Msa1102740:intron | 25.0% |
| !!! | TTTGAAAATTCTAGTCTTGA+TGG | + | chr7_3:36688013-36688032 | Msa1102740:intron | 25.0% |
| ! | TGCTCAACAATATTTAAACA+GGG | - | chr7_3:36688161-36688180 | None:intergenic | 25.0% |
| ! | TGATGTATAATTGACACATT+CGG | - | chr7_3:36688344-36688363 | None:intergenic | 25.0% |
| ! | TGTGTCAATTATACATCATT+TGG | + | chr7_3:36688346-36688365 | Msa1102740:intron | 25.0% |
| ! | CAATTATACATCATTTGGAT+TGG | + | chr7_3:36688351-36688370 | Msa1102740:intron | 25.0% |
| ! | AAAATAGAGAACAAAGTACA+AGG | - | chr7_3:36688505-36688524 | None:intergenic | 25.0% |
| TAATAAAATGTGCCACACAA+GGG | - | chr7_3:36687218-36687237 | None:intergenic | 30.0% | |
| TTAATAAAATGTGCCACACA+AGG | - | chr7_3:36687219-36687238 | None:intergenic | 30.0% | |
| AGAGTTCAATTATACGAACA+TGG | - | chr7_3:36687524-36687543 | None:intergenic | 30.0% | |
| AGAGAAATTGGAGAATTGAT+AGG | - | chr7_3:36687627-36687646 | None:intergenic | 30.0% | |
| CTAAAACAAACAATTGGAGA+AGG | - | chr7_3:36687652-36687671 | None:intergenic | 30.0% | |
| !! | CTTCTCCAATTGTTTGTTTT+AGG | + | chr7_3:36687650-36687669 | Msa1102740:intron | 30.0% |
| TAGAATTGGGAATTGTTAAC+GGG | + | chr7_3:36687677-36687696 | Msa1102740:intron | 30.0% | |
| TCAGAATTGGGAATTGTTAA+TGG | + | chr7_3:36687735-36687754 | Msa1102740:intron | 30.0% | |
| CAGAATTGGGAATTGTTAAT+GGG | + | chr7_3:36687736-36687755 | Msa1102740:intron | 30.0% | |
| TCAGATTTGGGAATTGTTAA+TGG | + | chr7_3:36687820-36687839 | Msa1102740:intron | 30.0% | |
| CAGATTTGGGAATTGTTAAT+GGG | + | chr7_3:36687821-36687840 | Msa1102740:intron | 30.0% | |
| GTGCTCAACAATATTTAAAC+AGG | - | chr7_3:36688162-36688181 | None:intergenic | 30.0% | |
| TCCATTCTCATATTCATTAG+TGG | + | chr7_3:36688270-36688289 | Msa1102740:intron | 30.0% | |
| TTCAGAAACTCCAAATATGA+AGG | + | chr7_3:36688469-36688488 | Msa1102740:intron | 30.0% | |
| TAGAAGAACACCTTCATATT+TGG | - | chr7_3:36688482-36688501 | None:intergenic | 30.0% | |
| ! | TCTATTTTCATTCTCCTTGT+GGG | + | chr7_3:36688517-36688536 | Msa1102740:intron | 30.0% |
| AAGCATGATACTAAAGCATA+TGG | - | chr7_3:36688595-36688614 | None:intergenic | 30.0% | |
| AAGAGAAATCACTATGTTGA+AGG | + | chr7_3:36688843-36688862 | Msa1102740:CDS | 30.0% | |
| ACATCAATGAACTCATTAGA+AGG | + | chr7_3:36688892-36688911 | Msa1102740:CDS | 30.0% | |
| ACTCATTAGAAGGATGAATT+AGG | + | chr7_3:36688902-36688921 | Msa1102740:CDS | 30.0% | |
| ! | TAGAAGGATGAATTAGGTTT+TGG | + | chr7_3:36688908-36688927 | Msa1102740:exon | 30.0% |
| !! | GTGTCGTTTAAGATTGATTA+TGG | + | chr7_3:36688934-36688953 | Msa1102740:three_prime_UTR | 30.0% |
| TAATAAAATGTGCCACACAA+GGG | - | chr7_3:36687218-36687237 | None:intergenic | 30.0% | |
| TTAATAAAATGTGCCACACA+AGG | - | chr7_3:36687219-36687238 | None:intergenic | 30.0% | |
| AGAGTTCAATTATACGAACA+TGG | - | chr7_3:36687524-36687543 | None:intergenic | 30.0% | |
| AGAGAAATTGGAGAATTGAT+AGG | - | chr7_3:36687627-36687646 | None:intergenic | 30.0% | |
| CTAAAACAAACAATTGGAGA+AGG | - | chr7_3:36687652-36687671 | None:intergenic | 30.0% | |
| !! | CTTCTCCAATTGTTTGTTTT+AGG | + | chr7_3:36687650-36687669 | Msa1102740:intron | 30.0% |
| TAGAATTGGGAATTGTTAAC+GGG | + | chr7_3:36687677-36687696 | Msa1102740:intron | 30.0% | |
| TCAGAATTGGGAATTGTTAA+TGG | + | chr7_3:36687735-36687754 | Msa1102740:intron | 30.0% | |
| CAGAATTGGGAATTGTTAAT+GGG | + | chr7_3:36687736-36687755 | Msa1102740:intron | 30.0% | |
| TCAGATTTGGGAATTGTTAA+TGG | + | chr7_3:36687820-36687839 | Msa1102740:intron | 30.0% | |
| CAGATTTGGGAATTGTTAAT+GGG | + | chr7_3:36687821-36687840 | Msa1102740:intron | 30.0% | |
| GTGCTCAACAATATTTAAAC+AGG | - | chr7_3:36688162-36688181 | None:intergenic | 30.0% | |
| TCCATTCTCATATTCATTAG+TGG | + | chr7_3:36688270-36688289 | Msa1102740:intron | 30.0% | |
| TTCAGAAACTCCAAATATGA+AGG | + | chr7_3:36688469-36688488 | Msa1102740:intron | 30.0% | |
| TAGAAGAACACCTTCATATT+TGG | - | chr7_3:36688482-36688501 | None:intergenic | 30.0% | |
| ! | TCTATTTTCATTCTCCTTGT+GGG | + | chr7_3:36688517-36688536 | Msa1102740:intron | 30.0% |
| AAGCATGATACTAAAGCATA+TGG | - | chr7_3:36688595-36688614 | None:intergenic | 30.0% | |
| AAGAGAAATCACTATGTTGA+AGG | + | chr7_3:36688843-36688862 | Msa1102740:CDS | 30.0% | |
| ACATCAATGAACTCATTAGA+AGG | + | chr7_3:36688892-36688911 | Msa1102740:CDS | 30.0% | |
| ACTCATTAGAAGGATGAATT+AGG | + | chr7_3:36688902-36688921 | Msa1102740:CDS | 30.0% | |
| ! | TAGAAGGATGAATTAGGTTT+TGG | + | chr7_3:36688908-36688927 | Msa1102740:exon | 30.0% |
| !! | GTGTCGTTTAAGATTGATTA+TGG | + | chr7_3:36688934-36688953 | Msa1102740:three_prime_UTR | 30.0% |
| AATAAAATGTGCCACACAAG+GGG | - | chr7_3:36687217-36687236 | None:intergenic | 35.0% | |
| AAGAGAATAGTGTTGTGACA+TGG | - | chr7_3:36687272-36687291 | None:intergenic | 35.0% | |
| TTGAAATCTGAGGGCAATAA+CGG | - | chr7_3:36687426-36687445 | None:intergenic | 35.0% | |
| TTGGAGAAGGAAAGAGAAAT+TGG | - | chr7_3:36687639-36687658 | None:intergenic | 35.0% | |
| ! | ATGTGTTTTGCTGCTGATAA+TGG | - | chr7_3:36688237-36688256 | None:intergenic | 35.0% |
| GCCACTAATGAATATGAGAA+TGG | - | chr7_3:36688274-36688293 | None:intergenic | 35.0% | |
| CGGCAATAACAGATTAGTAT+AGG | - | chr7_3:36688324-36688343 | None:intergenic | 35.0% | |
| CGATTGTACTGTGTATTTGT+TGG | + | chr7_3:36688390-36688409 | Msa1102740:intron | 35.0% | |
| ! | TACTGTGTATTTGTTGGTTG+CGG | + | chr7_3:36688396-36688415 | Msa1102740:intron | 35.0% |
| CCAACTCTTCAATTTCATCT+AGG | - | chr7_3:36688429-36688448 | None:intergenic | 35.0% | |
| CCTAGATGAAATTGAAGAGT+TGG | + | chr7_3:36688426-36688445 | Msa1102740:intron | 35.0% | |
| ! | CTCTATTTTCATTCTCCTTG+TGG | + | chr7_3:36688516-36688535 | Msa1102740:intron | 35.0% |
| TGGCATGTCATCTGATAATA+TGG | + | chr7_3:36688548-36688567 | Msa1102740:intron | 35.0% | |
| GGCATGTCATCTGATAATAT+GGG | + | chr7_3:36688549-36688568 | Msa1102740:intron | 35.0% | |
| GCATGTCATCTGATAATATG+GGG | + | chr7_3:36688550-36688569 | Msa1102740:intron | 35.0% | |
| CATGATACTAAAGCATATGG+AGG | - | chr7_3:36688592-36688611 | None:intergenic | 35.0% | |
| AGTATCATGCTTTCGTAACT+TGG | + | chr7_3:36688603-36688622 | Msa1102740:intron | 35.0% | |
| AGAAATCACTATGTTGAAGG+TGG | + | chr7_3:36688846-36688865 | Msa1102740:CDS | 35.0% | |
| AATAAAATGTGCCACACAAG+GGG | - | chr7_3:36687217-36687236 | None:intergenic | 35.0% | |
| AAGAGAATAGTGTTGTGACA+TGG | - | chr7_3:36687272-36687291 | None:intergenic | 35.0% | |
| TTGAAATCTGAGGGCAATAA+CGG | - | chr7_3:36687426-36687445 | None:intergenic | 35.0% | |
| TTGGAGAAGGAAAGAGAAAT+TGG | - | chr7_3:36687639-36687658 | None:intergenic | 35.0% | |
| ! | ATGTGTTTTGCTGCTGATAA+TGG | - | chr7_3:36688237-36688256 | None:intergenic | 35.0% |
| GCCACTAATGAATATGAGAA+TGG | - | chr7_3:36688274-36688293 | None:intergenic | 35.0% | |
| CGGCAATAACAGATTAGTAT+AGG | - | chr7_3:36688324-36688343 | None:intergenic | 35.0% | |
| CGATTGTACTGTGTATTTGT+TGG | + | chr7_3:36688390-36688409 | Msa1102740:intron | 35.0% | |
| ! | TACTGTGTATTTGTTGGTTG+CGG | + | chr7_3:36688396-36688415 | Msa1102740:intron | 35.0% |
| CCAACTCTTCAATTTCATCT+AGG | - | chr7_3:36688429-36688448 | None:intergenic | 35.0% | |
| CCTAGATGAAATTGAAGAGT+TGG | + | chr7_3:36688426-36688445 | Msa1102740:intron | 35.0% | |
| ! | CTCTATTTTCATTCTCCTTG+TGG | + | chr7_3:36688516-36688535 | Msa1102740:intron | 35.0% |
| TGGCATGTCATCTGATAATA+TGG | + | chr7_3:36688548-36688567 | Msa1102740:intron | 35.0% | |
| GGCATGTCATCTGATAATAT+GGG | + | chr7_3:36688549-36688568 | Msa1102740:intron | 35.0% | |
| GCATGTCATCTGATAATATG+GGG | + | chr7_3:36688550-36688569 | Msa1102740:intron | 35.0% | |
| CATGATACTAAAGCATATGG+AGG | - | chr7_3:36688592-36688611 | None:intergenic | 35.0% | |
| AGTATCATGCTTTCGTAACT+TGG | + | chr7_3:36688603-36688622 | Msa1102740:intron | 35.0% | |
| AGAAATCACTATGTTGAAGG+TGG | + | chr7_3:36688846-36688865 | Msa1102740:CDS | 35.0% | |
| GTATCACCACTCTGATGAAT+AGG | - | chr7_3:36687160-36687179 | None:intergenic | 40.0% | |
| ATAAAATGTGCCACACAAGG+GGG | - | chr7_3:36687216-36687235 | None:intergenic | 40.0% | |
| ATAGTGTTGTGACATGGACT+TGG | - | chr7_3:36687266-36687285 | None:intergenic | 40.0% | |
| AAAGACGAGAGGAAAAGAGA+GGG | - | chr7_3:36687324-36687343 | None:intergenic | 40.0% | |
| TAAAGACGAGAGGAAAAGAG+AGG | - | chr7_3:36687325-36687344 | None:intergenic | 40.0% | |
| GCAGAGAAATTAAAGACGAG+AGG | - | chr7_3:36687335-36687354 | None:intergenic | 40.0% | |
| TATACGAACATGGATCTCGA+CGG | - | chr7_3:36687514-36687533 | None:intergenic | 40.0% | |
| !! | TTGGGAATTGTTAACGGGTT+AGG | + | chr7_3:36687682-36687701 | Msa1102740:intron | 40.0% |
| CATGCTTACTACTATGTTGC+CGG | + | chr7_3:36688642-36688661 | Msa1102740:intron | 40.0% | |
| CTGACATAGTGTTCAATTGC+AGG | + | chr7_3:36688686-36688705 | Msa1102740:intron | 40.0% | |
| AGTGTTCAATTGCAGGTTCT+TGG | + | chr7_3:36688693-36688712 | Msa1102740:intron | 40.0% | |
| GTGTTCAATTGCAGGTTCTT+GGG | + | chr7_3:36688694-36688713 | Msa1102740:intron | 40.0% | |
| !! | AAAGGAGCTTTGAGCTTGAA+AGG | - | chr7_3:36688807-36688826 | None:intergenic | 40.0% |
| TTTCAAGCTCAAAGCTCCTT+TGG | + | chr7_3:36688806-36688825 | Msa1102740:CDS | 40.0% | |
| TTCAAGCTCAAAGCTCCTTT+GGG | + | chr7_3:36688807-36688826 | Msa1102740:CDS | 40.0% | |
| AAAACTTTCACTGCACTTGC+AGG | - | chr7_3:36689058-36689077 | None:intergenic | 40.0% | |
| GTATCACCACTCTGATGAAT+AGG | - | chr7_3:36687160-36687179 | None:intergenic | 40.0% | |
| ATAAAATGTGCCACACAAGG+GGG | - | chr7_3:36687216-36687235 | None:intergenic | 40.0% | |
| ATAGTGTTGTGACATGGACT+TGG | - | chr7_3:36687266-36687285 | None:intergenic | 40.0% | |
| AAAGACGAGAGGAAAAGAGA+GGG | - | chr7_3:36687324-36687343 | None:intergenic | 40.0% | |
| TAAAGACGAGAGGAAAAGAG+AGG | - | chr7_3:36687325-36687344 | None:intergenic | 40.0% | |
| GCAGAGAAATTAAAGACGAG+AGG | - | chr7_3:36687335-36687354 | None:intergenic | 40.0% | |
| TATACGAACATGGATCTCGA+CGG | - | chr7_3:36687514-36687533 | None:intergenic | 40.0% | |
| !! | TTGGGAATTGTTAACGGGTT+AGG | + | chr7_3:36687682-36687701 | Msa1102740:intron | 40.0% |
| CATGCTTACTACTATGTTGC+CGG | + | chr7_3:36688642-36688661 | Msa1102740:intron | 40.0% | |
| CTGACATAGTGTTCAATTGC+AGG | + | chr7_3:36688686-36688705 | Msa1102740:intron | 40.0% | |
| AGTGTTCAATTGCAGGTTCT+TGG | + | chr7_3:36688693-36688712 | Msa1102740:intron | 40.0% | |
| GTGTTCAATTGCAGGTTCTT+GGG | + | chr7_3:36688694-36688713 | Msa1102740:intron | 40.0% | |
| !! | AAAGGAGCTTTGAGCTTGAA+AGG | - | chr7_3:36688807-36688826 | None:intergenic | 40.0% |
| TTTCAAGCTCAAAGCTCCTT+TGG | + | chr7_3:36688806-36688825 | Msa1102740:CDS | 40.0% | |
| TTCAAGCTCAAAGCTCCTTT+GGG | + | chr7_3:36688807-36688826 | Msa1102740:CDS | 40.0% | |
| AAAACTTTCACTGCACTTGC+AGG | - | chr7_3:36689058-36689077 | None:intergenic | 40.0% | |
| ACGATGCCTATTCATCAGAG+TGG | + | chr7_3:36687151-36687170 | Msa1102740:intron | 45.0% | |
| GGTGATACACATACCACCAT+AGG | + | chr7_3:36687172-36687191 | Msa1102740:intron | 45.0% | |
| GATACACATACCACCATAGG+TGG | + | chr7_3:36687175-36687194 | Msa1102740:intron | 45.0% | |
| TATGAGTGGTATGCCACCTA+TGG | - | chr7_3:36687191-36687210 | None:intergenic | 45.0% | |
| ! | GATTTAGGATGACGACGACA+GGG | - | chr7_3:36687492-36687511 | None:intergenic | 45.0% |
| ! | ACATGGATCTCGACGGATTT+AGG | - | chr7_3:36687507-36687526 | None:intergenic | 45.0% |
| GTTGTCACTCACTCACTCTA+AGG | + | chr7_3:36687597-36687616 | Msa1102740:intron | 45.0% | |
| GCTGCCATGAGATTTATCTG+CGG | + | chr7_3:36688057-36688076 | Msa1102740:intron | 45.0% | |
| CTGCCATGAGATTTATCTGC+GGG | + | chr7_3:36688058-36688077 | Msa1102740:intron | 45.0% | |
| TCTCCTTGTGGGTAATAAGC+TGG | + | chr7_3:36688528-36688547 | Msa1102740:intron | 45.0% | |
| ATGCCAGCTTATTACCCACA+AGG | - | chr7_3:36688534-36688553 | None:intergenic | 45.0% | |
| TTGCAGGTTCTTGGGAAACA+TGG | + | chr7_3:36688702-36688721 | Msa1102740:intron | 45.0% | |
| TGAAGTGAGATCCAACAGTC+AGG | - | chr7_3:36688761-36688780 | None:intergenic | 45.0% | |
| TGTTGGATCTCACTTCAGAG+AGG | + | chr7_3:36688764-36688783 | Msa1102740:CDS | 45.0% | |
| GAGAGGCAAACAACTTCCTA+TGG | + | chr7_3:36688781-36688800 | Msa1102740:CDS | 45.0% | |
| CTTTGAGCTTGAAAGGCCAT+AGG | - | chr7_3:36688800-36688819 | None:intergenic | 45.0% | |
| TTCTTCTTCATGCCACCCAA+AGG | - | chr7_3:36688825-36688844 | None:intergenic | 45.0% | |
| ! | TATGTTGAAGGTGGTGATGC+TGG | + | chr7_3:36688855-36688874 | Msa1102740:CDS | 45.0% |
| ACGATGCCTATTCATCAGAG+TGG | + | chr7_3:36687151-36687170 | Msa1102740:intron | 45.0% | |
| GGTGATACACATACCACCAT+AGG | + | chr7_3:36687172-36687191 | Msa1102740:intron | 45.0% | |
| GATACACATACCACCATAGG+TGG | + | chr7_3:36687175-36687194 | Msa1102740:intron | 45.0% | |
| TATGAGTGGTATGCCACCTA+TGG | - | chr7_3:36687191-36687210 | None:intergenic | 45.0% | |
| ! | GATTTAGGATGACGACGACA+GGG | - | chr7_3:36687492-36687511 | None:intergenic | 45.0% |
| ! | ACATGGATCTCGACGGATTT+AGG | - | chr7_3:36687507-36687526 | None:intergenic | 45.0% |
| GTTGTCACTCACTCACTCTA+AGG | + | chr7_3:36687597-36687616 | Msa1102740:intron | 45.0% | |
| GCTGCCATGAGATTTATCTG+CGG | + | chr7_3:36688057-36688076 | Msa1102740:intron | 45.0% | |
| CTGCCATGAGATTTATCTGC+GGG | + | chr7_3:36688058-36688077 | Msa1102740:intron | 45.0% | |
| TCTCCTTGTGGGTAATAAGC+TGG | + | chr7_3:36688528-36688547 | Msa1102740:intron | 45.0% | |
| ATGCCAGCTTATTACCCACA+AGG | - | chr7_3:36688534-36688553 | None:intergenic | 45.0% | |
| TTGCAGGTTCTTGGGAAACA+TGG | + | chr7_3:36688702-36688721 | Msa1102740:intron | 45.0% | |
| TGAAGTGAGATCCAACAGTC+AGG | - | chr7_3:36688761-36688780 | None:intergenic | 45.0% | |
| TGTTGGATCTCACTTCAGAG+AGG | + | chr7_3:36688764-36688783 | Msa1102740:CDS | 45.0% | |
| GAGAGGCAAACAACTTCCTA+TGG | + | chr7_3:36688781-36688800 | Msa1102740:CDS | 45.0% | |
| CTTTGAGCTTGAAAGGCCAT+AGG | - | chr7_3:36688800-36688819 | None:intergenic | 45.0% | |
| TTCTTCTTCATGCCACCCAA+AGG | - | chr7_3:36688825-36688844 | None:intergenic | 45.0% | |
| ! | TATGTTGAAGGTGGTGATGC+TGG | + | chr7_3:36688855-36688874 | Msa1102740:CDS | 45.0% |
| !!! | ATTTTATTAATAAAAAATTG+TGG | + | chr7_3:36687229-36687248 | Msa1102740:intron | 5.0% |
| !!! | TTTTATTAATAAAAAATTGT+GGG | + | chr7_3:36687230-36687249 | Msa1102740:intron | 5.0% |
| !!! | ATTTTATTAATAAAAAATTG+TGG | + | chr7_3:36687229-36687248 | Msa1102740:intron | 5.0% |
| !!! | TTTTATTAATAAAAAATTGT+GGG | + | chr7_3:36687230-36687249 | Msa1102740:intron | 5.0% |
| !! | TCTGAGGGCAATAACGGACA+CGG | - | chr7_3:36687420-36687439 | None:intergenic | 50.0% |
| GAGGTGGGGTTGAAATCTGA+GGG | - | chr7_3:36687435-36687454 | None:intergenic | 50.0% | |
| AGAGGTGGGGTTGAAATCTG+AGG | - | chr7_3:36687436-36687455 | None:intergenic | 50.0% | |
| ACAATGGTGGTTGTGGACGA+GGG | - | chr7_3:36687469-36687488 | None:intergenic | 50.0% | |
| ! | GGATTTAGGATGACGACGAC+AGG | - | chr7_3:36687493-36687512 | None:intergenic | 50.0% |
| GCACCCGCAGATAAATCTCA+TGG | - | chr7_3:36688064-36688083 | None:intergenic | 50.0% | |
| ATCCACGAGATCCTGACTGT+TGG | + | chr7_3:36688747-36688766 | Msa1102740:CDS | 50.0% | |
| ATCCAACAGTCAGGATCTCG+TGG | - | chr7_3:36688752-36688771 | None:intergenic | 50.0% | |
| AAGCTCAAAGCTCCTTTGGG+TGG | + | chr7_3:36688810-36688829 | Msa1102740:CDS | 50.0% | |
| ! | AAGGTGGTGATGCTGGTAAC+AGG | + | chr7_3:36688862-36688881 | Msa1102740:CDS | 50.0% |
| ! | AGGTGGTGATGCTGGTAACA+GGG | + | chr7_3:36688863-36688882 | Msa1102740:CDS | 50.0% |
| !! | TCTGAGGGCAATAACGGACA+CGG | - | chr7_3:36687420-36687439 | None:intergenic | 50.0% |
| GAGGTGGGGTTGAAATCTGA+GGG | - | chr7_3:36687435-36687454 | None:intergenic | 50.0% | |
| AGAGGTGGGGTTGAAATCTG+AGG | - | chr7_3:36687436-36687455 | None:intergenic | 50.0% | |
| ACAATGGTGGTTGTGGACGA+GGG | - | chr7_3:36687469-36687488 | None:intergenic | 50.0% | |
| ! | GGATTTAGGATGACGACGAC+AGG | - | chr7_3:36687493-36687512 | None:intergenic | 50.0% |
| GCACCCGCAGATAAATCTCA+TGG | - | chr7_3:36688064-36688083 | None:intergenic | 50.0% | |
| ATCCACGAGATCCTGACTGT+TGG | + | chr7_3:36688747-36688766 | Msa1102740:CDS | 50.0% | |
| ATCCAACAGTCAGGATCTCG+TGG | - | chr7_3:36688752-36688771 | None:intergenic | 50.0% | |
| AAGCTCAAAGCTCCTTTGGG+TGG | + | chr7_3:36688810-36688829 | Msa1102740:CDS | 50.0% | |
| ! | AAGGTGGTGATGCTGGTAAC+AGG | + | chr7_3:36688862-36688881 | Msa1102740:CDS | 50.0% |
| ! | AGGTGGTGATGCTGGTAACA+GGG | + | chr7_3:36688863-36688882 | Msa1102740:CDS | 50.0% |
| GAGTGGTATGCCACCTATGG+TGG | - | chr7_3:36687188-36687207 | None:intergenic | 55.0% | |
| ! | CACACAAGGGGGTGTATGAG+TGG | - | chr7_3:36687205-36687224 | None:intergenic | 55.0% |
| CACTCATACACCCCCTTGTG+TGG | + | chr7_3:36687203-36687222 | Msa1102740:intron | 55.0% | |
| GACGAGAGGAAAAGAGAGGG+TGG | - | chr7_3:36687321-36687340 | None:intergenic | 55.0% | |
| ! | GTGTTGACGGAAGTGGTAGC+CGG | - | chr7_3:36687368-36687387 | None:intergenic | 55.0% |
| !! | GGAAGTGGTGTTGACGGAAG+TGG | - | chr7_3:36687375-36687394 | None:intergenic | 55.0% |
| !! | GGTGACGGAAGTGGTGTTGA+CGG | - | chr7_3:36687381-36687400 | None:intergenic | 55.0% |
| !! | AATAACGGACACGGCGATGG+TGG | - | chr7_3:36687411-36687430 | None:intergenic | 55.0% |
| GACAATGGTGGTTGTGGACG+AGG | - | chr7_3:36687470-36687489 | None:intergenic | 55.0% | |
| GACAGGGACAATGGTGGTTG+TGG | - | chr7_3:36687476-36687495 | None:intergenic | 55.0% | |
| GATGACGACGACAGGGACAA+TGG | - | chr7_3:36687485-36687504 | None:intergenic | 55.0% | |
| !!! | TCTGCGGGTGCTGCTGATTT+TGG | + | chr7_3:36688073-36688092 | Msa1102740:intron | 55.0% |
| ! | TGGTGATGCTGGTAACAGGG+AGG | + | chr7_3:36688866-36688885 | Msa1102740:CDS | 55.0% |
| GAGTGGTATGCCACCTATGG+TGG | - | chr7_3:36687188-36687207 | None:intergenic | 55.0% | |
| ! | CACACAAGGGGGTGTATGAG+TGG | - | chr7_3:36687205-36687224 | None:intergenic | 55.0% |
| CACTCATACACCCCCTTGTG+TGG | + | chr7_3:36687203-36687222 | Msa1102740:intron | 55.0% | |
| GACGAGAGGAAAAGAGAGGG+TGG | - | chr7_3:36687321-36687340 | None:intergenic | 55.0% | |
| ! | GTGTTGACGGAAGTGGTAGC+CGG | - | chr7_3:36687368-36687387 | None:intergenic | 55.0% |
| !! | GGAAGTGGTGTTGACGGAAG+TGG | - | chr7_3:36687375-36687394 | None:intergenic | 55.0% |
| !! | GGTGACGGAAGTGGTGTTGA+CGG | - | chr7_3:36687381-36687400 | None:intergenic | 55.0% |
| !! | AATAACGGACACGGCGATGG+TGG | - | chr7_3:36687411-36687430 | None:intergenic | 55.0% |
| GACAATGGTGGTTGTGGACG+AGG | - | chr7_3:36687470-36687489 | None:intergenic | 55.0% | |
| GACAGGGACAATGGTGGTTG+TGG | - | chr7_3:36687476-36687495 | None:intergenic | 55.0% | |
| GATGACGACGACAGGGACAA+TGG | - | chr7_3:36687485-36687504 | None:intergenic | 55.0% | |
| !!! | TCTGCGGGTGCTGCTGATTT+TGG | + | chr7_3:36688073-36688092 | Msa1102740:intron | 55.0% |
| ! | TGGTGATGCTGGTAACAGGG+AGG | + | chr7_3:36688866-36688885 | Msa1102740:CDS | 55.0% |
| TTTCTCTGCCATGCCTCCGC+CGG | + | chr7_3:36687346-36687365 | Msa1102740:intron | 60.0% | |
| TTGACGGAAGTGGTAGCCGG+CGG | - | chr7_3:36687365-36687384 | None:intergenic | 60.0% | |
| !! | GGCAATAACGGACACGGCGA+TGG | - | chr7_3:36687414-36687433 | None:intergenic | 60.0% |
| AGGGAGCAAGCGACAGAGGT+GGG | - | chr7_3:36687450-36687469 | None:intergenic | 60.0% | |
| GACGACGACAGGGACAATGG+TGG | - | chr7_3:36687482-36687501 | None:intergenic | 60.0% | |
| TTTCTCTGCCATGCCTCCGC+CGG | + | chr7_3:36687346-36687365 | Msa1102740:intron | 60.0% | |
| TTGACGGAAGTGGTAGCCGG+CGG | - | chr7_3:36687365-36687384 | None:intergenic | 60.0% | |
| !! | GGCAATAACGGACACGGCGA+TGG | - | chr7_3:36687414-36687433 | None:intergenic | 60.0% |
| AGGGAGCAAGCGACAGAGGT+GGG | - | chr7_3:36687450-36687469 | None:intergenic | 60.0% | |
| GACGACGACAGGGACAATGG+TGG | - | chr7_3:36687482-36687501 | None:intergenic | 60.0% | |
| ! | AACGGACACGGCGATGGTGG+CGG | - | chr7_3:36687408-36687427 | None:intergenic | 65.0% |
| GGGAGCAAGCGACAGAGGTG+GGG | - | chr7_3:36687449-36687468 | None:intergenic | 65.0% | |
| GAGGGAGCAAGCGACAGAGG+TGG | - | chr7_3:36687451-36687470 | None:intergenic | 65.0% | |
| GACGAGGGAGCAAGCGACAG+AGG | - | chr7_3:36687454-36687473 | None:intergenic | 65.0% | |
| ! | AACGGACACGGCGATGGTGG+CGG | - | chr7_3:36687408-36687427 | None:intergenic | 65.0% |
| GGGAGCAAGCGACAGAGGTG+GGG | - | chr7_3:36687449-36687468 | None:intergenic | 65.0% | |
| GAGGGAGCAAGCGACAGAGG+TGG | - | chr7_3:36687451-36687470 | None:intergenic | 65.0% | |
| GACGAGGGAGCAAGCGACAG+AGG | - | chr7_3:36687454-36687473 | None:intergenic | 65.0% | |
| AGTGGTAGCCGGCGGAGGCA+TGG | - | chr7_3:36687357-36687376 | None:intergenic | 70.0% | |
| ACGGAAGTGGTAGCCGGCGG+AGG | - | chr7_3:36687362-36687381 | None:intergenic | 70.0% | |
| !! | GATGGTGGCGGTGGCGGTGA+CGG | - | chr7_3:36687396-36687415 | None:intergenic | 70.0% |
| AGTGGTAGCCGGCGGAGGCA+TGG | - | chr7_3:36687357-36687376 | None:intergenic | 70.0% | |
| ACGGAAGTGGTAGCCGGCGG+AGG | - | chr7_3:36687362-36687381 | None:intergenic | 70.0% | |
| !! | GATGGTGGCGGTGGCGGTGA+CGG | - | chr7_3:36687396-36687415 | None:intergenic | 70.0% |
| !! | GGCGGTGGCGGTGACGGAAG+TGG | - | chr7_3:36687390-36687409 | None:intergenic | 75.0% |
| !! | CACGGCGATGGTGGCGGTGG+CGG | - | chr7_3:36687402-36687421 | None:intergenic | 75.0% |
| !! | GGACACGGCGATGGTGGCGG+TGG | - | chr7_3:36687405-36687424 | None:intergenic | 75.0% |
| !! | GGCGGTGGCGGTGACGGAAG+TGG | - | chr7_3:36687390-36687409 | None:intergenic | 75.0% |
| !! | CACGGCGATGGTGGCGGTGG+CGG | - | chr7_3:36687402-36687421 | None:intergenic | 75.0% |
| !! | GGACACGGCGATGGTGGCGG+TGG | - | chr7_3:36687405-36687424 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 36687078 | 36689163 | 36687078 | ID=Msa1102740;Name=Msa1102740 |
| chr7_3 | mRNA | 36687078 | 36689163 | 36687078 | ID=Msa1102740-mRNA-1;Parent=Msa1102740;Name=Msa1102740-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0.5|0.5|0|0.5|2|240|74 |
| chr7_3 | exon | 36687078 | 36687086 | 36687078 | ID=Msa1102740-mRNA-1:exon:7594;Parent=Msa1102740-mRNA-1 |
| chr7_3 | exon | 36688708 | 36689163 | 36688708 | ID=Msa1102740-mRNA-1:exon:7595;Parent=Msa1102740-mRNA-1 |
| chr7_3 | CDS | 36687078 | 36687086 | 36687078 | ID=Msa1102740-mRNA-1:cds;Parent=Msa1102740-mRNA-1 |
| chr7_3 | CDS | 36688708 | 36688923 | 36688708 | ID=Msa1102740-mRNA-1:cds;Parent=Msa1102740-mRNA-1 |
| chr7_3 | three_prime_UTR | 36688924 | 36689163 | 36688924 | ID=Msa1102740-mRNA-1:three_prime_utr;Parent=Msa1102740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
