Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957110 | sp|Q9LHP1|RL74_ARATH | 87.143 | 70 | 9 | 0 | 4 | 73 | 175 | 244 | 2.05e-41 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957110 | I3T3R3 | 97.183 | 71 | 2 | 0 | 3 | 73 | 78 | 148 | 7.79e-43 | 145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa0957110 | 0.815761 | 7.834807e-52 | -8.615850e-47 |
| Msa0017510 | Msa0957110 | 0.831932 | 1.261152e-55 | -8.615850e-47 |
| Msa0031340 | Msa0957110 | 0.826958 | 2.038705e-54 | -8.615850e-47 |
| Msa0044020 | Msa0957110 | 0.824462 | 7.967728e-54 | -8.615850e-47 |
| Msa0045490 | Msa0957110 | 0.805889 | 1.073480e-49 | -8.615850e-47 |
| Msa0051790 | Msa0957110 | 0.804513 | 2.083676e-49 | -8.615850e-47 |
| Msa0054480 | Msa0957110 | 0.803883 | 2.818657e-49 | -8.615850e-47 |
| Msa0074240 | Msa0957110 | 0.819941 | 8.914507e-53 | -8.615850e-47 |
| Msa0078650 | Msa0957110 | 0.833047 | 6.673136e-56 | -8.615850e-47 |
| Msa0094850 | Msa0957110 | 0.808818 | 2.569642e-50 | -8.615850e-47 |
| Msa0109900 | Msa0957110 | 0.806545 | 7.808009e-50 | -8.615850e-47 |
| Msa0110970 | Msa0957110 | 0.803549 | 3.306184e-49 | -8.615850e-47 |
| Msa0112750 | Msa0957110 | 0.813140 | 2.976118e-51 | -8.615850e-47 |
| Msa0120040 | Msa0957110 | -0.825735 | 3.986544e-54 | -8.615850e-47 |
| Msa0612960 | Msa0957110 | 0.816524 | 5.289986e-52 | -8.615850e-47 |
| Msa0616160 | Msa0957110 | 0.803272 | 3.773413e-49 | -8.615850e-47 |
| Msa0625720 | Msa0957110 | 0.809194 | 2.134482e-50 | -8.615850e-47 |
| Msa0627450 | Msa0957110 | 0.825589 | 4.317856e-54 | -8.615850e-47 |
| Msa0631120 | Msa0957110 | 0.808031 | 3.780804e-50 | -8.615850e-47 |
| Msa0639430 | Msa0957110 | 0.805942 | 1.046148e-49 | -8.615850e-47 |
| Msa0657970 | Msa0957110 | 0.815248 | 1.018934e-51 | -8.615850e-47 |
| Msa0662500 | Msa0957110 | 0.818122 | 2.311605e-52 | -8.615850e-47 |
| Msa0663390 | Msa0957110 | 0.818042 | 2.409057e-52 | -8.615850e-47 |
| Msa0667050 | Msa0957110 | 0.806960 | 6.382506e-50 | -8.615850e-47 |
| Msa0681270 | Msa0957110 | 0.805354 | 1.390066e-49 | -8.615850e-47 |
| Msa0683510 | Msa0957110 | 0.814274 | 1.674667e-51 | -8.615850e-47 |
| Msa0692040 | Msa0957110 | -0.806483 | 8.047131e-50 | -8.615850e-47 |
| Msa0708520 | Msa0957110 | 0.829319 | 5.502773e-55 | -8.615850e-47 |
| Msa0711890 | Msa0957110 | 0.801993 | 6.925611e-49 | -8.615850e-47 |
| Msa0720820 | Msa0957110 | 0.817034 | 4.064862e-52 | -8.615850e-47 |
| Msa0740740 | Msa0957110 | 0.800867 | 1.178191e-48 | -8.615850e-47 |
| Msa0742380 | Msa0957110 | 0.809292 | 2.034104e-50 | -8.615850e-47 |
| Msa0749760 | Msa0957110 | 0.810449 | 1.146585e-50 | -8.615850e-47 |
| Msa0750170 | Msa0957110 | 0.807730 | 4.381707e-50 | -8.615850e-47 |
| Msa0750880 | Msa0957110 | 0.847963 | 8.289480e-60 | -8.615850e-47 |
| Msa0761940 | Msa0957110 | 0.802052 | 6.736472e-49 | -8.615850e-47 |
| Msa0762970 | Msa0957110 | 0.801279 | 9.707241e-49 | -8.615850e-47 |
| Msa0767300 | Msa0957110 | 0.810860 | 9.340458e-51 | -8.615850e-47 |
| Msa0794730 | Msa0957110 | 0.819948 | 8.880555e-53 | -8.615850e-47 |
| Msa0803890 | Msa0957110 | 0.819551 | 1.094256e-52 | -8.615850e-47 |
| Msa0828560 | Msa0957110 | 0.818576 | 1.824289e-52 | -8.615850e-47 |
| Msa0828850 | Msa0957110 | 0.812211 | 4.751001e-51 | -8.615850e-47 |
| Msa0832340 | Msa0957110 | 0.811876 | 5.623472e-51 | -8.615850e-47 |
| Msa0833220 | Msa0957110 | 0.801416 | 9.099856e-49 | -8.615850e-47 |
| Msa0841940 | Msa0957110 | 0.812770 | 3.587317e-51 | -8.615850e-47 |
| Msa0124060 | Msa0957110 | 0.820449 | 6.818722e-53 | -8.615850e-47 |
| Msa0126370 | Msa0957110 | 0.836084 | 1.151450e-56 | -8.615850e-47 |
| Msa0157290 | Msa0957110 | 0.831519 | 1.594005e-55 | -8.615850e-47 |
| Msa0168500 | Msa0957110 | 0.811883 | 5.601156e-51 | -8.615850e-47 |
| Msa0171290 | Msa0957110 | 0.829296 | 5.573155e-55 | -8.615850e-47 |
| Msa0197930 | Msa0957110 | 0.813216 | 2.863742e-51 | -8.615850e-47 |
| Msa0200260 | Msa0957110 | 0.806333 | 8.655429e-50 | -8.615850e-47 |
| Msa0211150 | Msa0957110 | 0.817253 | 3.629724e-52 | -8.615850e-47 |
| Msa0216240 | Msa0957110 | 0.812932 | 3.305449e-51 | -8.615850e-47 |
| Msa0220580 | Msa0957110 | 0.803368 | 3.604023e-49 | -8.615850e-47 |
| Msa0231650 | Msa0957110 | 0.801828 | 7.488717e-49 | -8.615850e-47 |
| Msa0366240 | Msa0957110 | 0.809931 | 1.482769e-50 | -8.615850e-47 |
| Msa0395820 | Msa0957110 | 0.801162 | 1.025535e-48 | -8.615850e-47 |
| Msa0410650 | Msa0957110 | 0.814460 | 1.523745e-51 | -8.615850e-47 |
| Msa0414170 | Msa0957110 | 0.808981 | 2.370760e-50 | -8.615850e-47 |
| Msa0417270 | Msa0957110 | 0.812102 | 5.018316e-51 | -8.615850e-47 |
| Msa0417880 | Msa0957110 | 0.821738 | 3.442327e-53 | -8.615850e-47 |
| Msa0425400 | Msa0957110 | 0.801246 | 9.855630e-49 | -8.615850e-47 |
| Msa0479170 | Msa0957110 | 0.808430 | 3.109566e-50 | -8.615850e-47 |
| Msa0481530 | Msa0957110 | 0.820650 | 6.130557e-53 | -8.615850e-47 |
| Msa0243100 | Msa0957110 | 0.816507 | 5.335536e-52 | -8.615850e-47 |
| Msa0261340 | Msa0957110 | 0.803767 | 2.978876e-49 | -8.615850e-47 |
| Msa0264150 | Msa0957110 | 0.810204 | 1.294941e-50 | -8.615850e-47 |
| Msa0270320 | Msa0957110 | 0.811970 | 5.362730e-51 | -8.615850e-47 |
| Msa0274360 | Msa0957110 | 0.802494 | 5.463594e-49 | -8.615850e-47 |
| Msa0287650 | Msa0957110 | 0.829220 | 5.816257e-55 | -8.615850e-47 |
| Msa0302170 | Msa0957110 | 0.800148 | 1.651280e-48 | -8.615850e-47 |
| Msa0305700 | Msa0957110 | 0.824332 | 8.550696e-54 | -8.615850e-47 |
| Msa0317280 | Msa0957110 | 0.803715 | 3.053486e-49 | -8.615850e-47 |
| Msa0334040 | Msa0957110 | 0.801956 | 7.048532e-49 | -8.615850e-47 |
| Msa0484780 | Msa0957110 | 0.815025 | 1.141828e-51 | -8.615850e-47 |
| Msa0484840 | Msa0957110 | 0.812611 | 3.886667e-51 | -8.615850e-47 |
| Msa0495320 | Msa0957110 | 0.817367 | 3.421978e-52 | -8.615850e-47 |
| Msa0498060 | Msa0957110 | 0.806853 | 6.723746e-50 | -8.615850e-47 |
| Msa0507680 | Msa0957110 | 0.811864 | 5.655522e-51 | -8.615850e-47 |
| Msa0523460 | Msa0957110 | 0.819017 | 1.448478e-52 | -8.615850e-47 |
| Msa0529890 | Msa0957110 | 0.810772 | 9.762566e-51 | -8.615850e-47 |
| Msa0534590 | Msa0957110 | 0.802311 | 5.959282e-49 | -8.615850e-47 |
| Msa0545070 | Msa0957110 | 0.801186 | 1.014135e-48 | -8.615850e-47 |
| Msa0546680 | Msa0957110 | 0.800475 | 1.416702e-48 | -8.615850e-47 |
| Msa0551890 | Msa0957110 | 0.801180 | 1.016957e-48 | -8.615850e-47 |
| Msa0557070 | Msa0957110 | 0.833583 | 4.906059e-56 | -8.615850e-47 |
| Msa0557320 | Msa0957110 | 0.814328 | 1.629485e-51 | -8.615850e-47 |
| Msa0569200 | Msa0957110 | 0.810048 | 1.399274e-50 | -8.615850e-47 |
| Msa0585560 | Msa0957110 | 0.814224 | 1.717941e-51 | -8.615850e-47 |
| Msa0861600 | Msa0957110 | 0.803186 | 3.931624e-49 | -8.615850e-47 |
| Msa0861870 | Msa0957110 | 0.806980 | 6.319244e-50 | -8.615850e-47 |
| Msa0869100 | Msa0957110 | 0.807778 | 4.279663e-50 | -8.615850e-47 |
| Msa0880140 | Msa0957110 | 0.830986 | 2.156371e-55 | -8.615850e-47 |
| Msa0898750 | Msa0957110 | 0.809694 | 1.667066e-50 | -8.615850e-47 |
| Msa0902760 | Msa0957110 | 0.801399 | 9.171984e-49 | -8.615850e-47 |
| Msa0933230 | Msa0957110 | 0.804490 | 2.107151e-49 | -8.615850e-47 |
| Msa0933310 | Msa0957110 | 0.807411 | 5.121961e-50 | -8.615850e-47 |
| Msa0957110 | Msa0966400 | 0.819434 | 1.163809e-52 | -8.615850e-47 |
| Msa0957110 | Msa0968590 | 0.826428 | 2.727653e-54 | -8.615850e-47 |
| Msa0957110 | Msa0969520 | 0.806424 | 8.281667e-50 | -8.615850e-47 |
| Msa0957110 | Msa0974070 | 0.835610 | 1.518017e-56 | -8.615850e-47 |
| Msa0957110 | Msa0975340 | 0.810437 | 1.153086e-50 | -8.615850e-47 |
| Msa0957110 | Msa1004550 | 0.815348 | 9.681065e-52 | -8.615850e-47 |
| Msa0957110 | Msa1004600 | 0.812683 | 3.747233e-51 | -8.615850e-47 |
| Msa0957110 | Msa1013400 | 0.810392 | 1.179542e-50 | -8.615850e-47 |
| Msa0957110 | Msa1019470 | 0.808420 | 3.125154e-50 | -8.615850e-47 |
| Msa0957110 | Msa1031930 | 0.806339 | 8.629729e-50 | -8.615850e-47 |
| Msa0957110 | Msa1040400 | 0.804723 | 1.883841e-49 | -8.615850e-47 |
| Msa0957110 | Msa1043390 | 0.817587 | 3.052466e-52 | -8.615850e-47 |
| Msa0957110 | Msa1043450 | 0.814389 | 1.579485e-51 | -8.615850e-47 |
| Msa0957110 | Msa1063950 | 0.811749 | 5.992045e-51 | -8.615850e-47 |
| Msa0957110 | Msa1082500 | 0.824305 | 8.673042e-54 | -8.615850e-47 |
| Msa0957110 | Msa1085200 | 0.813534 | 2.437532e-51 | -8.615850e-47 |
| Msa0957110 | Msa1093530 | 0.804817 | 1.800771e-49 | -8.615850e-47 |
| Msa0957110 | Msa1093840 | 0.830639 | 2.621867e-55 | -8.615850e-47 |
| Msa0957110 | Msa1102740 | 0.848811 | 4.831348e-60 | -8.615850e-47 |
| Msa0957110 | Msa1102770 | 0.832683 | 8.219090e-56 | -8.615850e-47 |
| Msa0957110 | Msa1108160 | 0.821110 | 4.804678e-53 | -8.615850e-47 |
| Msa0957110 | Msa1121440 | 0.808372 | 3.199398e-50 | -8.615850e-47 |
| Msa0957110 | Msa1123380 | 0.829834 | 4.123868e-55 | -8.615850e-47 |
| Msa0957110 | Msa1125760 | 0.806901 | 6.567089e-50 | -8.615850e-47 |
| Msa0957110 | Msa1125940 | 0.812609 | 3.889148e-51 | -8.615850e-47 |
| Msa0957110 | Msa1140690 | 0.810982 | 8.792097e-51 | -8.615850e-47 |
| Msa0957110 | Msa1147900 | 0.817613 | 3.011598e-52 | -8.615850e-47 |
| Msa0957110 | Msa1151910 | 0.803221 | 3.865700e-49 | -8.615850e-47 |
| Msa0957110 | Msa1165920 | 0.804110 | 2.528593e-49 | -8.615850e-47 |
| Msa0957110 | Msa1172450 | 0.811278 | 7.584909e-51 | -8.615850e-47 |
| Msa0957110 | Msa1172670 | 0.829208 | 5.855195e-55 | -8.615850e-47 |
| Msa0957110 | Msa1189070 | 0.810028 | 1.412767e-50 | -8.615850e-47 |
| Msa0957110 | Msa1193290 | 0.805464 | 1.318096e-49 | -8.615850e-47 |
| Msa0957110 | Msa1199570 | 0.820059 | 8.379393e-53 | -8.615850e-47 |
| Msa0957110 | Msa1199830 | -0.817950 | 2.527866e-52 | -8.615850e-47 |
| Msa0957110 | Msa1209460 | 0.815240 | 1.022969e-51 | -8.615850e-47 |
| Msa0957110 | Msa1214890 | 0.843514 | 1.337369e-58 | -8.615850e-47 |
| Msa0957110 | Msa1218600 | 0.811535 | 6.670340e-51 | -8.615850e-47 |
| Msa0957110 | Msa1221060 | 0.811036 | 8.558487e-51 | -8.615850e-47 |
| Msa0957110 | Msa1284550 | 0.808645 | 2.797820e-50 | -8.615850e-47 |
| Msa0957110 | Msa1303240 | 0.802193 | 6.301430e-49 | -8.615850e-47 |
| Msa0957110 | Msa1303250 | 0.835848 | 1.321485e-56 | -8.615850e-47 |
| Msa0957110 | Msa1324080 | 0.803878 | 2.824703e-49 | -8.615850e-47 |
| Msa0957110 | Msa1328710 | 0.828434 | 9.009222e-55 | -8.615850e-47 |
| Msa0957110 | Msa1331910 | 0.827177 | 1.806758e-54 | -8.615850e-47 |
| Msa0957110 | Msa1336710 | 0.808156 | 3.556377e-50 | -8.615850e-47 |
| Msa0957110 | Msa1342900 | 0.800166 | 1.637377e-48 | -8.615850e-47 |
| Msa0957110 | Msa1346370 | 0.805891 | 1.072591e-49 | -8.615850e-47 |
| Msa0957110 | Msa1353060 | 0.844986 | 5.379702e-59 | -8.615850e-47 |
| Msa0957110 | Msa1353980 | 0.809269 | 2.057143e-50 | -8.615850e-47 |
| Msa0957110 | Msa1359040 | 0.804110 | 2.527895e-49 | -8.615850e-47 |
| Msa0957110 | Msa1361410 | 0.812217 | 4.738535e-51 | -8.615850e-47 |
| Msa0957110 | Msa1371640 | 0.802372 | 5.788236e-49 | -8.615850e-47 |
| Msa0957110 | Msa1374550 | 0.816485 | 5.397278e-52 | -8.615850e-47 |
| Msa0957110 | Msa1375560 | 0.802861 | 4.589075e-49 | -8.615850e-47 |
| Msa0957110 | Msa1375840 | 0.806095 | 9.712847e-50 | -8.615850e-47 |
| Msa0957110 | Msa1392260 | 0.801197 | 1.008581e-48 | -8.615850e-47 |
| Msa0957110 | Msa1417200 | 0.812708 | 3.700629e-51 | -8.615850e-47 |
| Msa0957110 | Msa1429680 | 0.803196 | 3.912676e-49 | -8.615850e-47 |
| Msa0957110 | Msa1430240 | 0.802314 | 5.948744e-49 | -8.615850e-47 |
| Msa0957110 | Msa1451160 | 0.822368 | 2.458612e-53 | -8.615850e-47 |
| Msa0957110 | Msa1457910 | 0.800703 | 1.272746e-48 | -8.615850e-47 |
| Msa0957110 | Msa1460020 | 0.801488 | 8.796008e-49 | -8.615850e-47 |
| Msa0957110 | Msa1460390 | 0.803727 | 3.035971e-49 | -8.615850e-47 |
| Msa0957110 | Msa1466540 | 0.806834 | 6.785510e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957110 | MtrunA17_Chr1g0155331 | 97.183 | 71 | 2 | 0 | 3 | 73 | 174 | 244 | 2.20e-46 | 147 |
| Msa0957110 | MtrunA17_Chr2g0298841 | 97.183 | 71 | 2 | 0 | 3 | 73 | 174 | 244 | 3.33e-46 | 147 |
| Msa0957110 | MtrunA17_Chr4g0002321 | 90.000 | 70 | 7 | 0 | 4 | 73 | 174 | 243 | 7.90e-43 | 138 |
| Msa0957110 | MtrunA17_Chr1g0155311 | 93.548 | 62 | 4 | 0 | 2 | 63 | 1 | 62 | 1.40e-37 | 119 |
| Msa0957110 | MtrunA17_Chr7g0237701 | 54.286 | 70 | 32 | 0 | 4 | 73 | 177 | 246 | 2.66e-23 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957110 | AT3G13580.5 | 87.143 | 70 | 9 | 0 | 4 | 73 | 175 | 244 | 2.08e-42 | 137 |
| Msa0957110 | AT3G13580.4 | 87.143 | 70 | 9 | 0 | 4 | 73 | 175 | 244 | 2.08e-42 | 137 |
| Msa0957110 | AT3G13580.2 | 87.143 | 70 | 9 | 0 | 4 | 73 | 175 | 244 | 2.08e-42 | 137 |
| Msa0957110 | AT3G13580.3 | 87.143 | 70 | 9 | 0 | 4 | 73 | 175 | 244 | 2.08e-42 | 137 |
| Msa0957110 | AT3G13580.1 | 87.143 | 70 | 9 | 0 | 4 | 73 | 175 | 244 | 2.08e-42 | 137 |
| Msa0957110 | AT3G13580.7 | 87.143 | 70 | 9 | 0 | 4 | 73 | 175 | 244 | 2.08e-42 | 137 |
| Msa0957110 | AT3G13580.8 | 87.143 | 70 | 9 | 0 | 4 | 73 | 175 | 244 | 2.08e-42 | 137 |
| Msa0957110 | AT3G13580.6 | 87.143 | 70 | 9 | 0 | 4 | 73 | 175 | 244 | 2.08e-42 | 137 |
| Msa0957110 | AT3G13580.9 | 87.143 | 70 | 9 | 0 | 4 | 73 | 175 | 244 | 2.08e-42 | 137 |
| Msa0957110 | AT2G44120.1 | 84.507 | 71 | 11 | 0 | 3 | 73 | 172 | 242 | 6.10e-42 | 136 |
| Msa0957110 | AT2G01250.1 | 87.324 | 71 | 9 | 0 | 3 | 73 | 172 | 242 | 6.16e-42 | 136 |
| Msa0957110 | AT2G44120.2 | 84.507 | 71 | 11 | 0 | 3 | 73 | 177 | 247 | 7.41e-42 | 136 |
| Msa0957110 | AT1G80750.1 | 52.778 | 72 | 33 | 1 | 3 | 73 | 176 | 247 | 6.44e-18 | 74.7 |
Find 28 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCATTAGAAGGATGAATT+AGG | 0.270598 | 6_3:-66902092 | Msa0957110:exon |
| GTGTCGTTTAAGATTGATTA+TGG | 0.274625 | 6_3:-66902060 | Msa0957110:three_prime_UTR |
| TAGAAGGATGAATTAGGTTT+TGG | 0.280297 | 6_3:-66902086 | Msa0957110:exon |
| TTTCAAGCTCAAAGCTCCTT+TGG | 0.284641 | 6_3:-66902188 | Msa0957110:CDS |
| AGTGTTCAATTGCAGGTTCT+TGG | 0.317764 | 6_3:-66902301 | Msa0957110:intron |
| TTCAAGCTCAAAGCTCCTTT+GGG | 0.329811 | 6_3:-66902187 | Msa0957110:CDS |
| AAAACTTTCCCTGCACTTGC+AGG | 0.346062 | 6_3:+66901939 | None:intergenic |
| AAGGTGGTGATGCTGGTAAC+AGG | 0.401808 | 6_3:-66902132 | Msa0957110:CDS |
| GTGTTCAATTGCAGGTTCTT+GGG | 0.403327 | 6_3:-66902300 | Msa0957110:intron |
| AGTTCATTGCCTGCAAGTGC+AGG | 0.430035 | 6_3:-66901948 | Msa0957110:three_prime_UTR |
| ACATCAATGAACTCATTAGA+AGG | 0.462677 | 6_3:-66902102 | Msa0957110:CDS |
| AAAGGAGCTTTGAGCTTGAA+AGG | 0.504831 | 6_3:+66902190 | None:intergenic |
| GAGAGGCAAACAACTTCCTA+TGG | 0.504947 | 6_3:-66902213 | Msa0957110:CDS |
| AAGAGAAATCACGATGTTGA+AGG | 0.520632 | 6_3:-66902151 | Msa0957110:CDS |
| TGAAGTGAGATCCAACAGTC+AGG | 0.533373 | 6_3:+66902236 | None:intergenic |
| ATCCACGAGATCCTGACTGT+TGG | 0.544264 | 6_3:-66902247 | Msa0957110:CDS |
| TTGCAGGTTCTTGGGAAACA+TGG | 0.547799 | 6_3:-66902292 | Msa0957110:intron |
| GATGTTGAAGGTGGTGATGC+TGG | 0.550790 | 6_3:-66902139 | Msa0957110:CDS |
| TTCTTCTTCATGCCACCCAA+AGG | 0.554983 | 6_3:+66902172 | None:intergenic |
| CTTTGAGCTTGAAAGGCCAT+AGG | 0.568033 | 6_3:+66902197 | None:intergenic |
| AAGCTCAAAGCTCCTTTGGG+TGG | 0.570830 | 6_3:-66902184 | Msa0957110:CDS |
| GTTCATTGCCTGCAAGTGCA+GGG | 0.572849 | 6_3:-66901947 | Msa0957110:three_prime_UTR |
| ATCCAACAGTCAGGATCTCG+TGG | 0.575620 | 6_3:+66902245 | None:intergenic |
| AGAAATCACGATGTTGAAGG+TGG | 0.635665 | 6_3:-66902148 | Msa0957110:CDS |
| AGGTGGTGATGCTGGTAACA+GGG | 0.651466 | 6_3:-66902131 | Msa0957110:CDS |
| AGAGTTCAATTATACGAACA+TGG | 0.670583 | 6_3:+66903468 | None:intergenic |
| TGTTGGATCTCACTTCAGAG+AGG | 0.724978 | 6_3:-66902230 | Msa0957110:CDS |
| TGGTGATGCTGGTAACAGGG+AGG | 0.745630 | 6_3:-66902128 | Msa0957110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAATATTCAAATTAAAA+AGG | + | chr6_3:66902271-66902290 | None:intergenic | 10.0% |
| !! | TATATTATATGAAAAGTAAA+TGG | + | chr6_3:66902443-66902462 | None:intergenic | 10.0% |
| !! | TAAGAATATTCAAATTAAAA+AGG | + | chr6_3:66902271-66902290 | None:intergenic | 10.0% |
| !! | TATATTATATGAAAAGTAAA+TGG | + | chr6_3:66902443-66902462 | None:intergenic | 10.0% |
| !! | GAAAAATAGAAAAATTTAAC+CGG | + | chr6_3:66902989-66903008 | None:intergenic | 15.0% |
| !!! | AAAATCTTTAAAAACAAAAC+TGG | + | chr6_3:66903312-66903331 | None:intergenic | 15.0% |
| !! | GAAAAATAGAAAAATTTAAC+CGG | + | chr6_3:66902989-66903008 | None:intergenic | 15.0% |
| !!! | AAAATCTTTAAAAACAAAAC+TGG | + | chr6_3:66903312-66903331 | None:intergenic | 15.0% |
| !!! | TGATGTTTGTTAATGAAAAT+TGG | - | chr6_3:66902085-66902104 | Msa0957110:exon | 20.0% |
| !!! | TTGTGTAGAGAATTTTTTAT+TGG | - | chr6_3:66902202-66902221 | Msa0957110:CDS | 20.0% |
| !!! | GAATTTTTTATTGGCTAATT+TGG | - | chr6_3:66902211-66902230 | Msa0957110:CDS | 20.0% |
| !! | ATTTGAATATTCTTATGTTC+TGG | - | chr6_3:66902276-66902295 | Msa0957110:CDS | 20.0% |
| !! | TTCAAAATCAATAACTTCAA+AGG | + | chr6_3:66902311-66902330 | None:intergenic | 20.0% |
| !!! | TGATGTTTGTTAATGAAAAT+TGG | - | chr6_3:66902085-66902104 | Msa0957110:exon | 20.0% |
| !!! | TTGTGTAGAGAATTTTTTAT+TGG | - | chr6_3:66902202-66902221 | Msa0957110:CDS | 20.0% |
| !!! | GAATTTTTTATTGGCTAATT+TGG | - | chr6_3:66902211-66902230 | Msa0957110:CDS | 20.0% |
| !! | ATTTGAATATTCTTATGTTC+TGG | - | chr6_3:66902276-66902295 | Msa0957110:CDS | 20.0% |
| !! | TTCAAAATCAATAACTTCAA+AGG | + | chr6_3:66902311-66902330 | None:intergenic | 20.0% |
| !!! | TTCTCCAATTGTTTGTTTTA+GGG | - | chr6_3:66901963-66901982 | Msa0957110:three_prime_UTR | 25.0% |
| ! | AAAACCCTAAAACAAACAAT+TGG | + | chr6_3:66901970-66901989 | None:intergenic | 25.0% |
| !!! | TTGTTTTAGGGTTTTAGAAT+TGG | - | chr6_3:66901975-66901994 | Msa0957110:three_prime_UTR | 25.0% |
| !!! | TGTTTTAGGGTTTTAGAATT+GGG | - | chr6_3:66901976-66901995 | Msa0957110:three_prime_UTR | 25.0% |
| ! | TTAGAATTGGGAATTGTTAA+CGG | - | chr6_3:66901988-66902007 | Msa0957110:three_prime_UTR | 25.0% |
| ! | TGCTTATTATTGTTCAGAAT+TGG | - | chr6_3:66902034-66902053 | Msa0957110:three_prime_UTR | 25.0% |
| ! | GCTTATTATTGTTCAGAATT+GGG | - | chr6_3:66902035-66902054 | Msa0957110:three_prime_UTR | 25.0% |
| !! | AATTGGCTATTGTTTGAAAT+TGG | - | chr6_3:66902102-66902121 | Msa0957110:CDS | 25.0% |
| !! | AATTGGTAATTGTTCAGATT+TGG | - | chr6_3:66902119-66902138 | Msa0957110:CDS | 25.0% |
| !! | ATTGGTAATTGTTCAGATTT+GGG | - | chr6_3:66902120-66902139 | Msa0957110:CDS | 25.0% |
| !!! | TTTTTTATTGGCTAATTTGG+TGG | - | chr6_3:66902214-66902233 | Msa0957110:CDS | 25.0% |
| !!! | TTTGAAAATTCTAGTCTTGA+TGG | - | chr6_3:66902325-66902344 | Msa0957110:intron | 25.0% |
| ! | TGCTCAACAATATTTAAACA+GGG | + | chr6_3:66902473-66902492 | None:intergenic | 25.0% |
| ! | TGATGTATAATTGACACATT+CGG | + | chr6_3:66902656-66902675 | None:intergenic | 25.0% |
| ! | TGTGTCAATTATACATCATT+TGG | - | chr6_3:66902658-66902677 | Msa0957110:intron | 25.0% |
| ! | CAATTATACATCATTTGGAT+TGG | - | chr6_3:66902663-66902682 | Msa0957110:intron | 25.0% |
| ! | AAAATAGAGAACAAAGTACA+AGG | + | chr6_3:66902817-66902836 | None:intergenic | 25.0% |
| !!! | TTCTCCAATTGTTTGTTTTA+GGG | - | chr6_3:66901963-66901982 | Msa0957110:three_prime_UTR | 25.0% |
| ! | AAAACCCTAAAACAAACAAT+TGG | + | chr6_3:66901970-66901989 | None:intergenic | 25.0% |
| !!! | TTGTTTTAGGGTTTTAGAAT+TGG | - | chr6_3:66901975-66901994 | Msa0957110:three_prime_UTR | 25.0% |
| !!! | TGTTTTAGGGTTTTAGAATT+GGG | - | chr6_3:66901976-66901995 | Msa0957110:three_prime_UTR | 25.0% |
| ! | TTAGAATTGGGAATTGTTAA+CGG | - | chr6_3:66901988-66902007 | Msa0957110:three_prime_UTR | 25.0% |
| ! | TGCTTATTATTGTTCAGAAT+TGG | - | chr6_3:66902034-66902053 | Msa0957110:three_prime_UTR | 25.0% |
| ! | GCTTATTATTGTTCAGAATT+GGG | - | chr6_3:66902035-66902054 | Msa0957110:three_prime_UTR | 25.0% |
| !! | AATTGGCTATTGTTTGAAAT+TGG | - | chr6_3:66902102-66902121 | Msa0957110:CDS | 25.0% |
| !! | AATTGGTAATTGTTCAGATT+TGG | - | chr6_3:66902119-66902138 | Msa0957110:CDS | 25.0% |
| !! | ATTGGTAATTGTTCAGATTT+GGG | - | chr6_3:66902120-66902139 | Msa0957110:CDS | 25.0% |
| !!! | TTTTTTATTGGCTAATTTGG+TGG | - | chr6_3:66902214-66902233 | Msa0957110:CDS | 25.0% |
| !!! | TTTGAAAATTCTAGTCTTGA+TGG | - | chr6_3:66902325-66902344 | Msa0957110:intron | 25.0% |
| ! | TGCTCAACAATATTTAAACA+GGG | + | chr6_3:66902473-66902492 | None:intergenic | 25.0% |
| ! | TGATGTATAATTGACACATT+CGG | + | chr6_3:66902656-66902675 | None:intergenic | 25.0% |
| ! | TGTGTCAATTATACATCATT+TGG | - | chr6_3:66902658-66902677 | Msa0957110:intron | 25.0% |
| ! | CAATTATACATCATTTGGAT+TGG | - | chr6_3:66902663-66902682 | Msa0957110:intron | 25.0% |
| ! | AAAATAGAGAACAAAGTACA+AGG | + | chr6_3:66902817-66902836 | None:intergenic | 25.0% |
| AGAGAAATTGGAGAATTGAT+AGG | + | chr6_3:66901939-66901958 | None:intergenic | 30.0% | |
| CTAAAACAAACAATTGGAGA+AGG | + | chr6_3:66901964-66901983 | None:intergenic | 30.0% | |
| !! | CTTCTCCAATTGTTTGTTTT+AGG | - | chr6_3:66901962-66901981 | Msa0957110:three_prime_UTR | 30.0% |
| TAGAATTGGGAATTGTTAAC+GGG | - | chr6_3:66901989-66902008 | Msa0957110:three_prime_UTR | 30.0% | |
| TCAGAATTGGGAATTGTTAA+TGG | - | chr6_3:66902047-66902066 | Msa0957110:three_prime_UTR | 30.0% | |
| CAGAATTGGGAATTGTTAAT+GGG | - | chr6_3:66902048-66902067 | Msa0957110:three_prime_UTR | 30.0% | |
| TCAGATTTGGGAATTGTTAA+TGG | - | chr6_3:66902132-66902151 | Msa0957110:CDS | 30.0% | |
| CAGATTTGGGAATTGTTAAT+GGG | - | chr6_3:66902133-66902152 | Msa0957110:CDS | 30.0% | |
| GTGCTCAACAATATTTAAAC+AGG | + | chr6_3:66902474-66902493 | None:intergenic | 30.0% | |
| TCCATTCTCATATTCATTAG+TGG | - | chr6_3:66902582-66902601 | Msa0957110:intron | 30.0% | |
| ! | TCTATTTTCATTCTCCTAGT+GGG | - | chr6_3:66902829-66902848 | Msa0957110:intron | 30.0% |
| AAGCATGATACTAAAGCATA+TGG | + | chr6_3:66902907-66902926 | None:intergenic | 30.0% | |
| ACATCAATGAACTCATTAGA+AGG | - | chr6_3:66903217-66903236 | Msa0957110:intron | 30.0% | |
| ACTCATTAGAAGGATGAATT+AGG | - | chr6_3:66903227-66903246 | Msa0957110:intron | 30.0% | |
| ! | TAGAAGGATGAATTAGGTTT+TGG | - | chr6_3:66903233-66903252 | Msa0957110:intron | 30.0% |
| !! | GTGTCGTTTAAGATTGATTA+TGG | - | chr6_3:66903259-66903278 | Msa0957110:intron | 30.0% |
| AGAGAAATTGGAGAATTGAT+AGG | + | chr6_3:66901939-66901958 | None:intergenic | 30.0% | |
| CTAAAACAAACAATTGGAGA+AGG | + | chr6_3:66901964-66901983 | None:intergenic | 30.0% | |
| !! | CTTCTCCAATTGTTTGTTTT+AGG | - | chr6_3:66901962-66901981 | Msa0957110:three_prime_UTR | 30.0% |
| TAGAATTGGGAATTGTTAAC+GGG | - | chr6_3:66901989-66902008 | Msa0957110:three_prime_UTR | 30.0% | |
| TCAGAATTGGGAATTGTTAA+TGG | - | chr6_3:66902047-66902066 | Msa0957110:three_prime_UTR | 30.0% | |
| CAGAATTGGGAATTGTTAAT+GGG | - | chr6_3:66902048-66902067 | Msa0957110:three_prime_UTR | 30.0% | |
| TCAGATTTGGGAATTGTTAA+TGG | - | chr6_3:66902132-66902151 | Msa0957110:CDS | 30.0% | |
| CAGATTTGGGAATTGTTAAT+GGG | - | chr6_3:66902133-66902152 | Msa0957110:CDS | 30.0% | |
| GTGCTCAACAATATTTAAAC+AGG | + | chr6_3:66902474-66902493 | None:intergenic | 30.0% | |
| TCCATTCTCATATTCATTAG+TGG | - | chr6_3:66902582-66902601 | Msa0957110:intron | 30.0% | |
| ! | TCTATTTTCATTCTCCTAGT+GGG | - | chr6_3:66902829-66902848 | Msa0957110:intron | 30.0% |
| AAGCATGATACTAAAGCATA+TGG | + | chr6_3:66902907-66902926 | None:intergenic | 30.0% | |
| ACATCAATGAACTCATTAGA+AGG | - | chr6_3:66903217-66903236 | Msa0957110:intron | 30.0% | |
| ACTCATTAGAAGGATGAATT+AGG | - | chr6_3:66903227-66903246 | Msa0957110:intron | 30.0% | |
| ! | TAGAAGGATGAATTAGGTTT+TGG | - | chr6_3:66903233-66903252 | Msa0957110:intron | 30.0% |
| !! | GTGTCGTTTAAGATTGATTA+TGG | - | chr6_3:66903259-66903278 | Msa0957110:intron | 30.0% |
| TTGGAGAAGGAAAGAGAAAT+TGG | + | chr6_3:66901951-66901970 | None:intergenic | 35.0% | |
| ! | ATGTGTTTTGCTGCTGATAA+TGG | + | chr6_3:66902549-66902568 | None:intergenic | 35.0% |
| GCCACTAATGAATATGAGAA+TGG | + | chr6_3:66902586-66902605 | None:intergenic | 35.0% | |
| CGGCAATAACAGATTAGTAT+AGG | + | chr6_3:66902636-66902655 | None:intergenic | 35.0% | |
| CGATTGTACTGTGTATTTGT+TGG | - | chr6_3:66902702-66902721 | Msa0957110:intron | 35.0% | |
| ! | TACTGTGTATTTGTTGGTTG+CGG | - | chr6_3:66902708-66902727 | Msa0957110:intron | 35.0% |
| CCAACTCTTCAATTTCATCT+AGG | + | chr6_3:66902741-66902760 | None:intergenic | 35.0% | |
| CCTAGATGAAATTGAAGAGT+TGG | - | chr6_3:66902738-66902757 | Msa0957110:intron | 35.0% | |
| TTCAGAAACTCCAAATCTGA+AGG | - | chr6_3:66902781-66902800 | Msa0957110:intron | 35.0% | |
| TAGAAGAACACCTTCAGATT+TGG | + | chr6_3:66902794-66902813 | None:intergenic | 35.0% | |
| ! | CTCTATTTTCATTCTCCTAG+TGG | - | chr6_3:66902828-66902847 | Msa0957110:intron | 35.0% |
| TGGCATGTCATCTGATAATA+TGG | - | chr6_3:66902860-66902879 | Msa0957110:intron | 35.0% | |
| GGCATGTCATCTGATAATAT+GGG | - | chr6_3:66902861-66902880 | Msa0957110:intron | 35.0% | |
| GCATGTCATCTGATAATATG+GGG | - | chr6_3:66902862-66902881 | Msa0957110:intron | 35.0% | |
| CATGATACTAAAGCATATGG+AGG | + | chr6_3:66902904-66902923 | None:intergenic | 35.0% | |
| AGTATCATGCTTTCGTAACT+TGG | - | chr6_3:66902928-66902947 | Msa0957110:intron | 35.0% | |
| AAGAGAAATCACGATGTTGA+AGG | - | chr6_3:66903168-66903187 | Msa0957110:intron | 35.0% | |
| TTGGAGAAGGAAAGAGAAAT+TGG | + | chr6_3:66901951-66901970 | None:intergenic | 35.0% | |
| ! | ATGTGTTTTGCTGCTGATAA+TGG | + | chr6_3:66902549-66902568 | None:intergenic | 35.0% |
| GCCACTAATGAATATGAGAA+TGG | + | chr6_3:66902586-66902605 | None:intergenic | 35.0% | |
| CGGCAATAACAGATTAGTAT+AGG | + | chr6_3:66902636-66902655 | None:intergenic | 35.0% | |
| CGATTGTACTGTGTATTTGT+TGG | - | chr6_3:66902702-66902721 | Msa0957110:intron | 35.0% | |
| ! | TACTGTGTATTTGTTGGTTG+CGG | - | chr6_3:66902708-66902727 | Msa0957110:intron | 35.0% |
| CCAACTCTTCAATTTCATCT+AGG | + | chr6_3:66902741-66902760 | None:intergenic | 35.0% | |
| CCTAGATGAAATTGAAGAGT+TGG | - | chr6_3:66902738-66902757 | Msa0957110:intron | 35.0% | |
| TTCAGAAACTCCAAATCTGA+AGG | - | chr6_3:66902781-66902800 | Msa0957110:intron | 35.0% | |
| TAGAAGAACACCTTCAGATT+TGG | + | chr6_3:66902794-66902813 | None:intergenic | 35.0% | |
| ! | CTCTATTTTCATTCTCCTAG+TGG | - | chr6_3:66902828-66902847 | Msa0957110:intron | 35.0% |
| TGGCATGTCATCTGATAATA+TGG | - | chr6_3:66902860-66902879 | Msa0957110:intron | 35.0% | |
| GGCATGTCATCTGATAATAT+GGG | - | chr6_3:66902861-66902880 | Msa0957110:intron | 35.0% | |
| GCATGTCATCTGATAATATG+GGG | - | chr6_3:66902862-66902881 | Msa0957110:intron | 35.0% | |
| CATGATACTAAAGCATATGG+AGG | + | chr6_3:66902904-66902923 | None:intergenic | 35.0% | |
| AGTATCATGCTTTCGTAACT+TGG | - | chr6_3:66902928-66902947 | Msa0957110:intron | 35.0% | |
| AAGAGAAATCACGATGTTGA+AGG | - | chr6_3:66903168-66903187 | Msa0957110:intron | 35.0% | |
| !! | TTGGGAATTGTTAACGGGTT+AGG | - | chr6_3:66901994-66902013 | Msa0957110:three_prime_UTR | 40.0% |
| CATGCTTACTACTATGTTGC+CGG | - | chr6_3:66902967-66902986 | Msa0957110:intron | 40.0% | |
| CTGACATAGTGTTCAATTGC+AGG | - | chr6_3:66903011-66903030 | Msa0957110:intron | 40.0% | |
| AGTGTTCAATTGCAGGTTCT+TGG | - | chr6_3:66903018-66903037 | Msa0957110:intron | 40.0% | |
| GTGTTCAATTGCAGGTTCTT+GGG | - | chr6_3:66903019-66903038 | Msa0957110:intron | 40.0% | |
| !! | AAAGGAGCTTTGAGCTTGAA+AGG | + | chr6_3:66903132-66903151 | None:intergenic | 40.0% |
| TTTCAAGCTCAAAGCTCCTT+TGG | - | chr6_3:66903131-66903150 | Msa0957110:intron | 40.0% | |
| TTCAAGCTCAAAGCTCCTTT+GGG | - | chr6_3:66903132-66903151 | Msa0957110:intron | 40.0% | |
| AGAAATCACGATGTTGAAGG+TGG | - | chr6_3:66903171-66903190 | Msa0957110:intron | 40.0% | |
| !! | TTGGGAATTGTTAACGGGTT+AGG | - | chr6_3:66901994-66902013 | Msa0957110:three_prime_UTR | 40.0% |
| CATGCTTACTACTATGTTGC+CGG | - | chr6_3:66902967-66902986 | Msa0957110:intron | 40.0% | |
| CTGACATAGTGTTCAATTGC+AGG | - | chr6_3:66903011-66903030 | Msa0957110:intron | 40.0% | |
| AGTGTTCAATTGCAGGTTCT+TGG | - | chr6_3:66903018-66903037 | Msa0957110:intron | 40.0% | |
| GTGTTCAATTGCAGGTTCTT+GGG | - | chr6_3:66903019-66903038 | Msa0957110:intron | 40.0% | |
| !! | AAAGGAGCTTTGAGCTTGAA+AGG | + | chr6_3:66903132-66903151 | None:intergenic | 40.0% |
| TTTCAAGCTCAAAGCTCCTT+TGG | - | chr6_3:66903131-66903150 | Msa0957110:intron | 40.0% | |
| TTCAAGCTCAAAGCTCCTTT+GGG | - | chr6_3:66903132-66903151 | Msa0957110:intron | 40.0% | |
| AGAAATCACGATGTTGAAGG+TGG | - | chr6_3:66903171-66903190 | Msa0957110:intron | 40.0% | |
| GTTGTCACTCACTCACTCTA+AGG | - | chr6_3:66901909-66901928 | Msa0957110:three_prime_UTR | 45.0% | |
| GCTGCCATGAGATTTATCTG+CGG | - | chr6_3:66902369-66902388 | Msa0957110:intron | 45.0% | |
| CTGCCATGAGATTTATCTGC+GGG | - | chr6_3:66902370-66902389 | Msa0957110:intron | 45.0% | |
| ! | TCTCCTAGTGGGTAATAAGC+TGG | - | chr6_3:66902840-66902859 | Msa0957110:intron | 45.0% |
| ATGCCAGCTTATTACCCACT+AGG | + | chr6_3:66902846-66902865 | None:intergenic | 45.0% | |
| TTGCAGGTTCTTGGGAAACA+TGG | - | chr6_3:66903027-66903046 | Msa0957110:intron | 45.0% | |
| TGAAGTGAGATCCAACAGTC+AGG | + | chr6_3:66903086-66903105 | None:intergenic | 45.0% | |
| TGTTGGATCTCACTTCAGAG+AGG | - | chr6_3:66903089-66903108 | Msa0957110:intron | 45.0% | |
| GAGAGGCAAACAACTTCCTA+TGG | - | chr6_3:66903106-66903125 | Msa0957110:intron | 45.0% | |
| CTTTGAGCTTGAAAGGCCAT+AGG | + | chr6_3:66903125-66903144 | None:intergenic | 45.0% | |
| TTCTTCTTCATGCCACCCAA+AGG | + | chr6_3:66903150-66903169 | None:intergenic | 45.0% | |
| AAAACTTTCCCTGCACTTGC+AGG | + | chr6_3:66903383-66903402 | None:intergenic | 45.0% | |
| GTTGTCACTCACTCACTCTA+AGG | - | chr6_3:66901909-66901928 | Msa0957110:three_prime_UTR | 45.0% | |
| GCTGCCATGAGATTTATCTG+CGG | - | chr6_3:66902369-66902388 | Msa0957110:intron | 45.0% | |
| CTGCCATGAGATTTATCTGC+GGG | - | chr6_3:66902370-66902389 | Msa0957110:intron | 45.0% | |
| ! | TCTCCTAGTGGGTAATAAGC+TGG | - | chr6_3:66902840-66902859 | Msa0957110:intron | 45.0% |
| ATGCCAGCTTATTACCCACT+AGG | + | chr6_3:66902846-66902865 | None:intergenic | 45.0% | |
| TTGCAGGTTCTTGGGAAACA+TGG | - | chr6_3:66903027-66903046 | Msa0957110:intron | 45.0% | |
| TGAAGTGAGATCCAACAGTC+AGG | + | chr6_3:66903086-66903105 | None:intergenic | 45.0% | |
| TGTTGGATCTCACTTCAGAG+AGG | - | chr6_3:66903089-66903108 | Msa0957110:intron | 45.0% | |
| GAGAGGCAAACAACTTCCTA+TGG | - | chr6_3:66903106-66903125 | Msa0957110:intron | 45.0% | |
| CTTTGAGCTTGAAAGGCCAT+AGG | + | chr6_3:66903125-66903144 | None:intergenic | 45.0% | |
| TTCTTCTTCATGCCACCCAA+AGG | + | chr6_3:66903150-66903169 | None:intergenic | 45.0% | |
| AAAACTTTCCCTGCACTTGC+AGG | + | chr6_3:66903383-66903402 | None:intergenic | 45.0% | |
| GCACCCGCAGATAAATCTCA+TGG | + | chr6_3:66902376-66902395 | None:intergenic | 50.0% | |
| ATCCACGAGATCCTGACTGT+TGG | - | chr6_3:66903072-66903091 | Msa0957110:intron | 50.0% | |
| ATCCAACAGTCAGGATCTCG+TGG | + | chr6_3:66903077-66903096 | None:intergenic | 50.0% | |
| AAGCTCAAAGCTCCTTTGGG+TGG | - | chr6_3:66903135-66903154 | Msa0957110:intron | 50.0% | |
| ! | GATGTTGAAGGTGGTGATGC+TGG | - | chr6_3:66903180-66903199 | Msa0957110:intron | 50.0% |
| ! | AAGGTGGTGATGCTGGTAAC+AGG | - | chr6_3:66903187-66903206 | Msa0957110:intron | 50.0% |
| ! | AGGTGGTGATGCTGGTAACA+GGG | - | chr6_3:66903188-66903207 | Msa0957110:intron | 50.0% |
| AGTTCATTGCCTGCAAGTGC+AGG | - | chr6_3:66903371-66903390 | Msa0957110:intron | 50.0% | |
| GTTCATTGCCTGCAAGTGCA+GGG | - | chr6_3:66903372-66903391 | Msa0957110:intron | 50.0% | |
| GCACCCGCAGATAAATCTCA+TGG | + | chr6_3:66902376-66902395 | None:intergenic | 50.0% | |
| ATCCACGAGATCCTGACTGT+TGG | - | chr6_3:66903072-66903091 | Msa0957110:intron | 50.0% | |
| ATCCAACAGTCAGGATCTCG+TGG | + | chr6_3:66903077-66903096 | None:intergenic | 50.0% | |
| AAGCTCAAAGCTCCTTTGGG+TGG | - | chr6_3:66903135-66903154 | Msa0957110:intron | 50.0% | |
| ! | GATGTTGAAGGTGGTGATGC+TGG | - | chr6_3:66903180-66903199 | Msa0957110:intron | 50.0% |
| ! | AAGGTGGTGATGCTGGTAAC+AGG | - | chr6_3:66903187-66903206 | Msa0957110:intron | 50.0% |
| ! | AGGTGGTGATGCTGGTAACA+GGG | - | chr6_3:66903188-66903207 | Msa0957110:intron | 50.0% |
| AGTTCATTGCCTGCAAGTGC+AGG | - | chr6_3:66903371-66903390 | Msa0957110:intron | 50.0% | |
| GTTCATTGCCTGCAAGTGCA+GGG | - | chr6_3:66903372-66903391 | Msa0957110:intron | 50.0% | |
| !!! | TCTGCGGGTGCTGCTGATTT+TGG | - | chr6_3:66902385-66902404 | Msa0957110:intron | 55.0% |
| ! | TGGTGATGCTGGTAACAGGG+AGG | - | chr6_3:66903191-66903210 | Msa0957110:intron | 55.0% |
| !!! | TCTGCGGGTGCTGCTGATTT+TGG | - | chr6_3:66902385-66902404 | Msa0957110:intron | 55.0% |
| ! | TGGTGATGCTGGTAACAGGG+AGG | - | chr6_3:66903191-66903210 | Msa0957110:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 66901853 | 66903488 | 66901853 | ID=Msa0957110;Name=Msa0957110 |
| chr6_3 | mRNA | 66901853 | 66903488 | 66901853 | ID=Msa0957110-mRNA-1;Parent=Msa0957110;Name=Msa0957110-mRNA-1;_AED=0.21;_eAED=0.22;_QI=0|0|0.5|1|1|1|2|240|73 |
| chr6_3 | exon | 66901853 | 66902308 | 66901853 | ID=Msa0957110-mRNA-1:exon:12450;Parent=Msa0957110-mRNA-1 |
| chr6_3 | exon | 66903483 | 66903488 | 66903483 | ID=Msa0957110-mRNA-1:exon:12449;Parent=Msa0957110-mRNA-1 |
| chr6_3 | CDS | 66903483 | 66903488 | 66903483 | ID=Msa0957110-mRNA-1:cds;Parent=Msa0957110-mRNA-1 |
| chr6_3 | CDS | 66902093 | 66902308 | 66902093 | ID=Msa0957110-mRNA-1:cds;Parent=Msa0957110-mRNA-1 |
| chr6_3 | three_prime_UTR | 66901853 | 66902092 | 66901853 | ID=Msa0957110-mRNA-1:three_prime_utr;Parent=Msa0957110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
