Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190590 | XP_003628441.2 | 92.562 | 726 | 42 | 4 | 6 | 722 | 3 | 725 | 0.0 | 1330 |
| Msa1190590 | XP_003628441.2 | 93.500 | 200 | 13 | 0 | 714 | 913 | 781 | 980 | 1.24e-119 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190590 | G7LBX4 | 92.562 | 726 | 42 | 4 | 6 | 722 | 3 | 725 | 0.0 | 1330 |
| Msa1190590 | G7LBX4 | 93.500 | 200 | 13 | 0 | 714 | 913 | 781 | 980 | 5.90e-120 | 398 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa1190590 | 0.812176 | 4.837285e-51 | -8.615850e-47 |
| Msa0016040 | Msa1190590 | 0.812518 | 4.071890e-51 | -8.615850e-47 |
| Msa0027280 | Msa1190590 | 0.802237 | 6.171292e-49 | -8.615850e-47 |
| Msa0041850 | Msa1190590 | 0.802564 | 5.283468e-49 | -8.615850e-47 |
| Msa0048510 | Msa1190590 | 0.818488 | 1.909541e-52 | -8.615850e-47 |
| Msa0065020 | Msa1190590 | 0.803726 | 3.038280e-49 | -8.615850e-47 |
| Msa0077340 | Msa1190590 | 0.803611 | 3.209170e-49 | -8.615850e-47 |
| Msa0077560 | Msa1190590 | 0.849889 | 2.419553e-60 | -8.615850e-47 |
| Msa0081980 | Msa1190590 | 0.839296 | 1.725226e-57 | -8.615850e-47 |
| Msa0082020 | Msa1190590 | 0.827421 | 1.579210e-54 | -8.615850e-47 |
| Msa0094780 | Msa1190590 | 0.838736 | 2.408788e-57 | -8.615850e-47 |
| Msa0607800 | Msa1190590 | 0.801376 | 9.271023e-49 | -8.615850e-47 |
| Msa0621710 | Msa1190590 | 0.815039 | 1.133743e-51 | -8.615850e-47 |
| Msa0624900 | Msa1190590 | 0.849022 | 4.222248e-60 | -8.615850e-47 |
| Msa0641990 | Msa1190590 | 0.817384 | 3.391292e-52 | -8.615850e-47 |
| Msa0658640 | Msa1190590 | 0.829238 | 5.755765e-55 | -8.615850e-47 |
| Msa0666700 | Msa1190590 | 0.809323 | 2.002638e-50 | -8.615850e-47 |
| Msa0703600 | Msa1190590 | 0.832932 | 7.129890e-56 | -8.615850e-47 |
| Msa0709200 | Msa1190590 | 0.835400 | 1.715903e-56 | -8.615850e-47 |
| Msa0709440 | Msa1190590 | 0.863911 | 1.774537e-64 | -8.615850e-47 |
| Msa0714790 | Msa1190590 | 0.835165 | 1.967234e-56 | -8.615850e-47 |
| Msa0730930 | Msa1190590 | 0.804156 | 2.473315e-49 | -8.615850e-47 |
| Msa0735780 | Msa1190590 | 0.836537 | 8.830770e-57 | -8.615850e-47 |
| Msa0743440 | Msa1190590 | 0.807501 | 4.901602e-50 | -8.615850e-47 |
| Msa0756820 | Msa1190590 | 0.819574 | 1.081178e-52 | -8.615850e-47 |
| Msa0773630 | Msa1190590 | 0.811828 | 5.759774e-51 | -8.615850e-47 |
| Msa0795870 | Msa1190590 | 0.818650 | 1.755119e-52 | -8.615850e-47 |
| Msa0815970 | Msa1190590 | 0.808357 | 3.222755e-50 | -8.615850e-47 |
| Msa0824450 | Msa1190590 | 0.851172 | 1.054847e-60 | -8.615850e-47 |
| Msa0833650 | Msa1190590 | 0.819667 | 1.029714e-52 | -8.615850e-47 |
| Msa0836150 | Msa1190590 | 0.822081 | 2.866517e-53 | -8.615850e-47 |
| Msa0122330 | Msa1190590 | 0.815633 | 8.364890e-52 | -8.615850e-47 |
| Msa0123070 | Msa1190590 | 0.821511 | 3.883285e-53 | -8.615850e-47 |
| Msa0128460 | Msa1190590 | 0.820774 | 5.742272e-53 | -8.615850e-47 |
| Msa0174290 | Msa1190590 | 0.833057 | 6.634872e-56 | -8.615850e-47 |
| Msa0179130 | Msa1190590 | 0.808499 | 3.005489e-50 | -8.615850e-47 |
| Msa0190570 | Msa1190590 | 0.841406 | 4.844570e-58 | -8.615850e-47 |
| Msa0190730 | Msa1190590 | 0.810756 | 9.841319e-51 | -8.615850e-47 |
| Msa0194630 | Msa1190590 | 0.811914 | 5.515055e-51 | -8.615850e-47 |
| Msa0200050 | Msa1190590 | 0.802348 | 5.855057e-49 | -8.615850e-47 |
| Msa0213030 | Msa1190590 | 0.802396 | 5.723773e-49 | -8.615850e-47 |
| Msa0225610 | Msa1190590 | 0.814799 | 1.281860e-51 | -8.615850e-47 |
| Msa0367520 | Msa1190590 | 0.808048 | 3.749416e-50 | -8.615850e-47 |
| Msa0373500 | Msa1190590 | 0.841432 | 4.768661e-58 | -8.615850e-47 |
| Msa0409830 | Msa1190590 | 0.831684 | 1.451757e-55 | -8.615850e-47 |
| Msa0459740 | Msa1190590 | 0.808189 | 3.499655e-50 | -8.615850e-47 |
| Msa0481890 | Msa1190590 | 0.860985 | 1.409094e-63 | -8.615850e-47 |
| Msa1037540 | Msa1190590 | 0.802156 | 6.412294e-49 | -8.615850e-47 |
| Msa1084530 | Msa1190590 | 0.855863 | 4.740039e-62 | -8.615850e-47 |
| Msa0269210 | Msa1190590 | 0.824538 | 7.644028e-54 | -8.615850e-47 |
| Msa0271880 | Msa1190590 | 0.835418 | 1.697745e-56 | -8.615850e-47 |
| Msa0298470 | Msa1190590 | 0.821625 | 3.656114e-53 | -8.615850e-47 |
| Msa0310850 | Msa1190590 | 0.829939 | 3.886765e-55 | -8.615850e-47 |
| Msa0330380 | Msa1190590 | 0.806661 | 7.381508e-50 | -8.615850e-47 |
| Msa0343010 | Msa1190590 | 0.820240 | 7.614836e-53 | -8.615850e-47 |
| Msa0361910 | Msa1190590 | 0.848897 | 4.573978e-60 | -8.615850e-47 |
| Msa1125820 | Msa1190590 | 0.855830 | 4.848972e-62 | -8.615850e-47 |
| Msa1125990 | Msa1190590 | 0.857912 | 1.181065e-62 | -8.615850e-47 |
| Msa1132530 | Msa1190590 | 0.812285 | 4.579238e-51 | -8.615850e-47 |
| Msa1132840 | Msa1190590 | 0.817679 | 2.909748e-52 | -8.615850e-47 |
| Msa1171290 | Msa1190590 | 0.861383 | 1.066535e-63 | -8.615850e-47 |
| Msa1190590 | Msa1192570 | 0.845284 | 4.469362e-59 | -8.615850e-47 |
| Msa1190590 | Msa1200890 | 0.800983 | 1.115816e-48 | -8.615850e-47 |
| Msa1190590 | Msa1208950 | 0.829962 | 3.838767e-55 | -8.615850e-47 |
| Msa1190590 | Msa1218820 | 0.834035 | 3.782486e-56 | -8.615850e-47 |
| Msa1190590 | Msa1226520 | 0.823628 | 1.250650e-53 | -8.615850e-47 |
| Msa1190590 | Msa1244240 | 0.814277 | 1.672358e-51 | -8.615850e-47 |
| Msa1190590 | Msa1320670 | 0.805846 | 1.095917e-49 | -8.615850e-47 |
| Msa1190590 | Msa1325490 | 0.881160 | 3.024189e-70 | -8.615850e-47 |
| Msa1190590 | Msa1343170 | 0.809520 | 1.817250e-50 | -8.615850e-47 |
| Msa1190590 | Msa1343180 | 0.834453 | 2.972007e-56 | -8.615850e-47 |
| Msa1190590 | Msa1366150 | 0.804999 | 1.649621e-49 | -8.615850e-47 |
| Msa1190590 | Msa1387440 | 0.820741 | 5.844895e-53 | -8.615850e-47 |
| Msa1190590 | Msa1397270 | 0.815130 | 1.082291e-51 | -8.615850e-47 |
| Msa1190590 | Msa1405460 | 0.808581 | 2.887434e-50 | -8.615850e-47 |
| Msa1190590 | Msa1429070 | 0.803295 | 3.732816e-49 | -8.615850e-47 |
| Msa1190590 | Msa1446100 | 0.805355 | 1.389445e-49 | -8.615850e-47 |
| Msa1190590 | Msa1454010 | 0.812769 | 3.588576e-51 | -8.615850e-47 |
| Msa0483100 | Msa1190590 | 0.807753 | 4.333986e-50 | -8.615850e-47 |
| Msa0502510 | Msa1190590 | 0.807382 | 5.195983e-50 | -8.615850e-47 |
| Msa0529030 | Msa1190590 | 0.807397 | 5.157432e-50 | -8.615850e-47 |
| Msa0531960 | Msa1190590 | 0.811310 | 7.465184e-51 | -8.615850e-47 |
| Msa0534720 | Msa1190590 | 0.838309 | 3.105475e-57 | -8.615850e-47 |
| Msa0567170 | Msa1190590 | 0.832753 | 7.897995e-56 | -8.615850e-47 |
| Msa0580370 | Msa1190590 | 0.817174 | 3.781128e-52 | -8.615850e-47 |
| Msa0580810 | Msa1190590 | 0.807242 | 5.562568e-50 | -8.615850e-47 |
| Msa0888790 | Msa1190590 | 0.813151 | 2.959846e-51 | -8.615850e-47 |
| Msa0915520 | Msa1190590 | 0.830271 | 3.225284e-55 | -8.615850e-47 |
| Msa0941170 | Msa1190590 | 0.801780 | 7.660439e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190590 | MtrunA17_Chr8g0359701 | 92.562 | 726 | 42 | 4 | 6 | 722 | 3 | 725 | 0.0 | 1330 |
| Msa1190590 | MtrunA17_Chr8g0359701 | 93.500 | 200 | 13 | 0 | 714 | 913 | 781 | 980 | 1.14e-123 | 398 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190590 | AT5G52950.1 | 31.558 | 995 | 510 | 34 | 14 | 892 | 7 | 946 | 8.72e-92 | 312 |
| Msa1190590 | AT5G52950.2 | 35.217 | 761 | 388 | 25 | 14 | 726 | 7 | 710 | 6.46e-90 | 301 |
Find 220 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACTCGGCTTCTGATTT+TGG | 0.068118 | 8_1:+33699500 | Msa1190590:CDS |
| CGATGAGATTTGCGGCTTTC+GGG | 0.120490 | 8_1:-33698506 | None:intergenic |
| TCAATTGACTCTTGAGATTT+TGG | 0.125367 | 8_1:+33698998 | Msa1190590:CDS |
| GGTTTGATATATCCCAAAAT+TGG | 0.136230 | 8_1:+33698930 | Msa1190590:CDS |
| AAACCACGAAACCCCAATTT+TGG | 0.140625 | 8_1:-33698943 | None:intergenic |
| CTTTGAAAAGTGATCTTTCT+TGG | 0.154738 | 8_1:-33701306 | None:intergenic |
| TTTCTGTTCGTTGTTGTTCT+AGG | 0.195874 | 8_1:+33698964 | Msa1190590:CDS |
| CAAGGGTGCTGTGGGAATTA+AGG | 0.206701 | 8_1:+33699613 | Msa1190590:CDS |
| TCAGTGTCGGCGTCGGAATT+AGG | 0.213772 | 8_1:-33698567 | None:intergenic |
| TGAGATTGGGACTAGGAAAT+TGG | 0.214715 | 8_1:+33698851 | Msa1190590:CDS |
| GATTTCATACCCTTCTGTTT+TGG | 0.218761 | 8_1:-33701284 | None:intergenic |
| TCGATGAGATTTGCGGCTTT+CGG | 0.221153 | 8_1:-33698507 | None:intergenic |
| GTGATATGAAAGAGGGAAAT+TGG | 0.222422 | 8_1:-33698484 | None:intergenic |
| GGTTCTGCTCTTGTTCCTTT+TGG | 0.225270 | 8_1:+33698909 | Msa1190590:CDS |
| ATTAGTAAAAGAACTGTTAA+AGG | 0.257556 | 8_1:+33700198 | Msa1190590:CDS |
| CAGTCGGAGGTTTAGGTCTA+AGG | 0.261696 | 8_1:+33698746 | Msa1190590:CDS |
| GAATGCCTGCATTGCGAGTT+TGG | 0.275695 | 8_1:+33701258 | Msa1190590:CDS |
| AGTTGCTAAGGCATTGTTTC+AGG | 0.282962 | 8_1:+33701523 | Msa1190590:CDS |
| TTGTTAATTCATCTATTTAC+TGG | 0.283516 | 8_1:+33700080 | Msa1190590:CDS |
| AATTCATTTAATTCTCTTGC+AGG | 0.295391 | 8_1:+33698645 | Msa1190590:CDS |
| GAGTTGCTAGCAACTGAATT+TGG | 0.302381 | 8_1:+33699305 | Msa1190590:CDS |
| CCTTCTGCAAATATCTGATT+TGG | 0.304133 | 8_1:-33699851 | None:intergenic |
| TCGAAGGAGAAAGAGTGTTT+AGG | 0.304410 | 8_1:-33698411 | None:intergenic |
| GGGAAAGGTGGATAGGGTTT+TGG | 0.313643 | 8_1:-33698463 | None:intergenic |
| GCAAATATCTGATTTGGCTT+GGG | 0.314154 | 8_1:-33699845 | None:intergenic |
| GTTTGATATATCCCAAAATT+GGG | 0.322595 | 8_1:+33698931 | Msa1190590:CDS |
| TTGTTGTGATCTTGAAGTTT+TGG | 0.326779 | 8_1:+33699049 | Msa1190590:CDS |
| GGAATGTCAGTCGGAGGTTT+AGG | 0.327136 | 8_1:+33698739 | Msa1190590:CDS |
| GCGAAAATCTGTTCCCGTTT+GGG | 0.329348 | 8_1:+33699340 | Msa1190590:CDS |
| GACCGTGTGCTTCTTGTCAT+TGG | 0.329994 | 8_1:-33701434 | None:intergenic |
| TGCTGAGGTTGCAACGAAAA+AGG | 0.330612 | 8_1:+33699952 | Msa1190590:CDS |
| AAAGTGGAGGGAAAGAAAAT+AGG | 0.331106 | 8_1:-33698308 | None:intergenic |
| CGAAGGAGAAAGAGTGTTTA+GGG | 0.331515 | 8_1:-33698410 | None:intergenic |
| TGCAAATATCTGATTTGGCT+TGG | 0.333080 | 8_1:-33699846 | None:intergenic |
| GAATGTATGAAGGGAGATTC+AGG | 0.333558 | 8_1:+33699257 | Msa1190590:CDS |
| TGCTTTGCAGCTATGTCCTT+GGG | 0.334093 | 8_1:-33700223 | None:intergenic |
| CATGGATTTGGTGGATTCTC+AGG | 0.335829 | 8_1:+33699589 | Msa1190590:CDS |
| ATTTCACAAGAACATGGATT+TGG | 0.340682 | 8_1:+33699577 | Msa1190590:CDS |
| GGCGAAAATCTGTTCCCGTT+TGG | 0.355166 | 8_1:+33699339 | Msa1190590:CDS |
| ATCTTTATAGAGAAGATTGC+TGG | 0.357617 | 8_1:+33699378 | Msa1190590:CDS |
| TTTAAAATGCTGGATGAAAC+AGG | 0.359064 | 8_1:+33699781 | Msa1190590:CDS |
| AATGCCTGCATTGCGAGTTT+GGG | 0.361383 | 8_1:+33701259 | Msa1190590:CDS |
| GACCGTGTGTTTCTTGTCAT+TGG | 0.366056 | 8_1:-33701383 | None:intergenic |
| GAGATTGGGACTAGGAAATT+GGG | 0.366553 | 8_1:+33698852 | Msa1190590:CDS |
| CTAAGGGTGTTCATTGTAGT+TGG | 0.366811 | 8_1:+33698763 | Msa1190590:CDS |
| ATGCTTTGCAGCTATGTCCT+TGG | 0.370627 | 8_1:-33700224 | None:intergenic |
| ATGATGTGTTTGTGAAGTTT+AGG | 0.374476 | 8_1:+33699192 | Msa1190590:CDS |
| TGGGACTAGGAAATTGGGTT+GGG | 0.384135 | 8_1:+33698857 | Msa1190590:CDS |
| TAGAGAAGATTGCTGGGCTT+TGG | 0.384846 | 8_1:+33699385 | Msa1190590:CDS |
| CCTATTAAAAGAATTCATAT+TGG | 0.390807 | 8_1:-33699528 | None:intergenic |
| AGCAACTGAATTTGGCTGTC+AGG | 0.391010 | 8_1:+33699313 | Msa1190590:CDS |
| GTAAACAAGAGAATTAAATT+AGG | 0.391815 | 8_1:-33698612 | None:intergenic |
| CCACAGGTGGTTGTGTCAGC+TGG | 0.395042 | 8_1:+33699923 | Msa1190590:CDS |
| GGCTATGTCAGAAGGTTGAT+AGG | 0.401561 | 8_1:+33700101 | Msa1190590:CDS |
| TTGAACGAGTTACCTCAAAA+TGG | 0.402053 | 8_1:+33699887 | Msa1190590:CDS |
| AAGTGGAGGGAAAGAAAATA+GGG | 0.402505 | 8_1:-33698307 | None:intergenic |
| ATGTCTCTCTGATTCGGTTC+TGG | 0.403372 | 8_1:+33699217 | Msa1190590:CDS |
| AAAGAGTGTTTAGGGAGAAA+AGG | 0.405219 | 8_1:-33698402 | None:intergenic |
| TCGCTGTTAAATAAACAATC+CGG | 0.405683 | 8_1:-33701053 | None:intergenic |
| TACGTGGGTTGTTTGAGATT+GGG | 0.413353 | 8_1:+33698838 | Msa1190590:CDS |
| TCTTTCGAACAGGATTCAAC+AGG | 0.413600 | 8_1:+33700012 | Msa1190590:CDS |
| AAATTGCAAAGGAATATAGA+AGG | 0.420475 | 8_1:+33701197 | Msa1190590:CDS |
| TAGGTCATGTCTCTCTGATT+CGG | 0.422929 | 8_1:+33699211 | Msa1190590:CDS |
| ATACGTGGGTTGTTTGAGAT+TGG | 0.425220 | 8_1:+33698837 | Msa1190590:CDS |
| TTGTTGTTCTAGGGAAGTTA+AGG | 0.427135 | 8_1:+33698974 | Msa1190590:CDS |
| TCACAACAATTGTACTCAAT+AGG | 0.429558 | 8_1:-33699035 | None:intergenic |
| CATTTGCAGAAGAATGTAAG+AGG | 0.431045 | 8_1:+33701173 | Msa1190590:CDS |
| AAGGGTGCTGTGGGAATTAA+GGG | 0.431550 | 8_1:+33699614 | Msa1190590:CDS |
| CGAGGACAGCAGCAAATCAT+TGG | 0.433001 | 8_1:+33701073 | Msa1190590:CDS |
| AGCTTCTTCATGATTACCCC+TGG | 0.442582 | 8_1:+33698541 | Msa1190590:CDS |
| AGAGCCGAAGAAACGGTAAA+AGG | 0.443658 | 8_1:-33699458 | None:intergenic |
| GGCGTCGGAATTAGGTTCCC+AGG | 0.446140 | 8_1:-33698559 | None:intergenic |
| TATTATCTTTCAGAGGAGAA+TGG | 0.446387 | 8_1:-33700147 | None:intergenic |
| CTCAACAACATCTCCCAAAC+GGG | 0.448144 | 8_1:-33699353 | None:intergenic |
| AGTCATAGACCTCGTAGCTT+TGG | 0.448648 | 8_1:+33700048 | Msa1190590:CDS |
| CGCTGTTAAATAAACAATCC+GGG | 0.449830 | 8_1:-33701052 | None:intergenic |
| TTCTGTTCGTTGTTGTTCTA+GGG | 0.450145 | 8_1:+33698965 | Msa1190590:CDS |
| ACATTCTTCTGCAAATGAAA+AGG | 0.450632 | 8_1:-33701167 | None:intergenic |
| CTTTCAGAGGAGAATGGACC+TGG | 0.451514 | 8_1:-33700141 | None:intergenic |
| TTTGGAGAGGAGATTGAAAG+TGG | 0.451773 | 8_1:-33698445 | None:intergenic |
| ATCCCAAAATTGGGGTTTCG+TGG | 0.454579 | 8_1:+33698940 | Msa1190590:CDS |
| GTGTGGGAGTAACGTATCAT+TGG | 0.455687 | 8_1:-33698189 | None:intergenic |
| TGGTGGTGGTGTTGTGAAGG+AGG | 0.460789 | 8_1:-33698251 | None:intergenic |
| TTTGGTGGATTCTCAGGTCA+AGG | 0.468267 | 8_1:+33699595 | Msa1190590:CDS |
| TCTGCTTCTGTTTGTAAATG+AGG | 0.468775 | 8_1:+33701022 | Msa1190590:CDS |
| TGATATGAAAGAGGGAAATT+GGG | 0.469378 | 8_1:-33698483 | None:intergenic |
| TGTTGTGAAGGAGGAGGAGT+GGG | 0.470230 | 8_1:-33698242 | None:intergenic |
| GGTGTTCATTGTAGTTGGAT+TGG | 0.471438 | 8_1:+33698768 | Msa1190590:CDS |
| AGTTGGATTGGTGTTAATAG+TGG | 0.472470 | 8_1:+33698780 | Msa1190590:CDS |
| GCGAAAAGAGAGGTTGAAAG+TGG | 0.478832 | 8_1:-33698324 | None:intergenic |
| TTGGGATATATCAAACCAAA+AGG | 0.480635 | 8_1:-33698924 | None:intergenic |
| AGGAGATTGAAAGTGGAGAA+AGG | 0.481724 | 8_1:-33698438 | None:intergenic |
| GTGAAAATGATGTCGGTAAT+GGG | 0.483037 | 8_1:+33701123 | Msa1190590:CDS |
| ATCATATACCAAATCACAAA+AGG | 0.483932 | 8_1:-33699690 | None:intergenic |
| TGGTGGTGGTGGTGATGATA+AGG | 0.484044 | 8_1:+33698800 | Msa1190590:CDS |
| GTGGAAGGAAGGAGAGGTTG+TGG | 0.488540 | 8_1:+33699117 | Msa1190590:CDS |
| GGAAATTGGGAAAGGTGGAT+AGG | 0.491520 | 8_1:-33698470 | None:intergenic |
| GTGTTGTGAAGGAGGAGGAG+TGG | 0.492896 | 8_1:-33698243 | None:intergenic |
| TTTACAAGGTGGTGGAAGGA+AGG | 0.495046 | 8_1:+33699106 | Msa1190590:CDS |
| TGTTCGGTGATTATAGTAGT+TGG | 0.496366 | 8_1:-33700289 | None:intergenic |
| AAAGAGAGGTTGAAAGTGGA+GGG | 0.496489 | 8_1:-33698320 | None:intergenic |
| TTGGGACTAGGAAATTGGGT+TGG | 0.496846 | 8_1:+33698856 | Msa1190590:CDS |
| TGTCATAACATGCCCTTGTT+CGG | 0.497159 | 8_1:-33701346 | None:intergenic |
| TAGAGAAAGAGAGATGAGGT+GGG | 0.497897 | 8_1:-33698371 | None:intergenic |
| TCACAAGAACATGGATTTGG+TGG | 0.498628 | 8_1:+33699580 | Msa1190590:CDS |
| GGGGCCCAAACTCGCAATGC+AGG | 0.500686 | 8_1:-33701263 | None:intergenic |
| TTAGAGAAAGAGAGATGAGG+TGG | 0.501079 | 8_1:-33698372 | None:intergenic |
| TTCTCAGGTCAAGGGTGCTG+TGG | 0.503409 | 8_1:+33699604 | Msa1190590:CDS |
| ATTGGTGTTAATAGTGGTGG+TGG | 0.503691 | 8_1:+33698786 | Msa1190590:CDS |
| GGTATATGATCAATTTGAGA+TGG | 0.504143 | 8_1:+33699703 | Msa1190590:CDS |
| GAGGGAATCGATGAGATTTG+CGG | 0.509287 | 8_1:-33698514 | None:intergenic |
| ATACTCTCTAACAACATGTT+CGG | 0.509656 | 8_1:-33700305 | None:intergenic |
| CAAATATCTGATTTGGCTTG+GGG | 0.510230 | 8_1:-33699844 | None:intergenic |
| AAGAGGGAAATTGGGAAAGG+TGG | 0.513842 | 8_1:-33698475 | None:intergenic |
| AGTGTTTAGGGAGAAAAGGA+TGG | 0.516378 | 8_1:-33698398 | None:intergenic |
| GAAATTGGGAAAGGTGGATA+GGG | 0.517378 | 8_1:-33698469 | None:intergenic |
| AGAAGAGAAGAAGAATTTGA+AGG | 0.517755 | 8_1:-33698346 | None:intergenic |
| GAATTAAATGAATTGAAGAA+AGG | 0.518176 | 8_1:-33698636 | None:intergenic |
| GGTGAAAATGATGTCGGTAA+TGG | 0.518870 | 8_1:+33701122 | Msa1190590:CDS |
| TTTATGAACAATGTCTTCAA+GGG | 0.522676 | 8_1:-33700982 | None:intergenic |
| ACTCAACAACATCTCCCAAA+CGG | 0.525892 | 8_1:-33699354 | None:intergenic |
| AGATAAAAGAGCCGAAGAAA+CGG | 0.526231 | 8_1:-33699465 | None:intergenic |
| GGGACTAGGAAATTGGGTTG+GGG | 0.528099 | 8_1:+33698858 | Msa1190590:CDS |
| GCAACTGAATTTGGCTGTCA+GGG | 0.529058 | 8_1:+33699314 | Msa1190590:CDS |
| GTTGACAATGGTAAAGGTGG+TGG | 0.529773 | 8_1:+33699413 | Msa1190590:CDS |
| GGTGTTAATAGTGGTGGTGG+TGG | 0.533732 | 8_1:+33698789 | Msa1190590:CDS |
| TGGATTGGTGTTAATAGTGG+TGG | 0.536890 | 8_1:+33698783 | Msa1190590:CDS |
| TGGTGGTGTTGTGAAGGAGG+AGG | 0.537739 | 8_1:-33698248 | None:intergenic |
| CATGCATTATTATCTTTCAG+AGG | 0.540832 | 8_1:-33700154 | None:intergenic |
| TCATAAAATCTACAACAGAA+TGG | 0.542564 | 8_1:+33700998 | Msa1190590:CDS |
| GAATTTGAAGGCGAAAAGAG+AGG | 0.542776 | 8_1:-33698334 | None:intergenic |
| TCTTTATAGAGAAGATTGCT+GGG | 0.543170 | 8_1:+33699379 | Msa1190590:CDS |
| ACCACAATTACATGGCTGAT+GGG | 0.543663 | 8_1:+33701483 | Msa1190590:CDS |
| GGAAACAATTCCTCAGATCC+AGG | 0.543683 | 8_1:+33700123 | Msa1190590:CDS |
| TTGAGAATTCTTTCTGTGAG+AGG | 0.544953 | 8_1:+33698700 | Msa1190590:CDS |
| TTGTGGAATGTGTGTTCAGA+TGG | 0.545587 | 8_1:+33699134 | Msa1190590:CDS |
| TCTCAGGTCAAGGGTGCTGT+GGG | 0.546577 | 8_1:+33699605 | Msa1190590:CDS |
| TGTGTTGTCAGTGTCGGCGT+CGG | 0.549297 | 8_1:-33698574 | None:intergenic |
| AAAGGTGGTGGATCTTGTGT+TGG | 0.550127 | 8_1:+33699425 | Msa1190590:CDS |
| TTGGTGGATTCTCAGGTCAA+GGG | 0.550615 | 8_1:+33699596 | Msa1190590:CDS |
| GACCACAATTACATGGCTGA+TGG | 0.551502 | 8_1:+33701482 | Msa1190590:CDS |
| GGTTGTTTGAGATTGGGACT+AGG | 0.551975 | 8_1:+33698844 | Msa1190590:CDS |
| AATTGCAAAGGAATATAGAA+GGG | 0.552221 | 8_1:+33701198 | Msa1190590:CDS |
| TCCCATCAGCCATGTAATTG+TGG | 0.552739 | 8_1:-33701484 | None:intergenic |
| TCTCAGACATCTGATGCAGC+AGG | 0.553878 | 8_1:+33700265 | Msa1190590:CDS |
| AGTTGGTGGTGGTGTTGTGA+AGG | 0.555458 | 8_1:-33698254 | None:intergenic |
| GATGTGAATTTACAAGGTGG+TGG | 0.556488 | 8_1:+33699098 | Msa1190590:CDS |
| CTGAATTTGGCTGTCAGGGG+CGG | 0.556844 | 8_1:+33699318 | Msa1190590:CDS |
| ATCATGAAGAAGCTGAGTGA+GGG | 0.557936 | 8_1:-33698532 | None:intergenic |
| GCGTCGGAATTAGGTTCCCA+GGG | 0.558197 | 8_1:-33698558 | None:intergenic |
| TATTTACTGGCTATGTCAGA+AGG | 0.559398 | 8_1:+33700093 | Msa1190590:CDS |
| AACGGCGAAATTGAAAGTTA+CGG | 0.560002 | 8_1:+33699157 | Msa1190590:CDS |
| AAAAGAGAGGTTGAAAGTGG+AGG | 0.562608 | 8_1:-33698321 | None:intergenic |
| CATCTGAACCTATTGACTGC+GGG | 0.563441 | 8_1:-33701460 | None:intergenic |
| TGAATTTACAAGGTGGTGGA+AGG | 0.564516 | 8_1:+33699102 | Msa1190590:CDS |
| GCATGAGGTTTACTATGCGA+TGG | 0.565898 | 8_1:+33699730 | Msa1190590:CDS |
| AGTATGTGGTTCAGTTGCTA+AGG | 0.566719 | 8_1:+33701511 | Msa1190590:CDS |
| AGATTGCTGGGCTTTGGTGT+CGG | 0.568158 | 8_1:+33699391 | Msa1190590:CDS |
| TGTAAATGAGGATGAAGCCC+CGG | 0.573105 | 8_1:+33701034 | Msa1190590:CDS |
| TTCAGATGACCACAATTACA+TGG | 0.573240 | 8_1:+33701475 | Msa1190590:CDS |
| AGTGGAGAAAGGATGATCGA+AGG | 0.573497 | 8_1:-33698427 | None:intergenic |
| AGTTTGGGCCCCAAAACAGA+AGG | 0.577145 | 8_1:+33701274 | Msa1190590:CDS |
| GCTATGTCAGAAGGTTGATA+GGG | 0.578195 | 8_1:+33700102 | Msa1190590:CDS |
| ATTCTGACAAAGTCAGATCA+TGG | 0.578418 | 8_1:-33699820 | None:intergenic |
| GTGTCGGTTGACAATGGTAA+AGG | 0.578965 | 8_1:+33699407 | Msa1190590:CDS |
| AGAAGTTGTGTTGTCAGTGT+CGG | 0.580378 | 8_1:-33698580 | None:intergenic |
| TGGTGAACAGCTAGTCCCAC+AGG | 0.586283 | 8_1:+33699907 | Msa1190590:CDS |
| CCAGCTGACACAACCACCTG+TGG | 0.587485 | 8_1:-33699923 | None:intergenic |
| TTTGATATATCCCAAAATTG+GGG | 0.588586 | 8_1:+33698932 | Msa1190590:CDS |
| TGATTCGGTTCTGGTGCGTG+AGG | 0.589110 | 8_1:+33699226 | Msa1190590:CDS |
| ATTTGAGATGGATCTGCATG+AGG | 0.589438 | 8_1:+33699715 | Msa1190590:CDS |
| GCTTCTTCATGATTACCCCT+GGG | 0.589735 | 8_1:+33698542 | Msa1190590:CDS |
| CCAAATCAGATATTTGCAGA+AGG | 0.592593 | 8_1:+33699851 | Msa1190590:CDS |
| GGGGAGGATGTGAATTTACA+AGG | 0.594209 | 8_1:+33699092 | Msa1190590:CDS |
| AAGGTGGTGGAAGGAAGGAG+AGG | 0.597324 | 8_1:+33699111 | Msa1190590:CDS |
| AGAACTGTTAAAGGATCCCA+AGG | 0.597965 | 8_1:+33700207 | Msa1190590:CDS |
| GGAGAATGGACCTGGATCTG+AGG | 0.599289 | 8_1:-33700133 | None:intergenic |
| TGGTGGTGATGATAAGGATG+AGG | 0.603041 | 8_1:+33698806 | Msa1190590:CDS |
| AGTCGGAGGTTTAGGTCTAA+GGG | 0.603476 | 8_1:+33698747 | Msa1190590:CDS |
| TCGCATATTTCACAAGAACA+TGG | 0.604505 | 8_1:+33699571 | Msa1190590:CDS |
| CAAATCAGATATTTGCAGAA+GGG | 0.604754 | 8_1:+33699852 | Msa1190590:CDS |
| AGTTTAGAGAAAGAGAGATG+AGG | 0.610468 | 8_1:-33698375 | None:intergenic |
| GCTTTCGGGTGATATGAAAG+AGG | 0.611011 | 8_1:-33698492 | None:intergenic |
| CCAAAATCAGAAGCCGAGTG+TGG | 0.615958 | 8_1:-33699500 | None:intergenic |
| AATTCGCAACGAATCCTCAC+CGG | 0.618126 | 8_1:-33698679 | None:intergenic |
| TGAAAGAGGGAAATTGGGAA+AGG | 0.618451 | 8_1:-33698478 | None:intergenic |
| CAGCTGACACAACCACCTGT+GGG | 0.621240 | 8_1:-33699922 | None:intergenic |
| GGTGATGATAAGGATGAGGT+TGG | 0.624373 | 8_1:+33698810 | Msa1190590:CDS |
| ATGTAAGAGGAAAATTGCAA+AGG | 0.624974 | 8_1:+33701186 | Msa1190590:CDS |
| GAAGAACGATGCGGTTTGTG+TGG | 0.627819 | 8_1:-33698206 | None:intergenic |
| TAATAATGCATGTAGTAGCA+TGG | 0.628562 | 8_1:+33700165 | Msa1190590:CDS |
| CTTTCGAACAGGATTCAACA+GGG | 0.630126 | 8_1:+33700013 | Msa1190590:CDS |
| AATCATGAAGAAGCTGAGTG+AGG | 0.630853 | 8_1:-33698533 | None:intergenic |
| ATGTACTTCGAAACCTCACA+TGG | 0.630930 | 8_1:+33699663 | Msa1190590:CDS |
| TCGGTTGACAATGGTAAAGG+TGG | 0.634473 | 8_1:+33699410 | Msa1190590:CDS |
| CTTTCGGGTGATATGAAAGA+GGG | 0.636994 | 8_1:-33698491 | None:intergenic |
| GAATGTGTGTTCAGATGGAA+CGG | 0.639940 | 8_1:+33699139 | Msa1190590:CDS |
| ATTGCAAAGGAATATAGAAG+GGG | 0.643022 | 8_1:+33701199 | Msa1190590:CDS |
| CAACTGAATTTGGCTGTCAG+GGG | 0.644940 | 8_1:+33699315 | Msa1190590:CDS |
| GAAATGGGTGAAAATGATGT+CGG | 0.645772 | 8_1:+33701116 | Msa1190590:CDS |
| CACAAAAGGAGCTCCATGTG+AGG | 0.649703 | 8_1:-33699676 | None:intergenic |
| AAGAACGATGCGGTTTGTGT+GGG | 0.655015 | 8_1:-33698205 | None:intergenic |
| TCATCTGAACCTATTGACTG+CGG | 0.657698 | 8_1:-33701461 | None:intergenic |
| GCTGTTAAATAAACAATCCG+GGG | 0.658423 | 8_1:-33701051 | None:intergenic |
| GCTTTGGTGTCGGTTGACAA+TGG | 0.659635 | 8_1:+33699401 | Msa1190590:CDS |
| TGCTGCATCAGATGTCTGAG+AGG | 0.663550 | 8_1:-33700263 | None:intergenic |
| GATGAGGTTGGTATCATACG+TGG | 0.663905 | 8_1:+33698822 | Msa1190590:CDS |
| CGCCAATGACAAGAAACACA+CGG | 0.669971 | 8_1:+33701381 | Msa1190590:CDS |
| CGCCAATGACAAGAAGCACA+CGG | 0.669971 | 8_1:+33701432 | Msa1190590:CDS |
| ATGAGGTTGGTATCATACGT+GGG | 0.680628 | 8_1:+33698823 | Msa1190590:CDS |
| GTTTGGGCCCCAAAACAGAA+GGG | 0.683185 | 8_1:+33701275 | Msa1190590:CDS |
| GCTGATGGGAATCAAGTATG+TGG | 0.688438 | 8_1:+33701497 | Msa1190590:CDS |
| GTCGCTCTGCCAAAGCTACG+AGG | 0.690345 | 8_1:-33700057 | None:intergenic |
| TTGCAAAGGAATATAGAAGG+GGG | 0.695945 | 8_1:+33701200 | Msa1190590:CDS |
| GTCAGCTGGAATTAATGCTG+AGG | 0.696346 | 8_1:+33699937 | Msa1190590:CDS |
| GGATTGTTTATTTAACAGCG+AGG | 0.698970 | 8_1:+33701055 | Msa1190590:CDS |
| TGAACAGCTAGTCCCACAGG+TGG | 0.739835 | 8_1:+33699910 | Msa1190590:CDS |
| GATCTATGAGAAGAACGATG+CGG | 0.745129 | 8_1:-33698215 | None:intergenic |
| GAGGATGTGAATTTACAAGG+TGG | 0.746096 | 8_1:+33699095 | Msa1190590:CDS |
| CGTCGGAATTAGGTTCCCAG+GGG | 0.749727 | 8_1:-33698557 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATCATAAACATAAATTA+CGG | - | chr8_1:33700347-33700366 | None:intergenic | 10.0% |
| !!! | TATTTTGTTTTCTAAATTTA+CGG | + | chr8_1:33700373-33700392 | Msa1190590:intron | 10.0% |
| !!! | ACAATATATATGACATTTTT+CGG | + | chr8_1:33700796-33700815 | Msa1190590:intron | 15.0% |
| !! | GTAAACAAGAGAATTAAATT+AGG | - | chr8_1:33698615-33698634 | None:intergenic | 20.0% |
| !! | GAATTAAATGAATTGAAGAA+AGG | - | chr8_1:33698639-33698658 | None:intergenic | 20.0% |
| !! | CCTATTAAAAGAATTCATAT+TGG | - | chr8_1:33699531-33699550 | None:intergenic | 20.0% |
| !!! | CCAATATGAATTCTTTTAAT+AGG | + | chr8_1:33699528-33699547 | Msa1190590:CDS | 20.0% |
| !! | TTGTTAATTCATCTATTTAC+TGG | + | chr8_1:33700080-33700099 | Msa1190590:CDS | 20.0% |
| !! | ATTAGTAAAAGAACTGTTAA+AGG | + | chr8_1:33700198-33700217 | Msa1190590:CDS | 20.0% |
| !! | TCATATCTAATTCTTACTTA+AGG | - | chr8_1:33700433-33700452 | None:intergenic | 20.0% |
| !!! | TCATTGGATAGAAAATTTTA+CGG | + | chr8_1:33701089-33701108 | Msa1190590:CDS | 20.0% |
| ! | AATTCATTTAATTCTCTTGC+AGG | + | chr8_1:33698645-33698664 | Msa1190590:CDS | 25.0% |
| !!! | AGAGGTTTTTAGGTTTTTTT+GGG | + | chr8_1:33698718-33698737 | Msa1190590:CDS | 25.0% |
| ! | GTTTGATATATCCCAAAATT+GGG | + | chr8_1:33698931-33698950 | Msa1190590:CDS | 25.0% |
| ! | TTTGATATATCCCAAAATTG+GGG | + | chr8_1:33698932-33698951 | Msa1190590:CDS | 25.0% |
| !!! | ATCTTGAAGTTTTGGATTTT+AGG | + | chr8_1:33699057-33699076 | Msa1190590:CDS | 25.0% |
| !!! | TCTTGAAGTTTTGGATTTTA+GGG | + | chr8_1:33699058-33699077 | Msa1190590:CDS | 25.0% |
| !! | ATGAATTCTTTTAATAGGAC+AGG | + | chr8_1:33699533-33699552 | Msa1190590:CDS | 25.0% |
| ! | ATCATATACCAAATCACAAA+AGG | - | chr8_1:33699693-33699712 | None:intergenic | 25.0% |
| !!! | AGTTGAAGTTTTTAAAATGC+TGG | + | chr8_1:33699771-33699790 | Msa1190590:CDS | 25.0% |
| !!! | TTTTTAGAAATCTTTCGAAC+AGG | + | chr8_1:33700002-33700021 | Msa1190590:CDS | 25.0% |
| ! | ATTACGGAAAATGTGATAAA+AGG | - | chr8_1:33700331-33700350 | None:intergenic | 25.0% |
| !!! | ACTGCAAATTTTATTTCGAT+TGG | + | chr8_1:33700453-33700472 | Msa1190590:intron | 25.0% |
| !! | ATTGGAAATTTTACAATCAG+AGG | + | chr8_1:33700471-33700490 | Msa1190590:intron | 25.0% |
| !!! | AGTTTGATTCTCTTTTTTCA+TGG | + | chr8_1:33700868-33700887 | Msa1190590:intron | 25.0% |
| ! | TTTATGAACAATGTCTTCAA+GGG | - | chr8_1:33700985-33701004 | None:intergenic | 25.0% |
| !! | TTTTATGAACAATGTCTTCA+AGG | - | chr8_1:33700986-33701005 | None:intergenic | 25.0% |
| ! | TCATAAAATCTACAACAGAA+TGG | + | chr8_1:33700998-33701017 | Msa1190590:CDS | 25.0% |
| !! | AAAATTTTACGGAGATGAAA+TGG | + | chr8_1:33701100-33701119 | Msa1190590:CDS | 25.0% |
| !! | AAATTTTACGGAGATGAAAT+GGG | + | chr8_1:33701101-33701120 | Msa1190590:CDS | 25.0% |
| ! | AAATTGCAAAGGAATATAGA+AGG | + | chr8_1:33701197-33701216 | Msa1190590:CDS | 25.0% |
| ! | AATTGCAAAGGAATATAGAA+GGG | + | chr8_1:33701198-33701217 | Msa1190590:CDS | 25.0% |
| !! | ACTTTTCAAAGATTCCAAAA+AGG | + | chr8_1:33701318-33701337 | Msa1190590:CDS | 25.0% |
| !! | AATGTTTTTGATGTAGTTGG+TGG | - | chr8_1:33698271-33698290 | None:intergenic | 30.0% |
| !! | GAGAATGTTTTTGATGTAGT+TGG | - | chr8_1:33698274-33698293 | None:intergenic | 30.0% |
| !!! | AGAAAATAGGGTTTTAGAAG+TGG | - | chr8_1:33698298-33698317 | None:intergenic | 30.0% |
| AGAAGAGAAGAAGAATTTGA+AGG | - | chr8_1:33698349-33698368 | None:intergenic | 30.0% | |
| TGATATGAAAGAGGGAAATT+GGG | - | chr8_1:33698486-33698505 | None:intergenic | 30.0% | |
| !!! | GAGAGGTTTTTAGGTTTTTT+TGG | + | chr8_1:33698717-33698736 | Msa1190590:CDS | 30.0% |
| ! | TCTTTGGATTCAATTTTGCT+TGG | + | chr8_1:33698888-33698907 | Msa1190590:CDS | 30.0% |
| TTGGGATATATCAAACCAAA+AGG | - | chr8_1:33698927-33698946 | None:intergenic | 30.0% | |
| GGTTTGATATATCCCAAAAT+TGG | + | chr8_1:33698930-33698949 | Msa1190590:CDS | 30.0% | |
| !! | TCAATTGACTCTTGAGATTT+TGG | + | chr8_1:33698998-33699017 | Msa1190590:CDS | 30.0% |
| ! | TTGAGATTTTGGATGTGAAT+GGG | + | chr8_1:33699009-33699028 | Msa1190590:CDS | 30.0% |
| TCACAACAATTGTACTCAAT+AGG | - | chr8_1:33699038-33699057 | None:intergenic | 30.0% | |
| ! | TTGTTGTGATCTTGAAGTTT+TGG | + | chr8_1:33699049-33699068 | Msa1190590:CDS | 30.0% |
| !!! | GTTTTGGATTTTAGGGTTTT+TGG | + | chr8_1:33699065-33699084 | Msa1190590:CDS | 30.0% |
| !!! | ATTTTAGGGTTTTTGGTAGA+GGG | + | chr8_1:33699072-33699091 | Msa1190590:CDS | 30.0% |
| ATGATGTGTTTGTGAAGTTT+AGG | + | chr8_1:33699192-33699211 | Msa1190590:CDS | 30.0% | |
| ATCTTTATAGAGAAGATTGC+TGG | + | chr8_1:33699378-33699397 | Msa1190590:CDS | 30.0% | |
| TCTTTATAGAGAAGATTGCT+GGG | + | chr8_1:33699379-33699398 | Msa1190590:CDS | 30.0% | |
| ATTTCACAAGAACATGGATT+TGG | + | chr8_1:33699577-33699596 | Msa1190590:CDS | 30.0% | |
| GGTATATGATCAATTTGAGA+TGG | + | chr8_1:33699703-33699722 | Msa1190590:CDS | 30.0% | |
| ! | TTTAAAATGCTGGATGAAAC+AGG | + | chr8_1:33699781-33699800 | Msa1190590:CDS | 30.0% |
| CAAATCAGATATTTGCAGAA+GGG | + | chr8_1:33699852-33699871 | Msa1190590:CDS | 30.0% | |
| TATTATCTTTCAGAGGAGAA+TGG | - | chr8_1:33700150-33700169 | None:intergenic | 30.0% | |
| CATGCATTATTATCTTTCAG+AGG | - | chr8_1:33700157-33700176 | None:intergenic | 30.0% | |
| TAATAATGCATGTAGTAGCA+TGG | + | chr8_1:33700165-33700184 | Msa1190590:CDS | 30.0% | |
| ATACTCTCTAACAACATGTT+CGG | - | chr8_1:33700308-33700327 | None:intergenic | 30.0% | |
| ! | GAAATTTTACAATCAGAGGT+TGG | + | chr8_1:33700475-33700494 | Msa1190590:intron | 30.0% |
| TTTGACAAACTTCTGTTTAC+TGG | - | chr8_1:33700518-33700537 | None:intergenic | 30.0% | |
| TTGGAACCTTGAAAATTATG+TGG | + | chr8_1:33700597-33700616 | Msa1190590:intron | 30.0% | |
| ! | TCTTTGCCACATAATTTTCA+AGG | - | chr8_1:33700606-33700625 | None:intergenic | 30.0% |
| TGCGTGAACTATGAAATTTA+AGG | + | chr8_1:33700715-33700734 | Msa1190590:intron | 30.0% | |
| AGGATTTCTTAGTTTCTGTT+TGG | + | chr8_1:33700735-33700754 | Msa1190590:intron | 30.0% | |
| !! | GTGTGTGCTTTATTTACTAT+AGG | - | chr8_1:33700920-33700939 | None:intergenic | 30.0% |
| TCGCTGTTAAATAAACAATC+CGG | - | chr8_1:33701056-33701075 | None:intergenic | 30.0% | |
| ACATTCTTCTGCAAATGAAA+AGG | - | chr8_1:33701170-33701189 | None:intergenic | 30.0% | |
| ATGTAAGAGGAAAATTGCAA+AGG | + | chr8_1:33701186-33701205 | Msa1190590:CDS | 30.0% | |
| ATTGCAAAGGAATATAGAAG+GGG | + | chr8_1:33701199-33701218 | Msa1190590:CDS | 30.0% | |
| ! | ATTTCATACCCTTCTGTTTT+GGG | - | chr8_1:33701286-33701305 | None:intergenic | 30.0% |
| ! | CTTTGAAAAGTGATCTTTCT+TGG | - | chr8_1:33701309-33701328 | None:intergenic | 30.0% |
| AAGTGGAGGGAAAGAAAATA+GGG | - | chr8_1:33698310-33698329 | None:intergenic | 35.0% | |
| AAAGTGGAGGGAAAGAAAAT+AGG | - | chr8_1:33698311-33698330 | None:intergenic | 35.0% | |
| AGTTTAGAGAAAGAGAGATG+AGG | - | chr8_1:33698378-33698397 | None:intergenic | 35.0% | |
| !! | AAAGAGTGTTTAGGGAGAAA+AGG | - | chr8_1:33698405-33698424 | None:intergenic | 35.0% |
| GTGATATGAAAGAGGGAAAT+TGG | - | chr8_1:33698487-33698506 | None:intergenic | 35.0% | |
| TTGAGAATTCTTTCTGTGAG+AGG | + | chr8_1:33698700-33698719 | Msa1190590:CDS | 35.0% | |
| ! | TCTTTCTGTGAGAGGTTTTT+AGG | + | chr8_1:33698708-33698727 | Msa1190590:CDS | 35.0% |
| !!! | GTTTTTTTGGGAATGTCAGT+CGG | + | chr8_1:33698730-33698749 | Msa1190590:CDS | 35.0% |
| !! | AGTTGGATTGGTGTTAATAG+TGG | + | chr8_1:33698780-33698799 | Msa1190590:CDS | 35.0% |
| ! | TTTCTGTTCGTTGTTGTTCT+AGG | + | chr8_1:33698964-33698983 | Msa1190590:CDS | 35.0% |
| ! | TTCTGTTCGTTGTTGTTCTA+GGG | + | chr8_1:33698965-33698984 | Msa1190590:CDS | 35.0% |
| !! | TTGTTGTTCTAGGGAAGTTA+AGG | + | chr8_1:33698974-33698993 | Msa1190590:CDS | 35.0% |
| ! | CTTGAGATTTTGGATGTGAA+TGG | + | chr8_1:33699008-33699027 | Msa1190590:CDS | 35.0% |
| !!! | GATTTTAGGGTTTTTGGTAG+AGG | + | chr8_1:33699071-33699090 | Msa1190590:CDS | 35.0% |
| !!! | TTTTAGGGTTTTTGGTAGAG+GGG | + | chr8_1:33699073-33699092 | Msa1190590:CDS | 35.0% |
| AACGGCGAAATTGAAAGTTA+CGG | + | chr8_1:33699157-33699176 | Msa1190590:CDS | 35.0% | |
| !!! | GTTTTAGGGGAATGTATGAA+GGG | + | chr8_1:33699248-33699267 | Msa1190590:CDS | 35.0% |
| ! | TAGACCTTTTACCGTTTCTT+CGG | + | chr8_1:33699454-33699473 | Msa1190590:CDS | 35.0% |
| AGATAAAAGAGCCGAAGAAA+CGG | - | chr8_1:33699468-33699487 | None:intergenic | 35.0% | |
| ! | TTCGGCTCTTTTATCTGTTT+TGG | + | chr8_1:33699472-33699491 | Msa1190590:CDS | 35.0% |
| TCGCATATTTCACAAGAACA+TGG | + | chr8_1:33699571-33699590 | Msa1190590:CDS | 35.0% | |
| ATTCTGACAAAGTCAGATCA+TGG | - | chr8_1:33699823-33699842 | None:intergenic | 35.0% | |
| !! | CAAATATCTGATTTGGCTTG+GGG | - | chr8_1:33699847-33699866 | None:intergenic | 35.0% |
| !! | GCAAATATCTGATTTGGCTT+GGG | - | chr8_1:33699848-33699867 | None:intergenic | 35.0% |
| !! | TGCAAATATCTGATTTGGCT+TGG | - | chr8_1:33699849-33699868 | None:intergenic | 35.0% |
| CCTTCTGCAAATATCTGATT+TGG | - | chr8_1:33699854-33699873 | None:intergenic | 35.0% | |
| CCAAATCAGATATTTGCAGA+AGG | + | chr8_1:33699851-33699870 | Msa1190590:CDS | 35.0% | |
| TTGAACGAGTTACCTCAAAA+TGG | + | chr8_1:33699887-33699906 | Msa1190590:CDS | 35.0% | |
| ! | TATTTACTGGCTATGTCAGA+AGG | + | chr8_1:33700093-33700112 | Msa1190590:CDS | 35.0% |
| ! | TGTTCGGTGATTATAGTAGT+TGG | - | chr8_1:33700292-33700311 | None:intergenic | 35.0% |
| ! | ACTGAATGTTCTCTAAGAGT+AGG | - | chr8_1:33700549-33700568 | None:intergenic | 35.0% |
| TGGCAAAGATCATAAAAAGC+AGG | + | chr8_1:33700617-33700636 | Msa1190590:intron | 35.0% | |
| GTCATAATTGCAGCAAAATG+AGG | - | chr8_1:33700778-33700797 | None:intergenic | 35.0% | |
| TCTGCTTCTGTTTGTAAATG+AGG | + | chr8_1:33701022-33701041 | Msa1190590:CDS | 35.0% | |
| GCTGTTAAATAAACAATCCG+GGG | - | chr8_1:33701054-33701073 | None:intergenic | 35.0% | |
| CGCTGTTAAATAAACAATCC+GGG | - | chr8_1:33701055-33701074 | None:intergenic | 35.0% | |
| GGATTGTTTATTTAACAGCG+AGG | + | chr8_1:33701055-33701074 | Msa1190590:CDS | 35.0% | |
| GAAATGGGTGAAAATGATGT+CGG | + | chr8_1:33701116-33701135 | Msa1190590:CDS | 35.0% | |
| GTGAAAATGATGTCGGTAAT+GGG | + | chr8_1:33701123-33701142 | Msa1190590:CDS | 35.0% | |
| CATTTGCAGAAGAATGTAAG+AGG | + | chr8_1:33701173-33701192 | Msa1190590:CDS | 35.0% | |
| TTGCAAAGGAATATAGAAGG+GGG | + | chr8_1:33701200-33701219 | Msa1190590:CDS | 35.0% | |
| ! | TTTCATACCCTTCTGTTTTG+GGG | - | chr8_1:33701285-33701304 | None:intergenic | 35.0% |
| ! | GATTTCATACCCTTCTGTTT+TGG | - | chr8_1:33701287-33701306 | None:intergenic | 35.0% |
| AAAAAGGAAAGACCGAACAA+GGG | + | chr8_1:33701334-33701353 | Msa1190590:CDS | 35.0% | |
| TTCAGATGACCACAATTACA+TGG | + | chr8_1:33701475-33701494 | Msa1190590:CDS | 35.0% | |
| GATCTATGAGAAGAACGATG+CGG | - | chr8_1:33698218-33698237 | None:intergenic | 40.0% | |
| !!! | GTTTTTGATGTAGTTGGTGG+TGG | - | chr8_1:33698268-33698287 | None:intergenic | 40.0% |
| AAAGAGAGGTTGAAAGTGGA+GGG | - | chr8_1:33698323-33698342 | None:intergenic | 40.0% | |
| AAAAGAGAGGTTGAAAGTGG+AGG | - | chr8_1:33698324-33698343 | None:intergenic | 40.0% | |
| GAATTTGAAGGCGAAAAGAG+AGG | - | chr8_1:33698337-33698356 | None:intergenic | 40.0% | |
| TAGAGAAAGAGAGATGAGGT+GGG | - | chr8_1:33698374-33698393 | None:intergenic | 40.0% | |
| TTAGAGAAAGAGAGATGAGG+TGG | - | chr8_1:33698375-33698394 | None:intergenic | 40.0% | |
| AGTGTTTAGGGAGAAAAGGA+TGG | - | chr8_1:33698401-33698420 | None:intergenic | 40.0% | |
| !! | CGAAGGAGAAAGAGTGTTTA+GGG | - | chr8_1:33698413-33698432 | None:intergenic | 40.0% |
| !! | TCGAAGGAGAAAGAGTGTTT+AGG | - | chr8_1:33698414-33698433 | None:intergenic | 40.0% |
| AGGAGATTGAAAGTGGAGAA+AGG | - | chr8_1:33698441-33698460 | None:intergenic | 40.0% | |
| TTTGGAGAGGAGATTGAAAG+TGG | - | chr8_1:33698448-33698467 | None:intergenic | 40.0% | |
| GAAATTGGGAAAGGTGGATA+GGG | - | chr8_1:33698472-33698491 | None:intergenic | 40.0% | |
| TGAAAGAGGGAAATTGGGAA+AGG | - | chr8_1:33698481-33698500 | None:intergenic | 40.0% | |
| ! | CTTTCGGGTGATATGAAAGA+GGG | - | chr8_1:33698494-33698513 | None:intergenic | 40.0% |
| ATCATGAAGAAGCTGAGTGA+GGG | - | chr8_1:33698535-33698554 | None:intergenic | 40.0% | |
| AATCATGAAGAAGCTGAGTG+AGG | - | chr8_1:33698536-33698555 | None:intergenic | 40.0% | |
| AGAAGTTGTGTTGTCAGTGT+CGG | - | chr8_1:33698583-33698602 | None:intergenic | 40.0% | |
| !!! | CTTGCAGGTTTTTTCGATTC+CGG | + | chr8_1:33698660-33698679 | Msa1190590:CDS | 40.0% |
| !! | CTAAGGGTGTTCATTGTAGT+TGG | + | chr8_1:33698763-33698782 | Msa1190590:CDS | 40.0% |
| GGTGTTCATTGTAGTTGGAT+TGG | + | chr8_1:33698768-33698787 | Msa1190590:CDS | 40.0% | |
| !! | TGGATTGGTGTTAATAGTGG+TGG | + | chr8_1:33698783-33698802 | Msa1190590:CDS | 40.0% |
| !! | ATTGGTGTTAATAGTGGTGG+TGG | + | chr8_1:33698786-33698805 | Msa1190590:CDS | 40.0% |
| !! | ATGAGGTTGGTATCATACGT+GGG | + | chr8_1:33698823-33698842 | Msa1190590:CDS | 40.0% |
| ! | ATACGTGGGTTGTTTGAGAT+TGG | + | chr8_1:33698837-33698856 | Msa1190590:CDS | 40.0% |
| ! | TACGTGGGTTGTTTGAGATT+GGG | + | chr8_1:33698838-33698857 | Msa1190590:CDS | 40.0% |
| TGAGATTGGGACTAGGAAAT+TGG | + | chr8_1:33698851-33698870 | Msa1190590:CDS | 40.0% | |
| GAGATTGGGACTAGGAAATT+GGG | + | chr8_1:33698852-33698871 | Msa1190590:CDS | 40.0% | |
| ! | AACCACGAAACCCCAATTTT+GGG | - | chr8_1:33698945-33698964 | None:intergenic | 40.0% |
| ! | AAACCACGAAACCCCAATTT+TGG | - | chr8_1:33698946-33698965 | None:intergenic | 40.0% |
| GAGGATGTGAATTTACAAGG+TGG | + | chr8_1:33699095-33699114 | Msa1190590:CDS | 40.0% | |
| GATGTGAATTTACAAGGTGG+TGG | + | chr8_1:33699098-33699117 | Msa1190590:CDS | 40.0% | |
| !! | TGAATTTACAAGGTGGTGGA+AGG | + | chr8_1:33699102-33699121 | Msa1190590:CDS | 40.0% |
| TTGTGGAATGTGTGTTCAGA+TGG | + | chr8_1:33699134-33699153 | Msa1190590:CDS | 40.0% | |
| GAATGTGTGTTCAGATGGAA+CGG | + | chr8_1:33699139-33699158 | Msa1190590:CDS | 40.0% | |
| TAGGTCATGTCTCTCTGATT+CGG | + | chr8_1:33699211-33699230 | Msa1190590:CDS | 40.0% | |
| !!! | GGTTTTAGGGGAATGTATGA+AGG | + | chr8_1:33699247-33699266 | Msa1190590:CDS | 40.0% |
| GAATGTATGAAGGGAGATTC+AGG | + | chr8_1:33699257-33699276 | Msa1190590:CDS | 40.0% | |
| ! | AGGTGAGTTTTTCGCTGATA+GGG | + | chr8_1:33699277-33699296 | Msa1190590:CDS | 40.0% |
| GAGTTGCTAGCAACTGAATT+TGG | + | chr8_1:33699305-33699324 | Msa1190590:CDS | 40.0% | |
| ACTCAACAACATCTCCCAAA+CGG | - | chr8_1:33699357-33699376 | None:intergenic | 40.0% | |
| !! | GGCTCTTTTATCTGTTTTGG+AGG | + | chr8_1:33699475-33699494 | Msa1190590:CDS | 40.0% |
| TCACAAGAACATGGATTTGG+TGG | + | chr8_1:33699580-33699599 | Msa1190590:CDS | 40.0% | |
| ATGTACTTCGAAACCTCACA+TGG | + | chr8_1:33699663-33699682 | Msa1190590:CDS | 40.0% | |
| ! | ATGGAGCTCCTTTTGTGATT+TGG | + | chr8_1:33699682-33699701 | Msa1190590:CDS | 40.0% |
| ! | ATTTGAGATGGATCTGCATG+AGG | + | chr8_1:33699715-33699734 | Msa1190590:CDS | 40.0% |
| ! | ACTAGCTGTTCACCATTTTG+AGG | - | chr8_1:33699902-33699921 | None:intergenic | 40.0% |
| TCTTTCGAACAGGATTCAAC+AGG | + | chr8_1:33700012-33700031 | Msa1190590:CDS | 40.0% | |
| CTTTCGAACAGGATTCAACA+GGG | + | chr8_1:33700013-33700032 | Msa1190590:CDS | 40.0% | |
| !! | GCTATGTCAGAAGGTTGATA+GGG | + | chr8_1:33700102-33700121 | Msa1190590:CDS | 40.0% |
| AGAACTGTTAAAGGATCCCA+AGG | + | chr8_1:33700207-33700226 | Msa1190590:CDS | 40.0% | |
| TGTGAAACCTGCGAAATTTC+AGG | + | chr8_1:33700949-33700968 | Msa1190590:intron | 40.0% | |
| GAGAATACCTGAAATTTCGC+AGG | - | chr8_1:33700959-33700978 | None:intergenic | 40.0% | |
| GGTGAAAATGATGTCGGTAA+TGG | + | chr8_1:33701122-33701141 | Msa1190590:CDS | 40.0% | |
| !! | GGCTTGTTTTCTGCTGAAAA+AGG | - | chr8_1:33701149-33701168 | None:intergenic | 40.0% |
| ! | CTTGTTCGGTCTTTCCTTTT+TGG | - | chr8_1:33701335-33701354 | None:intergenic | 40.0% |
| CAAAAAGGAAAGACCGAACA+AGG | + | chr8_1:33701333-33701352 | Msa1190590:CDS | 40.0% | |
| TGTCATAACATGCCCTTGTT+CGG | - | chr8_1:33701349-33701368 | None:intergenic | 40.0% | |
| ! | TCATCTGAACCTATTGACTG+CGG | - | chr8_1:33701464-33701483 | None:intergenic | 40.0% |
| ACCACAATTACATGGCTGAT+GGG | + | chr8_1:33701483-33701502 | Msa1190590:CDS | 40.0% | |
| AGTATGTGGTTCAGTTGCTA+AGG | + | chr8_1:33701511-33701530 | Msa1190590:CDS | 40.0% | |
| !! | AGTTGCTAAGGCATTGTTTC+AGG | + | chr8_1:33701523-33701542 | Msa1190590:CDS | 40.0% |
| GTGTGGGAGTAACGTATCAT+TGG | - | chr8_1:33698192-33698211 | None:intergenic | 45.0% | |
| AAGAACGATGCGGTTTGTGT+GGG | - | chr8_1:33698208-33698227 | None:intergenic | 45.0% | |
| GCGAAAAGAGAGGTTGAAAG+TGG | - | chr8_1:33698327-33698346 | None:intergenic | 45.0% | |
| AGTGGAGAAAGGATGATCGA+AGG | - | chr8_1:33698430-33698449 | None:intergenic | 45.0% | |
| GGAAATTGGGAAAGGTGGAT+AGG | - | chr8_1:33698473-33698492 | None:intergenic | 45.0% | |
| AAGAGGGAAATTGGGAAAGG+TGG | - | chr8_1:33698478-33698497 | None:intergenic | 45.0% | |
| ! | GCTTTCGGGTGATATGAAAG+AGG | - | chr8_1:33698495-33698514 | None:intergenic | 45.0% |
| TCGATGAGATTTGCGGCTTT+CGG | - | chr8_1:33698510-33698529 | None:intergenic | 45.0% | |
| GAGGGAATCGATGAGATTTG+CGG | - | chr8_1:33698517-33698536 | None:intergenic | 45.0% | |
| AGCTTCTTCATGATTACCCC+TGG | + | chr8_1:33698541-33698560 | Msa1190590:CDS | 45.0% | |
| GCTTCTTCATGATTACCCCT+GGG | + | chr8_1:33698542-33698561 | Msa1190590:CDS | 45.0% | |
| !!! | AGGTTTTTTCGATTCCGGTG+AGG | + | chr8_1:33698665-33698684 | Msa1190590:CDS | 45.0% |
| AATTCGCAACGAATCCTCAC+CGG | - | chr8_1:33698682-33698701 | None:intergenic | 45.0% | |
| !! | TTTTTGGGAATGTCAGTCGG+AGG | + | chr8_1:33698733-33698752 | Msa1190590:CDS | 45.0% |
| AGTCGGAGGTTTAGGTCTAA+GGG | + | chr8_1:33698747-33698766 | Msa1190590:CDS | 45.0% | |
| ! | TGGTGGTGATGATAAGGATG+AGG | + | chr8_1:33698806-33698825 | Msa1190590:CDS | 45.0% |
| GGTGATGATAAGGATGAGGT+TGG | + | chr8_1:33698810-33698829 | Msa1190590:CDS | 45.0% | |
| !! | GATGAGGTTGGTATCATACG+TGG | + | chr8_1:33698822-33698841 | Msa1190590:CDS | 45.0% |
| ! | GGTTGTTTGAGATTGGGACT+AGG | + | chr8_1:33698844-33698863 | Msa1190590:CDS | 45.0% |
| TTGGGACTAGGAAATTGGGT+TGG | + | chr8_1:33698856-33698875 | Msa1190590:CDS | 45.0% | |
| TGGGACTAGGAAATTGGGTT+GGG | + | chr8_1:33698857-33698876 | Msa1190590:CDS | 45.0% | |
| ! | GGGTTGGGGTTTTTGTTCTT+TGG | + | chr8_1:33698872-33698891 | Msa1190590:CDS | 45.0% |
| ! | GGTTCTGCTCTTGTTCCTTT+TGG | + | chr8_1:33698909-33698928 | Msa1190590:CDS | 45.0% |
| ATCCCAAAATTGGGGTTTCG+TGG | + | chr8_1:33698940-33698959 | Msa1190590:CDS | 45.0% | |
| GGGGAGGATGTGAATTTACA+AGG | + | chr8_1:33699092-33699111 | Msa1190590:CDS | 45.0% | |
| !! | TTTACAAGGTGGTGGAAGGA+AGG | + | chr8_1:33699106-33699125 | Msa1190590:CDS | 45.0% |
| !! | ATGTCTCTCTGATTCGGTTC+TGG | + | chr8_1:33699217-33699236 | Msa1190590:CDS | 45.0% |
| ! | TTCTGGTGCGTGAGGTTTTA+GGG | + | chr8_1:33699234-33699253 | Msa1190590:CDS | 45.0% |
| ! | CAGGTGAGTTTTTCGCTGAT+AGG | + | chr8_1:33699276-33699295 | Msa1190590:CDS | 45.0% |
| AGCAACTGAATTTGGCTGTC+AGG | + | chr8_1:33699313-33699332 | Msa1190590:CDS | 45.0% | |
| GCAACTGAATTTGGCTGTCA+GGG | + | chr8_1:33699314-33699333 | Msa1190590:CDS | 45.0% | |
| CAACTGAATTTGGCTGTCAG+GGG | + | chr8_1:33699315-33699334 | Msa1190590:CDS | 45.0% | |
| GCGAAAATCTGTTCCCGTTT+GGG | + | chr8_1:33699340-33699359 | Msa1190590:CDS | 45.0% | |
| CTCAACAACATCTCCCAAAC+GGG | - | chr8_1:33699356-33699375 | None:intergenic | 45.0% | |
| TAGAGAAGATTGCTGGGCTT+TGG | + | chr8_1:33699385-33699404 | Msa1190590:CDS | 45.0% | |
| !! | GTGTCGGTTGACAATGGTAA+AGG | + | chr8_1:33699407-33699426 | Msa1190590:CDS | 45.0% |
| TCGGTTGACAATGGTAAAGG+TGG | + | chr8_1:33699410-33699429 | Msa1190590:CDS | 45.0% | |
| GTTGACAATGGTAAAGGTGG+TGG | + | chr8_1:33699413-33699432 | Msa1190590:CDS | 45.0% | |
| !! | AAAGGTGGTGGATCTTGTGT+TGG | + | chr8_1:33699425-33699444 | Msa1190590:CDS | 45.0% |
| AGAGCCGAAGAAACGGTAAA+AGG | - | chr8_1:33699461-33699480 | None:intergenic | 45.0% | |
| !!! | TGTTTTGGAGGATCCACACT+CGG | + | chr8_1:33699487-33699506 | Msa1190590:CDS | 45.0% |
| !! | CATGGATTTGGTGGATTCTC+AGG | + | chr8_1:33699589-33699608 | Msa1190590:CDS | 45.0% |
| !! | TTTGGTGGATTCTCAGGTCA+AGG | + | chr8_1:33699595-33699614 | Msa1190590:CDS | 45.0% |
| !! | TTGGTGGATTCTCAGGTCAA+GGG | + | chr8_1:33699596-33699615 | Msa1190590:CDS | 45.0% |
| !! | AAGGGTGCTGTGGGAATTAA+GGG | + | chr8_1:33699614-33699633 | Msa1190590:CDS | 45.0% |
| GGGTGAGCAGAAAAAGATGA+CGG | + | chr8_1:33699634-33699653 | Msa1190590:CDS | 45.0% | |
| GCATGAGGTTTACTATGCGA+TGG | + | chr8_1:33699730-33699749 | Msa1190590:CDS | 45.0% | |
| GTCAGCTGGAATTAATGCTG+AGG | + | chr8_1:33699937-33699956 | Msa1190590:CDS | 45.0% | |
| TGCTGAGGTTGCAACGAAAA+AGG | + | chr8_1:33699952-33699971 | Msa1190590:CDS | 45.0% | |
| AGTCATAGACCTCGTAGCTT+TGG | + | chr8_1:33700048-33700067 | Msa1190590:CDS | 45.0% | |
| ! | GGCTATGTCAGAAGGTTGAT+AGG | + | chr8_1:33700101-33700120 | Msa1190590:CDS | 45.0% |
| GGAAACAATTCCTCAGATCC+AGG | + | chr8_1:33700123-33700142 | Msa1190590:CDS | 45.0% | |
| TGCTTTGCAGCTATGTCCTT+GGG | - | chr8_1:33700226-33700245 | None:intergenic | 45.0% | |
| ATGCTTTGCAGCTATGTCCT+TGG | - | chr8_1:33700227-33700246 | None:intergenic | 45.0% | |
| TTACAATCAGAGGTTGGACG+CGG | + | chr8_1:33700481-33700500 | Msa1190590:intron | 45.0% | |
| AGAGAACATTCAGTGCCACA+TGG | + | chr8_1:33700555-33700574 | Msa1190590:intron | 45.0% | |
| AACATTCAGTGCCACATGGA+AGG | + | chr8_1:33700559-33700578 | Msa1190590:intron | 45.0% | |
| ACATTCAGTGCCACATGGAA+GGG | + | chr8_1:33700560-33700579 | Msa1190590:intron | 45.0% | |
| TGTAAATGAGGATGAAGCCC+CGG | + | chr8_1:33701034-33701053 | Msa1190590:CDS | 45.0% | |
| AATGCCTGCATTGCGAGTTT+GGG | + | chr8_1:33701259-33701278 | Msa1190590:CDS | 45.0% | |
| CGCCAATGACAAGAAACACA+CGG | + | chr8_1:33701381-33701400 | Msa1190590:CDS | 45.0% | |
| GACCGTGTGTTTCTTGTCAT+TGG | - | chr8_1:33701386-33701405 | None:intergenic | 45.0% | |
| ! | CATCTGAACCTATTGACTGC+GGG | - | chr8_1:33701463-33701482 | None:intergenic | 45.0% |
| GACCACAATTACATGGCTGA+TGG | + | chr8_1:33701482-33701501 | Msa1190590:CDS | 45.0% | |
| TCCCATCAGCCATGTAATTG+TGG | - | chr8_1:33701487-33701506 | None:intergenic | 45.0% | |
| GCTGATGGGAATCAAGTATG+TGG | + | chr8_1:33701497-33701516 | Msa1190590:CDS | 45.0% | |
| GAAGAACGATGCGGTTTGTG+TGG | - | chr8_1:33698209-33698228 | None:intergenic | 50.0% | |
| TGTTGTGAAGGAGGAGGAGT+GGG | - | chr8_1:33698245-33698264 | None:intergenic | 50.0% | |
| !! | AGTTGGTGGTGGTGTTGTGA+AGG | - | chr8_1:33698257-33698276 | None:intergenic | 50.0% |
| !!! | AGGTGGATAGGGTTTTGGAG+AGG | - | chr8_1:33698461-33698480 | None:intergenic | 50.0% |
| ! | GGGAAAGGTGGATAGGGTTT+TGG | - | chr8_1:33698466-33698485 | None:intergenic | 50.0% |
| CGATGAGATTTGCGGCTTTC+GGG | - | chr8_1:33698509-33698528 | None:intergenic | 50.0% | |
| GGAATGTCAGTCGGAGGTTT+AGG | + | chr8_1:33698739-33698758 | Msa1190590:CDS | 50.0% | |
| CAGTCGGAGGTTTAGGTCTA+AGG | + | chr8_1:33698746-33698765 | Msa1190590:CDS | 50.0% | |
| !! | GGTGTTAATAGTGGTGGTGG+TGG | + | chr8_1:33698789-33698808 | Msa1190590:CDS | 50.0% |
| !! | TGGTGGTGGTGGTGATGATA+AGG | + | chr8_1:33698800-33698819 | Msa1190590:CDS | 50.0% |
| ! | GGGACTAGGAAATTGGGTTG+GGG | + | chr8_1:33698858-33698877 | Msa1190590:CDS | 50.0% |
| !!! | TAGGGTTTTTGGTAGAGGGG+AGG | + | chr8_1:33699076-33699095 | Msa1190590:CDS | 50.0% |
| ! | GTTCTGGTGCGTGAGGTTTT+AGG | + | chr8_1:33699233-33699252 | Msa1190590:CDS | 50.0% |
| !! | TCTGGTGCGTGAGGTTTTAG+GGG | + | chr8_1:33699235-33699254 | Msa1190590:CDS | 50.0% |
| GGCGAAAATCTGTTCCCGTT+TGG | + | chr8_1:33699339-33699358 | Msa1190590:CDS | 50.0% | |
| ! | AGATTGCTGGGCTTTGGTGT+CGG | + | chr8_1:33699391-33699410 | Msa1190590:CDS | 50.0% |
| !! | GCTTTGGTGTCGGTTGACAA+TGG | + | chr8_1:33699401-33699420 | Msa1190590:CDS | 50.0% |
| CCAAAATCAGAAGCCGAGTG+TGG | - | chr8_1:33699503-33699522 | None:intergenic | 50.0% | |
| ! | CCACACTCGGCTTCTGATTT+TGG | + | chr8_1:33699500-33699519 | Msa1190590:CDS | 50.0% |
| !! | CAAGGGTGCTGTGGGAATTA+AGG | + | chr8_1:33699613-33699632 | Msa1190590:CDS | 50.0% |
| CACAAAAGGAGCTCCATGTG+AGG | - | chr8_1:33699679-33699698 | None:intergenic | 50.0% | |
| CTTTCAGAGGAGAATGGACC+TGG | - | chr8_1:33700144-33700163 | None:intergenic | 50.0% | |
| TGCTGCATCAGATGTCTGAG+AGG | - | chr8_1:33700266-33700285 | None:intergenic | 50.0% | |
| TCTCAGACATCTGATGCAGC+AGG | + | chr8_1:33700265-33700284 | Msa1190590:CDS | 50.0% | |
| CATTCAGTGCCACATGGAAG+GGG | + | chr8_1:33700561-33700580 | Msa1190590:intron | 50.0% | |
| ATTCAGTGCCACATGGAAGG+GGG | + | chr8_1:33700562-33700581 | Msa1190590:intron | 50.0% | |
| ! | AAGGGGGGTTCTTTGGTGAT+TGG | + | chr8_1:33700578-33700597 | Msa1190590:intron | 50.0% |
| CGAGGACAGCAGCAAATCAT+TGG | + | chr8_1:33701073-33701092 | Msa1190590:CDS | 50.0% | |
| GAATGCCTGCATTGCGAGTT+TGG | + | chr8_1:33701258-33701277 | Msa1190590:CDS | 50.0% | |
| AGTTTGGGCCCCAAAACAGA+AGG | + | chr8_1:33701274-33701293 | Msa1190590:CDS | 50.0% | |
| GTTTGGGCCCCAAAACAGAA+GGG | + | chr8_1:33701275-33701294 | Msa1190590:CDS | 50.0% | |
| ! | CGCCAATGACAAGAAGCACA+CGG | + | chr8_1:33701432-33701451 | Msa1190590:CDS | 50.0% |
| GACCGTGTGCTTCTTGTCAT+TGG | - | chr8_1:33701437-33701456 | None:intergenic | 50.0% | |
| GTGTTGTGAAGGAGGAGGAG+TGG | - | chr8_1:33698246-33698265 | None:intergenic | 55.0% | |
| !! | TGGTGGTGTTGTGAAGGAGG+AGG | - | chr8_1:33698251-33698270 | None:intergenic | 55.0% |
| !! | TGGTGGTGGTGTTGTGAAGG+AGG | - | chr8_1:33698254-33698273 | None:intergenic | 55.0% |
| CGTCGGAATTAGGTTCCCAG+GGG | - | chr8_1:33698560-33698579 | None:intergenic | 55.0% | |
| GCGTCGGAATTAGGTTCCCA+GGG | - | chr8_1:33698561-33698580 | None:intergenic | 55.0% | |
| !! | TCAGTGTCGGCGTCGGAATT+AGG | - | chr8_1:33698570-33698589 | None:intergenic | 55.0% |
| !! | TGTGTTGTCAGTGTCGGCGT+CGG | - | chr8_1:33698577-33698596 | None:intergenic | 55.0% |
| !! | AAGGTGGTGGAAGGAAGGAG+AGG | + | chr8_1:33699111-33699130 | Msa1190590:CDS | 55.0% |
| GTGGAAGGAAGGAGAGGTTG+TGG | + | chr8_1:33699117-33699136 | Msa1190590:CDS | 55.0% | |
| !! | TGATTCGGTTCTGGTGCGTG+AGG | + | chr8_1:33699226-33699245 | Msa1190590:CDS | 55.0% |
| CTGAATTTGGCTGTCAGGGG+CGG | + | chr8_1:33699318-33699337 | Msa1190590:CDS | 55.0% | |
| !! | TTCTCAGGTCAAGGGTGCTG+TGG | + | chr8_1:33699604-33699623 | Msa1190590:CDS | 55.0% |
| !! | TCTCAGGTCAAGGGTGCTGT+GGG | + | chr8_1:33699605-33699624 | Msa1190590:CDS | 55.0% |
| TGGTGAACAGCTAGTCCCAC+AGG | + | chr8_1:33699907-33699926 | Msa1190590:CDS | 55.0% | |
| TGAACAGCTAGTCCCACAGG+TGG | + | chr8_1:33699910-33699929 | Msa1190590:CDS | 55.0% | |
| CAGCTGACACAACCACCTGT+GGG | - | chr8_1:33699925-33699944 | None:intergenic | 55.0% | |
| GGAGAATGGACCTGGATCTG+AGG | - | chr8_1:33700136-33700155 | None:intergenic | 55.0% | |
| TTCAGTGCCACATGGAAGGG+GGG | + | chr8_1:33700563-33700582 | Msa1190590:intron | 55.0% | |
| CAAAGAACCCCCCTTCCATG+TGG | - | chr8_1:33700573-33700592 | None:intergenic | 55.0% | |
| CACATGGAAGGGGGGTTCTT+TGG | + | chr8_1:33700571-33700590 | Msa1190590:intron | 55.0% | |
| ! | GGCGTCGGAATTAGGTTCCC+AGG | - | chr8_1:33698562-33698581 | None:intergenic | 60.0% |
| CCAGCTGACACAACCACCTG+TGG | - | chr8_1:33699926-33699945 | None:intergenic | 60.0% | |
| CCACAGGTGGTTGTGTCAGC+TGG | + | chr8_1:33699923-33699942 | Msa1190590:CDS | 60.0% | |
| GTCGCTCTGCCAAAGCTACG+AGG | - | chr8_1:33700060-33700079 | None:intergenic | 60.0% | |
| CGGTCAAGCCCGCAGTCAAT+AGG | + | chr8_1:33701452-33701471 | Msa1190590:CDS | 60.0% | |
| GGGGCCCAAACTCGCAATGC+AGG | - | chr8_1:33701266-33701285 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 33698162 | 33701550 | 33698162 | ID=Msa1190590;Name=Msa1190590 |
| chr8_1 | mRNA | 33698162 | 33701550 | 33698162 | ID=Msa1190590-mRNA-1;Parent=Msa1190590;Name=Msa1190590-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|2|0|913 |
| chr8_1 | exon | 33698162 | 33700323 | 33698162 | ID=Msa1190590-mRNA-1:exon:11336;Parent=Msa1190590-mRNA-1 |
| chr8_1 | exon | 33700971 | 33701550 | 33700971 | ID=Msa1190590-mRNA-1:exon:11337;Parent=Msa1190590-mRNA-1 |
| chr8_1 | CDS | 33698162 | 33700323 | 33698162 | ID=Msa1190590-mRNA-1:cds;Parent=Msa1190590-mRNA-1 |
| chr8_1 | CDS | 33700971 | 33701550 | 33700971 | ID=Msa1190590-mRNA-1:cds;Parent=Msa1190590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
