AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0122330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0122330 MtrunA17_Chr1g0182151 97.126 1044 30 0 1 1044 1 1044 0.0 2097
Msa0122330 MtrunA17_Chr2g0327581 48.105 1029 517 8 8 1030 4 1021 0.0 934
Msa0122330 MtrunA17_Chr7g0266631 42.019 971 549 8 48 1009 3 968 0.0 721
Msa0122330 MtrunA17_Chr1g0178411 40.275 1018 571 6 49 1044 8 1010 0.0 697
Msa0122330 MtrunA17_Chr3g0132921 39.348 399 209 11 47 431 2 381 1.35e-73 253
Msa0122330 MtrunA17_Chr5g0427481 40.374 374 186 9 44 400 7 360 1.07e-68 251
Msa0122330 MtrunA17_Chr4g0069141 41.039 385 191 8 54 424 153 515 2.20e-68 251
Msa0122330 MtrunA17_Chr4g0053211 38.501 387 184 11 54 405 12 379 8.21e-68 247
Msa0122330 MtrunA17_Chr3g0134191 38.010 392 191 10 55 414 9 380 3.06e-66 242
Msa0122330 MtrunA17_Chr1g0153061 35.782 422 228 10 55 448 9 415 4.38e-66 241
Msa0122330 MtrunA17_Chr2g0322291 39.394 396 210 7 51 435 85 461 5.60e-65 240
Msa0122330 MtrunA17_Chr1g0191851 37.799 418 226 13 54 464 147 537 5.86e-65 234
Msa0122330 MtrunA17_Chr1g0193221 36.951 387 204 6 55 431 4 360 6.46e-64 236
Msa0122330 MtrunA17_Chr4g0045381 39.691 388 198 8 54 427 193 558 1.01e-63 237
Msa0122330 MtrunA17_Chr7g0272871 37.740 416 229 12 54 464 127 517 1.02e-63 230
Msa0122330 MtrunA17_Chr2g0312631 34.658 453 237 13 54 484 384 799 1.37e-63 234
Msa0122330 MtrunA17_Chr1g0152231 40.000 340 175 5 101 430 46 366 5.30e-63 229
Msa0122330 MtrunA17_Chr3g0122121 37.186 398 204 9 52 426 96 470 5.47e-62 231
Msa0122330 MtrunA17_Chr5g0421591 37.853 354 195 7 54 405 374 704 7.18e-62 228
Msa0122330 MtrunA17_Chr1g0192481 37.563 394 217 12 49 437 53 422 1.63e-61 220
Msa0122330 MtrunA17_Chr5g0411971 32.000 550 311 13 54 590 399 898 2.23e-61 228
Msa0122330 MtrunA17_Chr5g0421521 37.853 354 195 7 54 405 374 704 3.81e-61 226
Msa0122330 MtrunA17_Chr7g0258991 37.565 386 207 10 47 427 66 422 2.39e-60 224
Msa0122330 MtrunA17_Chr2g0319271 39.255 349 192 9 54 393 399 736 1.02e-59 219
Msa0122330 MtrunA17_Chr2g0307481 37.778 360 187 8 52 400 66 399 2.97e-59 215
Msa0122330 MtrunA17_Chr8g0377731 36.256 422 217 12 30 424 26 422 2.57e-58 219
Msa0122330 MtrunA17_Chr3g0102921 40.669 359 190 9 49 397 433 778 7.07e-58 217
Msa0122330 MtrunA17_Chr4g0042061 39.655 348 193 8 54 394 432 769 7.93e-58 214
Msa0122330 MtrunA17_Chr3g0145071 35.013 397 214 10 54 441 99 460 8.01e-58 217
Msa0122330 MtrunA17_Chr5g0398521 31.794 563 301 18 21 532 28 558 1.27e-57 215
Msa0122330 MtrunA17_Chr4g0062291 36.592 358 195 7 53 400 122 457 3.22e-57 211
Msa0122330 MtrunA17_Chr7g0271961 38.310 355 186 10 49 397 396 723 1.41e-56 213
Msa0122330 MtrunA17_Chr4g0035661 33.663 404 224 10 47 441 82 450 3.17e-56 212
Msa0122330 MtrunA17_Chr7g0245931 34.515 423 230 11 25 423 21 420 7.65e-56 209
Msa0122330 MtrunA17_Chr8g0369881 34.146 410 232 11 50 455 871 1246 1.11e-55 211
Msa0122330 MtrunA17_Chr5g0407791 35.052 388 216 10 50 435 885 1238 1.77e-55 210
Msa0122330 MtrunA17_Chr6g0483701 32.886 447 249 12 40 475 14 420 7.65e-55 207
Msa0122330 MtrunA17_Chr1g0195111 36.723 354 198 8 49 397 391 723 1.32e-54 206
Msa0122330 MtrunA17_Chr3g0142261 33.850 387 220 8 51 429 16 374 1.40e-54 208
Msa0122330 MtrunA17_Chr4g0049011 37.500 352 202 8 54 398 279 619 1.41e-54 201
Msa0122330 MtrunA17_Chr2g0280421 38.261 345 189 10 54 393 437 762 2.61e-53 200
Msa0122330 MtrunA17_Chr5g0405181 34.015 391 217 9 49 428 15 375 4.16e-53 201
Msa0122330 MtrunA17_Chr1g0191181 35.917 387 207 11 50 425 84 440 2.14e-52 195
Msa0122330 MtrunA17_Chr8g0372171 32.990 388 223 7 52 430 17 376 5.36e-52 199
Msa0122330 MtrunA17_Chr4g0036001 31.718 454 274 10 52 498 22 446 7.16e-52 197
Msa0122330 MtrunA17_Chr5g0447041 37.143 385 194 11 50 397 430 803 2.42e-51 197
Msa0122330 MtrunA17_Chr7g0257301 34.409 372 206 8 49 397 387 743 2.51e-50 193
Msa0122330 MtrunA17_Chr7g0238581 32.295 353 206 8 55 399 26 353 6.40e-50 187
Msa0122330 MtrunA17_Chr4g0070001 33.889 360 207 6 48 404 137 468 1.04e-48 188
Msa0122330 MtrunA17_Chr2g0331761 35.083 362 194 11 48 397 176 508 4.42e-47 180
Msa0122330 MtrunA17_Chr5g0445211 31.667 420 221 10 50 437 70 455 1.26e-46 182
Msa0122330 MtrunA17_Chr6g0485471 34.454 357 186 9 55 397 116 438 9.97e-46 176
Msa0122330 MtrunA17_Chr3g0101021 29.663 445 259 14 101 513 108 530 1.15e-44 176
Msa0122330 MtrunA17_Chr2g0295881 33.422 377 201 10 44 397 184 533 1.45e-42 168
Msa0122330 MtrunA17_Chr4g0067421 32.533 375 205 10 44 397 192 539 4.84e-41 163
Msa0122330 MtrunA17_Chr8g0367581 32.676 355 186 11 54 396 146 459 1.89e-39 159
Msa0122330 MtrunA17_Chr8g0386891 47.771 157 79 2 241 397 3 156 3.87e-32 130
Msa0122330 MtrunA17_Chr1g0187411 31.217 378 211 13 47 401 121 472 8.01e-32 134
Msa0122330 MtrunA17_Chr7g0269681 43.605 172 88 2 241 406 40 208 1.69e-29 124
Msa0122330 MtrunA17_Chr6g0470541 27.035 344 215 11 55 394 6 317 9.31e-28 121
Msa0122330 MtrunA17_Chr6g0484501 46.795 156 80 1 242 397 34 186 9.27e-25 104
Msa0122330 MtrunA17_Chr8g0390981 37.654 162 90 5 54 212 515 668 1.48e-23 107
Msa0122330 MtrunA17_Chr8g0390991 43.299 194 94 4 242 424 4 192 2.85e-23 105
Msa0122330 MtrunA17_Chr3g0142841 27.835 291 167 8 96 373 138 398 7.93e-23 105
Msa0122330 MtrunA17_Chr6g0484511 36.970 165 81 6 54 209 289 439 5.62e-22 100
Msa0122330 MtrunA17_Chr8g0386901 33.516 182 108 7 49 225 478 651 3.02e-20 96.7
Msa0122330 MtrunA17_Chr7g0269691 33.728 169 96 6 49 212 395 552 1.50e-19 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0122330 AT2G37420.1 59.330 1045 414 6 3 1044 2 1038 0.0 1219
Msa0122330 AT2G37420.2 59.330 1045 414 6 3 1044 2 1038 0.0 1219
Msa0122330 AT3G45850.2 48.400 1000 510 6 18 1014 18 1014 0.0 915
Msa0122330 AT3G45850.1 48.400 1000 510 6 18 1014 18 1014 0.0 915
Msa0122330 AT2G28620.3 45.374 1016 543 6 4 1014 1 1009 0.0 879
Msa0122330 AT2G28620.2 45.374 1016 543 6 4 1014 1 1009 0.0 879
Msa0122330 AT2G28620.1 45.374 1016 543 6 4 1014 1 1009 0.0 878
Msa0122330 AT2G36200.1 40.533 1014 576 8 48 1044 6 1009 0.0 724
Msa0122330 AT2G36200.2 39.330 1045 576 9 48 1044 6 1040 0.0 707
Msa0122330 AT2G22610.3 35.091 493 258 14 54 536 418 858 3.17e-68 249
Msa0122330 AT2G22610.1 35.091 493 258 14 54 536 417 857 3.62e-68 249
Msa0122330 AT2G22610.2 35.091 493 258 14 54 536 417 857 5.06e-68 248
Msa0122330 AT3G17360.3 41.111 450 210 18 5 424 106 530 7.60e-68 250
Msa0122330 AT5G47820.2 39.031 392 193 11 54 414 11 387 7.74e-68 247
Msa0122330 AT5G47820.1 39.031 392 193 11 54 414 11 387 7.74e-68 247
Msa0122330 AT3G17360.2 41.111 450 210 18 5 424 106 530 7.74e-68 250
Msa0122330 AT3G17360.1 41.111 450 210 18 5 424 106 530 8.22e-68 250
Msa0122330 AT5G60930.2 38.049 410 210 11 55 437 7 399 1.48e-66 245
Msa0122330 AT5G60930.3 40.385 364 183 9 100 437 44 399 1.68e-66 245
Msa0122330 AT5G60930.1 38.049 410 210 11 55 437 7 399 1.92e-66 245
Msa0122330 AT3G50240.2 36.818 440 217 14 55 457 26 441 3.41e-66 241
Msa0122330 AT3G50240.4 36.818 440 217 14 55 457 26 441 7.54e-66 241
Msa0122330 AT3G50240.1 36.818 440 217 14 55 457 26 441 8.50e-66 241
Msa0122330 AT3G44050.1 39.851 404 199 10 51 436 90 467 1.01e-65 243
Msa0122330 AT1G59540.1 40.798 326 170 5 103 424 46 352 1.20e-64 235
Msa0122330 AT3G23670.2 38.442 398 196 10 52 426 94 465 1.29e-64 237
Msa0122330 AT3G12020.4 37.468 395 205 12 42 427 57 418 1.91e-64 236
Msa0122330 AT3G12020.1 37.468 395 205 12 42 427 57 418 1.91e-64 236
Msa0122330 AT3G12020.3 37.468 395 205 12 42 427 57 418 4.58e-64 236
Msa0122330 AT3G12020.2 37.468 395 205 12 42 427 57 418 4.58e-64 236
Msa0122330 AT3G23670.1 38.155 401 193 10 52 426 94 465 4.67e-64 238
Msa0122330 AT3G19050.1 41.645 377 178 10 54 412 193 545 1.27e-63 237
Msa0122330 AT1G72250.4 35.045 448 257 11 54 491 511 934 2.32e-63 235
Msa0122330 AT1G72250.1 35.778 450 251 12 54 491 491 914 2.33e-63 235
Msa0122330 AT4G14150.1 37.164 409 208 10 52 437 89 471 2.36e-63 235
Msa0122330 AT1G72250.3 35.778 450 251 12 54 491 512 935 2.39e-63 235
Msa0122330 AT1G72250.2 35.045 448 257 11 54 491 500 923 2.52e-63 235
Msa0122330 AT3G10180.2 35.751 386 209 7 55 430 4 360 2.72e-62 232
Msa0122330 AT3G10180.1 35.751 386 209 7 55 430 4 360 2.98e-62 232
Msa0122330 AT5G06670.5 36.412 379 207 10 54 427 66 415 1.36e-61 224
Msa0122330 AT5G06670.8 36.412 379 207 10 54 427 66 415 1.53e-61 224
Msa0122330 AT5G06670.4 36.412 379 207 10 54 427 66 415 1.53e-61 224
Msa0122330 AT5G06670.7 36.412 379 207 10 54 427 66 415 1.53e-61 224
Msa0122330 AT4G39050.1 35.242 454 237 15 3 443 52 461 1.54e-61 229
Msa0122330 AT1G18550.1 37.746 355 190 6 53 398 150 482 5.12e-61 223
Msa0122330 AT5G27550.2 38.028 355 195 8 54 405 132 464 7.63e-61 223
Msa0122330 AT5G27550.1 38.028 355 195 8 54 405 132 464 7.63e-61 223
Msa0122330 AT5G06670.2 36.412 379 207 10 54 427 66 415 8.45e-61 226
Msa0122330 AT5G06670.3 36.412 379 207 10 54 427 66 415 8.45e-61 226
Msa0122330 AT2G21380.2 36.250 400 209 13 54 443 104 467 8.25e-60 223
Msa0122330 AT2G21380.1 36.250 400 209 13 54 443 104 467 8.25e-60 223
Msa0122330 AT1G21730.1 36.104 385 214 9 54 434 75 431 1.81e-59 221
Msa0122330 AT1G73860.2 36.675 379 214 9 54 427 426 783 4.28e-59 220
Msa0122330 AT1G73860.1 36.675 379 214 9 54 427 509 866 8.36e-59 220
Msa0122330 AT5G06670.6 35.567 388 207 11 54 427 66 424 2.17e-58 218
Msa0122330 AT5G06670.1 35.567 388 207 11 54 427 66 424 2.17e-58 218
Msa0122330 AT5G54670.3 37.791 344 200 6 54 393 336 669 5.68e-58 213
Msa0122330 AT1G55550.1 35.917 387 215 11 50 432 87 444 1.07e-57 215
Msa0122330 AT3G54870.3 33.913 460 234 13 101 520 150 579 1.53e-57 215
Msa0122330 AT3G44730.1 38.601 386 200 10 49 424 372 730 1.97e-57 216
Msa0122330 AT3G44730.4 38.601 386 200 10 49 424 372 730 1.97e-57 216
Msa0122330 AT5G54670.1 37.791 344 200 6 54 393 396 729 2.34e-57 212
Msa0122330 AT5G54670.2 37.791 344 200 6 54 393 396 729 2.34e-57 212
Msa0122330 AT3G44730.2 38.601 386 200 10 49 424 417 775 2.45e-57 216
Msa0122330 AT3G44730.3 38.601 386 200 10 49 424 417 775 2.45e-57 216
Msa0122330 AT3G63480.2 38.172 372 191 12 53 410 2 348 3.16e-57 205
Msa0122330 AT1G18370.1 33.408 449 240 9 48 486 25 424 7.04e-57 214
Msa0122330 AT3G54870.1 37.830 341 179 8 101 427 150 471 1.68e-56 212
Msa0122330 AT5G65930.2 34.491 403 234 10 50 449 884 1259 1.77e-56 214
Msa0122330 AT5G65930.3 34.491 403 234 10 50 449 890 1265 1.82e-56 214
Msa0122330 AT5G65930.1 34.491 403 234 10 50 449 883 1258 2.18e-56 214
Msa0122330 AT5G27000.1 34.404 436 248 13 49 471 389 799 2.73e-56 212
Msa0122330 AT5G66310.2 31.963 438 265 9 55 485 19 430 3.03e-56 212
Msa0122330 AT5G66310.3 31.963 438 265 9 55 485 19 430 3.03e-56 212
Msa0122330 AT5G66310.1 31.963 438 265 9 55 485 19 430 3.03e-56 212
Msa0122330 AT3G54870.2 37.830 341 179 8 101 427 150 471 3.44e-56 212
Msa0122330 AT3G63480.1 37.766 376 191 14 53 410 2 352 3.81e-56 202
Msa0122330 AT4G27180.1 37.391 345 200 6 54 393 387 720 5.43e-56 208
Msa0122330 AT4G27180.2 37.391 345 200 6 54 393 387 720 5.43e-56 208
Msa0122330 AT3G49650.1 36.585 369 192 8 51 404 11 352 1.40e-55 208
Msa0122330 AT3G51150.2 33.333 393 231 7 46 432 9 376 2.01e-55 210
Msa0122330 AT3G51150.4 33.333 393 231 7 46 432 9 376 2.01e-55 210
Msa0122330 AT3G51150.3 33.333 393 231 7 46 432 9 376 2.01e-55 210
Msa0122330 AT3G51150.1 33.333 393 231 7 46 432 9 376 2.12e-55 209
Msa0122330 AT1G01950.2 35.047 428 222 12 18 423 35 428 2.88e-55 208
Msa0122330 AT1G01950.1 35.047 428 222 12 18 423 35 428 3.00e-55 208
Msa0122330 AT1G18410.3 37.714 350 191 9 54 397 489 817 3.01e-55 209
Msa0122330 AT1G18410.2 37.714 350 191 9 54 397 489 817 3.01e-55 209
Msa0122330 AT1G01950.3 35.047 428 222 12 18 423 35 428 3.13e-55 208
Msa0122330 AT1G18410.4 37.714 350 191 9 54 397 632 960 7.18e-55 208
Msa0122330 AT3G10310.2 37.322 351 199 9 49 397 358 689 7.39e-55 207
Msa0122330 AT3G10310.1 37.322 351 199 9 49 397 358 689 7.61e-55 207
Msa0122330 AT4G05190.2 37.784 352 193 10 54 393 415 752 2.04e-54 204
Msa0122330 AT4G21270.1 38.352 352 191 11 54 393 431 768 2.24e-54 204
Msa0122330 AT1G18410.5 38.040 347 186 8 54 397 479 799 3.20e-54 206
Msa0122330 AT4G05190.1 37.784 352 193 10 54 393 428 765 3.29e-54 203
Msa0122330 AT1G12430.2 35.641 390 214 9 55 426 71 441 7.18e-54 204
Msa0122330 AT1G12430.1 35.641 390 214 9 55 426 71 441 7.73e-54 204
Msa0122330 AT1G18410.1 38.040 347 186 8 54 397 632 952 8.96e-54 205
Msa0122330 AT4G24170.1 33.596 381 222 6 52 428 4 357 2.75e-53 203
Msa0122330 AT4G24170.2 33.596 381 222 6 52 428 4 357 2.75e-53 203
Msa0122330 AT5G41310.1 35.190 395 204 11 54 436 422 776 4.93e-53 202
Msa0122330 AT3G50240.3 38.244 353 166 11 141 457 3 339 6.08e-53 201
Msa0122330 AT2G47500.1 40.461 304 156 9 99 397 441 724 2.04e-52 200
Msa0122330 AT2G47500.2 40.461 304 156 9 99 397 441 724 2.17e-52 199
Msa0122330 AT1G09170.4 35.574 357 197 8 49 397 429 760 2.19e-52 199
Msa0122330 AT1G09170.3 35.574 357 197 8 49 397 429 760 2.28e-52 198
Msa0122330 AT1G09170.7 35.574 357 197 8 49 397 429 760 2.28e-52 198
Msa0122330 AT1G09170.2 35.574 357 197 8 49 397 429 760 3.06e-52 199
Msa0122330 AT4G38950.3 34.726 383 219 7 51 428 10 366 3.43e-52 198
Msa0122330 AT4G38950.5 34.726 383 219 7 51 428 10 366 3.43e-52 198
Msa0122330 AT4G38950.4 34.726 383 219 7 51 428 10 366 3.43e-52 198
Msa0122330 AT4G38950.1 34.726 383 219 7 51 428 10 366 3.43e-52 198
Msa0122330 AT4G38950.2 34.726 383 219 7 51 428 10 366 3.43e-52 198
Msa0122330 AT1G09170.5 35.574 357 197 8 49 397 429 760 5.42e-52 199
Msa0122330 AT5G27950.1 35.876 354 201 8 50 399 75 406 5.91e-52 194
Msa0122330 AT2G21300.2 33.420 383 224 7 51 428 21 377 1.82e-51 196
Msa0122330 AT2G21300.4 33.420 383 224 7 51 428 21 377 1.82e-51 196
Msa0122330 AT2G21300.3 33.420 383 224 7 51 428 21 377 1.82e-51 196
Msa0122330 AT2G21300.1 33.420 383 224 7 51 428 21 377 1.82e-51 196
Msa0122330 AT2G21300.5 33.420 383 224 7 51 428 21 377 1.82e-51 196
Msa0122330 AT3G43210.3 33.259 448 262 7 32 469 6 426 2.45e-51 196
Msa0122330 AT3G43210.5 33.259 448 262 7 32 469 6 426 2.45e-51 196
Msa0122330 AT3G43210.2 33.259 448 262 7 32 469 6 426 2.45e-51 196
Msa0122330 AT3G43210.4 33.259 448 262 7 32 469 6 426 2.45e-51 196
Msa0122330 AT3G43210.1 33.259 448 262 7 32 469 6 426 2.45e-51 196
Msa0122330 AT1G59540.2 40.977 266 142 4 163 424 6 260 9.59e-50 189
Msa0122330 AT5G02370.1 33.058 363 204 8 53 407 19 350 1.44e-49 186
Msa0122330 AT3G16060.1 34.060 367 204 9 55 412 170 507 4.57e-49 186
Msa0122330 AT1G63640.3 34.916 358 190 10 54 397 472 800 1.21e-48 189
Msa0122330 AT1G63640.1 34.916 358 190 10 54 397 472 800 1.54e-48 188
Msa0122330 AT1G63640.4 34.916 358 190 10 54 397 472 800 1.54e-48 188
Msa0122330 AT1G63640.5 34.916 358 190 10 54 397 462 790 1.94e-48 188
Msa0122330 AT1G63640.2 34.637 358 184 11 54 397 472 793 5.51e-48 186
Msa0122330 AT1G09170.6 33.939 330 185 8 49 370 429 733 2.29e-44 173
Msa0122330 AT1G09170.8 33.939 330 185 8 49 370 429 733 2.29e-44 173
Msa0122330 AT1G09170.1 34.286 350 175 8 49 397 429 724 2.63e-42 168
Msa0122330 AT1G01950.4 37.459 307 152 8 137 423 1 287 3.64e-42 166
Msa0122330 AT5G65460.2 33.908 348 191 10 54 396 138 451 1.18e-41 166
Msa0122330 AT3G16630.2 34.146 369 195 12 50 397 185 526 1.50e-41 165
Msa0122330 AT3G16630.1 34.146 369 195 12 50 397 185 526 1.50e-41 165
Msa0122330 AT5G65460.6 33.908 348 191 10 54 396 138 451 1.63e-41 166
Msa0122330 AT5G65460.1 33.908 348 191 10 54 396 138 451 2.35e-41 166
Msa0122330 AT5G65460.4 33.908 348 191 10 54 396 138 451 2.57e-41 166
Msa0122330 AT5G65460.3 33.621 348 199 10 54 396 138 458 1.04e-39 160
Msa0122330 AT3G20150.2 27.389 471 287 11 54 498 104 545 8.84e-39 157
Msa0122330 AT3G20150.1 27.389 471 287 11 54 498 104 545 9.42e-39 157
Msa0122330 AT5G10470.1 31.006 358 188 9 54 396 142 455 9.33e-38 154
Msa0122330 AT5G10470.2 31.006 358 188 9 54 396 142 455 9.66e-38 154
Msa0122330 AT4G14330.1 29.851 469 272 18 41 498 32 454 1.51e-35 146
Msa0122330 AT5G27950.2 37.395 238 139 4 164 397 7 238 1.20e-34 139
Msa0122330 AT3G51150.5 37.019 208 128 2 228 432 16 223 3.90e-30 129
Msa0122330 AT5G42490.1 29.861 288 175 4 55 340 10 272 1.57e-27 121
Msa0122330 AT5G42490.2 29.861 288 175 4 55 340 10 272 1.59e-27 121
Msa0122330 AT5G23910.2 27.986 293 178 9 101 393 59 318 2.15e-21 100
Msa0122330 AT5G23910.1 27.986 293 178 9 101 393 55 314 2.29e-21 100
Msa0122330 AT5G65460.5 33.178 214 124 4 183 396 11 205 1.45e-19 95.5
Msa0122330 AT1G20060.10 26.897 290 165 8 103 374 165 425 2.73e-17 87.8
Msa0122330 AT1G20060.7 26.897 290 165 8 103 374 165 425 2.92e-17 87.8
Msa0122330 AT1G20060.4 26.897 290 165 8 103 374 165 425 2.93e-17 87.8
Msa0122330 AT1G20060.5 26.897 290 165 8 103 374 165 425 3.14e-17 87.8
Msa0122330 AT1G20060.9 26.897 290 165 8 103 374 165 425 3.15e-17 87.8
Msa0122330 AT1G20060.8 26.897 290 165 8 103 374 165 425 3.16e-17 87.8
Msa0122330 AT1G20060.6 26.897 290 165 8 103 374 165 425 3.25e-17 87.8
Msa0122330 AT1G20060.3 26.897 290 165 8 103 374 165 425 3.41e-17 87.8
Msa0122330 AT1G20060.2 26.897 290 165 8 103 374 165 425 3.61e-17 87.4

Find 203 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGTTCTTCATCGCTTAA+TGG 0.149663 1_3:-48905882 None:intergenic
AGAGCAAATTACAGCAATTT+TGG 0.150273 1_3:+48910549 Msa0122330:CDS
AACTGTACTGTCTTTGCTTA+TGG 0.185792 1_3:+48906197 Msa0122330:CDS
AAAATATTTGTTTCACAAAT+TGG 0.194436 1_3:-48910818 None:intergenic
ATGTATTTGCTAGCTCCTTC+AGG 0.233318 1_3:-48909817 None:intergenic
TGTCGTGTAATGAAAATAAA+AGG 0.235844 1_3:+48905925 Msa0122330:CDS
TACAACTTATTCTCCCTTTA+CGG 0.244438 1_3:-48912309 None:intergenic
GGCACTTTCCCACTGCTTCC+TGG 0.257257 1_3:-48911270 None:intergenic
ATGATCTTCAAGAGAATTAC+AGG 0.274538 1_3:+48908916 Msa0122330:CDS
GATTTGCATACAACCATTAT+AGG 0.274995 1_3:+48909561 Msa0122330:CDS
GTTGTAGTTAAATCAAATTC+TGG 0.277698 1_3:+48912326 Msa0122330:three_prime_UTR
CTGCTGCGGTCCACTTTAAT+CGG 0.279081 1_3:-48912090 None:intergenic
CAAGCTTAATCTTGTTGATT+TGG 0.283009 1_3:+48906885 Msa0122330:CDS
AATTGCTGTAATTTGCTCTA+AGG 0.284276 1_3:-48910545 None:intergenic
GAACCTTTGTAGAAAACTAT+TGG 0.289700 1_3:+48912348 Msa0122330:three_prime_UTR
ATTGATCTCTGTTGTGATTT+CGG 0.296531 1_3:-48906125 None:intergenic
CGTGAAAGCTTCATCTGATA+TGG 0.301727 1_3:+48909844 Msa0122330:CDS
ATTCTGCGCATGTACCTTAC+AGG 0.303011 1_3:+48907742 Msa0122330:CDS
TTGAACTTTCTAAGTACTTA+AGG 0.305508 1_3:+48912470 Msa0122330:three_prime_UTR
CTCCTCAATGGATGCATGGC+TGG 0.318433 1_3:-48912029 None:intergenic
TGAATCGGGACGACGGCGTT+CGG 0.323394 1_3:-48905689 None:intergenic
TTGTTGAGGATTCTAGAAAA+TGG 0.327395 1_3:-48912394 None:intergenic
TCTTTGTTATCCTGACGGTT+AGG 0.329799 1_3:-48905730 None:intergenic
CCTACTTTCTTAGACTGATC+TGG 0.346314 1_3:-48905619 None:intergenic
GAAGAAACCTGTAGCCCTTA+TGG 0.347923 1_3:+48906564 Msa0122330:CDS
AACTTTCTCTACTTGTTTGT+TGG 0.348646 1_3:-48905973 None:intergenic
TCATCTCAAAATTTGTCAAT+TGG 0.354938 1_3:-48910405 None:intergenic
CAATTTCCTTCTTGTTCTCA+TGG 0.355135 1_3:-48911680 None:intergenic
CAGTCTAAGAAAGTAGGGTT+AGG 0.355683 1_3:+48905625 Msa0122330:CDS
CTTAATCTTGTTGATTTGGC+TGG 0.358574 1_3:+48906889 Msa0122330:CDS
TTCTTCACTCTTTCTTCAAT+AGG 0.359638 1_3:-48906547 None:intergenic
TACATATTCATTAACTTCAT+TGG 0.360766 1_3:-48910781 None:intergenic
GAATCGGGACGACGGCGTTC+GGG 0.361733 1_3:-48905688 None:intergenic
GCAAGAACAGAAACTGGATT+TGG 0.371508 1_3:+48908761 Msa0122330:CDS
TACTTCCTCTTGTTGTTGAA+TGG 0.373061 1_3:-48910150 None:intergenic
CAAATACAGTGGACTGTTCC+AGG 0.380612 1_3:+48911252 Msa0122330:CDS
AAGATCATGCAATTCATTGC+TGG 0.381963 1_3:-48908901 None:intergenic
ATGACAGAAATTTATTCATC+AGG 0.390094 1_3:+48909785 Msa0122330:CDS
AACAGAGCAAGAACAGAAAC+TGG 0.390278 1_3:+48908755 Msa0122330:CDS
CTTTGTTATCCTGACGGTTA+GGG 0.391090 1_3:-48905729 None:intergenic
GGATTTGGAATGCGAGCTTA+AGG 0.393290 1_3:+48908776 Msa0122330:CDS
CATCTTGACAAACCATGCTT+TGG 0.394664 1_3:+48911458 Msa0122330:CDS
CCATCTTCCATAAGGGCTAC+AGG 0.404889 1_3:-48906571 None:intergenic
CCGATCAGAGCCTCGTGAAT+CGG 0.406849 1_3:-48905704 None:intergenic
TCCTCAATGGATGCATGGCT+GGG 0.409289 1_3:-48912028 None:intergenic
TAGTCCGTCTGCTTATTGTT+TGG 0.417215 1_3:+48907925 Msa0122330:CDS
GGAGGGTGGGATGAGAAATA+AGG 0.417417 1_3:+48906250 Msa0122330:CDS
GCTAGTTGTTTCAAAGTTGA+AGG 0.424996 1_3:+48908938 Msa0122330:CDS
TGATTTCAGTAGTTTAGAAA+TGG 0.426625 1_3:-48908973 None:intergenic
TGTGTCTGCGTCATTATCTA+TGG 0.427252 1_3:+48911491 Msa0122330:CDS
GGAAATTGTTGAAGGACAAC+TGG 0.428679 1_3:-48911292 None:intergenic
TCTCAAAATTTGTCAATTGG+TGG 0.430630 1_3:-48910402 None:intergenic
TTTGTTGAAGGACTTGTACT+TGG 0.431244 1_3:+48908123 Msa0122330:CDS
CACTCTTTCTTCAATAGGCC+TGG 0.432300 1_3:-48906542 None:intergenic
TTGCTCTACTAGCATAGTCT+AGG 0.434387 1_3:-48907964 None:intergenic
GTGCCTTGTTAATGATTACT+TGG 0.435453 1_3:+48911794 Msa0122330:CDS
GAAATTTATTCATCAGGAGT+TGG 0.440491 1_3:+48909791 Msa0122330:CDS
TGTATTTGCTAGCTCCTTCA+GGG 0.441154 1_3:-48909816 None:intergenic
AAATTTATTCATCAGGAGTT+GGG 0.441797 1_3:+48909792 Msa0122330:CDS
GAAAATATGTTGACTTGTTG+AGG 0.445016 1_3:-48912408 None:intergenic
TTCTGTGACGACACAATTGT+TGG 0.445299 1_3:+48911704 Msa0122330:CDS
CAGGGCCGTGCTAGAGAAGC+AGG 0.446800 1_3:+48907663 Msa0122330:intron
GTCTTTGCTTATGGACAGAC+TGG 0.447431 1_3:+48906206 Msa0122330:CDS
CGATCAGAGCCTCGTGAATC+GGG 0.450247 1_3:-48905703 None:intergenic
ATTTCTAAACTACTGAAATC+AGG 0.451671 1_3:+48908975 Msa0122330:CDS
CGAGAACTTCATTGACAATC+GGG 0.453285 1_3:-48906166 None:intergenic
CAAGCATGGTGGAAATATAT+CGG 0.453919 1_3:+48911749 Msa0122330:CDS
TTGAGAAATAGATCCTATAA+TGG 0.454865 1_3:-48909574 None:intergenic
TCGAGAACTTCATTGACAAT+CGG 0.458105 1_3:-48906167 None:intergenic
AAACGAAAACTCACCAATCC+TGG 0.458920 1_3:-48910878 None:intergenic
AAATGAAATTTATACTCTGT+TGG 0.460709 1_3:+48906645 Msa0122330:CDS
CTACTTTCTTAGACTGATCT+GGG 0.463811 1_3:-48905618 None:intergenic
AATCAATTAACATTTGCAAA+TGG 0.470130 1_3:-48912148 None:intergenic
TTCCTTTGCACGCTCAATCA+AGG 0.470672 1_3:-48909090 None:intergenic
CCTGTAGCCCTTATGGAAGA+TGG 0.471287 1_3:+48906571 Msa0122330:CDS
GTCGTGTAATGAAAATAAAA+GGG 0.472693 1_3:+48905926 Msa0122330:CDS
GGACGACGGCGTTCGGGTCG+AGG 0.473129 1_3:-48905682 None:intergenic
TCATTACACGACACCACCTT+CGG 0.475943 1_3:-48905915 None:intergenic
CGTGTTAATATGAACCTGTA+AGG 0.476601 1_3:-48907756 None:intergenic
AAAGGTAGTGTGTTGTTAAG+AGG 0.477663 1_3:+48906595 Msa0122330:CDS
TGACAATCGGGGCAATTGCT+TGG 0.479171 1_3:-48906154 None:intergenic
GGCCTGGTAGAACTGTCATC+TGG 0.482115 1_3:-48906526 None:intergenic
TTCTTGCAGATCACAAAGAA+AGG 0.483227 1_3:+48909475 Msa0122330:intron
ATACTTTCTGACTGAGGTTG+AGG 0.484486 1_3:-48908615 None:intergenic
TGTTTCAAAGTTGAAGGAGA+AGG 0.485762 1_3:+48908944 Msa0122330:CDS
CTTTATCTTTGTTATCCTGA+CGG 0.486717 1_3:-48905735 None:intergenic
AAAATTTGACGAACTGCTCT+CGG 0.492168 1_3:-48906415 None:intergenic
ACTTCCAGGTGCACTAATGA+TGG 0.493393 1_3:+48911656 Msa0122330:intron
ATTTCTCATCCCACCCTCCA+TGG 0.496182 1_3:-48906246 None:intergenic
CATTGCTTAACAAGAGAAGC+AGG 0.496816 1_3:+48906701 Msa0122330:CDS
GTTCTTGTGGAAATTGTTGA+AGG 0.497381 1_3:-48911300 None:intergenic
CCAGATCAGTCTAAGAAAGT+AGG 0.498378 1_3:+48905619 Msa0122330:CDS
TAGAGGATTGTCTCCAGGAT+TGG 0.501498 1_3:+48910865 Msa0122330:CDS
GGTGATTTAACTGCTGAGGC+TGG 0.508047 1_3:+48906385 Msa0122330:CDS
TATGTGAAAGAAACAGTAAT+TGG 0.508611 1_3:+48906838 Msa0122330:CDS
AACCATAAACAGGAAGAGGC+TGG 0.509268 1_3:+48910505 Msa0122330:intron
ATGTGTCCTCATCTCCTCAA+TGG 0.510059 1_3:-48912041 None:intergenic
AGGATATTACGAGATTCCTT+AGG 0.510487 1_3:+48907869 Msa0122330:CDS
TCATCTCCTCAATGGATGCA+TGG 0.512476 1_3:-48912033 None:intergenic
TCTCTGCAAGATTGTTCTTG+TGG 0.514439 1_3:-48911313 None:intergenic
AATTGTTGAAGAAACTCAAA+AGG 0.514692 1_3:+48910372 Msa0122330:CDS
GCTTATGGACAGACTGGGAC+TGG 0.517683 1_3:+48906212 Msa0122330:CDS
TCAGAGATAGTAAGCTTACA+AGG 0.521004 1_3:+48907849 Msa0122330:intron
AGAGGCTGGAAGAGATGAGG+AGG 0.521605 1_3:+48910519 Msa0122330:CDS
TTCTTTCACATAGACAGTAA+TGG 0.521841 1_3:-48906827 None:intergenic
AACTGATGAGCACCACTTGT+TGG 0.523245 1_3:+48912229 Msa0122330:three_prime_UTR
AGTCTAAGAAAGTAGGGTTA+GGG 0.523529 1_3:+48905626 Msa0122330:CDS
TGATCGGAACCCTAACCGTC+AGG 0.523617 1_3:+48905720 Msa0122330:CDS
GATGCTGTCAATCACATCAT+TGG 0.525717 1_3:-48910087 None:intergenic
TCAGAAAATATACTACGTTC+CGG 0.527487 1_3:+48906913 Msa0122330:CDS
GATGAAAGTGAATGAAGTGT+TGG 0.529056 1_3:-48905353 None:intergenic
ATATTACGAGATTCCTTAGG+AGG 0.529688 1_3:+48907872 Msa0122330:CDS
GCGCATTTATCACACGTCCC+AGG 0.530468 1_3:-48907710 None:intergenic
TTGATCGGAGAATCTGAGAA+AGG 0.531402 1_3:-48905470 None:intergenic
GCCCTTATGGAAGATGGAAA+AGG 0.531692 1_3:+48906577 Msa0122330:CDS
CAAGTGTGCAACAGTCTAAG+AGG 0.531813 1_3:+48910712 Msa0122330:CDS
ATGGATGCTGATTATGATGC+AGG 0.532675 1_3:+48911510 Msa0122330:CDS
TACAATAGAGGATTGTCTCC+AGG 0.533289 1_3:+48910860 Msa0122330:CDS
CAGATCAGTCTAAGAAAGTA+GGG 0.533619 1_3:+48905620 Msa0122330:CDS
TGCTCTACTAGCATAGTCTA+GGG 0.537773 1_3:-48907963 None:intergenic
CAGCTGTAAAGCTACAATAG+AGG 0.540704 1_3:+48910848 Msa0122330:CDS
CTCCAGATGACAGTTCTACC+AGG 0.544360 1_3:+48906524 Msa0122330:CDS
CCTCAATGGATGCATGGCTG+GGG 0.549533 1_3:-48912027 None:intergenic
CAGCACATGCTCTGGAAGCA+AGG 0.549984 1_3:+48909753 Msa0122330:CDS
TGCAGATCACAAAGAAAGGA+TGG 0.550426 1_3:+48909479 Msa0122330:intron
CCATGGAAAACCGATTAAAG+TGG 0.551916 1_3:+48912080 Msa0122330:CDS
TCTCCCCTGCTTCTCTAGCA+CGG 0.553152 1_3:-48907668 None:intergenic
GACTGGTAAAACTTATACCA+TGG 0.557386 1_3:+48906229 Msa0122330:CDS
TGCAGATGTACGAGCAGCGA+GGG 0.557824 1_3:+48908246 Msa0122330:intron
CGCATTTATCACACGTCCCA+GGG 0.559660 1_3:-48907709 None:intergenic
GAGATGAAAGGTTACTTGAT+CGG 0.560764 1_3:-48905485 None:intergenic
CAAAGAAGAAGCTGAAAAGA+AGG 0.562709 1_3:+48908306 Msa0122330:CDS
ACAGAAACAACTTAAATGCA+TGG 0.566060 1_3:+48909599 Msa0122330:CDS
TGCAGGAACACACAATCTGC+TGG 0.572017 1_3:+48911527 Msa0122330:CDS
GAAATTGAGAGAATGAAAGA+AGG 0.574967 1_3:+48908145 Msa0122330:CDS
CCGATTCACGAGGCTCTGAT+CGG 0.575179 1_3:+48905704 Msa0122330:CDS
AAGTATTATTTCAGCACGAG+TGG 0.575288 1_3:+48910288 Msa0122330:CDS
CCCCAGCCATGCATCCATTG+AGG 0.578382 1_3:+48912027 Msa0122330:CDS
TGATCGGAGAATCTGAGAAA+GGG 0.579783 1_3:-48905469 None:intergenic
TGGACTGTTCCAGGAAGCAG+TGG 0.580005 1_3:+48911261 Msa0122330:CDS
ATTCTCCATTCAACAACAAG+AGG 0.580683 1_3:+48910145 Msa0122330:CDS
AGAGGCGTCAAGGAATATGC+AGG 0.581642 1_3:+48910686 Msa0122330:CDS
AAATAAGAGCTTACTCACCC+TGG 0.581966 1_3:+48907692 Msa0122330:CDS
ACTACGTTCCGGAGCACGTG+AGG 0.582073 1_3:+48906924 Msa0122330:CDS
ATGAAAGTGAATGAAGTGTT+GGG 0.585514 1_3:-48905352 None:intergenic
TGCCTTGATTGAGCGTGCAA+AGG 0.586125 1_3:+48909088 Msa0122330:CDS
AACATCTAAGAGAACTGCTA+TGG 0.588510 1_3:+48910579 Msa0122330:CDS
TTTACAGTTTCTTGCCACTG+TGG 0.590640 1_3:+48910055 Msa0122330:intron
GGGCCGTGCTAGAGAAGCAG+GGG 0.592427 1_3:+48907665 Msa0122330:intron
AATAAGAGCTTACTCACCCT+GGG 0.592981 1_3:+48907693 Msa0122330:CDS
TTCAGCACGAGTGGTTTCAG+AGG 0.594099 1_3:+48910297 Msa0122330:CDS
TTTGCTCATCAAGAGAATTG+TGG 0.598391 1_3:-48910109 None:intergenic
ATGCATCCATTGAGGAGATG+AGG 0.601874 1_3:+48912035 Msa0122330:CDS
TATCACGGAAGAGAATTCCA+TGG 0.602918 1_3:+48912063 Msa0122330:CDS
TCGGAGAATCTGAGAAAGGG+TGG 0.606511 1_3:-48905466 None:intergenic
GCGTGCAAAGGAAATGTGTA+CGG 0.606609 1_3:+48909100 Msa0122330:CDS
ACGATCGAATGTTCCGAAGG+TGG 0.607596 1_3:+48905902 Msa0122330:CDS
AAAACTTATACCATGGAGGG+TGG 0.610055 1_3:+48906236 Msa0122330:CDS
ATTGTCAATGAAGTTCTCGA+TGG 0.610891 1_3:+48906170 Msa0122330:CDS
AGCCTCGTGAATCGGGACGA+CGG 0.613226 1_3:-48905696 None:intergenic
AAAACTCTACATATAAGCAC+AGG 0.613987 1_3:-48912186 None:intergenic
CGCCGTCGTCCCGATTCACG+AGG 0.616893 1_3:+48905694 Msa0122330:CDS
TTTAGGTCTCAGAGGCGTCA+AGG 0.617732 1_3:+48910676 Msa0122330:intron
ATGCGAGCTTAAGGATTGCA+AGG 0.618764 1_3:+48908785 Msa0122330:CDS
GGTAAAACTTATACCATGGA+GGG 0.619895 1_3:+48906233 Msa0122330:CDS
CGAGCAGCGAGGGAAAAGAA+TGG 0.620002 1_3:+48908256 Msa0122330:CDS
TATTACGAGATTCCTTAGGA+GGG 0.621917 1_3:+48907873 Msa0122330:CDS
GATGGACCATGAGAACAAGA+AGG 0.625243 1_3:+48911674 Msa0122330:CDS
GGAAGAGGCTGGAAGAGATG+AGG 0.629449 1_3:+48910516 Msa0122330:intron
GGGTGGTGATTTAACTGCTG+AGG 0.631701 1_3:+48906381 Msa0122330:intron
CGGAGAATCTGAGAAAGGGT+GGG 0.632190 1_3:-48905465 None:intergenic
AGGGCCGTGCTAGAGAAGCA+GGG 0.634214 1_3:+48907664 Msa0122330:intron
TCTTACATCACACCAACAAG+TGG 0.634379 1_3:-48912241 None:intergenic
ACGTGTGATAAATGCGCTCG+TGG 0.634469 1_3:+48907716 Msa0122330:CDS
TCTTCCAAACAATAAGCAGA+CGG 0.637285 1_3:-48907929 None:intergenic
GGAGATGAGGACACATATCA+CGG 0.638064 1_3:+48912048 Msa0122330:CDS
AAACTTATACCATGGAGGGT+GGG 0.638338 1_3:+48906237 Msa0122330:CDS
ATCAGGAGTTGGGACCCTGA+AGG 0.641988 1_3:+48909802 Msa0122330:CDS
CGGGGAATACTTTCTGACTG+AGG 0.646451 1_3:-48908621 None:intergenic
ATTTATACTCTGTTGGAACG+AGG 0.646893 1_3:+48906652 Msa0122330:CDS
CTTATTCTCCCTTTACGGAG+AGG 0.648622 1_3:-48912304 None:intergenic
AGAAACAGTAATTGGTGACG+AGG 0.649454 1_3:+48906846 Msa0122330:CDS
AGAATCTGAGAAAGGGTGGG+TGG 0.654238 1_3:-48905462 None:intergenic
AATCTGCTGGCAGATGTGAA+TGG 0.657716 1_3:+48911540 Msa0122330:CDS
GCTCTGTTAAGTAGAGCTCA+CGG 0.658800 1_3:-48908740 None:intergenic
ACAACGATCGAATGTTCCGA+AGG 0.660517 1_3:+48905899 Msa0122330:CDS
AGTTCATTACAAGACAAGCA+TGG 0.667182 1_3:+48911735 Msa0122330:CDS
GCAATGCAGTTCAAATACAG+TGG 0.670530 1_3:+48911241 Msa0122330:intron
GAAATTGTTGAAGGACAACT+GGG 0.671341 1_3:-48911291 None:intergenic
TGGTAAAACTTATACCATGG+AGG 0.671364 1_3:+48906232 Msa0122330:CDS
TCTTTGCTTATGGACAGACT+GGG 0.681979 1_3:+48906207 Msa0122330:CDS
GACGAGGAGTTGATTAAGTG+TGG 0.685123 1_3:+48906862 Msa0122330:CDS
GGACTGTTCCAGGAAGCAGT+GGG 0.685626 1_3:+48911262 Msa0122330:CDS
ATACCAAGTAATCATTAACA+AGG 0.690518 1_3:-48911797 None:intergenic
AAATATGCTTTAGGTCTCAG+AGG 0.692670 1_3:+48910668 Msa0122330:intron
AAATATAAAGAATAAGCCTG+AGG 0.698802 1_3:+48907988 Msa0122330:CDS
ATGCAGATGTACGAGCAGCG+AGG 0.713547 1_3:+48908245 Msa0122330:intron
AGATCACAAAGAAAGGATGG+AGG 0.714530 1_3:+48909482 Msa0122330:intron
TGGAACGAGGAGCATCAAAG+AGG 0.716495 1_3:+48906665 Msa0122330:CDS
GAGAACTTCATTGACAATCG+GGG 0.717733 1_3:-48906165 None:intergenic
TACTTTCTTAGACTGATCTG+GGG 0.719246 1_3:-48905617 None:intergenic
TCATTACAAGACAAGCATGG+TGG 0.719565 1_3:+48911738 Msa0122330:CDS
ATTGGCTTCAAGAACCACAG+TGG 0.777556 1_3:-48910069 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTTAAATAAGAAATTA+TGG - chr1_3:48908837-48908856 None:intergenic 10.0%
!!! ATTAAATATTTTGTTGTTAA+AGG - chr1_3:48911022-48911041 None:intergenic 10.0%
!! AAATAATAATTACGTGTATT+TGG + chr1_3:48907060-48907079 Msa0122330:intron 15.0%
!!! TTCAATACTTATGTATATTT+TGG - chr1_3:48907430-48907449 None:intergenic 15.0%
!!! AAAGCTAATATTTTTCTAAT+AGG + chr1_3:48908075-48908094 Msa0122330:intron 15.0%
!!! TTTTAAATAAGAAATTATGG+AGG - chr1_3:48908834-48908853 None:intergenic 15.0%
!! ATCAAATTAAATTACTCTTT+AGG + chr1_3:48908863-48908882 Msa0122330:intron 15.0%
!!! AAGCATATTTTCTTTTAAAA+GGG - chr1_3:48909314-48909333 None:intergenic 15.0%
!!! ACAAATAATTTTAGAATTCT+CGG - chr1_3:48909992-48910011 None:intergenic 15.0%
!! AAAATATTTGTTTCACAAAT+TGG - chr1_3:48910821-48910840 None:intergenic 15.0%
!!! AGAGATTTTTGATTTTGATT+CGG - chr1_3:48905440-48905459 None:intergenic 20.0%
!! AAAAAGAAAATAGAGATGAA+AGG - chr1_3:48905500-48905519 None:intergenic 20.0%
!! TTGCCGTTATTTATAAATAT+AGG + chr1_3:48906360-48906379 Msa0122330:intron 20.0%
!! TGCCGTTATTTATAAATATA+GGG + chr1_3:48906361-48906380 Msa0122330:intron 20.0%
!! CACCCTATATTTATAAATAA+CGG - chr1_3:48906366-48906385 None:intergenic 20.0%
!!! TCGTCAAATTTTTGATATTT+TGG + chr1_3:48906426-48906445 Msa0122330:CDS 20.0%
!! AAATGAAATTTATACTCTGT+TGG + chr1_3:48906645-48906664 Msa0122330:CDS 20.0%
!! GCCAAAAATTAATCAAAATT+GGG - chr1_3:48907257-48907276 None:intergenic 20.0%
!! TAAACATCTATAAGCTTATA+TGG - chr1_3:48907333-48907352 None:intergenic 20.0%
!!! ATAAAATGCTTGTTATAACT+TGG + chr1_3:48907536-48907555 Msa0122330:intron 20.0%
!! AGAACTTAAAATAAAAGTGA+AGG - chr1_3:48908173-48908192 None:intergenic 20.0%
!!! TTCACTTTTATTTTAAGTTC+TGG + chr1_3:48908172-48908191 Msa0122330:intron 20.0%
!! ATAAAACACAAATTAAGCTA+GGG - chr1_3:48908545-48908564 None:intergenic 20.0%
!!! AAATTTTTTGTCATCTAAGT+TGG + chr1_3:48909148-48909167 Msa0122330:CDS 20.0%
!!! AATTTTTTGTCATCTAAGTT+GGG + chr1_3:48909149-48909168 Msa0122330:CDS 20.0%
!!! GAAGCATATTTTCTTTTAAA+AGG - chr1_3:48909315-48909334 None:intergenic 20.0%
!! TTAAAAGAAAATATGCTTCA+TGG + chr1_3:48909316-48909335 Msa0122330:intron 20.0%
!! TAAAAGAAAATATGCTTCAT+GGG + chr1_3:48909317-48909336 Msa0122330:intron 20.0%
!! TAATGCAATAATATCTAGAA+AGG - chr1_3:48909422-48909441 None:intergenic 20.0%
!!! CAAAATTCACGATTATTTTT+TGG - chr1_3:48909515-48909534 None:intergenic 20.0%
!!! ATTTGAAACTACTTTTGTTT+GGG + chr1_3:48910179-48910198 Msa0122330:intron 20.0%
!!! ACTTATACATTGATTCTAAA+AGG + chr1_3:48910452-48910471 Msa0122330:intron 20.0%
!! TACATATTCATTAACTTCAT+TGG - chr1_3:48910784-48910803 None:intergenic 20.0%
!! AAAGAAAAAAATGAAGAAGA+CGG - chr1_3:48910917-48910936 None:intergenic 20.0%
!!! TTTTGTTGTTAAAGGAAAAA+TGG - chr1_3:48911014-48911033 None:intergenic 20.0%
!! ATTAAAAAAAATGTGTTCGA+AGG - chr1_3:48911048-48911067 None:intergenic 20.0%
!! GATTACAGTTAAAGAAATAT+TGG - chr1_3:48911420-48911439 None:intergenic 20.0%
!! AATCAATTAACATTTGCAAA+TGG - chr1_3:48912151-48912170 None:intergenic 20.0%
!!! ATATGTAGAGTTTTATTATG+AGG + chr1_3:48912195-48912214 Msa0122330:three_prime_UTR 20.0%
!!! TATGTAGAGTTTTATTATGA+GGG + chr1_3:48912196-48912215 Msa0122330:three_prime_UTR 20.0%
!!! GAGATTTTTGATTTTGATTC+GGG - chr1_3:48905439-48905458 None:intergenic 25.0%
! AAACAAAACCCTAATTAGTT+TGG - chr1_3:48905556-48905575 None:intergenic 25.0%
! TGTCGTGTAATGAAAATAAA+AGG + chr1_3:48905925-48905944 Msa0122330:CDS 25.0%
! GTCGTGTAATGAAAATAAAA+GGG + chr1_3:48905926-48905945 Msa0122330:CDS 25.0%
!!! GAAAGTTTTCAATTTTGACA+AGG + chr1_3:48905989-48906008 Msa0122330:CDS 25.0%
!!! CAATTGTTTTTGAATCTGTT+TGG + chr1_3:48906089-48906108 Msa0122330:intron 25.0%
! GTAACATAACATCATATAAC+CGG - chr1_3:48906319-48906338 None:intergenic 25.0%
! CGTTATTTATAAATATAGGG+TGG + chr1_3:48906364-48906383 Msa0122330:intron 25.0%
! TATGTGAAAGAAACAGTAAT+TGG + chr1_3:48906838-48906857 Msa0122330:CDS 25.0%
!!! TCTACTTTTGTTAATTTGCA+AGG + chr1_3:48906970-48906989 Msa0122330:intron 25.0%
!!! TGATATATCTGATTTGCTAT+TGG - chr1_3:48907011-48907030 None:intergenic 25.0%
!!! GCCCAATTTTGATTAATTTT+TGG + chr1_3:48907253-48907272 Msa0122330:intron 25.0%
! CGCCAAAAATTAATCAAAAT+TGG - chr1_3:48907258-48907277 None:intergenic 25.0%
! AAGCTTACAATATTTGCTTA+TGG + chr1_3:48907301-48907320 Msa0122330:intron 25.0%
! TAGATGTTTATGAAGTTACA+TGG + chr1_3:48907343-48907362 Msa0122330:intron 25.0%
! AGATGTTTATGAAGTTACAT+GGG + chr1_3:48907344-48907363 Msa0122330:intron 25.0%
! TAAAACTTCTTGTAAATAGC+AGG - chr1_3:48907474-48907493 None:intergenic 25.0%
! CGACTATAAGTGAATTTAAA+TGG + chr1_3:48907600-48907619 Msa0122330:intron 25.0%
! TTTGCAACAATATGATTACA+GGG + chr1_3:48907645-48907664 Msa0122330:intron 25.0%
! AAATATAAAGAATAAGCCTG+AGG + chr1_3:48907988-48908007 Msa0122330:CDS 25.0%
!! TGCTGTTATGACATTTTTAA+GGG - chr1_3:48908034-48908053 None:intergenic 25.0%
! GAACAAAGATATATGATTCA+AGG - chr1_3:48908212-48908231 None:intergenic 25.0%
! CAGATACTTAAAGCAAATAA+AGG - chr1_3:48908333-48908352 None:intergenic 25.0%
! ATAGAACATGCATCTAAATA+TGG - chr1_3:48908498-48908517 None:intergenic 25.0%
! GATAAAACACAAATTAAGCT+AGG - chr1_3:48908546-48908565 None:intergenic 25.0%
! TGATTTCAGTAGTTTAGAAA+TGG - chr1_3:48908976-48908995 None:intergenic 25.0%
! ATTTCTAAACTACTGAAATC+AGG + chr1_3:48908975-48908994 Msa0122330:CDS 25.0%
! AAGAACAAAGAACATATTGA+TGG - chr1_3:48909199-48909218 None:intergenic 25.0%
! TATGTTCTTTGTTCTTGATA+TGG + chr1_3:48909203-48909222 Msa0122330:intron 25.0%
! GGAACAAAGAACATAAAAAA+GGG - chr1_3:48909281-48909300 None:intergenic 25.0%
! AGGAACAAAGAACATAAAAA+AGG - chr1_3:48909282-48909301 None:intergenic 25.0%
!!! GCGTTAATTGTTTTAGAAAT+TGG + chr1_3:48909373-48909392 Msa0122330:intron 25.0%
! TCTAGAAAGGAAATGAATAA+GGG - chr1_3:48909409-48909428 None:intergenic 25.0%
! ATCTAGAAAGGAAATGAATA+AGG - chr1_3:48909410-48909429 None:intergenic 25.0%
! TTGAGAAATAGATCCTATAA+TGG - chr1_3:48909577-48909596 None:intergenic 25.0%
!!! TTTTCTTACATCACTTTTAC+TGG - chr1_3:48909649-48909668 None:intergenic 25.0%
! TGCAAAAATCAAATGATGAA+CGG - chr1_3:48909715-48909734 None:intergenic 25.0%
!!! TTGCATGACAATATTTTTTC+AGG + chr1_3:48909730-48909749 Msa0122330:intron 25.0%
! ATGACAGAAATTTATTCATC+AGG + chr1_3:48909785-48909804 Msa0122330:CDS 25.0%
! AAATTTATTCATCAGGAGTT+GGG + chr1_3:48909792-48909811 Msa0122330:CDS 25.0%
! CAAACAAAAGTAGTTTCAAA+TGG - chr1_3:48910180-48910199 None:intergenic 25.0%
!!! CATTTGAAACTACTTTTGTT+TGG + chr1_3:48910178-48910197 Msa0122330:intron 25.0%
! TAATGCAATTGCAAACTTAA+TGG + chr1_3:48910244-48910263 Msa0122330:intron 25.0%
!! AAACTTAATGGATCATTGTA+GGG + chr1_3:48910256-48910275 Msa0122330:intron 25.0%
! AATTGTTGAAGAAACTCAAA+AGG + chr1_3:48910372-48910391 Msa0122330:CDS 25.0%
! TCATCTCAAAATTTGTCAAT+TGG - chr1_3:48910408-48910427 None:intergenic 25.0%
!!! AAATTTTGAGATGAAGTTCA+AGG + chr1_3:48910414-48910433 Msa0122330:CDS 25.0%
! CAACAAAGAAATGAAACAAA+AGG - chr1_3:48910616-48910635 None:intergenic 25.0%
! TTCTTAATGAGATAGAATCT+AGG + chr1_3:48911383-48911402 Msa0122330:intron 25.0%
! CACAAAAGAAAGTAATAAGA+TGG - chr1_3:48911597-48911616 None:intergenic 25.0%
!!! GTATTACAGATTTTTTCAAC+TGG - chr1_3:48911638-48911657 None:intergenic 25.0%
! AAAAAATCTGTAATACTTCC+AGG + chr1_3:48911642-48911661 Msa0122330:intron 25.0%
! ATACCAAGTAATCATTAACA+AGG - chr1_3:48911800-48911819 None:intergenic 25.0%
! CAAAACAAACTTTAAACTTG+TGG - chr1_3:48911946-48911965 None:intergenic 25.0%
!!! TTGTTTTGTTCTTTATGAAC+AGG + chr1_3:48911958-48911977 Msa0122330:intron 25.0%
! GTTGTAGTTAAATCAAATTC+TGG + chr1_3:48912326-48912345 Msa0122330:three_prime_UTR 25.0%
!! TTTCCAATAGTTTTCTACAA+AGG - chr1_3:48912354-48912373 None:intergenic 25.0%
! ATGAAAGTGAATGAAGTGTT+GGG - chr1_3:48905355-48905374 None:intergenic 30.0%
TCCACAATACCAAACTAATT+AGG + chr1_3:48905544-48905563 Msa0122330:intron 30.0%
CCACAATACCAAACTAATTA+GGG + chr1_3:48905545-48905564 Msa0122330:intron 30.0%
! CTTTATCTTTGTTATCCTGA+CGG - chr1_3:48905738-48905757 None:intergenic 30.0%
AACTTTCTCTACTTGTTTGT+TGG - chr1_3:48905976-48905995 None:intergenic 30.0%
! GTTTTTGAATCTGTTTGGTA+AGG + chr1_3:48906094-48906113 Msa0122330:intron 30.0%
! AATCTGTTTGGTAAGGTTTT+CGG + chr1_3:48906101-48906120 Msa0122330:intron 30.0%
ATTGATCTCTGTTGTGATTT+CGG - chr1_3:48906128-48906147 None:intergenic 30.0%
TTCTTCACTCTTTCTTCAAT+AGG - chr1_3:48906550-48906569 None:intergenic 30.0%
TTCTTTCACATAGACAGTAA+TGG - chr1_3:48906830-48906849 None:intergenic 30.0%
! CAAGCTTAATCTTGTTGATT+TGG + chr1_3:48906885-48906904 Msa0122330:CDS 30.0%
TCAGAAAATATACTACGTTC+CGG + chr1_3:48906913-48906932 Msa0122330:CDS 30.0%
! TTCTAGAAAAAGTTGAGACA+TGG + chr1_3:48907372-48907391 Msa0122330:intron 30.0%
GTTTGCAACAATATGATTAC+AGG + chr1_3:48907644-48907663 Msa0122330:intron 30.0%
CTTACAGGTTCATATTAACA+CGG + chr1_3:48907757-48907776 Msa0122330:intron 30.0%
! ACACGGTTTTCAATTATTGT+TGG + chr1_3:48907774-48907793 Msa0122330:intron 30.0%
!! ATGACATTTTTAAGGGGTAA+TGG - chr1_3:48908027-48908046 None:intergenic 30.0%
!! GCTGTTATGACATTTTTAAG+GGG - chr1_3:48908033-48908052 None:intergenic 30.0%
! CTGCTGTTATGACATTTTTA+AGG - chr1_3:48908035-48908054 None:intergenic 30.0%
!!! AAACAGCCTTTGAAACTTTT+TGG - chr1_3:48908105-48908124 None:intergenic 30.0%
GAAATTGAGAGAATGAAAGA+AGG + chr1_3:48908145-48908164 Msa0122330:CDS 30.0%
TAGTATTATAACATTGTCCG+AGG + chr1_3:48908372-48908391 Msa0122330:intron 30.0%
ATAAATGTCAACCAAAGACT+CGG - chr1_3:48908644-48908663 None:intergenic 30.0%
! CTACTTGCTGCAAAATAAAT+TGG - chr1_3:48908713-48908732 None:intergenic 30.0%
ATGATCTTCAAGAGAATTAC+AGG + chr1_3:48908916-48908935 Msa0122330:CDS 30.0%
! CAATTGATGATATGCTACAA+AGG + chr1_3:48909003-48909022 Msa0122330:intron 30.0%
TTCTTTGTTCTTGATATGGT+GGG + chr1_3:48909207-48909226 Msa0122330:intron 30.0%
AAAACAATTAACGCATGATG+AGG - chr1_3:48909367-48909386 None:intergenic 30.0%
! AATTTTGCATCTCTCTTGAA+TGG + chr1_3:48909528-48909547 Msa0122330:CDS 30.0%
! ATTTTGCATCTCTCTTGAAT+GGG + chr1_3:48909529-48909548 Msa0122330:CDS 30.0%
GATTTGCATACAACCATTAT+AGG + chr1_3:48909561-48909580 Msa0122330:CDS 30.0%
ACAGAAACAACTTAAATGCA+TGG + chr1_3:48909599-48909618 Msa0122330:CDS 30.0%
GAAATTTATTCATCAGGAGT+TGG + chr1_3:48909791-48909810 Msa0122330:CDS 30.0%
TCATGATTTCAACTTGAGAT+AGG - chr1_3:48910026-48910045 None:intergenic 30.0%
! CAAACTTAATGGATCATTGT+AGG + chr1_3:48910255-48910274 Msa0122330:intron 30.0%
TCTCAAAATTTGTCAATTGG+TGG - chr1_3:48910405-48910424 None:intergenic 30.0%
AAGTTCAAGGTAAGAAAACA+CGG + chr1_3:48910427-48910446 Msa0122330:intron 30.0%
!! AATTGCTGTAATTTGCTCTA+AGG - chr1_3:48910548-48910567 None:intergenic 30.0%
! AGAGCAAATTACAGCAATTT+TGG + chr1_3:48910549-48910568 Msa0122330:CDS 30.0%
ACTTCTGGTAAATATGCTTT+AGG + chr1_3:48910659-48910678 Msa0122330:intron 30.0%
!!! TTCTAGTTTTGTTTTGTGTC+TGG + chr1_3:48910962-48910981 Msa0122330:intron 30.0%
GTGTTTGTGCAAGAATATAT+TGG - chr1_3:48911096-48911115 None:intergenic 30.0%
!! TGCACAAACACTTTTTGTTA+AGG + chr1_3:48911105-48911124 Msa0122330:intron 30.0%
!! CAAACACTTTTTGTTAAGGA+TGG + chr1_3:48911109-48911128 Msa0122330:intron 30.0%
! TGTATGACTGAATTTTCCAT+TGG + chr1_3:48911166-48911185 Msa0122330:intron 30.0%
! CAAATTTTTGATCCAAAGCA+TGG - chr1_3:48911473-48911492 None:intergenic 30.0%
AAAACTCTACATATAAGCAC+AGG - chr1_3:48912189-48912208 None:intergenic 30.0%
TACAACTTATTCTCCCTTTA+CGG - chr1_3:48912312-48912331 None:intergenic 30.0%
GAACCTTTGTAGAAAACTAT+TGG + chr1_3:48912348-48912367 Msa0122330:three_prime_UTR 30.0%
! TTGTTGAGGATTCTAGAAAA+TGG - chr1_3:48912397-48912416 None:intergenic 30.0%
!! GAAAATATGTTGACTTGTTG+AGG - chr1_3:48912411-48912430 None:intergenic 30.0%
GATGAAAGTGAATGAAGTGT+TGG - chr1_3:48905356-48905375 None:intergenic 35.0%
GAGATGAAAGGTTACTTGAT+CGG - chr1_3:48905488-48905507 None:intergenic 35.0%
! TTAGTTTGGTATTGTGGAGA+AGG - chr1_3:48905542-48905561 None:intergenic 35.0%
! CCCTAATTAGTTTGGTATTG+TGG - chr1_3:48905548-48905567 None:intergenic 35.0%
TACTTTCTTAGACTGATCTG+GGG - chr1_3:48905620-48905639 None:intergenic 35.0%
CTACTTTCTTAGACTGATCT+GGG - chr1_3:48905621-48905640 None:intergenic 35.0%
CAGATCAGTCTAAGAAAGTA+GGG + chr1_3:48905620-48905639 Msa0122330:CDS 35.0%
AGTCTAAGAAAGTAGGGTTA+GGG + chr1_3:48905626-48905645 Msa0122330:CDS 35.0%
TTAAAAATGGAGCAGGAGAT+GGG - chr1_3:48905660-48905679 None:intergenic 35.0%
TCGAGAACTTCATTGACAAT+CGG - chr1_3:48906170-48906189 None:intergenic 35.0%
ATTGTCAATGAAGTTCTCGA+TGG + chr1_3:48906170-48906189 Msa0122330:CDS 35.0%
AACTGTACTGTCTTTGCTTA+TGG + chr1_3:48906197-48906216 Msa0122330:CDS 35.0%
GACTGGTAAAACTTATACCA+TGG + chr1_3:48906229-48906248 Msa0122330:CDS 35.0%
TGGTAAAACTTATACCATGG+AGG + chr1_3:48906232-48906251 Msa0122330:CDS 35.0%
GGTAAAACTTATACCATGGA+GGG + chr1_3:48906233-48906252 Msa0122330:CDS 35.0%
ACATAACATCATATAACCGG+TGG - chr1_3:48906316-48906335 None:intergenic 35.0%
AAAATTTGACGAACTGCTCT+CGG - chr1_3:48906418-48906437 None:intergenic 35.0%
! ACCTTTTCCATCTTCCATAA+GGG - chr1_3:48906581-48906600 None:intergenic 35.0%
! TACCTTTTCCATCTTCCATA+AGG - chr1_3:48906582-48906601 None:intergenic 35.0%
! AAAGGTAGTGTGTTGTTAAG+AGG + chr1_3:48906595-48906614 Msa0122330:CDS 35.0%
ATTTATACTCTGTTGGAACG+AGG + chr1_3:48906652-48906671 Msa0122330:CDS 35.0%
!! TTAACTTGATGAACGCGTTT+TGG + chr1_3:48906779-48906798 Msa0122330:intron 35.0%
!! CTTAATCTTGTTGATTTGGC+TGG + chr1_3:48906889-48906908 Msa0122330:CDS 35.0%
TTGCAAGGCAATTTGTCATT+TGG + chr1_3:48906985-48907004 Msa0122330:intron 35.0%
!! CTTGGTTTTTCTCCTGATTT+TGG + chr1_3:48907554-48907573 Msa0122330:intron 35.0%
AAAGAAAGAGGACCAAAATC+AGG - chr1_3:48907569-48907588 None:intergenic 35.0%
CGTGTTAATATGAACCTGTA+AGG - chr1_3:48907759-48907778 None:intergenic 35.0%
ACCTTAATATGCATGCCATT+TGG + chr1_3:48907814-48907833 Msa0122330:intron 35.0%
TGAAATAACAGACAGCCAAA+TGG - chr1_3:48907832-48907851 None:intergenic 35.0%
TCAGAGATAGTAAGCTTACA+AGG + chr1_3:48907849-48907868 Msa0122330:intron 35.0%
AGGATATTACGAGATTCCTT+AGG + chr1_3:48907869-48907888 Msa0122330:CDS 35.0%
ATATTACGAGATTCCTTAGG+AGG + chr1_3:48907872-48907891 Msa0122330:CDS 35.0%
TATTACGAGATTCCTTAGGA+GGG + chr1_3:48907873-48907892 Msa0122330:CDS 35.0%
!!! TGTTTTAGTTTTCCCTCCTA+AGG - chr1_3:48907888-48907907 None:intergenic 35.0%
TCTTCCAAACAATAAGCAGA+CGG - chr1_3:48907932-48907951 None:intergenic 35.0%
GGCAAACCAAAAAGTTTCAA+AGG + chr1_3:48908096-48908115 Msa0122330:intron 35.0%
!! TTCAAAGGCTGTTTTGTTGA+AGG + chr1_3:48908111-48908130 Msa0122330:CDS 35.0%
TTTGTTGAAGGACTTGTACT+TGG + chr1_3:48908123-48908142 Msa0122330:CDS 35.0%
! CTTCTTTTCAGCTTCTTCTT+TGG - chr1_3:48908308-48908327 None:intergenic 35.0%
CAAAGAAGAAGCTGAAAAGA+AGG + chr1_3:48908306-48908325 Msa0122330:CDS 35.0%
!! ATCGAAAAGTATTCATGCAG+AGG - chr1_3:48908407-48908426 None:intergenic 35.0%
GATGCATGTTCTATCTTTCT+TGG + chr1_3:48908504-48908523 Msa0122330:intron 35.0%
TAAATGTCAACCAAAGACTC+GGG - chr1_3:48908643-48908662 None:intergenic 35.0%
AAGATCATGCAATTCATTGC+TGG - chr1_3:48908904-48908923 None:intergenic 35.0%
! GCTAGTTGTTTCAAAGTTGA+AGG + chr1_3:48908938-48908957 Msa0122330:CDS 35.0%
TGTTTCAAAGTTGAAGGAGA+AGG + chr1_3:48908944-48908963 Msa0122330:CDS 35.0%
GTTCTTTGTTCTTGATATGG+TGG + chr1_3:48909206-48909225 Msa0122330:intron 35.0%
TGTTCTTTGTTCCTGATATG+TGG + chr1_3:48909288-48909307 Msa0122330:intron 35.0%
!! TTTTAAAAGGGCCACATATC+AGG - chr1_3:48909302-48909321 None:intergenic 35.0%
TTCTTGCAGATCACAAAGAA+AGG + chr1_3:48909475-48909494 Msa0122330:intron 35.0%
GTGATGTAAGAAAACCAAAG+TGG + chr1_3:48909655-48909674 Msa0122330:intron 35.0%
AACTGAAATAGGATCCACTT+TGG - chr1_3:48909672-48909691 None:intergenic 35.0%
AGTGGATCCTATTTCAGTTA+CGG + chr1_3:48909673-48909692 Msa0122330:intron 35.0%
TCAAGCTTCATTGTATGCTT+TGG + chr1_3:48909961-48909980 Msa0122330:intron 35.0%
TTTGCTCATCAAGAGAATTG+TGG - chr1_3:48910112-48910131 None:intergenic 35.0%
ATTCTCCATTCAACAACAAG+AGG + chr1_3:48910145-48910164 Msa0122330:CDS 35.0%
!! TACTTCCTCTTGTTGTTGAA+TGG - chr1_3:48910153-48910172 None:intergenic 35.0%
AAGTATTATTTCAGCACGAG+TGG + chr1_3:48910288-48910307 Msa0122330:CDS 35.0%
TTCTTCCTTCAACCATAAAC+AGG + chr1_3:48910495-48910514 Msa0122330:intron 35.0%
AACATCTAAGAGAACTGCTA+TGG + chr1_3:48910579-48910598 Msa0122330:CDS 35.0%
! AGTATAGTATGACTGACTTC+TGG + chr1_3:48910644-48910663 Msa0122330:intron 35.0%
! AAATATGCTTTAGGTCTCAG+AGG + chr1_3:48910668-48910687 Msa0122330:intron 35.0%
GAAATTGTTGAAGGACAACT+GGG - chr1_3:48911294-48911313 None:intergenic 35.0%
GTTCTTGTGGAAATTGTTGA+AGG - chr1_3:48911303-48911322 None:intergenic 35.0%
! GTTTCTTCTAGTTAGTGTCT+TGG + chr1_3:48911356-48911375 Msa0122330:intron 35.0%
AACTGTAATCAATGCTCAAC+AGG + chr1_3:48911430-48911449 Msa0122330:intron 35.0%
AACTGGTCAAATAAGCGAAA+GGG - chr1_3:48911621-48911640 None:intergenic 35.0%
CAATTTCCTTCTTGTTCTCA+TGG - chr1_3:48911683-48911702 None:intergenic 35.0%
AGTTCATTACAAGACAAGCA+TGG + chr1_3:48911735-48911754 Msa0122330:CDS 35.0%
! CAAGCATGGTGGAAATATAT+CGG + chr1_3:48911749-48911768 Msa0122330:CDS 35.0%
! GTGCCTTGTTAATGATTACT+TGG + chr1_3:48911794-48911813 Msa0122330:CDS 35.0%
! GTTCTATTTTCTGTTAGACG+CGG - chr1_3:48912127-48912146 None:intergenic 35.0%
!!! TTTTTTCTTCCTCTCCGTAA+AGG + chr1_3:48912295-48912314 Msa0122330:three_prime_UTR 35.0%
! TTTTTCTTCCTCTCCGTAAA+GGG + chr1_3:48912296-48912315 Msa0122330:three_prime_UTR 35.0%
TGATCGGAGAATCTGAGAAA+GGG - chr1_3:48905472-48905491 None:intergenic 40.0%
TTGATCGGAGAATCTGAGAA+AGG - chr1_3:48905473-48905492 None:intergenic 40.0%
GTGGAGAAGGAAAAAGAAGA+GGG - chr1_3:48905529-48905548 None:intergenic 40.0%
TGTGGAGAAGGAAAAAGAAG+AGG - chr1_3:48905530-48905549 None:intergenic 40.0%
CCTACTTTCTTAGACTGATC+TGG - chr1_3:48905622-48905641 None:intergenic 40.0%
CCAGATCAGTCTAAGAAAGT+AGG + chr1_3:48905619-48905638 Msa0122330:CDS 40.0%
CAGTCTAAGAAAGTAGGGTT+AGG + chr1_3:48905625-48905644 Msa0122330:CDS 40.0%
GTTAAAAATGGAGCAGGAGA+TGG - chr1_3:48905661-48905680 None:intergenic 40.0%
! CTTTGTTATCCTGACGGTTA+GGG - chr1_3:48905732-48905751 None:intergenic 40.0%
! TCTTTGTTATCCTGACGGTT+AGG - chr1_3:48905733-48905752 None:intergenic 40.0%
!! TTCAAGTTTTGCTTCGTTGC+AGG + chr1_3:48905767-48905786 Msa0122330:CDS 40.0%
CGTTGTTCTTCATCGCTTAA+TGG - chr1_3:48905885-48905904 None:intergenic 40.0%
GAGAACTTCATTGACAATCG+GGG - chr1_3:48906168-48906187 None:intergenic 40.0%
CGAGAACTTCATTGACAATC+GGG - chr1_3:48906169-48906188 None:intergenic 40.0%
TCTTTGCTTATGGACAGACT+GGG + chr1_3:48906207-48906226 Msa0122330:CDS 40.0%
AAAACTTATACCATGGAGGG+TGG + chr1_3:48906236-48906255 Msa0122330:CDS 40.0%
AAACTTATACCATGGAGGGT+GGG + chr1_3:48906237-48906256 Msa0122330:CDS 40.0%
AACATCATATAACCGGTGGA+AGG - chr1_3:48906312-48906331 None:intergenic 40.0%
CATTGCTTAACAAGAGAAGC+AGG + chr1_3:48906701-48906720 Msa0122330:CDS 40.0%
!! AGAAACAGTAATTGGTGACG+AGG + chr1_3:48906846-48906865 Msa0122330:CDS 40.0%
!! AGAAGCATCATCAAACGCTT+AGG + chr1_3:48907231-48907250 Msa0122330:intron 40.0%
AAATAAGAGCTTACTCACCC+TGG + chr1_3:48907692-48907711 Msa0122330:CDS 40.0%
AATAAGAGCTTACTCACCCT+GGG + chr1_3:48907693-48907712 Msa0122330:CDS 40.0%
GCCAAATGGCATGCATATTA+AGG - chr1_3:48907818-48907837 None:intergenic 40.0%
TAGTCCGTCTGCTTATTGTT+TGG + chr1_3:48907925-48907944 Msa0122330:CDS 40.0%
TGCTCTACTAGCATAGTCTA+GGG - chr1_3:48907966-48907985 None:intergenic 40.0%
TTGCTCTACTAGCATAGTCT+AGG - chr1_3:48907967-48907986 None:intergenic 40.0%
!! TTTTTAAGGGGTAATGGCAG+TGG - chr1_3:48908021-48908040 None:intergenic 40.0%
! GTTTTATCAACCCTTCATGC+AGG + chr1_3:48908558-48908577 Msa0122330:intron 40.0%
ATACTTTCTGACTGAGGTTG+AGG - chr1_3:48908618-48908637 None:intergenic 40.0%
AAATGTCAACCAAAGACTCG+GGG - chr1_3:48908642-48908661 None:intergenic 40.0%
TTCGTATGCACAAGCACAAT+AGG - chr1_3:48908668-48908687 None:intergenic 40.0%
AACAGAGCAAGAACAGAAAC+TGG + chr1_3:48908755-48908774 Msa0122330:CDS 40.0%
GCAAGAACAGAAACTGGATT+TGG + chr1_3:48908761-48908780 Msa0122330:CDS 40.0%
GGATTGCAAGGTGCATAAAA+TGG + chr1_3:48908797-48908816 Msa0122330:intron 40.0%
GAACATAAAAAAGGGCAACC+CGG - chr1_3:48909273-48909292 None:intergenic 40.0%
TGCAGATCACAAAGAAAGGA+TGG + chr1_3:48909479-48909498 Msa0122330:intron 40.0%
AGATCACAAAGAAAGGATGG+AGG + chr1_3:48909482-48909501 Msa0122330:intron 40.0%
ACAGAGACCGTAACTGAAAT+AGG - chr1_3:48909683-48909702 None:intergenic 40.0%
! TGTATTTGCTAGCTCCTTCA+GGG - chr1_3:48909819-48909838 None:intergenic 40.0%
! ATGTATTTGCTAGCTCCTTC+AGG - chr1_3:48909820-48909839 None:intergenic 40.0%
CGTGAAAGCTTCATCTGATA+TGG + chr1_3:48909844-48909863 Msa0122330:CDS 40.0%
GTGGCAAGAAACTGTAAAGA+AGG - chr1_3:48910053-48910072 None:intergenic 40.0%
TTTACAGTTTCTTGCCACTG+TGG + chr1_3:48910055-48910074 Msa0122330:intron 40.0%
GATGCTGTCAATCACATCAT+TGG - chr1_3:48910090-48910109 None:intergenic 40.0%
TCTTGATGAGCAAAAACAGC+TGG + chr1_3:48910118-48910137 Msa0122330:CDS 40.0%
TCTAAAAGGTCAAACTTGCG+AGG + chr1_3:48910466-48910485 Msa0122330:intron 40.0%
CTCTTCCTGTTTATGGTTGA+AGG - chr1_3:48910503-48910522 None:intergenic 40.0%
CTTCAACCATAAACAGGAAG+AGG + chr1_3:48910501-48910520 Msa0122330:intron 40.0%
CAGCTGTAAAGCTACAATAG+AGG + chr1_3:48910848-48910867 Msa0122330:CDS 40.0%
TACAATAGAGGATTGTCTCC+AGG + chr1_3:48910860-48910879 Msa0122330:CDS 40.0%
AAACGAAAACTCACCAATCC+TGG - chr1_3:48910881-48910900 None:intergenic 40.0%
GCAATGCAGTTCAAATACAG+TGG + chr1_3:48911241-48911260 Msa0122330:intron 40.0%
GGAAATTGTTGAAGGACAAC+TGG - chr1_3:48911295-48911314 None:intergenic 40.0%
TCTCTGCAAGATTGTTCTTG+TGG - chr1_3:48911316-48911335 None:intergenic 40.0%
CATCTTGACAAACCATGCTT+TGG + chr1_3:48911458-48911477 Msa0122330:CDS 40.0%
TGTGTCTGCGTCATTATCTA+TGG + chr1_3:48911491-48911510 Msa0122330:CDS 40.0%
! ATGGATGCTGATTATGATGC+AGG + chr1_3:48911510-48911529 Msa0122330:CDS 40.0%
CAACTGGTCAAATAAGCGAA+AGG - chr1_3:48911622-48911641 None:intergenic 40.0%
TTCTGTGACGACACAATTGT+TGG + chr1_3:48911704-48911723 Msa0122330:CDS 40.0%
TCATTACAAGACAAGCATGG+TGG + chr1_3:48911738-48911757 Msa0122330:CDS 40.0%
TATCACGGAAGAGAATTCCA+TGG + chr1_3:48912063-48912082 Msa0122330:CDS 40.0%
!! CCACTTTAATCGGTTTTCCA+TGG - chr1_3:48912083-48912102 None:intergenic 40.0%
CCATGGAAAACCGATTAAAG+TGG + chr1_3:48912080-48912099 Msa0122330:CDS 40.0%
TCTTACATCACACCAACAAG+TGG - chr1_3:48912244-48912263 None:intergenic 40.0%
! CGAGGTGTTAAAAATGGAGC+AGG - chr1_3:48905667-48905686 None:intergenic 45.0%
! TCGGGTCGAGGTGTTAAAAA+TGG - chr1_3:48905673-48905692 None:intergenic 45.0%
ACAACGATCGAATGTTCCGA+AGG + chr1_3:48905899-48905918 Msa0122330:CDS 45.0%
TCATTACACGACACCACCTT+CGG - chr1_3:48905918-48905937 None:intergenic 45.0%
GTCTTTGCTTATGGACAGAC+TGG + chr1_3:48906206-48906225 Msa0122330:CDS 45.0%
CACTCTTTCTTCAATAGGCC+TGG - chr1_3:48906545-48906564 None:intergenic 45.0%
GAAGAAACCTGTAGCCCTTA+TGG + chr1_3:48906564-48906583 Msa0122330:CDS 45.0%
GCCCTTATGGAAGATGGAAA+AGG + chr1_3:48906577-48906596 Msa0122330:CDS 45.0%
AACAAGAGAAGCAGGTAGCT+AGG + chr1_3:48906709-48906728 Msa0122330:intron 45.0%
! GACGAGGAGTTGATTAAGTG+TGG + chr1_3:48906862-48906881 Msa0122330:CDS 45.0%
GAGACTCGAGACAAAGAAAG+AGG - chr1_3:48907581-48907600 None:intergenic 45.0%
ATTCTGCGCATGTACCTTAC+AGG + chr1_3:48907742-48907761 Msa0122330:CDS 45.0%
! TGCAGAGGTTTTGCTTTCCT+CGG - chr1_3:48908392-48908411 None:intergenic 45.0%
ATCAACCCTTCATGCAGGAA+AGG + chr1_3:48908563-48908582 Msa0122330:intron 45.0%
TCACTCCTTTCCTGCATGAA+GGG - chr1_3:48908571-48908590 None:intergenic 45.0%
!! GAAAGTATTCCCCGAGTCTT+TGG + chr1_3:48908630-48908649 Msa0122330:intron 45.0%
GCTCTGTTAAGTAGAGCTCA+CGG - chr1_3:48908743-48908762 None:intergenic 45.0%
! GGATTTGGAATGCGAGCTTA+AGG + chr1_3:48908776-48908795 Msa0122330:CDS 45.0%
ATGCGAGCTTAAGGATTGCA+AGG + chr1_3:48908785-48908804 Msa0122330:CDS 45.0%
TTCCTTTGCACGCTCAATCA+AGG - chr1_3:48909093-48909112 None:intergenic 45.0%
GCGTGCAAAGGAAATGTGTA+CGG + chr1_3:48909100-48909119 Msa0122330:CDS 45.0%
CAACTTGAGATAGGAGAGCA+TGG - chr1_3:48910017-48910036 None:intergenic 45.0%
! ATTGGCTTCAAGAACCACAG+TGG - chr1_3:48910072-48910091 None:intergenic 45.0%
AACCATAAACAGGAAGAGGC+TGG + chr1_3:48910505-48910524 Msa0122330:intron 45.0%
TTCCAGCCTCTTCCTGTTTA+TGG - chr1_3:48910510-48910529 None:intergenic 45.0%
CAAGTGTGCAACAGTCTAAG+AGG + chr1_3:48910712-48910731 Msa0122330:CDS 45.0%
TAGAGGATTGTCTCCAGGAT+TGG + chr1_3:48910865-48910884 Msa0122330:CDS 45.0%
TGAAGAAGACGGACAAGAAC+AGG - chr1_3:48910906-48910925 None:intergenic 45.0%
TTCCATTGGCATTGCTTGCT+TGG + chr1_3:48911180-48911199 Msa0122330:intron 45.0%
!! CAAATACAGTGGACTGTTCC+AGG + chr1_3:48911252-48911271 Msa0122330:CDS 45.0%
AATCTGCTGGCAGATGTGAA+TGG + chr1_3:48911540-48911559 Msa0122330:CDS 45.0%
ACTTCCAGGTGCACTAATGA+TGG + chr1_3:48911656-48911675 Msa0122330:intron 45.0%
GATGGACCATGAGAACAAGA+AGG + chr1_3:48911674-48911693 Msa0122330:CDS 45.0%
GTGGCTAATTCAAAACGTCG+TGG - chr1_3:48911927-48911946 None:intergenic 45.0%
TCATCTCCTCAATGGATGCA+TGG - chr1_3:48912036-48912055 None:intergenic 45.0%
ATGCATCCATTGAGGAGATG+AGG + chr1_3:48912035-48912054 Msa0122330:CDS 45.0%
ATGTGTCCTCATCTCCTCAA+TGG - chr1_3:48912044-48912063 None:intergenic 45.0%
GGAGATGAGGACACATATCA+CGG + chr1_3:48912048-48912067 Msa0122330:CDS 45.0%
! CGGAATTTTGCTTTCTGCTG+CGG - chr1_3:48912107-48912126 None:intergenic 45.0%
AACTGATGAGCACCACTTGT+TGG + chr1_3:48912229-48912248 Msa0122330:three_prime_UTR 45.0%
CTTATTCTCCCTTTACGGAG+AGG - chr1_3:48912307-48912326 None:intergenic 45.0%
!!! TAATTTAATTTTCTAATTTT+AGG + chr1_3:48905859-48905878 Msa0122330:intron 5.0%
AGAATCTGAGAAAGGGTGGG+TGG - chr1_3:48905465-48905484 None:intergenic 50.0%
CGGAGAATCTGAGAAAGGGT+GGG - chr1_3:48905468-48905487 None:intergenic 50.0%
TCGGAGAATCTGAGAAAGGG+TGG - chr1_3:48905469-48905488 None:intergenic 50.0%
ACGATCGAATGTTCCGAAGG+TGG + chr1_3:48905902-48905921 Msa0122330:CDS 50.0%
TGACAATCGGGGCAATTGCT+TGG - chr1_3:48906157-48906176 None:intergenic 50.0%
ATTTCTCATCCCACCCTCCA+TGG - chr1_3:48906249-48906268 None:intergenic 50.0%
GGAGGGTGGGATGAGAAATA+AGG + chr1_3:48906250-48906269 Msa0122330:CDS 50.0%
CGACTCACATTTCCTTCCAC+CGG + chr1_3:48906297-48906316 Msa0122330:intron 50.0%
GGGTGGTGATTTAACTGCTG+AGG + chr1_3:48906381-48906400 Msa0122330:intron 50.0%
GGTGATTTAACTGCTGAGGC+TGG + chr1_3:48906385-48906404 Msa0122330:CDS 50.0%
CTCCAGATGACAGTTCTACC+AGG + chr1_3:48906524-48906543 Msa0122330:CDS 50.0%
CCATCTTCCATAAGGGCTAC+AGG - chr1_3:48906574-48906593 None:intergenic 50.0%
CCTGTAGCCCTTATGGAAGA+TGG + chr1_3:48906571-48906590 Msa0122330:CDS 50.0%
!! TGGAACGAGGAGCATCAAAG+AGG + chr1_3:48906665-48906684 Msa0122330:CDS 50.0%
! TGCTTTTACCTCACGTGCTC+CGG - chr1_3:48906935-48906954 None:intergenic 50.0%
CGCATTTATCACACGTCCCA+GGG - chr1_3:48907712-48907731 None:intergenic 50.0%
ACGTGTGATAAATGCGCTCG+TGG + chr1_3:48907716-48907735 Msa0122330:CDS 50.0%
CTCACTCCTTTCCTGCATGA+AGG - chr1_3:48908572-48908591 None:intergenic 50.0%
CGGGGAATACTTTCTGACTG+AGG - chr1_3:48908624-48908643 None:intergenic 50.0%
TGCCTTGATTGAGCGTGCAA+AGG + chr1_3:48909088-48909107 Msa0122330:CDS 50.0%
!! TTTTCAGGCAGCACATGCTC+TGG + chr1_3:48909745-48909764 Msa0122330:intron 50.0%
TTCAGCACGAGTGGTTTCAG+AGG + chr1_3:48910297-48910316 Msa0122330:CDS 50.0%
!! TTTAGGTCTCAGAGGCGTCA+AGG + chr1_3:48910676-48910695 Msa0122330:intron 50.0%
!! AGAGGCGTCAAGGAATATGC+AGG + chr1_3:48910686-48910705 Msa0122330:CDS 50.0%
CACCAAGCAAGCAATGCCAA+TGG - chr1_3:48911185-48911204 None:intergenic 50.0%
TGCAGGAACACACAATCTGC+TGG + chr1_3:48911527-48911546 Msa0122330:CDS 50.0%
TGGTCCATCATTAGTGCACC+TGG - chr1_3:48911663-48911682 None:intergenic 50.0%
TCCTCAATGGATGCATGGCT+GGG - chr1_3:48912031-48912050 None:intergenic 50.0%
CTGCTGCGGTCCACTTTAAT+CGG - chr1_3:48912093-48912112 None:intergenic 50.0%
CGATCAGAGCCTCGTGAATC+GGG - chr1_3:48905706-48905725 None:intergenic 55.0%
CCGATCAGAGCCTCGTGAAT+CGG - chr1_3:48905707-48905726 None:intergenic 55.0%
! CCGATTCACGAGGCTCTGAT+CGG + chr1_3:48905704-48905723 Msa0122330:CDS 55.0%
TGATCGGAACCCTAACCGTC+AGG + chr1_3:48905720-48905739 Msa0122330:CDS 55.0%
GCTTATGGACAGACTGGGAC+TGG + chr1_3:48906212-48906231 Msa0122330:CDS 55.0%
GGCCTGGTAGAACTGTCATC+TGG - chr1_3:48906529-48906548 None:intergenic 55.0%
TCTCCCCTGCTTCTCTAGCA+CGG - chr1_3:48907671-48907690 None:intergenic 55.0%
GCGCATTTATCACACGTCCC+AGG - chr1_3:48907713-48907732 None:intergenic 55.0%
TGGCAGTGGTAACTGACCTC+AGG - chr1_3:48908007-48908026 None:intergenic 55.0%
ATGCAGATGTACGAGCAGCG+AGG + chr1_3:48908245-48908264 Msa0122330:intron 55.0%
TGCAGATGTACGAGCAGCGA+GGG + chr1_3:48908246-48908265 Msa0122330:intron 55.0%
CGAGCAGCGAGGGAAAAGAA+TGG + chr1_3:48908256-48908275 Msa0122330:CDS 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr1_3:48909246-48909265 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr1_3:48909247-48909266 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr1_3:48909251-48909270 Msa0122330:intron 55.0%
!! CAGCACATGCTCTGGAAGCA+AGG + chr1_3:48909753-48909772 Msa0122330:CDS 55.0%
ATCAGGAGTTGGGACCCTGA+AGG + chr1_3:48909802-48909821 Msa0122330:CDS 55.0%
GGAAGAGGCTGGAAGAGATG+AGG + chr1_3:48910516-48910535 Msa0122330:intron 55.0%
AGAGGCTGGAAGAGATGAGG+AGG + chr1_3:48910519-48910538 Msa0122330:CDS 55.0%
TGGACTGTTCCAGGAAGCAG+TGG + chr1_3:48911261-48911280 Msa0122330:CDS 55.0%
GGACTGTTCCAGGAAGCAGT+GGG + chr1_3:48911262-48911281 Msa0122330:CDS 55.0%
CCTCAATGGATGCATGGCTG+GGG - chr1_3:48912030-48912049 None:intergenic 55.0%
CTCCTCAATGGATGCATGGC+TGG - chr1_3:48912032-48912051 None:intergenic 55.0%
TGAATCGGGACGACGGCGTT+CGG - chr1_3:48905692-48905711 None:intergenic 60.0%
AGCCTCGTGAATCGGGACGA+CGG - chr1_3:48905699-48905718 None:intergenic 60.0%
ACTACGTTCCGGAGCACGTG+AGG + chr1_3:48906924-48906943 Msa0122330:CDS 60.0%
AGGGCCGTGCTAGAGAAGCA+GGG + chr1_3:48907664-48907683 Msa0122330:intron 60.0%
! GATATGGTGGGACCCCTTCC+CGG + chr1_3:48909219-48909238 Msa0122330:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr1_3:48909252-48909271 Msa0122330:intron 60.0%
GGCACTTTCCCACTGCTTCC+TGG - chr1_3:48911273-48911292 None:intergenic 60.0%
CCCCAGCCATGCATCCATTG+AGG + chr1_3:48912027-48912046 Msa0122330:CDS 60.0%
GAATCGGGACGACGGCGTTC+GGG - chr1_3:48905691-48905710 None:intergenic 65.0%
CAGGGCCGTGCTAGAGAAGC+AGG + chr1_3:48907663-48907682 Msa0122330:intron 65.0%
GGGCCGTGCTAGAGAAGCAG+GGG + chr1_3:48907665-48907684 Msa0122330:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr1_3:48909234-48909253 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr1_3:48909235-48909254 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr1_3:48909234-48909253 Msa0122330:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr1_3:48909235-48909254 Msa0122330:intron 65.0%
CGCCGTCGTCCCGATTCACG+AGG + chr1_3:48905694-48905713 Msa0122330:CDS 70.0%
CGCATACGCAGGGTCCGGGA+AGG - chr1_3:48909236-48909255 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr1_3:48909240-48909259 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr1_3:48909241-48909260 None:intergenic 70.0%
GGACGACGGCGTTCGGGTCG+AGG - chr1_3:48905685-48905704 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 48905346 48912490 48905346 ID=Msa0122330;Name=Msa0122330
chr1_3 mRNA 48905346 48912490 48905346 ID=Msa0122330-mRNA-1;Parent=Msa0122330;Name=Msa0122330-mRNA-1;_AED=0.13;_eAED=0.13;_QI=169|1|1|1|0.95|0.91|24|322|1044
chr1_3 exon 48905346 48905492 48905346 ID=Msa0122330-mRNA-1:exon:14777;Parent=Msa0122330-mRNA-1
chr1_3 exon 48905582 48905788 48905582 ID=Msa0122330-mRNA-1:exon:14778;Parent=Msa0122330-mRNA-1
chr1_3 exon 48905881 48906010 48905881 ID=Msa0122330-mRNA-1:exon:14779;Parent=Msa0122330-mRNA-1
chr1_3 exon 48906116 48906271 48906116 ID=Msa0122330-mRNA-1:exon:14780;Parent=Msa0122330-mRNA-1
chr1_3 exon 48906382 48906722 48906382 ID=Msa0122330-mRNA-1:exon:14781;Parent=Msa0122330-mRNA-1
chr1_3 exon 48906807 48906945 48906807 ID=Msa0122330-mRNA-1:exon:14782;Parent=Msa0122330-mRNA-1
chr1_3 exon 48907666 48907763 48907666 ID=Msa0122330-mRNA-1:exon:14783;Parent=Msa0122330-mRNA-1
chr1_3 exon 48907853 48908009 48907853 ID=Msa0122330-mRNA-1:exon:14784;Parent=Msa0122330-mRNA-1
chr1_3 exon 48908097 48908166 48908097 ID=Msa0122330-mRNA-1:exon:14785;Parent=Msa0122330-mRNA-1
chr1_3 exon 48908251 48908327 48908251 ID=Msa0122330-mRNA-1:exon:14786;Parent=Msa0122330-mRNA-1
chr1_3 exon 48908580 48908633 48908580 ID=Msa0122330-mRNA-1:exon:14787;Parent=Msa0122330-mRNA-1
chr1_3 exon 48908726 48908806 48908726 ID=Msa0122330-mRNA-1:exon:14788;Parent=Msa0122330-mRNA-1
chr1_3 exon 48908885 48908996 48908885 ID=Msa0122330-mRNA-1:exon:14789;Parent=Msa0122330-mRNA-1
chr1_3 exon 48909084 48909170 48909084 ID=Msa0122330-mRNA-1:exon:14790;Parent=Msa0122330-mRNA-1
chr1_3 exon 48909484 48909659 48909484 ID=Msa0122330-mRNA-1:exon:14791;Parent=Msa0122330-mRNA-1
chr1_3 exon 48909752 48909913 48909752 ID=Msa0122330-mRNA-1:exon:14792;Parent=Msa0122330-mRNA-1
chr1_3 exon 48910062 48910169 48910062 ID=Msa0122330-mRNA-1:exon:14793;Parent=Msa0122330-mRNA-1
chr1_3 exon 48910277 48910435 48910277 ID=Msa0122330-mRNA-1:exon:14794;Parent=Msa0122330-mRNA-1
chr1_3 exon 48910517 48910600 48910517 ID=Msa0122330-mRNA-1:exon:14795;Parent=Msa0122330-mRNA-1
chr1_3 exon 48910681 48910886 48910681 ID=Msa0122330-mRNA-1:exon:14796;Parent=Msa0122330-mRNA-1
chr1_3 exon 48911250 48911351 48911250 ID=Msa0122330-mRNA-1:exon:14797;Parent=Msa0122330-mRNA-1
chr1_3 exon 48911452 48911561 48911452 ID=Msa0122330-mRNA-1:exon:14798;Parent=Msa0122330-mRNA-1
chr1_3 exon 48911664 48911815 48911664 ID=Msa0122330-mRNA-1:exon:14799;Parent=Msa0122330-mRNA-1
chr1_3 exon 48911980 48912490 48911980 ID=Msa0122330-mRNA-1:exon:14800;Parent=Msa0122330-mRNA-1
chr1_3 five_prime_UTR 48905346 48905492 48905346 ID=Msa0122330-mRNA-1:five_prime_utr;Parent=Msa0122330-mRNA-1
chr1_3 five_prime_UTR 48905582 48905603 48905582 ID=Msa0122330-mRNA-1:five_prime_utr;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48905604 48905788 48905604 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48905881 48906010 48905881 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48906116 48906271 48906116 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48906382 48906722 48906382 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48906807 48906945 48906807 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48907666 48907763 48907666 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48907853 48908009 48907853 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48908097 48908166 48908097 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48908251 48908327 48908251 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48908580 48908633 48908580 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48908726 48908806 48908726 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48908885 48908996 48908885 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48909084 48909170 48909084 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48909484 48909659 48909484 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48909752 48909913 48909752 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48910062 48910169 48910062 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48910277 48910435 48910277 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48910517 48910600 48910517 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48910681 48910886 48910681 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48911250 48911351 48911250 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48911452 48911561 48911452 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48911664 48911815 48911664 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 CDS 48911980 48912168 48911980 ID=Msa0122330-mRNA-1:cds;Parent=Msa0122330-mRNA-1
chr1_3 three_prime_UTR 48912169 48912490 48912169 ID=Msa0122330-mRNA-1:three_prime_utr;Parent=Msa0122330-mRNA-1
Gene Sequence

>Msa0122330

ATGACGTCAATGACCCCAGATCAGTCTAAGAAAGTAGGGTTAGGGATGACAATCCCATCTCCTGCTCCATTTTTAACACCTCGACCCGAACGCCGTCGTCCCGATTCACGAGGCTCTGATCGGAACCCTAACCGTCAGGATAACAAAGATAAAGAGACTAATGTTCAAGTTTTGCTTCGTTGCAGGCCATTAAGCGATGAAGAACAACGATCGAATGTTCCGAAGGTGGTGTCGTGTAATGAAAATAAAAGGGAAGTGACTGTTATGCATACTATAGCCAACAAACAAGTAGAGAAAGTTTTCAATTTTGACAAGGTTTTCGGACCGAAATCACAACAGAGATCAATATACGACCAAGCAATTGCCCCGATTGTCAATGAAGTTCTCGATGGTTTCAACTGTACTGTCTTTGCTTATGGACAGACTGGGACTGGTAAAACTTATACCATGGAGGGTGGGATGAGAAATAAGGGTGGTGATTTAACTGCTGAGGCTGGTGTTATTCCGAGAGCAGTTCGTCAAATTTTTGATATTTTGGAAGAACAAAGTGCTGACTATAGCATGAAAGTCACATTTCTTGAGCTGTATAATGAAGAAATAACTGATCTGTTGTCTCCAGATGACAGTTCTACCAGGCCTATTGAAGAAAGAGTGAAGAAACCTGTAGCCCTTATGGAAGATGGAAAAGGTAGTGTGTTGTTAAGAGGACTTGAAGAAGAATCAGTATATAGTGTAAATGAAATTTATACTCTGTTGGAACGAGGAGCATCAAAGAGGCGTACTTCTGAGACATTGCTTAACAAGAGAAGCAGTCGTTCGCATTCAGTGTTCACCATTACTGTCTATGTGAAAGAAACAGTAATTGGTGACGAGGAGTTGATTAAGTGTGGCAAGCTTAATCTTGTTGATTTGGCTGGATCAGAAAATATACTACGTTCCGGAGCACGTGAGGGCCGTGCTAGAGAAGCAGGGGAGATAAATAAGAGCTTACTCACCCTGGGACGTGTGATAAATGCGCTCGTGGAGCATTCTGCGCATGTACCTTACAGAGATAGTAAGCTTACAAGGATATTACGAGATTCCTTAGGAGGGAAAACTAAAACATGCATAATTGCTACTATTAGTCCGTCTGCTTATTGTTTGGAAGAAACACTAAGTACCCTAGACTATGCTAGTAGAGCAAAAAATATAAAGAATAAGCCTGAGGCAAACCAAAAAGTTTCAAAGGCTGTTTTGTTGAAGGACTTGTACTTGGAAATTGAGAGAATGAAAGAAGATGTACGAGCAGCGAGGGAAAAGAATGGTGTATATATTTCGCATGAAAGATTCGCCAAAGAAGAAGCTGAAAAGAAGGAAAGGAGTGAGAAGATAGATCAATTAGAGAATGACCTCAACCTCAGTCAGAAACAAGTAGACAAATTCCGTGAGCTCTACTTAACAGAGCAAGAACAGAAACTGGATTTGGAATGCGAGCTTAAGGATTGCAAGGTGAATTTTGAAAAAACCAGCAATGAATTGCATGATCTTCAAGAGAATTACAGGCTAGTTGTTTCAAAGTTGAAGGAGAAGGAGTGCACCATTTCTAAACTACTGAAATCAGAAAATGCCTTGATTGAGCGTGCAAAGGAAATGTGTACGGATCTTCAGAATGCATCAGATGATATAAATTTTTTGTCATCTAAGTTGGATCACAAAGAAAGGATGGAGGCAGAAAACCAAAAAATAATCGTGAATTTTGCATCTCTCTTGAATGGGAGCTTGAAAGATTTGCATACAACCATTATAGGATCTATTTCTCAACAACAGAAACAACTTAAATGCATGGAAGATCATGTTTGCTCTCATCTTGCCAGTAAAAGTGATGCAGCACATGCTCTGGAAGCAAGGATCAAGAAAATGACAGAAATTTATTCATCAGGAGTTGGGACCCTGAAGGAGCTAGCAAATACATTGCACGTGAAAGCTTCATCTGATATGGAACAGATACAGAATAAAGTTTCATCACAGACATTAGCTGTTGAGAATTTTCTTGCCACTGTGGTTCTTGAAGCCAATGATGTGATTGACAGCATCCACAATTCTCTTGATGAGCAAAAACAGCTGGTAGCATTCTCCATTCAACAACAAGAGGAAGGATTACAACAAAGTATTATTTCAGCACGAGTGGTTTCAGAGGCAACTGTAAAATTCTTCGACAACATTAATATGCATTCTTCAAGAGTAATGAAAATTGTTGAAGAAACTCAAAAGGAGAGATTCCACCAATTGACAAATTTTGAGATGAAGTTCAAGGAAGAGGCTGGAAGAGATGAGGAGGAAGCCTTAGAGCAAATTACAGCAATTTTGGCAAACTTAACATCTAAGAGAACTGCTATGGTCTCAGAGGCGTCAAGGAATATGCAGGATGCAAGTGTGCAACAGTCTAAGAGGTTGCAGCTAGAGATGTTCAACATGCAGCAAGTTTCTAAAGATGCTACCAATGAAGTTAATGAATATGTAGAGAATGCAAATAGCCAATTTGTGAAACAAATATTTTCAGTAAACAGCTGTAAAGCTACAATAGAGGATTGTCTCCAGGATTGTTCAAATACAGTGGACTGTTCCAGGAAGCAGTGGGAAAGTGCCCAGTTGTCCTTCAACAATTTCCACAAGAACAATCTTGCAGAGATAGAATCTACAGTGAAGAAAAACATCTTGACAAACCATGCTTTGGATCAAAAATTTGTGTCTGCGTCATTATCTATGGATGCTGATTATGATGCAGGAACACACAATCTGCTGGCAGATGTGAATGGTGCACTAATGATGGACCATGAGAACAAGAAGGAAATTGATTCTGTGACGACACAATTGTTGGAACAGCTTAGTTCATTACAAGACAAGCATGGTGGAAATATATCGGATATCAATATTGAAGCAGAAAAGTGCCTTGTTAATGATTACTTGGTTGACAAGCATACAAGTTCAACATCTCACAAAAATATTGTATCAGTCCCCAGCCATGCATCCATTGAGGAGATGAGGACACATATCACGGAAGAGAATTCCATGGAAAACCGATTAAAGTGGACCGCAGCAGAAAGCAAAATTCCGCGTCTAACAGAAAATAGAACTCCATTTGCAAATGTTAATTGA
Protein sequence

>Msa0122330

MTSMTPDQSKKVGLGMTIPSPAPFLTPRPERRRPDSRGSDRNPNRQDNKDKETNVQVLLRCRPLSDEEQRSNVPKVVSCNENKREVTVMHTIANKQVEKVFNFDKVFGPKSQQRSIYDQAIAPIVNEVLDGFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLTAEAGVIPRAVRQIFDILEEQSADYSMKVTFLELYNEEITDLLSPDDSSTRPIEERVKKPVALMEDGKGSVLLRGLEEESVYSVNEIYTLLERGASKRRTSETLLNKRSSRSHSVFTITVYVKETVIGDEELIKCGKLNLVDLAGSENILRSGAREGRAREAGEINKSLLTLGRVINALVEHSAHVPYRDSKLTRILRDSLGGKTKTCIIATISPSAYCLEETLSTLDYASRAKNIKNKPEANQKVSKAVLLKDLYLEIERMKEDVRAAREKNGVYISHERFAKEEAEKKERSEKIDQLENDLNLSQKQVDKFRELYLTEQEQKLDLECELKDCKVNFEKTSNELHDLQENYRLVVSKLKEKECTISKLLKSENALIERAKEMCTDLQNASDDINFLSSKLDHKERMEAENQKIIVNFASLLNGSLKDLHTTIIGSISQQQKQLKCMEDHVCSHLASKSDAAHALEARIKKMTEIYSSGVGTLKELANTLHVKASSDMEQIQNKVSSQTLAVENFLATVVLEANDVIDSIHNSLDEQKQLVAFSIQQQEEGLQQSIISARVVSEATVKFFDNINMHSSRVMKIVEETQKERFHQLTNFEMKFKEEAGRDEEEALEQITAILANLTSKRTAMVSEASRNMQDASVQQSKRLQLEMFNMQQVSKDATNEVNEYVENANSQFVKQIFSVNSCKATIEDCLQDCSNTVDCSRKQWESAQLSFNNFHKNNLAEIESTVKKNILTNHALDQKFVSASLSMDADYDAGTHNLLADVNGALMMDHENKKEIDSVTTQLLEQLSSLQDKHGGNISDINIEAEKCLVNDYLVDKHTSSTSHKNIVSVPSHASIEEMRTHITEENSMENRLKWTAAESKIPRLTENRTPFANVN*