Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073900 | XP_003625080.1 | 97.963 | 589 | 11 | 1 | 1 | 589 | 1 | 588 | 0.0 | 1190 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073900 | sp|Q54VD8|RIO1_DICDI | 49.041 | 469 | 204 | 7 | 115 | 581 | 129 | 564 | 2.07e-143 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073900 | Q2HRF6 | 97.963 | 589 | 11 | 1 | 1 | 589 | 1 | 588 | 0.0 | 1190 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025730 | Msa1073900 | 0.840247 | 9.751919e-58 | -8.615850e-47 |
| Msa0027260 | Msa1073900 | 0.815120 | 1.087754e-51 | -8.615850e-47 |
| Msa0032260 | Msa1073900 | 0.814025 | 1.900754e-51 | -8.615850e-47 |
| Msa0032580 | Msa1073900 | 0.816480 | 5.410642e-52 | -8.615850e-47 |
| Msa0043660 | Msa1073900 | 0.841163 | 5.612928e-58 | -8.615850e-47 |
| Msa0047160 | Msa1073900 | 0.838924 | 2.153460e-57 | -8.615850e-47 |
| Msa0057140 | Msa1073900 | 0.809815 | 1.570436e-50 | -8.615850e-47 |
| Msa0059110 | Msa1073900 | 0.813614 | 2.340747e-51 | -8.615850e-47 |
| Msa0073700 | Msa1073900 | 0.801885 | 7.290306e-49 | -8.615850e-47 |
| Msa0094470 | Msa1073900 | 0.860689 | 1.733679e-63 | -8.615850e-47 |
| Msa0610430 | Msa1073900 | 0.808076 | 3.700032e-50 | -8.615850e-47 |
| Msa0615440 | Msa1073900 | 0.800868 | 1.177588e-48 | -8.615850e-47 |
| Msa0615870 | Msa1073900 | 0.808533 | 2.955392e-50 | -8.615850e-47 |
| Msa0621950 | Msa1073900 | 0.811639 | 6.330948e-51 | -8.615850e-47 |
| Msa0660490 | Msa1073900 | 0.801322 | 9.512213e-49 | -8.615850e-47 |
| Msa0689260 | Msa1073900 | 0.845819 | 3.201364e-59 | -8.615850e-47 |
| Msa0696130 | Msa1073900 | 0.814183 | 1.754392e-51 | -8.615850e-47 |
| Msa0697940 | Msa1073900 | 0.816426 | 5.565469e-52 | -8.615850e-47 |
| Msa0698060 | Msa1073900 | 0.834483 | 2.919954e-56 | -8.615850e-47 |
| Msa0698490 | Msa1073900 | 0.802568 | 5.273370e-49 | -8.615850e-47 |
| Msa0698660 | Msa1073900 | 0.806556 | 7.768172e-50 | -8.615850e-47 |
| Msa0709500 | Msa1073900 | 0.801274 | 9.726373e-49 | -8.615850e-47 |
| Msa0711780 | Msa1073900 | 0.829030 | 6.466782e-55 | -8.615850e-47 |
| Msa0715650 | Msa1073900 | 0.830996 | 2.144248e-55 | -8.615850e-47 |
| Msa0715700 | Msa1073900 | 0.813792 | 2.139184e-51 | -8.615850e-47 |
| Msa0719420 | Msa1073900 | 0.803234 | 3.842045e-49 | -8.615850e-47 |
| Msa0722020 | Msa1073900 | 0.806336 | 8.641969e-50 | -8.615850e-47 |
| Msa0726860 | Msa1073900 | 0.803255 | 3.803548e-49 | -8.615850e-47 |
| Msa0733480 | Msa1073900 | 0.814658 | 1.376981e-51 | -8.615850e-47 |
| Msa0750430 | Msa1073900 | 0.804655 | 1.946479e-49 | -8.615850e-47 |
| Msa0753140 | Msa1073900 | 0.803761 | 2.986989e-49 | -8.615850e-47 |
| Msa0763020 | Msa1073900 | 0.801351 | 9.382105e-49 | -8.615850e-47 |
| Msa0763070 | Msa1073900 | 0.800877 | 1.172577e-48 | -8.615850e-47 |
| Msa0771720 | Msa1073900 | 0.826552 | 2.547645e-54 | -8.615850e-47 |
| Msa0772480 | Msa1073900 | 0.805922 | 1.056463e-49 | -8.615850e-47 |
| Msa0774540 | Msa1073900 | 0.807835 | 4.162818e-50 | -8.615850e-47 |
| Msa0783790 | Msa1073900 | 0.820857 | 5.494277e-53 | -8.615850e-47 |
| Msa0786270 | Msa1073900 | 0.817992 | 2.473294e-52 | -8.615850e-47 |
| Msa0789680 | Msa1073900 | 0.805660 | 1.198883e-49 | -8.615850e-47 |
| Msa0790850 | Msa1073900 | 0.816086 | 6.630162e-52 | -8.615850e-47 |
| Msa0794670 | Msa1073900 | 0.815311 | 9.864601e-52 | -8.615850e-47 |
| Msa0798440 | Msa1073900 | 0.818004 | 2.457072e-52 | -8.615850e-47 |
| Msa0802410 | Msa1073900 | 0.811428 | 7.036626e-51 | -8.615850e-47 |
| Msa0805500 | Msa1073900 | 0.803164 | 3.972958e-49 | -8.615850e-47 |
| Msa0812140 | Msa1073900 | 0.803220 | 3.867655e-49 | -8.615850e-47 |
| Msa0812570 | Msa1073900 | 0.807238 | 5.573628e-50 | -8.615850e-47 |
| Msa0830540 | Msa1073900 | 0.824234 | 9.016016e-54 | -8.615850e-47 |
| Msa0127310 | Msa1073900 | 0.835172 | 1.958281e-56 | -8.615850e-47 |
| Msa0137550 | Msa1073900 | 0.845331 | 4.340748e-59 | -8.615850e-47 |
| Msa0141340 | Msa1073900 | 0.801890 | 7.274357e-49 | -8.615850e-47 |
| Msa0159170 | Msa1073900 | 0.824240 | 8.983734e-54 | -8.615850e-47 |
| Msa0165660 | Msa1073900 | 0.814831 | 1.261131e-51 | -8.615850e-47 |
| Msa0168230 | Msa1073900 | 0.802007 | 6.880851e-49 | -8.615850e-47 |
| Msa0220720 | Msa1073900 | 0.819004 | 1.458306e-52 | -8.615850e-47 |
| Msa0226470 | Msa1073900 | 0.835066 | 2.082581e-56 | -8.615850e-47 |
| Msa0228070 | Msa1073900 | 0.826457 | 2.683921e-54 | -8.615850e-47 |
| Msa0366890 | Msa1073900 | 0.820292 | 7.408247e-53 | -8.615850e-47 |
| Msa0369220 | Msa1073900 | 0.826554 | 2.545229e-54 | -8.615850e-47 |
| Msa0372670 | Msa1073900 | 0.805334 | 1.403328e-49 | -8.615850e-47 |
| Msa0376300 | Msa1073900 | 0.809982 | 1.445794e-50 | -8.615850e-47 |
| Msa0385580 | Msa1073900 | 0.840769 | 7.121649e-58 | -8.615850e-47 |
| Msa0387730 | Msa1073900 | 0.808243 | 3.408434e-50 | -8.615850e-47 |
| Msa0388050 | Msa1073900 | 0.807758 | 4.321926e-50 | -8.615850e-47 |
| Msa0388700 | Msa1073900 | 0.818541 | 1.857189e-52 | -8.615850e-47 |
| Msa0397540 | Msa1073900 | 0.815985 | 6.982685e-52 | -8.615850e-47 |
| Msa0402650 | Msa1073900 | 0.805058 | 1.603049e-49 | -8.615850e-47 |
| Msa0422840 | Msa1073900 | 0.812060 | 5.125595e-51 | -8.615850e-47 |
| Msa0422920 | Msa1073900 | 0.802494 | 5.462706e-49 | -8.615850e-47 |
| Msa0453230 | Msa1073900 | 0.809357 | 1.969476e-50 | -8.615850e-47 |
| Msa0458060 | Msa1073900 | 0.803912 | 2.779115e-49 | -8.615850e-47 |
| Msa0465550 | Msa1073900 | 0.801097 | 1.057504e-48 | -8.615850e-47 |
| Msa0471590 | Msa1073900 | 0.817736 | 2.824929e-52 | -8.615850e-47 |
| Msa0987370 | Msa1073900 | 0.807001 | 6.255275e-50 | -8.615850e-47 |
| Msa0989540 | Msa1073900 | 0.840389 | 8.956030e-58 | -8.615850e-47 |
| Msa1006840 | Msa1073900 | 0.800346 | 1.504675e-48 | -8.615850e-47 |
| Msa1013040 | Msa1073900 | 0.803129 | 4.039452e-49 | -8.615850e-47 |
| Msa1013400 | Msa1073900 | 0.817545 | 3.119045e-52 | -8.615850e-47 |
| Msa1014420 | Msa1073900 | 0.809169 | 2.160578e-50 | -8.615850e-47 |
| Msa1019240 | Msa1073900 | 0.813169 | 2.933108e-51 | -8.615850e-47 |
| Msa1019260 | Msa1073900 | 0.818027 | 2.428318e-52 | -8.615850e-47 |
| Msa1034000 | Msa1073900 | 0.911185 | 8.091065e-83 | -8.615850e-47 |
| Msa1046020 | Msa1073900 | 0.809550 | 1.790617e-50 | -8.615850e-47 |
| Msa1046060 | Msa1073900 | 0.810858 | 9.354245e-51 | -8.615850e-47 |
| Msa1051200 | Msa1073900 | 0.811777 | 5.907987e-51 | -8.615850e-47 |
| Msa1055410 | Msa1073900 | 0.822258 | 2.608658e-53 | -8.615850e-47 |
| Msa1073900 | Msa1077030 | 0.803009 | 4.275856e-49 | -8.615850e-47 |
| Msa1073900 | Msa1084470 | 0.845926 | 2.993773e-59 | -8.615850e-47 |
| Msa1073900 | Msa1091100 | 0.806412 | 8.329215e-50 | -8.615850e-47 |
| Msa1073900 | Msa1091940 | 0.801035 | 1.088529e-48 | -8.615850e-47 |
| Msa1073900 | Msa1093530 | 0.823618 | 1.256828e-53 | -8.615850e-47 |
| Msa1073900 | Msa1104140 | 0.817125 | 3.878943e-52 | -8.615850e-47 |
| Msa1073900 | Msa1104210 | 0.805706 | 1.172926e-49 | -8.615850e-47 |
| Msa1073900 | Msa1119200 | 0.880581 | 4.878608e-70 | -8.615850e-47 |
| Msa1073900 | Msa1134090 | 0.800473 | 1.417953e-48 | -8.615850e-47 |
| Msa1073900 | Msa1136540 | 0.801591 | 8.377727e-49 | -8.615850e-47 |
| Msa1073900 | Msa1137700 | 0.831337 | 1.767282e-55 | -8.615850e-47 |
| Msa1073900 | Msa1160590 | 0.810138 | 1.338184e-50 | -8.615850e-47 |
| Msa1073900 | Msa1171360 | 0.801230 | 9.930533e-49 | -8.615850e-47 |
| Msa1073900 | Msa1204250 | 0.800183 | 1.624472e-48 | -8.615850e-47 |
| Msa1073900 | Msa1207270 | 0.811261 | 7.650075e-51 | -8.615850e-47 |
| Msa1073900 | Msa1217830 | 0.831192 | 1.918674e-55 | -8.615850e-47 |
| Msa1073900 | Msa1218600 | 0.828924 | 6.859836e-55 | -8.615850e-47 |
| Msa1073900 | Msa1224810 | 0.823289 | 1.500711e-53 | -8.615850e-47 |
| Msa1073900 | Msa1257510 | 0.809357 | 1.969770e-50 | -8.615850e-47 |
| Msa1073900 | Msa1265630 | 0.839867 | 1.225663e-57 | -8.615850e-47 |
| Msa1073900 | Msa1302380 | 0.803102 | 4.091959e-49 | -8.615850e-47 |
| Msa1073900 | Msa1332590 | 0.826440 | 2.709303e-54 | -8.615850e-47 |
| Msa1073900 | Msa1356440 | 0.831970 | 1.234223e-55 | -8.615850e-47 |
| Msa1073900 | Msa1358250 | 0.849801 | 2.561240e-60 | -8.615850e-47 |
| Msa1073900 | Msa1380410 | 0.804706 | 1.899511e-49 | -8.615850e-47 |
| Msa1073900 | Msa1386780 | 0.817147 | 3.834941e-52 | -8.615850e-47 |
| Msa1073900 | Msa1387200 | 0.801050 | 1.081114e-48 | -8.615850e-47 |
| Msa1073900 | Msa1392780 | 0.824855 | 6.435968e-54 | -8.615850e-47 |
| Msa1073900 | Msa1394290 | 0.857375 | 1.704097e-62 | -8.615850e-47 |
| Msa1073900 | Msa1419870 | 0.821428 | 4.059214e-53 | -8.615850e-47 |
| Msa1073900 | Msa1440000 | 0.821503 | 3.900009e-53 | -8.615850e-47 |
| Msa1073900 | Msa1444310 | 0.820397 | 7.011032e-53 | -8.615850e-47 |
| Msa1073900 | Msa1457920 | 0.823256 | 1.527329e-53 | -8.615850e-47 |
| Msa0262310 | Msa1073900 | 0.809803 | 1.579576e-50 | -8.615850e-47 |
| Msa0300120 | Msa1073900 | 0.800717 | 1.264281e-48 | -8.615850e-47 |
| Msa0337240 | Msa1073900 | 0.813461 | 2.530528e-51 | -8.615850e-47 |
| Msa0337650 | Msa1073900 | 0.835811 | 1.350074e-56 | -8.615850e-47 |
| Msa0360990 | Msa1073900 | 0.810830 | 9.482184e-51 | -8.615850e-47 |
| Msa0497490 | Msa1073900 | 0.813008 | 3.181284e-51 | -8.615850e-47 |
| Msa0518390 | Msa1073900 | 0.802910 | 4.482376e-49 | -8.615850e-47 |
| Msa0546360 | Msa1073900 | 0.811542 | 6.645939e-51 | -8.615850e-47 |
| Msa0556790 | Msa1073900 | 0.803015 | 4.264849e-49 | -8.615850e-47 |
| Msa0560470 | Msa1073900 | 0.803697 | 3.080588e-49 | -8.615850e-47 |
| Msa0589190 | Msa1073900 | 0.800201 | 1.610797e-48 | -8.615850e-47 |
| Msa0847080 | Msa1073900 | 0.801703 | 7.944247e-49 | -8.615850e-47 |
| Msa0852390 | Msa1073900 | 0.808836 | 2.546933e-50 | -8.615850e-47 |
| Msa0902760 | Msa1073900 | 0.824898 | 6.288773e-54 | -8.615850e-47 |
| Msa0926460 | Msa1073900 | 0.811410 | 7.100478e-51 | -8.615850e-47 |
| Msa0965860 | Msa1073900 | 0.800146 | 1.652836e-48 | -8.615850e-47 |
| Msa0968590 | Msa1073900 | 0.800007 | 1.763424e-48 | -8.615850e-47 |
| Msa0970030 | Msa1073900 | 0.832912 | 7.208621e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073900 | MtrunA17_Chr7g0256931 | 97.963 | 589 | 11 | 1 | 1 | 589 | 1 | 588 | 0.0 | 1190 |
| Msa1073900 | MtrunA17_Chr7g0247101 | 64.000 | 425 | 102 | 7 | 18 | 435 | 20 | 400 | 2.68e-174 | 499 |
| Msa1073900 | MtrunA17_Chr7g0218551 | 59.819 | 443 | 103 | 6 | 53 | 442 | 3 | 423 | 3.05e-169 | 487 |
| Msa1073900 | MtrunA17_Chr7g0218541 | 45.665 | 173 | 45 | 5 | 436 | 589 | 11 | 153 | 2.82e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073900 | AT5G37350.1 | 71.889 | 434 | 98 | 4 | 45 | 476 | 39 | 450 | 0.0 | 646 |
| Msa1073900 | AT2G24990.1 | 71.659 | 434 | 99 | 4 | 45 | 476 | 40 | 451 | 0.0 | 645 |
| Msa1073900 | AT5G37350.2 | 77.580 | 281 | 58 | 1 | 196 | 476 | 29 | 304 | 3.26e-159 | 461 |
Find 127 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATATGATGTGAGAATTTC+TGG | 0.159440 | 7_2:-71547117 | None:intergenic |
| ATTGCAAGTTCTTGAATTTC+AGG | 0.214526 | 7_2:-71549001 | None:intergenic |
| GAATAAAACCATGCGCGTTC+TGG | 0.225461 | 7_2:-71548515 | None:intergenic |
| TTCCTTCTCAGTTGAAATAA+TGG | 0.236747 | 7_2:-71548789 | None:intergenic |
| TAGTGTCTATCTGGTCTTTA+TGG | 0.237081 | 7_2:-71552790 | None:intergenic |
| TTGATTTATCAGACGATTAC+TGG | 0.253766 | 7_2:+71552426 | Msa1073900:CDS |
| CTTCCTTCCCATTCCTCTAA+TGG | 0.254775 | 7_2:-71547148 | None:intergenic |
| ATCCTGGTTATGGAATTTAT+TGG | 0.265863 | 7_2:+71549703 | Msa1073900:CDS |
| GTCTAATGCGTCGTCGATTT+CGG | 0.283612 | 7_2:-71546966 | None:intergenic |
| CTCAGTTGAAATAATGGATT+TGG | 0.284290 | 7_2:-71548783 | None:intergenic |
| TTAACATCGACTAGTGTCTT+TGG | 0.299313 | 7_2:-71552351 | None:intergenic |
| GTTGTGTTGTTCAATTTGTT+TGG | 0.305266 | 7_2:-71546885 | None:intergenic |
| TATTCGCGCTTCTCCATTAG+AGG | 0.306192 | 7_2:+71547135 | Msa1073900:CDS |
| TGTTATGGCCATCTGTTTGT+AGG | 0.307096 | 7_2:+71552819 | Msa1073900:three_prime_UTR |
| ATAACGAGCGGCAAAGAAAC+TGG | 0.321898 | 7_2:+71552399 | Msa1073900:CDS |
| TGATGCTGTAGATAGTTATT+TGG | 0.321965 | 7_2:+71551059 | Msa1073900:CDS |
| GTTTCTCTACACATTCAAAA+TGG | 0.328575 | 7_2:+71552991 | Msa1073900:three_prime_UTR |
| TCATCTATAGTATTTGATTT+CGG | 0.331332 | 7_2:-71552504 | None:intergenic |
| CGCTTCTCCATTAGAGGAAT+GGG | 0.344069 | 7_2:+71547141 | Msa1073900:CDS |
| CATGGGCAGAAAAGGAATTC+AGG | 0.345176 | 7_2:+71549279 | Msa1073900:CDS |
| TGGTGACCACCGTGAGCATT+GGG | 0.356008 | 7_2:-71547055 | None:intergenic |
| TAGACACTACTTATTTGTTA+TGG | 0.357377 | 7_2:+71552804 | Msa1073900:exon |
| ACAAATAAGTAGTGTCTATC+TGG | 0.368770 | 7_2:-71552799 | None:intergenic |
| GGAGATTACCGGTTTAGAAA+TGG | 0.374144 | 7_2:+71549221 | Msa1073900:CDS |
| GAGGTTACATATCCTGGTTA+TGG | 0.374853 | 7_2:+71549693 | Msa1073900:CDS |
| AATATACAAAACATCTGTTC+TGG | 0.387997 | 7_2:+71549027 | Msa1073900:CDS |
| TTGTGTTGTTCAATTTGTTT+GGG | 0.388440 | 7_2:-71546884 | None:intergenic |
| AAGAAAGAAGAAATTGTCTA+AGG | 0.389584 | 7_2:+71552767 | Msa1073900:CDS |
| ATTATATCAGAAGTGCAAAT+TGG | 0.401342 | 7_2:+71550629 | Msa1073900:CDS |
| TCAAGAGCATGAGGATGGTC+AGG | 0.401851 | 7_2:-71550815 | None:intergenic |
| ATTTATCTTTAGACAAGTTA+CGG | 0.416019 | 7_2:+71550044 | Msa1073900:CDS |
| AATAAAACCATGCGCGTTCT+GGG | 0.416564 | 7_2:-71548514 | None:intergenic |
| ACGGTACTTCTCTTAGTTCA+TGG | 0.416655 | 7_2:+71547029 | Msa1073900:CDS |
| TTTATCTTTAGACAAGTTAC+GGG | 0.421343 | 7_2:+71550045 | Msa1073900:CDS |
| AATTTCAGGTTCTTCACCAT+TGG | 0.421989 | 7_2:-71548987 | None:intergenic |
| CCTTCTGAGGTTACATATCC+TGG | 0.424420 | 7_2:+71549687 | Msa1073900:CDS |
| ATTTACCATCGGAGATGGTA+TGG | 0.425845 | 7_2:-71552530 | None:intergenic |
| ATGAATGGATGCATTTCAAC+TGG | 0.426635 | 7_2:+71548568 | Msa1073900:CDS |
| TTATAATACAGTCAAAGATA+TGG | 0.426750 | 7_2:+71552863 | Msa1073900:three_prime_UTR |
| TGGGTTCAGTAGTTTGATGA+AGG | 0.428001 | 7_2:-71546865 | None:intergenic |
| GAGATTACCGGTTTAGAAAT+GGG | 0.428853 | 7_2:+71549222 | Msa1073900:CDS |
| GGTAAATCTAACCTCTTAGA+AGG | 0.430892 | 7_2:+71552546 | Msa1073900:CDS |
| AGGAATTCAGGAATCTTAAG+AGG | 0.433465 | 7_2:+71549291 | Msa1073900:CDS |
| GGTTAAAACATGGGCAGAAA+AGG | 0.433804 | 7_2:+71549271 | Msa1073900:CDS |
| GATATGTGCAAGGAGATTAC+CGG | 0.437361 | 7_2:+71549210 | Msa1073900:CDS |
| ACTGTTACTACCGCGATTCG+TGG | 0.437450 | 7_2:+71547193 | Msa1073900:CDS |
| GTGGTGACCACCGTGAGCAT+TGG | 0.449291 | 7_2:-71547056 | None:intergenic |
| TGTAGATAGTTATTTGGAAA+AGG | 0.449525 | 7_2:+71551065 | Msa1073900:CDS |
| TGAGAATTTCTGGTTACGAT+TGG | 0.456200 | 7_2:-71547107 | None:intergenic |
| GGCTAAAGGAAGAAGGAATC+AGG | 0.457038 | 7_2:+71549650 | Msa1073900:intron |
| TGCAGTACCCATTTCTAAAC+CGG | 0.461909 | 7_2:-71549229 | None:intergenic |
| TGACCGTGCTACTGTTGAAC+AGG | 0.466022 | 7_2:+71547264 | Msa1073900:CDS |
| TTCATGCAGGAAAGGATGGC+TGG | 0.469011 | 7_2:+71549996 | Msa1073900:intron |
| TTGTCTTCTTCGTTCTCACC+AGG | 0.469285 | 7_2:-71552585 | None:intergenic |
| CTCTGCAGATACATCTCCTC+TGG | 0.481428 | 7_2:-71551185 | None:intergenic |
| ATATGTAACCTCAGAAGGAT+TGG | 0.485948 | 7_2:-71549682 | None:intergenic |
| AAATCGACGACGCATTAGAC+TGG | 0.486235 | 7_2:+71546969 | Msa1073900:CDS |
| ATCCATTATTTCAACTGAGA+AGG | 0.497752 | 7_2:+71548787 | Msa1073900:CDS |
| GCGCTTCTCCATTAGAGGAA+TGG | 0.503972 | 7_2:+71547140 | Msa1073900:CDS |
| TTTGCCTAAGTGCAGGCTAA+AGG | 0.504982 | 7_2:+71549636 | Msa1073900:intron |
| AGTTGAAATAATGGATTTGG+TGG | 0.505903 | 7_2:-71548780 | None:intergenic |
| AAGCATATATAAGGAGATGT+TGG | 0.506614 | 7_2:+71552909 | Msa1073900:three_prime_UTR |
| TCGTGGAAGTGTTCGAGAGA+TGG | 0.508074 | 7_2:+71547210 | Msa1073900:CDS |
| GGGTTCAGTAGTTTGATGAA+GGG | 0.510500 | 7_2:-71546864 | None:intergenic |
| AGTGTTCGAGAGATGGCTAT+TGG | 0.517073 | 7_2:+71547217 | Msa1073900:CDS |
| ATATAATATACTCTATTATG+AGG | 0.518781 | 7_2:+71550671 | Msa1073900:CDS |
| TTATTCAAGATGCTCAATAG+AGG | 0.518809 | 7_2:+71548532 | Msa1073900:CDS |
| TTGGTTCATGCAGGAAAGGA+TGG | 0.522683 | 7_2:+71549992 | Msa1073900:intron |
| TCCATTGTTGTGCTATGAAG+CGG | 0.523352 | 7_2:-71546821 | None:intergenic |
| GGTTCAGTAGTTTGATGAAG+GGG | 0.524163 | 7_2:-71546863 | None:intergenic |
| TATTATTGATGTTTCTCAAG+CGG | 0.533785 | 7_2:+71550787 | Msa1073900:CDS |
| CTTCCTCTGTTTGATCAAAG+TGG | 0.535424 | 7_2:+71553023 | Msa1073900:three_prime_UTR |
| GTTAGATTTACCATCGGAGA+TGG | 0.537264 | 7_2:-71552535 | None:intergenic |
| CCAGGATATGTAACCTCAGA+AGG | 0.537592 | 7_2:-71549687 | None:intergenic |
| TGCAGACTCGGTATTTGCAC+AGG | 0.538077 | 7_2:+71551216 | Msa1073900:CDS |
| CTAGCAACTTTCTTATCAAG+CGG | 0.538853 | 7_2:-71552657 | None:intergenic |
| AGAGGATGAGATTGCAGACT+CGG | 0.539617 | 7_2:+71551204 | Msa1073900:CDS |
| AAGAGGAGAAAAGAGAAGCC+AGG | 0.540794 | 7_2:+71552715 | Msa1073900:CDS |
| CCTCGGCATCACCTTCTAAG+AGG | 0.545253 | 7_2:-71552557 | None:intergenic |
| TCATGCAGGAAAGGATGGCT+GGG | 0.558758 | 7_2:+71549997 | Msa1073900:intron |
| TGGATGCATTTCAACTGGAA+AGG | 0.560109 | 7_2:+71548573 | Msa1073900:CDS |
| GGTTTAGAAATGGGTACTGC+AGG | 0.560868 | 7_2:+71549231 | Msa1073900:CDS |
| AACCTCAGAAGGATTGGAGT+AGG | 0.571899 | 7_2:-71549676 | None:intergenic |
| AAGTGCAGGCTAAAGGAAGA+AGG | 0.574238 | 7_2:+71549643 | Msa1073900:intron |
| GATTATTACGATTCAATCGA+CGG | 0.575190 | 7_2:+71547010 | Msa1073900:CDS |
| AATTGATCCCAGAACGCGCA+TGG | 0.576022 | 7_2:+71548507 | Msa1073900:CDS |
| TCATGGCGCCCCAATGCTCA+CGG | 0.584054 | 7_2:+71547046 | Msa1073900:CDS |
| ACCTCAGAAGGATTGGAGTA+GGG | 0.584913 | 7_2:-71549675 | None:intergenic |
| GATAGAGATAGATATGTGCA+AGG | 0.584930 | 7_2:+71549200 | Msa1073900:CDS |
| TTTACCATCGGAGATGGTAT+GGG | 0.588972 | 7_2:-71552529 | None:intergenic |
| AAGTTGCTAGAAAAGAAGCT+AGG | 0.593999 | 7_2:+71552670 | Msa1073900:CDS |
| GTTCTCACCAGGTTGAGCCT+CGG | 0.594021 | 7_2:-71552574 | None:intergenic |
| CGCAGAAAATCAAGAGCATG+AGG | 0.595997 | 7_2:-71550824 | None:intergenic |
| GAAAATCAAGAGCATGAGGA+TGG | 0.599933 | 7_2:-71550820 | None:intergenic |
| ATTCAAAACCTACAAACAGA+TGG | 0.600082 | 7_2:-71552827 | None:intergenic |
| GGTGATGCCGAGGCTCAACC+TGG | 0.600811 | 7_2:+71552567 | Msa1073900:CDS |
| TCTTTAGACAAGTTACGGGA+GGG | 0.601583 | 7_2:+71550049 | Msa1073900:CDS |
| TAAGAGGTTAGATTTACCAT+CGG | 0.602693 | 7_2:-71552541 | None:intergenic |
| ATCTTTAGACAAGTTACGGG+AGG | 0.603025 | 7_2:+71550048 | Msa1073900:CDS |
| TACCAATAAATTCCATAACC+AGG | 0.604078 | 7_2:-71549705 | None:intergenic |
| TCGAACACTTCCACGAATCG+CGG | 0.608176 | 7_2:-71547203 | None:intergenic |
| TGCATCTTTGAGACGTGGAG+CGG | 0.613221 | 7_2:-71550020 | None:intergenic |
| TTCTGGTTACGATTGGAGAG+AGG | 0.614276 | 7_2:-71547100 | None:intergenic |
| GGTGTGTTTCAAGATATGAA+TGG | 0.617010 | 7_2:+71548553 | Msa1073900:CDS |
| CAGGAAAACTAAACTCCCCA+AGG | 0.622478 | 7_2:+71552734 | Msa1073900:CDS |
| GCCGCTTCATAGCACAACAA+TGG | 0.622514 | 7_2:+71546820 | Msa1073900:exon |
| TCTCATGCCATCAAAACCAA+TGG | 0.626781 | 7_2:+71548971 | Msa1073900:CDS |
| CGATGTTAAGAATGTTGAGG+AGG | 0.628194 | 7_2:+71552365 | Msa1073900:CDS |
| GCCCTACTCCAATCCTTCTG+AGG | 0.629266 | 7_2:+71549674 | Msa1073900:CDS |
| GATTCCCATACCATCTCCGA+TGG | 0.638691 | 7_2:+71552525 | Msa1073900:CDS |
| CCTCTTAGAAGGTGATGCCG+AGG | 0.639251 | 7_2:+71552557 | Msa1073900:CDS |
| TTTAGATAATTGTTGCAATG+CGG | 0.642500 | 7_2:+71550604 | Msa1073900:intron |
| GTTACGGGAGGGCTATGTTG+AGG | 0.650542 | 7_2:+71550060 | Msa1073900:CDS |
| AGTCGATGTTAAGAATGTTG+AGG | 0.652338 | 7_2:+71552362 | Msa1073900:CDS |
| TATGAAGCGGCAAACAACAA+TGG | 0.654333 | 7_2:-71546808 | None:intergenic |
| CAGAGGAGATGTATCTGCAG+AGG | 0.654428 | 7_2:+71551186 | Msa1073900:CDS |
| CAAGAGCATGAGGATGGTCA+GGG | 0.660370 | 7_2:-71550814 | None:intergenic |
| GGTGACCACCGTGAGCATTG+GGG | 0.668604 | 7_2:-71547054 | None:intergenic |
| AAATCTGCATCTTTGAGACG+TGG | 0.669033 | 7_2:-71550025 | None:intergenic |
| CAGAAGTGCAAATTGGTGCA+TGG | 0.672679 | 7_2:+71550636 | Msa1073900:CDS |
| TTACCTGTTCAACAGTAGCA+CGG | 0.674141 | 7_2:-71547267 | None:intergenic |
| ACACCACTTTGATCAAACAG+AGG | 0.679351 | 7_2:-71553026 | None:intergenic |
| TCTCCATTAGAGGAATGGGA+AGG | 0.697543 | 7_2:+71547145 | Msa1073900:CDS |
| TGGCGCCCCAATGCTCACGG+TGG | 0.708562 | 7_2:+71547049 | Msa1073900:CDS |
| GATGTACAACGTATAACGAG+CGG | 0.720993 | 7_2:+71552387 | Msa1073900:CDS |
| GCAGCGTTGAAGAATGAGAG+TGG | 0.722333 | 7_2:-71547075 | None:intergenic |
| AGAGTATATTATATTCACTG+AGG | 0.726345 | 7_2:-71550662 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACAAAAAATTATCTTTA+GGG | - | chr7_2:71547832-71547851 | None:intergenic | 10.0% |
| !! | TAATACAAAAAATTATCTTT+AGG | - | chr7_2:71547833-71547852 | None:intergenic | 10.0% |
| !!! | TATACTTTTATAAATTCTAA+AGG | + | chr7_2:71550532-71550551 | Msa1073900:intron | 10.0% |
| !! | TATAATCTTAAAAAAATTTC+AGG | + | chr7_2:71551144-71551163 | Msa1073900:intron | 10.0% |
| !!! | TTTATGTCATTTCATATTTA+GGG | - | chr7_2:71547634-71547653 | None:intergenic | 15.0% |
| !!! | TACTATAATCTTTTAATTCA+TGG | + | chr7_2:71549147-71549166 | Msa1073900:intron | 15.0% |
| !! | CAGAAAAAATATAATACAAT+TGG | - | chr7_2:71549523-71549542 | None:intergenic | 15.0% |
| !!! | ATATTTTTTCTGTTGTTAAA+TGG | + | chr7_2:71549531-71549550 | Msa1073900:intron | 15.0% |
| !!! | TATTTTTTCTGTTGTTAAAT+GGG | + | chr7_2:71549532-71549551 | Msa1073900:intron | 15.0% |
| !!! | ATGTTTGTTATATTGAATAT+CGG | + | chr7_2:71549790-71549809 | Msa1073900:intron | 15.0% |
| !! | ATTTGATTATAAAAGAAAGA+TGG | + | chr7_2:71549828-71549847 | Msa1073900:intron | 15.0% |
| !! | TTTGATTATAAAAGAAAGAT+GGG | + | chr7_2:71549829-71549848 | Msa1073900:intron | 15.0% |
| !! | AAGTAAATTAAAGTAATGTA+TGG | + | chr7_2:71549852-71549871 | Msa1073900:intron | 15.0% |
| !! | ATATAATATACTCTATTATG+AGG | + | chr7_2:71550671-71550690 | Msa1073900:CDS | 15.0% |
| !! | TATAAAATATAAACATCCAA+AGG | - | chr7_2:71550705-71550724 | None:intergenic | 15.0% |
| !!! | TTATTTGTTCTTTATTTATC+AGG | + | chr7_2:71550754-71550773 | Msa1073900:intron | 15.0% |
| !!! | TATTTGTTCTTTATTTATCA+GGG | + | chr7_2:71550755-71550774 | Msa1073900:intron | 15.0% |
| !! | TTGAAAAACAAAAACTTATT+AGG | - | chr7_2:71551860-71551879 | None:intergenic | 15.0% |
| !! | TTATAAAGAAATAATGAACT+TGG | - | chr7_2:71552187-71552206 | None:intergenic | 15.0% |
| !!! | TTTTGTTTATCTTTCAATTT+TGG | + | chr7_2:71552938-71552957 | Msa1073900:three_prime_UTR | 15.0% |
| !!! | CTTTATGTCATTTCATATTT+AGG | - | chr7_2:71547635-71547654 | None:intergenic | 20.0% |
| !! | TTTCAATTAATTGGTAAAAC+TGG | + | chr7_2:71547686-71547705 | Msa1073900:intron | 20.0% |
| !! | TTCAATTAATTGGTAAAACT+GGG | + | chr7_2:71547687-71547706 | Msa1073900:intron | 20.0% |
| !!! | ATATCTCTTATAGTTTTTCT+AGG | - | chr7_2:71548184-71548203 | None:intergenic | 20.0% |
| !! | TTGTTTATGATAGAACATTA+TGG | + | chr7_2:71548242-71548261 | Msa1073900:intron | 20.0% |
| !!! | TTCTGATTTTTATTTCTTAG+TGG | + | chr7_2:71548380-71548399 | Msa1073900:intron | 20.0% |
| !! | TGAAACAAACATGTAAATAA+AGG | - | chr7_2:71548619-71548638 | None:intergenic | 20.0% |
| !!! | TTTTTATAATCTTTGGCTTA+AGG | + | chr7_2:71548670-71548689 | Msa1073900:intron | 20.0% |
| !!! | TACTCTTTTAATTTTCTAAC+AGG | + | chr7_2:71548742-71548761 | Msa1073900:intron | 20.0% |
| !! | GAAACAAACATGTAAATAAA+AGG | - | chr7_2:71548618-71548637 | None:intergenic | 20.0% |
| !!! | TTATTTTTTGTTGTGATCTT+TGG | + | chr7_2:71548858-71548877 | Msa1073900:intron | 20.0% |
| !! | TTAAAAAGAATTACTTACAC+AGG | + | chr7_2:71549123-71549142 | Msa1073900:intron | 20.0% |
| !! | TTTATAATGTGATTGATATC+AGG | + | chr7_2:71549177-71549196 | Msa1073900:intron | 20.0% |
| !! | TTATAATGTGATTGATATCA+GGG | + | chr7_2:71549178-71549197 | Msa1073900:intron | 20.0% |
| !!! | TAATTTTCTTTTTCTTCTGT+TGG | + | chr7_2:71549361-71549380 | Msa1073900:intron | 20.0% |
| !! | TGAGAGAAATTGATTATAAT+TGG | - | chr7_2:71549767-71549786 | None:intergenic | 20.0% |
| !! | AAGAAAATATAATCTCATTC+TGG | + | chr7_2:71549902-71549921 | Msa1073900:intron | 20.0% |
| !! | ATTTATCTTTAGACAAGTTA+CGG | + | chr7_2:71550044-71550063 | Msa1073900:CDS | 20.0% |
| !!! | TTCTGTTATGCTAATTTTTT+AGG | + | chr7_2:71550559-71550578 | Msa1073900:intron | 20.0% |
| !! | AACACTGAAGAAATTAATTT+AGG | + | chr7_2:71551301-71551320 | Msa1073900:intron | 20.0% |
| !! | TATAGATATTTGAATTGTTG+TGG | + | chr7_2:71551333-71551352 | Msa1073900:intron | 20.0% |
| !! | AAAACAAAAACTTATTAGGT+CGG | - | chr7_2:71551856-71551875 | None:intergenic | 20.0% |
| !!! | AGTTTTTGTTTTTCAAAAAC+TGG | + | chr7_2:71551864-71551883 | Msa1073900:intron | 20.0% |
| !!! | GTTTTTGTTTTTCAAAAACT+GGG | + | chr7_2:71551865-71551884 | Msa1073900:intron | 20.0% |
| !! | TAAAATCTCAATCATGATTT+GGG | - | chr7_2:71552056-71552075 | None:intergenic | 20.0% |
| !! | TTAAAATCTCAATCATGATT+TGG | - | chr7_2:71552057-71552076 | None:intergenic | 20.0% |
| !!! | TCATCTATAGTATTTGATTT+CGG | - | chr7_2:71552507-71552526 | None:intergenic | 20.0% |
| !! | TAGGAAAGAAAATAAAAAGA+AGG | + | chr7_2:71552689-71552708 | Msa1073900:CDS | 20.0% |
| !! | TTATAATACAGTCAAAGATA+TGG | + | chr7_2:71552863-71552882 | Msa1073900:three_prime_UTR | 20.0% |
| !!! | TTGTTTTCTAAGCATATATA+AGG | + | chr7_2:71552900-71552919 | Msa1073900:three_prime_UTR | 20.0% |
| !!! | TGTGTTATTCAATTTTTATG+TGG | + | chr7_2:71552961-71552980 | Msa1073900:three_prime_UTR | 20.0% |
| !!! | GTGTTATTCAATTTTTATGT+GGG | + | chr7_2:71552962-71552981 | Msa1073900:three_prime_UTR | 20.0% |
| !! | TTGTGTTGTTCAATTTGTTT+GGG | - | chr7_2:71546887-71546906 | None:intergenic | 25.0% |
| ! | TGTATTAGAAATGACGAATT+TGG | + | chr7_2:71547846-71547865 | Msa1073900:intron | 25.0% |
| ! | ACAATATTAGAGAGAGATTT+GGG | + | chr7_2:71548023-71548042 | Msa1073900:intron | 25.0% |
| ! | GAAAATGAATACAACAAACA+AGG | - | chr7_2:71548448-71548467 | None:intergenic | 25.0% |
| ! | AAACATGTAAATAAAGGTTC+TGG | - | chr7_2:71548613-71548632 | None:intergenic | 25.0% |
| ! | AACATGTAAATAAAAGGTTC+TGG | - | chr7_2:71548827-71548846 | None:intergenic | 25.0% |
| !!! | TCCCTTTTTAATTTTCTAAC+AGG | + | chr7_2:71548940-71548959 | Msa1073900:intron | 25.0% |
| ! | GCCTGTTAGAAAATTAAAAA+GGG | - | chr7_2:71548944-71548963 | None:intergenic | 25.0% |
| ! | TGCCTGTTAGAAAATTAAAA+AGG | - | chr7_2:71548747-71548766 | None:intergenic | 25.0% |
| ! | AATATACAAAACATCTGTTC+TGG | + | chr7_2:71549027-71549046 | Msa1073900:CDS | 25.0% |
| !!! | TACCTTTTTGTTTCTTCTTT+TGG | + | chr7_2:71549335-71549354 | Msa1073900:intron | 25.0% |
| ! | ATCCAAAAGAAGAAACAAAA+AGG | - | chr7_2:71549340-71549359 | None:intergenic | 25.0% |
| ! | ATACAATTGGAAAAAAACTG+TGG | - | chr7_2:71549510-71549529 | None:intergenic | 25.0% |
| ! | TTTATCTTTAGACAAGTTAC+GGG | + | chr7_2:71550045-71550064 | Msa1073900:CDS | 25.0% |
| ! | TTTCTTTGGTATTATGTTGT+TGG | + | chr7_2:71550154-71550173 | Msa1073900:intron | 25.0% |
| ! | TTCTTTGGTATTATGTTGTT+GGG | + | chr7_2:71550155-71550174 | Msa1073900:intron | 25.0% |
| !! | TTAATATAAGGTTCCTGTTT+TGG | + | chr7_2:71550183-71550202 | Msa1073900:intron | 25.0% |
| ! | TACAAAATGTTGTTAAACAG+CGG | + | chr7_2:71550330-71550349 | Msa1073900:intron | 25.0% |
| ! | CTTAATATTCCTCTATGATA+CGG | - | chr7_2:71550375-71550394 | None:intergenic | 25.0% |
| ! | TTTAGATAATTGTTGCAATG+CGG | + | chr7_2:71550604-71550623 | Msa1073900:intron | 25.0% |
| !! | ATTATATCAGAAGTGCAAAT+TGG | + | chr7_2:71550629-71550648 | Msa1073900:CDS | 25.0% |
| ! | AGAGTATATTATATTCACTG+AGG | - | chr7_2:71550665-71550684 | None:intergenic | 25.0% |
| !! | CAGGATTTCTTTAAAAAACA+TGG | + | chr7_2:71550976-71550995 | Msa1073900:intron | 25.0% |
| !! | TTCTTTAAAAAACATGGTGT+AGG | + | chr7_2:71550982-71551001 | Msa1073900:CDS | 25.0% |
| ! | TGTAGATAGTTATTTGGAAA+AGG | + | chr7_2:71551065-71551084 | Msa1073900:CDS | 25.0% |
| !! | TATGTCATTGTTTTCATTCT+CGG | + | chr7_2:71551101-71551120 | Msa1073900:intron | 25.0% |
| ! | AGTTCATAAATAACCATAGA+AGG | + | chr7_2:71551722-71551741 | Msa1073900:intron | 25.0% |
| ! | AAAGAAATAATGAACTTGGA+GGG | - | chr7_2:71552183-71552202 | None:intergenic | 25.0% |
| ! | TAAAGAAATAATGAACTTGG+AGG | - | chr7_2:71552184-71552203 | None:intergenic | 25.0% |
| ! | AAATAAAAAGAAGGTGAAAG+AGG | + | chr7_2:71552698-71552717 | Msa1073900:CDS | 25.0% |
| ! | AAGAAAGAAGAAATTGTCTA+AGG | + | chr7_2:71552767-71552786 | Msa1073900:CDS | 25.0% |
| !! | TAGACACTACTTATTTGTTA+TGG | + | chr7_2:71552804-71552823 | Msa1073900:exon | 25.0% |
| ! | GTTGTGTTGTTCAATTTGTT+TGG | - | chr7_2:71546888-71546907 | None:intergenic | 30.0% |
| GATTATTACGATTCAATCGA+CGG | + | chr7_2:71547010-71547029 | Msa1073900:CDS | 30.0% | |
| GAATATGATGTGAGAATTTC+TGG | - | chr7_2:71547120-71547139 | None:intergenic | 30.0% | |
| TGATGAACTTATAGCAGATA+AGG | + | chr7_2:71547334-71547353 | Msa1073900:intron | 30.0% | |
| CCGAACACTAAAAATTCAAT+CGG | - | chr7_2:71547363-71547382 | None:intergenic | 30.0% | |
| !!! | CCGATTGAATTTTTAGTGTT+CGG | + | chr7_2:71547360-71547379 | Msa1073900:intron | 30.0% |
| TTAGTGTTCGGTAAAATTAG+TGG | + | chr7_2:71547372-71547391 | Msa1073900:intron | 30.0% | |
| !! | GCTCATTTTTGAGCTATTTA+GGG | - | chr7_2:71547598-71547617 | None:intergenic | 30.0% |
| TTGGTAAAACTGGGAAAAAA+AGG | + | chr7_2:71547696-71547715 | Msa1073900:intron | 30.0% | |
| ATAAGCTTGTGAGAAAATGA+CGG | + | chr7_2:71547772-71547791 | Msa1073900:intron | 30.0% | |
| !! | AAGTTTTGTGTTAGTTGTTG+TGG | + | chr7_2:71547890-71547909 | Msa1073900:intron | 30.0% |
| TTAGTTGTTGTGGTTTAACA+TGG | + | chr7_2:71547900-71547919 | Msa1073900:intron | 30.0% | |
| TTTCTATGCACAAAAGAAGA+GGG | - | chr7_2:71547926-71547945 | None:intergenic | 30.0% | |
| GACAATATTAGAGAGAGATT+TGG | + | chr7_2:71548022-71548041 | Msa1073900:intron | 30.0% | |
| CAATATTAGAGAGAGATTTG+GGG | + | chr7_2:71548024-71548043 | Msa1073900:intron | 30.0% | |
| ACGTATACTTGAAAAAATGG+TGG | + | chr7_2:71548051-71548070 | Msa1073900:intron | 30.0% | |
| ! | TTGAAAAAATGGTGGAAAAG+AGG | + | chr7_2:71548059-71548078 | Msa1073900:intron | 30.0% |
| !! | GACTTGTACATTTTCTAGTA+AGG | + | chr7_2:71548110-71548129 | Msa1073900:intron | 30.0% |
| TTGTTGGAAATGATGAAATC+TGG | + | chr7_2:71548324-71548343 | Msa1073900:intron | 30.0% | |
| !! | TTATGGCTTGCCTTTTTAAA+AGG | + | chr7_2:71548411-71548430 | Msa1073900:intron | 30.0% |
| !! | AACCTCAAGACCTTTTAAAA+AGG | - | chr7_2:71548424-71548443 | None:intergenic | 30.0% |
| TTATTCAAGATGCTCAATAG+AGG | + | chr7_2:71548532-71548551 | Msa1073900:CDS | 30.0% | |
| !! | TTTGGCTTAAGGTTTTATGA+TGG | + | chr7_2:71548681-71548700 | Msa1073900:intron | 30.0% |
| !! | TTGGCTTAAGGTTTTATGAT+GGG | + | chr7_2:71548682-71548701 | Msa1073900:intron | 30.0% |
| !! | AGTTGAAATAATGGATTTGG+TGG | - | chr7_2:71548783-71548802 | None:intergenic | 30.0% |
| !! | CTCAGTTGAAATAATGGATT+TGG | - | chr7_2:71548786-71548805 | None:intergenic | 30.0% |
| ATCCATTATTTCAACTGAGA+AGG | + | chr7_2:71548787-71548806 | Msa1073900:CDS | 30.0% | |
| TTCCTTCTCAGTTGAAATAA+TGG | - | chr7_2:71548792-71548811 | None:intergenic | 30.0% | |
| TTGTTGTGATCTTTGGATTA+CGG | + | chr7_2:71548865-71548884 | Msa1073900:intron | 30.0% | |
| ! | ATCTTTGGATTACGGTTTTA+TGG | + | chr7_2:71548873-71548892 | Msa1073900:intron | 30.0% |
| ATTGCAAGTTCTTGAATTTC+AGG | - | chr7_2:71549004-71549023 | None:intergenic | 30.0% | |
| !!! | CATGTTTTAACCATTTTTCG+GGG | - | chr7_2:71549263-71549282 | None:intergenic | 30.0% |
| !!! | CCATGTTTTAACCATTTTTC+GGG | - | chr7_2:71549264-71549283 | None:intergenic | 30.0% |
| !!! | CCCATGTTTTAACCATTTTT+CGG | - | chr7_2:71549265-71549284 | None:intergenic | 30.0% |
| CCGAAAAATGGTTAAAACAT+GGG | + | chr7_2:71549262-71549281 | Msa1073900:CDS | 30.0% | |
| AAAGAAGAATCGAAGAAAGA+CGG | + | chr7_2:71549468-71549487 | Msa1073900:intron | 30.0% | |
| AATTGGAAAAAAACTGTGGA+TGG | - | chr7_2:71549506-71549525 | None:intergenic | 30.0% | |
| ATCCTGGTTATGGAATTTAT+TGG | + | chr7_2:71549703-71549722 | Msa1073900:CDS | 30.0% | |
| TACCAATAAATTCCATAACC+AGG | - | chr7_2:71549708-71549727 | None:intergenic | 30.0% | |
| ATCAGATTGTATCAAAATGC+AGG | - | chr7_2:71549741-71549760 | None:intergenic | 30.0% | |
| !! | GGTTTTTAACTGAAGTTCTT+TGG | + | chr7_2:71549964-71549983 | Msa1073900:intron | 30.0% |
| ! | CTGAAGTTCTTTGGTTATTT+TGG | + | chr7_2:71549973-71549992 | Msa1073900:intron | 30.0% |
| ATAGTCTAGTAAAGTTAGCA+TGG | + | chr7_2:71550100-71550119 | Msa1073900:intron | 30.0% | |
| ! | TTAGAATTTAGTTCGTTAGC+AGG | + | chr7_2:71550131-71550150 | Msa1073900:intron | 30.0% |
| TGTTGGGATGCTTTAATATA+AGG | + | chr7_2:71550171-71550190 | Msa1073900:intron | 30.0% | |
| ! | TCTAGCTTAGCAATAATTCT+AGG | - | chr7_2:71550226-71550245 | None:intergenic | 30.0% |
| TTGTCAAATAGCGATTATAG+TGG | + | chr7_2:71550247-71550266 | Msa1073900:intron | 30.0% | |
| TTGTACTAAATAGTGTATCG+CGG | - | chr7_2:71550315-71550334 | None:intergenic | 30.0% | |
| CGTATCATAGAGGAATATTA+AGG | + | chr7_2:71550373-71550392 | Msa1073900:intron | 30.0% | |
| ACAATTTATAGAGAGACACT+TGG | - | chr7_2:71550730-71550749 | None:intergenic | 30.0% | |
| !!! | TAAGTACTTGTTTTACTTGC+AGG | + | chr7_2:71550957-71550976 | Msa1073900:intron | 30.0% |
| TGATGCTGTAGATAGTTATT+TGG | + | chr7_2:71551059-71551078 | Msa1073900:CDS | 30.0% | |
| ! | TCAGGTGCAACAAAAAATTT+TGG | + | chr7_2:71551162-71551181 | Msa1073900:intron | 30.0% |
| !! | TGCTTTTTGTTTGAATGTGA+AGG | + | chr7_2:71551257-71551276 | Msa1073900:intron | 30.0% |
| !! | GCTTTTTGTTTGAATGTGAA+GGG | + | chr7_2:71551258-71551277 | Msa1073900:intron | 30.0% |
| !! | TACTTCTAGAAGCTTTTAGA+AGG | + | chr7_2:71551385-71551404 | Msa1073900:intron | 30.0% |
| AAAAAATGCTGTAAGCAGAA+AGG | + | chr7_2:71551416-71551435 | Msa1073900:intron | 30.0% | |
| !! | TTCTAGTTCCTATATCTTGA+GGG | - | chr7_2:71551466-71551485 | None:intergenic | 30.0% |
| TGAAAATTGAGATTCTACCT+AGG | + | chr7_2:71551561-71551580 | Msa1073900:intron | 30.0% | |
| TCATAAATAACCATAGAAGG+AGG | + | chr7_2:71551725-71551744 | Msa1073900:intron | 30.0% | |
| AGTTGTTATGCTTATACTGA+AGG | - | chr7_2:71552091-71552110 | None:intergenic | 30.0% | |
| !! | ACTAAAAGCACTAGTCATAT+TGG | + | chr7_2:71552254-71552273 | Msa1073900:intron | 30.0% |
| ATAAACATGTCAGAATAGAG+AGG | - | chr7_2:71552303-71552322 | None:intergenic | 30.0% | |
| TTGATTTATCAGACGATTAC+TGG | + | chr7_2:71552426-71552445 | Msa1073900:CDS | 30.0% | |
| ! | CTTTAGCTGATCATTTTGTA+GGG | - | chr7_2:71552484-71552503 | None:intergenic | 30.0% |
| TAAGAGGTTAGATTTACCAT+CGG | - | chr7_2:71552544-71552563 | None:intergenic | 30.0% | |
| ACAAATAAGTAGTGTCTATC+TGG | - | chr7_2:71552802-71552821 | None:intergenic | 30.0% | |
| ATTCAAAACCTACAAACAGA+TGG | - | chr7_2:71552830-71552849 | None:intergenic | 30.0% | |
| AAGCATATATAAGGAGATGT+TGG | + | chr7_2:71552909-71552928 | Msa1073900:three_prime_UTR | 30.0% | |
| GTTTCTCTACACATTCAAAA+TGG | + | chr7_2:71552991-71553010 | Msa1073900:three_prime_UTR | 30.0% | |
| !!! | TCTTCTTCGTTTTCAAGTTC+TGG | - | chr7_2:71546914-71546933 | None:intergenic | 35.0% |
| !! | TGAGAATTTCTGGTTACGAT+TGG | - | chr7_2:71547110-71547129 | None:intergenic | 35.0% |
| TGTTCGGTAAAATTAGTGGA+TGG | + | chr7_2:71547376-71547395 | Msa1073900:intron | 35.0% | |
| ! | GTTCGGTAAAATTAGTGGAT+GGG | + | chr7_2:71547377-71547396 | Msa1073900:intron | 35.0% |
| !! | GGCTCATTTTTGAGCTATTT+AGG | - | chr7_2:71547599-71547618 | None:intergenic | 35.0% |
| AAAAATGAGCCAATCCAAAC+TGG | + | chr7_2:71547608-71547627 | Msa1073900:intron | 35.0% | |
| ! | TTTCATATTTAGGGCCAGTT+TGG | - | chr7_2:71547625-71547644 | None:intergenic | 35.0% |
| ! | CTTTGTCGAATCTTTTGACA+TGG | - | chr7_2:71547873-71547892 | None:intergenic | 35.0% |
| CTTTCTATGCACAAAAGAAG+AGG | - | chr7_2:71547927-71547946 | None:intergenic | 35.0% | |
| ! | CTCTTCTTTTGTGCATAGAA+AGG | + | chr7_2:71547925-71547944 | Msa1073900:intron | 35.0% |
| GTGGTAAGGTTAGATATGAT+AGG | + | chr7_2:71547990-71548009 | Msa1073900:intron | 35.0% | |
| CGGACGTATACTTGAAAAAA+TGG | + | chr7_2:71548048-71548067 | Msa1073900:intron | 35.0% | |
| ! | AAAAGAGGCTTAGGTGTTTT+GGG | + | chr7_2:71548074-71548093 | Msa1073900:intron | 35.0% |
| ! | TTGGTTGCTGTTATTGTTGT+TGG | + | chr7_2:71548308-71548327 | Msa1073900:intron | 35.0% |
| !! | TGCCTTTTTAAAAGGTCTTG+AGG | + | chr7_2:71548419-71548438 | Msa1073900:intron | 35.0% |
| GGTGTGTTTCAAGATATGAA+TGG | + | chr7_2:71548553-71548572 | Msa1073900:CDS | 35.0% | |
| ATGAATGGATGCATTTCAAC+TGG | + | chr7_2:71548568-71548587 | Msa1073900:CDS | 35.0% | |
| !! | TGGCTTAAGGTTTTATGATG+GGG | + | chr7_2:71548683-71548702 | Msa1073900:intron | 35.0% |
| !! | TTTGGATTACGGTTTTATGG+TGG | + | chr7_2:71548876-71548895 | Msa1073900:intron | 35.0% |
| !! | TTGGATTACGGTTTTATGGT+GGG | + | chr7_2:71548877-71548896 | Msa1073900:intron | 35.0% |
| !!! | TTCTTCACCATTGGTTTTGA+TGG | - | chr7_2:71548981-71549000 | None:intergenic | 35.0% |
| !! | AATTTCAGGTTCTTCACCAT+TGG | - | chr7_2:71548990-71549009 | None:intergenic | 35.0% |
| GATAGAGATAGATATGTGCA+AGG | + | chr7_2:71549200-71549219 | Msa1073900:CDS | 35.0% | |
| !! | GAGATTACCGGTTTAGAAAT+GGG | + | chr7_2:71549222-71549241 | Msa1073900:CDS | 35.0% |
| CCCGAAAAATGGTTAAAACA+TGG | + | chr7_2:71549261-71549280 | Msa1073900:CDS | 35.0% | |
| AGGAATTCAGGAATCTTAAG+AGG | + | chr7_2:71549291-71549310 | Msa1073900:CDS | 35.0% | |
| !!! | ACTTTTTTTTGCCTAAGTGC+AGG | + | chr7_2:71549629-71549648 | Msa1073900:intron | 35.0% |
| ATATGTAACCTCAGAAGGAT+TGG | - | chr7_2:71549685-71549704 | None:intergenic | 35.0% | |
| CTTCTGTCTAAACTGAAGTA+GGG | - | chr7_2:71549933-71549952 | None:intergenic | 35.0% | |
| TCTTCTGTCTAAACTGAAGT+AGG | - | chr7_2:71549934-71549953 | None:intergenic | 35.0% | |
| TAGACAGAAGAAATGCAAGT+AGG | + | chr7_2:71549943-71549962 | Msa1073900:intron | 35.0% | |
| !!! | TTGGTTATTTTGGTTCATGC+AGG | + | chr7_2:71549983-71550002 | Msa1073900:intron | 35.0% |
| !!! | TATTTTGGTTCATGCAGGAA+AGG | + | chr7_2:71549988-71550007 | Msa1073900:intron | 35.0% |
| TGATTGACAACACTGCTAAA+AGG | + | chr7_2:71550417-71550436 | Msa1073900:intron | 35.0% | |
| AGAAGTCTACACTATCTTCT+AGG | + | chr7_2:71550464-71550483 | Msa1073900:intron | 35.0% | |
| GAAGTCTACACTATCTTCTA+GGG | + | chr7_2:71550465-71550484 | Msa1073900:intron | 35.0% | |
| !! | ATCTTCTAGGGTATCATTCA+AGG | + | chr7_2:71550477-71550496 | Msa1073900:intron | 35.0% |
| TATCATTCAAGGATTCTCCA+TGG | + | chr7_2:71550488-71550507 | Msa1073900:intron | 35.0% | |
| TTATGAGGTGAATACTCCTT+TGG | + | chr7_2:71550686-71550705 | Msa1073900:intron | 35.0% | |
| !! | TCCTCTTTTTCATGTGTTGT+AGG | + | chr7_2:71550911-71550930 | Msa1073900:intron | 35.0% |
| !! | CCTCTTTTTCATGTGTTGTA+GGG | + | chr7_2:71550912-71550931 | Msa1073900:intron | 35.0% |
| !! | CAACAAAAAATTTTGGCCAG+AGG | + | chr7_2:71551169-71551188 | Msa1073900:CDS | 35.0% |
| AAACAAAAAGCAACCTGGTA+AGG | - | chr7_2:71551249-71551268 | None:intergenic | 35.0% | |
| CATTCAAACAAAAAGCAACC+TGG | - | chr7_2:71551254-71551273 | None:intergenic | 35.0% | |
| TTGTGGTGAAGATCTAAACA+TGG | + | chr7_2:71551350-71551369 | Msa1073900:intron | 35.0% | |
| ! | CAGAAAGGTATAGCAAACTA+TGG | + | chr7_2:71551431-71551450 | Msa1073900:intron | 35.0% |
| ! | TCTAGTTCCTATATCTTGAG+GGG | - | chr7_2:71551465-71551484 | None:intergenic | 35.0% |
| !! | GTTCTAGTTCCTATATCTTG+AGG | - | chr7_2:71551467-71551486 | None:intergenic | 35.0% |
| ATAGGAACTAGAACACTTGA+TGG | + | chr7_2:71551473-71551492 | Msa1073900:intron | 35.0% | |
| AATTGTTGTGTTTCCCTGTA+TGG | - | chr7_2:71551502-71551521 | None:intergenic | 35.0% | |
| ATTGAGATTCTACCTAGGAT+TGG | + | chr7_2:71551566-71551585 | Msa1073900:intron | 35.0% | |
| TTGAGATTCTACCTAGGATT+GGG | + | chr7_2:71551567-71551586 | Msa1073900:intron | 35.0% | |
| GATCATAAGATCCTACCATA+GGG | + | chr7_2:71551628-71551647 | Msa1073900:intron | 35.0% | |
| ! | ATACGTGTAACTTTTCCCTA+TGG | - | chr7_2:71551646-71551665 | None:intergenic | 35.0% |
| TTCAAAAACTGGGTCATTTC+AGG | + | chr7_2:71551875-71551894 | Msa1073900:intron | 35.0% | |
| !!! | ATTGTTTTGATATCAGCGTC+GGG | - | chr7_2:71551905-71551924 | None:intergenic | 35.0% |
| !!! | GATTGTTTTGATATCAGCGT+CGG | - | chr7_2:71551906-71551925 | None:intergenic | 35.0% |
| ACTTTGTACTGTGTTACACA+CGG | - | chr7_2:71552002-71552021 | None:intergenic | 35.0% | |
| TGTGTAACACAGTACAAAGT+GGG | + | chr7_2:71552002-71552021 | Msa1073900:intron | 35.0% | |
| ! | TTAACATCGACTAGTGTCTT+TGG | - | chr7_2:71552354-71552373 | None:intergenic | 35.0% |
| AGTCGATGTTAAGAATGTTG+AGG | + | chr7_2:71552362-71552381 | Msa1073900:CDS | 35.0% | |
| ! | GCTTTAGCTGATCATTTTGT+AGG | - | chr7_2:71552485-71552504 | None:intergenic | 35.0% |
| GGTAAATCTAACCTCTTAGA+AGG | + | chr7_2:71552546-71552565 | Msa1073900:CDS | 35.0% | |
| CTAGCAACTTTCTTATCAAG+CGG | - | chr7_2:71552660-71552679 | None:intergenic | 35.0% | |
| AAGTTGCTAGAAAAGAAGCT+AGG | + | chr7_2:71552670-71552689 | Msa1073900:CDS | 35.0% | |
| ! | TTTCTTTTCTTCACAGCCTT+GGG | - | chr7_2:71552753-71552772 | None:intergenic | 35.0% |
| ! | TAGTGTCTATCTGGTCTTTA+TGG | - | chr7_2:71552793-71552812 | None:intergenic | 35.0% |
| TATGAAGCGGCAAACAACAA+TGG | - | chr7_2:71546811-71546830 | None:intergenic | 40.0% | |
| TCCATTGTTGTGCTATGAAG+CGG | - | chr7_2:71546824-71546843 | None:intergenic | 40.0% | |
| GGTTCAGTAGTTTGATGAAG+GGG | - | chr7_2:71546866-71546885 | None:intergenic | 40.0% | |
| GGGTTCAGTAGTTTGATGAA+GGG | - | chr7_2:71546867-71546886 | None:intergenic | 40.0% | |
| TGGGTTCAGTAGTTTGATGA+AGG | - | chr7_2:71546868-71546887 | None:intergenic | 40.0% | |
| ACGGTACTTCTCTTAGTTCA+TGG | + | chr7_2:71547029-71547048 | Msa1073900:CDS | 40.0% | |
| TTACCTGTTCAACAGTAGCA+CGG | - | chr7_2:71547270-71547289 | None:intergenic | 40.0% | |
| ! | CTGGTTTGTAAGGGTTTGTT+TGG | + | chr7_2:71547400-71547419 | Msa1073900:intron | 40.0% |
| ! | TGAGCTATTTAGGGTCAGTT+TGG | - | chr7_2:71547589-71547608 | None:intergenic | 40.0% |
| ! | TATTTAGGGCCAGTTTGGAT+TGG | - | chr7_2:71547620-71547639 | None:intergenic | 40.0% |
| ! | ATTAGAGAGAGATTTGGGGT+CGG | + | chr7_2:71548028-71548047 | Msa1073900:intron | 40.0% |
| ! | AAATGGTGGAAAAGAGGCTT+AGG | + | chr7_2:71548065-71548084 | Msa1073900:intron | 40.0% |
| ! | GAAAAGAGGCTTAGGTGTTT+TGG | + | chr7_2:71548073-71548092 | Msa1073900:intron | 40.0% |
| AAGGAGAGTAGATCTGATGA+AGG | + | chr7_2:71548129-71548148 | Msa1073900:intron | 40.0% | |
| AGGAGAGTAGATCTGATGAA+GGG | + | chr7_2:71548130-71548149 | Msa1073900:intron | 40.0% | |
| ATTGAGCTGATCCCATTAGT+GGG | + | chr7_2:71548278-71548297 | Msa1073900:intron | 40.0% | |
| ! | CCAAGTCTTATCCCACTAAT+GGG | - | chr7_2:71548292-71548311 | None:intergenic | 40.0% |
| ! | ACCAAGTCTTATCCCACTAA+TGG | - | chr7_2:71548293-71548312 | None:intergenic | 40.0% |
| ! | TTTATTTCTTAGTGGAGCCC+TGG | + | chr7_2:71548388-71548407 | Msa1073900:intron | 40.0% |
| AAAAAGGCAAGCCATAACCA+GGG | - | chr7_2:71548408-71548427 | None:intergenic | 40.0% | |
| TAAAAAGGCAAGCCATAACC+AGG | - | chr7_2:71548409-71548428 | None:intergenic | 40.0% | |
| ACTAACAATACAACGCTCCT+AGG | + | chr7_2:71548483-71548502 | Msa1073900:intron | 40.0% | |
| AATAAAACCATGCGCGTTCT+GGG | - | chr7_2:71548517-71548536 | None:intergenic | 40.0% | |
| TGGATGCATTTCAACTGGAA+AGG | + | chr7_2:71548573-71548592 | Msa1073900:CDS | 40.0% | |
| !! | TGGATTACGGTTTTATGGTG+GGG | + | chr7_2:71548878-71548897 | Msa1073900:intron | 40.0% |
| TCTCATGCCATCAAAACCAA+TGG | + | chr7_2:71548971-71548990 | Msa1073900:CDS | 40.0% | |
| GATATGTGCAAGGAGATTAC+CGG | + | chr7_2:71549210-71549229 | Msa1073900:CDS | 40.0% | |
| !! | GGAGATTACCGGTTTAGAAA+TGG | + | chr7_2:71549221-71549240 | Msa1073900:CDS | 40.0% |
| TGCAGTACCCATTTCTAAAC+CGG | - | chr7_2:71549232-71549251 | None:intergenic | 40.0% | |
| GGTTAAAACATGGGCAGAAA+AGG | + | chr7_2:71549271-71549290 | Msa1073900:CDS | 40.0% | |
| GAGGTTACATATCCTGGTTA+TGG | + | chr7_2:71549693-71549712 | Msa1073900:CDS | 40.0% | |
| !! | AAATCTGCATCTTTGAGACG+TGG | - | chr7_2:71550028-71550047 | None:intergenic | 40.0% |
| ATCTTTAGACAAGTTACGGG+AGG | + | chr7_2:71550048-71550067 | Msa1073900:CDS | 40.0% | |
| TCTTTAGACAAGTTACGGGA+GGG | + | chr7_2:71550049-71550068 | Msa1073900:CDS | 40.0% | |
| AGTTCGTTAGCAGGTTTCTT+TGG | + | chr7_2:71550140-71550159 | Msa1073900:intron | 40.0% | |
| AAGCTTCTGAGTTCCAAAAC+AGG | - | chr7_2:71550199-71550218 | None:intergenic | 40.0% | |
| AATAGTGTATCGCGGAACAA+TGG | - | chr7_2:71550307-71550326 | None:intergenic | 40.0% | |
| !! | ATGTGTGAGAAGTGTTTCCA+TGG | - | chr7_2:71550508-71550527 | None:intergenic | 40.0% |
| ! | GAAAATCAAGAGCATGAGGA+TGG | - | chr7_2:71550823-71550842 | None:intergenic | 40.0% |
| ATGTATCCGTAAGTACTCGT+AGG | + | chr7_2:71550861-71550880 | Msa1073900:intron | 40.0% | |
| CCCTACAACACATGAAAAAG+AGG | - | chr7_2:71550915-71550934 | None:intergenic | 40.0% | |
| CATGTGTTGTAGGGCTAATA+AGG | + | chr7_2:71550921-71550940 | Msa1073900:intron | 40.0% | |
| ! | ACACTTGATGGTTTCCATAC+AGG | + | chr7_2:71551485-71551504 | Msa1073900:intron | 40.0% |
| ! | CACTTGATGGTTTCCATACA+GGG | + | chr7_2:71551486-71551505 | Msa1073900:intron | 40.0% |
| ATTCTACCTAGGATTGGGAA+GGG | + | chr7_2:71551572-71551591 | Msa1073900:intron | 40.0% | |
| GGATCATAAGATCCTACCAT+AGG | + | chr7_2:71551627-71551646 | Msa1073900:intron | 40.0% | |
| ! | GTGTAACTTTTCCCTATGGT+AGG | - | chr7_2:71551642-71551661 | None:intergenic | 40.0% |
| CAAGGACTGATGGAAGAATA+AGG | + | chr7_2:71551765-71551784 | Msa1073900:intron | 40.0% | |
| ACTGATGGAAGAATAAGGAC+TGG | + | chr7_2:71551770-71551789 | Msa1073900:intron | 40.0% | |
| ATGGAAGAATAAGGACTGGA+GGG | + | chr7_2:71551774-71551793 | Msa1073900:intron | 40.0% | |
| TTACACACGGAGTTCATTGT+GGG | - | chr7_2:71551989-71552008 | None:intergenic | 40.0% | |
| GTGTGTAACACAGTACAAAG+TGG | + | chr7_2:71552001-71552020 | Msa1073900:intron | 40.0% | |
| GTGTAACACAGTACAAAGTG+GGG | + | chr7_2:71552003-71552022 | Msa1073900:intron | 40.0% | |
| TGTAACACAGTACAAAGTGG+GGG | + | chr7_2:71552004-71552023 | Msa1073900:intron | 40.0% | |
| CGATGTTAAGAATGTTGAGG+AGG | + | chr7_2:71552365-71552384 | Msa1073900:CDS | 40.0% | |
| GATGTACAACGTATAACGAG+CGG | + | chr7_2:71552387-71552406 | Msa1073900:CDS | 40.0% | |
| ! | AGCTGATCATTTTGTAGGGA+AGG | - | chr7_2:71552480-71552499 | None:intergenic | 40.0% |
| TTTACCATCGGAGATGGTAT+GGG | - | chr7_2:71552532-71552551 | None:intergenic | 40.0% | |
| ATTTACCATCGGAGATGGTA+TGG | - | chr7_2:71552533-71552552 | None:intergenic | 40.0% | |
| GTTAGATTTACCATCGGAGA+TGG | - | chr7_2:71552538-71552557 | None:intergenic | 40.0% | |
| ! | TTCTTTTCTTCACAGCCTTG+GGG | - | chr7_2:71552752-71552771 | None:intergenic | 40.0% |
| ! | CTTTCTTTTCTTCACAGCCT+TGG | - | chr7_2:71552754-71552773 | None:intergenic | 40.0% |
| TGTTATGGCCATCTGTTTGT+AGG | + | chr7_2:71552819-71552838 | Msa1073900:three_prime_UTR | 40.0% | |
| CTTCCTCTGTTTGATCAAAG+TGG | + | chr7_2:71553023-71553042 | Msa1073900:three_prime_UTR | 40.0% | |
| !! | GTCTAATGCGTCGTCGATTT+CGG | - | chr7_2:71546969-71546988 | None:intergenic | 45.0% |
| AAATCGACGACGCATTAGAC+TGG | + | chr7_2:71546969-71546988 | Msa1073900:CDS | 45.0% | |
| ! | TTCTGGTTACGATTGGAGAG+AGG | - | chr7_2:71547103-71547122 | None:intergenic | 45.0% |
| TATTCGCGCTTCTCCATTAG+AGG | + | chr7_2:71547135-71547154 | Msa1073900:CDS | 45.0% | |
| CGCTTCTCCATTAGAGGAAT+GGG | + | chr7_2:71547141-71547160 | Msa1073900:CDS | 45.0% | |
| TCTCCATTAGAGGAATGGGA+AGG | + | chr7_2:71547145-71547164 | Msa1073900:CDS | 45.0% | |
| CTTCCTTCCCATTCCTCTAA+TGG | - | chr7_2:71547151-71547170 | None:intergenic | 45.0% | |
| AGTGTTCGAGAGATGGCTAT+TGG | + | chr7_2:71547217-71547236 | Msa1073900:CDS | 45.0% | |
| ! | GGTAAAATTAGTGGATGGGC+TGG | + | chr7_2:71547381-71547400 | Msa1073900:intron | 45.0% |
| AAAGGCTACCATAAGCGTAG+TGG | + | chr7_2:71547943-71547962 | Msa1073900:intron | 45.0% | |
| TGGAGATGAGGATGTTGTGT+TGG | + | chr7_2:71547963-71547982 | Msa1073900:intron | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | + | chr7_2:71547971-71547990 | Msa1073900:intron | 45.0% | |
| GTTGTGTTGGATGTGTGGTA+AGG | + | chr7_2:71547976-71547995 | Msa1073900:intron | 45.0% | |
| !! | TGTTTTGGGCATGTAGAGAG+AGG | + | chr7_2:71548088-71548107 | Msa1073900:intron | 45.0% |
| AGTCAGATCACTAGAGACTG+AGG | + | chr7_2:71548154-71548173 | Msa1073900:intron | 45.0% | |
| CACTAATGGGATCAGCTCAA+TGG | - | chr7_2:71548279-71548298 | None:intergenic | 45.0% | |
| CATTGAGCTGATCCCATTAG+TGG | + | chr7_2:71548277-71548296 | Msa1073900:intron | 45.0% | |
| CCCATTAGTGGGATAAGACT+TGG | + | chr7_2:71548289-71548308 | Msa1073900:intron | 45.0% | |
| GAATAAAACCATGCGCGTTC+TGG | - | chr7_2:71548518-71548537 | None:intergenic | 45.0% | |
| ! | GGTTTAGAAATGGGTACTGC+AGG | + | chr7_2:71549231-71549250 | Msa1073900:CDS | 45.0% |
| CAGGCATAATCCCCGAAAAA+TGG | + | chr7_2:71549250-71549269 | Msa1073900:CDS | 45.0% | |
| CATGGGCAGAAAAGGAATTC+AGG | + | chr7_2:71549279-71549298 | Msa1073900:CDS | 45.0% | |
| CGCTCAGGGATGATACATAA+AGG | - | chr7_2:71549560-71549579 | None:intergenic | 45.0% | |
| GAACAAACTAAGTGCGCTCA+GGG | - | chr7_2:71549574-71549593 | None:intergenic | 45.0% | |
| AGAACAAACTAAGTGCGCTC+AGG | - | chr7_2:71549575-71549594 | None:intergenic | 45.0% | |
| TTTGCCTAAGTGCAGGCTAA+AGG | + | chr7_2:71549636-71549655 | Msa1073900:intron | 45.0% | |
| TCTTCCTTTAGCCTGCACTT+AGG | - | chr7_2:71549643-71549662 | None:intergenic | 45.0% | |
| AAGTGCAGGCTAAAGGAAGA+AGG | + | chr7_2:71549643-71549662 | Msa1073900:intron | 45.0% | |
| GGCTAAAGGAAGAAGGAATC+AGG | + | chr7_2:71549650-71549669 | Msa1073900:intron | 45.0% | |
| ACCTCAGAAGGATTGGAGTA+GGG | - | chr7_2:71549678-71549697 | None:intergenic | 45.0% | |
| AACCTCAGAAGGATTGGAGT+AGG | - | chr7_2:71549679-71549698 | None:intergenic | 45.0% | |
| CCAGGATATGTAACCTCAGA+AGG | - | chr7_2:71549690-71549709 | None:intergenic | 45.0% | |
| !! | CCTTCTGAGGTTACATATCC+TGG | + | chr7_2:71549687-71549706 | Msa1073900:CDS | 45.0% |
| TTGGTTCATGCAGGAAAGGA+TGG | + | chr7_2:71549992-71550011 | Msa1073900:intron | 45.0% | |
| GCTGTAACACCGTATCATAG+AGG | + | chr7_2:71550363-71550382 | Msa1073900:intron | 45.0% | |
| GCAGTGTTGTCAATCACAGA+CGG | - | chr7_2:71550413-71550432 | None:intergenic | 45.0% | |
| ! | CAGAAGTGCAAATTGGTGCA+TGG | + | chr7_2:71550636-71550655 | Msa1073900:CDS | 45.0% |
| ! | CGCAGAAAATCAAGAGCATG+AGG | - | chr7_2:71550827-71550846 | None:intergenic | 45.0% |
| CTAGTGCCTACGAGTACTTA+CGG | - | chr7_2:71550870-71550889 | None:intergenic | 45.0% | |
| AGAGGATGAGATTGCAGACT+CGG | + | chr7_2:71551204-71551223 | Msa1073900:CDS | 45.0% | |
| GATCGATCCCCTCAAGATAT+AGG | + | chr7_2:71551455-71551474 | Msa1073900:intron | 45.0% | |
| GATTCTACCTAGGATTGGGA+AGG | + | chr7_2:71551571-71551590 | Msa1073900:intron | 45.0% | |
| TTCTACCTAGGATTGGGAAG+GGG | + | chr7_2:71551573-71551592 | Msa1073900:intron | 45.0% | |
| GGTTGAGAGATTGTAACTCG+AGG | + | chr7_2:71551594-71551613 | Msa1073900:intron | 45.0% | |
| GTAACTCGAGGATCGTATCA+TGG | + | chr7_2:71551606-71551625 | Msa1073900:intron | 45.0% | |
| GATGGAAGAATAAGGACTGG+AGG | + | chr7_2:71551773-71551792 | Msa1073900:intron | 45.0% | |
| ATAAGGACTGGAGGGAACAA+AGG | + | chr7_2:71551782-71551801 | Msa1073900:intron | 45.0% | |
| GTTACACACGGAGTTCATTG+TGG | - | chr7_2:71551990-71552009 | None:intergenic | 45.0% | |
| ATAACGAGCGGCAAAGAAAC+TGG | + | chr7_2:71552399-71552418 | Msa1073900:CDS | 45.0% | |
| TTGTCTTCTTCGTTCTCACC+AGG | - | chr7_2:71552588-71552607 | None:intergenic | 45.0% | |
| AAGAGGAGAAAAGAGAAGCC+AGG | + | chr7_2:71552715-71552734 | Msa1073900:CDS | 45.0% | |
| !!! | CTTGGGGAGTTTAGTTTTCC+TGG | - | chr7_2:71552736-71552755 | None:intergenic | 45.0% |
| CAGGAAAACTAAACTCCCCA+AGG | + | chr7_2:71552734-71552753 | Msa1073900:CDS | 45.0% | |
| !!! | AATTTTTTTTTTCAATTAAT+TGG | + | chr7_2:71547677-71547696 | Msa1073900:intron | 5.0% |
| !!! | TATTTTTTTTTTATAATCTT+TGG | + | chr7_2:71548663-71548682 | Msa1073900:intron | 5.0% |
| !!! | AATCAAATTTTTTTTTATAT+GGG | - | chr7_2:71549609-71549628 | None:intergenic | 5.0% |
| !!! | TAATCAAATTTTTTTTTATA+TGG | - | chr7_2:71549610-71549629 | None:intergenic | 5.0% |
| GCCGCTTCATAGCACAACAA+TGG | + | chr7_2:71546820-71546839 | Msa1073900:exon | 50.0% | |
| ! | GCAGCGTTGAAGAATGAGAG+TGG | - | chr7_2:71547078-71547097 | None:intergenic | 50.0% |
| GCGCTTCTCCATTAGAGGAA+TGG | + | chr7_2:71547140-71547159 | Msa1073900:CDS | 50.0% | |
| ACTGTTACTACCGCGATTCG+TGG | + | chr7_2:71547193-71547212 | Msa1073900:CDS | 50.0% | |
| TCGAACACTTCCACGAATCG+CGG | - | chr7_2:71547206-71547225 | None:intergenic | 50.0% | |
| !! | TCGTGGAAGTGTTCGAGAGA+TGG | + | chr7_2:71547210-71547229 | Msa1073900:CDS | 50.0% |
| ! | TGACCGTGCTACTGTTGAAC+AGG | + | chr7_2:71547264-71547283 | Msa1073900:CDS | 50.0% |
| !! | AGTGGATGGGCTGGTTTGTA+AGG | + | chr7_2:71547390-71547409 | Msa1073900:intron | 50.0% |
| !! | GTGGATGGGCTGGTTTGTAA+GGG | + | chr7_2:71547391-71547410 | Msa1073900:intron | 50.0% |
| CCTCATCTCCACTACGCTTA+TGG | - | chr7_2:71547954-71547973 | None:intergenic | 50.0% | |
| ! | CCATAAGCGTAGTGGAGATG+AGG | + | chr7_2:71547951-71547970 | Msa1073900:intron | 50.0% |
| TCTTAGTGGAGCCCTGGTTA+TGG | + | chr7_2:71548394-71548413 | Msa1073900:intron | 50.0% | |
| !! | CGTTCTGGGATCAATTGCCT+AGG | - | chr7_2:71548503-71548522 | None:intergenic | 50.0% |
| AATTGATCCCAGAACGCGCA+TGG | + | chr7_2:71548507-71548526 | Msa1073900:CDS | 50.0% | |
| TTCATGCAGGAAAGGATGGC+TGG | + | chr7_2:71549996-71550015 | Msa1073900:intron | 50.0% | |
| TCATGCAGGAAAGGATGGCT+GGG | + | chr7_2:71549997-71550016 | Msa1073900:intron | 50.0% | |
| !! | TGCATCTTTGAGACGTGGAG+CGG | - | chr7_2:71550023-71550042 | None:intergenic | 50.0% |
| ! | CAAGAGCATGAGGATGGTCA+GGG | - | chr7_2:71550817-71550836 | None:intergenic | 50.0% |
| ! | TCAAGAGCATGAGGATGGTC+AGG | - | chr7_2:71550818-71550837 | None:intergenic | 50.0% |
| CTCTGCAGATACATCTCCTC+TGG | - | chr7_2:71551188-71551207 | None:intergenic | 50.0% | |
| CAGAGGAGATGTATCTGCAG+AGG | + | chr7_2:71551186-71551205 | Msa1073900:CDS | 50.0% | |
| ! | TGCAGACTCGGTATTTGCAC+AGG | + | chr7_2:71551216-71551235 | Msa1073900:CDS | 50.0% |
| ! | CACAGGTAACTTGCCTTACC+AGG | + | chr7_2:71551233-71551252 | Msa1073900:intron | 50.0% |
| GAGGGCGGAAAGACACAAAT+GGG | - | chr7_2:71551928-71551947 | None:intergenic | 50.0% | |
| AGAGGGCGGAAAGACACAAA+TGG | - | chr7_2:71551929-71551948 | None:intergenic | 50.0% | |
| AACACAGTACAAAGTGGGGG+TGG | + | chr7_2:71552007-71552026 | Msa1073900:intron | 50.0% | |
| GATTCCCATACCATCTCCGA+TGG | + | chr7_2:71552525-71552544 | Msa1073900:CDS | 50.0% | |
| TGGTGACCACCGTGAGCATT+GGG | - | chr7_2:71547058-71547077 | None:intergenic | 55.0% | |
| GCCCTACTCCAATCCTTCTG+AGG | + | chr7_2:71549674-71549693 | Msa1073900:CDS | 55.0% | |
| GTTACGGGAGGGCTATGTTG+AGG | + | chr7_2:71550060-71550079 | Msa1073900:CDS | 55.0% | |
| GTGGCTGCGCTATCTTACAG+CGG | + | chr7_2:71550266-71550285 | Msa1073900:intron | 55.0% | |
| CTCAACCCCTTCCCAATCCT+AGG | - | chr7_2:71551581-71551600 | None:intergenic | 55.0% | |
| ACCATAGAAGGAGGAGTCGC+AGG | + | chr7_2:71551734-71551753 | Msa1073900:intron | 55.0% | |
| ACCTGCGACTCCTCCTTCTA+TGG | - | chr7_2:71551738-71551757 | None:intergenic | 55.0% | |
| ATAGAAGGAGGAGTCGCAGG+TGG | + | chr7_2:71551737-71551756 | Msa1073900:intron | 55.0% | |
| CGAGAGAGAACTGAGATCGC+TGG | + | chr7_2:71551810-71551829 | Msa1073900:intron | 55.0% | |
| ! | AACTGAGATCGCTGGTGCTG+TGG | + | chr7_2:71551818-71551837 | Msa1073900:intron | 55.0% |
| TTCCGCCCTCTTCAATCCCA+CGG | + | chr7_2:71551938-71551957 | Msa1073900:intron | 55.0% | |
| ACAGTACAAAGTGGGGGTGG+TGG | + | chr7_2:71552010-71552029 | Msa1073900:intron | 55.0% | |
| CAGTACAAAGTGGGGGTGGT+GGG | + | chr7_2:71552011-71552030 | Msa1073900:intron | 55.0% | |
| AGTACAAAGTGGGGGTGGTG+GGG | + | chr7_2:71552012-71552031 | Msa1073900:intron | 55.0% | |
| CCTCGGCATCACCTTCTAAG+AGG | - | chr7_2:71552560-71552579 | None:intergenic | 55.0% | |
| CCTCTTAGAAGGTGATGCCG+AGG | + | chr7_2:71552557-71552576 | Msa1073900:CDS | 55.0% | |
| ! | GTTCTCACCAGGTTGAGCCT+CGG | - | chr7_2:71552577-71552596 | None:intergenic | 55.0% |
| TCATGGCGCCCCAATGCTCA+CGG | + | chr7_2:71547046-71547065 | Msa1073900:CDS | 60.0% | |
| ! | GGTGACCACCGTGAGCATTG+GGG | - | chr7_2:71547057-71547076 | None:intergenic | 60.0% |
| GTGGTGACCACCGTGAGCAT+TGG | - | chr7_2:71547059-71547078 | None:intergenic | 60.0% | |
| TCCGCCCTCTTCAATCCCAC+GGG | + | chr7_2:71551939-71551958 | Msa1073900:intron | 60.0% | |
| CGTGCCCGTGGGATTGAAGA+GGG | - | chr7_2:71551946-71551965 | None:intergenic | 60.0% | |
| TTCAATCCCACGGGCACGCT+GGG | + | chr7_2:71551948-71551967 | Msa1073900:intron | 60.0% | |
| AATCTTCCCAGCGTGCCCGT+GGG | - | chr7_2:71551957-71551976 | None:intergenic | 60.0% | |
| ! | GTACAAAGTGGGGGTGGTGG+GGG | + | chr7_2:71552013-71552032 | Msa1073900:intron | 60.0% |
| !! | TACAAAGTGGGGGTGGTGGG+GGG | + | chr7_2:71552014-71552033 | Msa1073900:intron | 60.0% |
| GAAGGAGGAGTCGCAGGTGG+CGG | + | chr7_2:71551740-71551759 | Msa1073900:intron | 65.0% | |
| ! | GGTGGCGGCTCAAGGACTGA+TGG | + | chr7_2:71551755-71551774 | Msa1073900:intron | 65.0% |
| GCCCGTGGGATTGAAGAGGG+CGG | - | chr7_2:71551943-71551962 | None:intergenic | 65.0% | |
| GCGTGCCCGTGGGATTGAAG+AGG | - | chr7_2:71551947-71551966 | None:intergenic | 65.0% | |
| CTTCAATCCCACGGGCACGC+TGG | + | chr7_2:71551947-71551966 | Msa1073900:intron | 65.0% | |
| CAATCTTCCCAGCGTGCCCG+TGG | - | chr7_2:71551958-71551977 | None:intergenic | 65.0% | |
| GGTGATGCCGAGGCTCAACC+TGG | + | chr7_2:71552567-71552586 | Msa1073900:CDS | 65.0% | |
| TGGCGCCCCAATGCTCACGG+TGG | + | chr7_2:71547049-71547068 | Msa1073900:CDS | 70.0% | |
| ! | GAGTCGCAGGTGGCGGCTCA+AGG | + | chr7_2:71551747-71551766 | Msa1073900:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 71546794 | 71553047 | 71546794 | ID=Msa1073900;Name=Msa1073900 |
| chr7_2 | mRNA | 71546794 | 71553047 | 71546794 | ID=Msa1073900-mRNA-1;Parent=Msa1073900;Name=Msa1073900-mRNA-1;_AED=0.09;_eAED=0.09;_QI=45|1|1|1|1|1|12|241|589 |
| chr7_2 | exon | 71546794 | 71547285 | 71546794 | ID=Msa1073900-mRNA-1:exon:16215;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71548505 | 71548597 | 71548505 | ID=Msa1073900-mRNA-1:exon:16216;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71548764 | 71548811 | 71548764 | ID=Msa1073900-mRNA-1:exon:16217;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71548962 | 71549056 | 71548962 | ID=Msa1073900-mRNA-1:exon:16218;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71549199 | 71549312 | 71549199 | ID=Msa1073900-mRNA-1:exon:16219;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71549651 | 71549724 | 71549651 | ID=Msa1073900-mRNA-1:exon:16220;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71550005 | 71550081 | 71550005 | ID=Msa1073900-mRNA-1:exon:16221;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71550609 | 71550692 | 71550609 | ID=Msa1073900-mRNA-1:exon:16222;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71550776 | 71550868 | 71550776 | ID=Msa1073900-mRNA-1:exon:16223;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71550979 | 71551086 | 71550979 | ID=Msa1073900-mRNA-1:exon:16224;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71551166 | 71551237 | 71551166 | ID=Msa1073900-mRNA-1:exon:16225;Parent=Msa1073900-mRNA-1 |
| chr7_2 | exon | 71552342 | 71553047 | 71552342 | ID=Msa1073900-mRNA-1:exon:16226;Parent=Msa1073900-mRNA-1 |
| chr7_2 | five_prime_UTR | 71546794 | 71546838 | 71546794 | ID=Msa1073900-mRNA-1:five_prime_utr;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71546839 | 71547285 | 71546839 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71548505 | 71548597 | 71548505 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71548764 | 71548811 | 71548764 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71548962 | 71549056 | 71548962 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71549199 | 71549312 | 71549199 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71549651 | 71549724 | 71549651 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71550005 | 71550081 | 71550005 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71550609 | 71550692 | 71550609 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71550776 | 71550868 | 71550776 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71550979 | 71551086 | 71550979 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71551166 | 71551237 | 71551166 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | CDS | 71552342 | 71552806 | 71552342 | ID=Msa1073900-mRNA-1:cds;Parent=Msa1073900-mRNA-1 |
| chr7_2 | three_prime_UTR | 71552807 | 71553047 | 71552807 | ID=Msa1073900-mRNA-1:three_prime_utr;Parent=Msa1073900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
