AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0387730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387730 MtrunA17_Chr3g0120801 92.500 200 2 1 1 187 1 200 2.35e-132 369
Msa0387730 MtrunA17_Chr8g0359571 35.043 117 63 1 26 129 104 220 2.75e-16 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387730 AT3G01790.1 75.281 178 31 1 8 172 14 191 9.58e-96 276
Msa0387730 AT3G01790.2 75.281 178 31 1 8 172 14 191 9.58e-96 276
Msa0387730 AT3G01790.3 73.333 120 19 1 8 114 14 133 1.69e-58 181
Msa0387730 AT1G78630.1 32.800 125 70 2 26 136 105 229 2.28e-14 69.3

Find 60 sgRNAs with CRISPR-Local

Find 544 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTCAATATGACATTTAT+AGG 0.198923 3_1:+91797785 None:intergenic
TTCGAACCAGACTACCATTT+TGG 0.239078 3_1:-91797650 Msa0387730:three_prime_UTR
CAGGGAAGATCCTTAATTTC+CGG 0.312788 3_1:+91798067 None:intergenic
ATCTTGATGGGCTCCGGTGG+CGG 0.315099 3_1:-91801235 Msa0387730:CDS
ATTAAACGCATTAATCTTGA+TGG 0.336783 3_1:-91801248 Msa0387730:CDS
TCAAATAGCTACTGTAGTTA+TGG 0.345393 3_1:-91800014 Msa0387730:CDS
AATAACATCTGTAGGGTCTT+TGG 0.350210 3_1:+91799601 None:intergenic
AGGACAGGGACCGGAAATTA+AGG 0.354593 3_1:-91798077 Msa0387730:CDS
TGGCATTCTAAAGGTACATT+TGG 0.359024 3_1:-91797630 Msa0387730:three_prime_UTR
TCTTGATGGGCTCCGGTGGC+GGG 0.385945 3_1:-91801234 Msa0387730:CDS
AATGATTCGAGCACAGAAAA+AGG 0.392832 3_1:-91797953 Msa0387730:CDS
CAAATAGCTACTGTAGTTAT+GGG 0.396768 3_1:-91800013 Msa0387730:CDS
GTACCTTTAGAATGCCAAAA+TGG 0.398968 3_1:+91797636 None:intergenic
ATGTTCCTCATGCAGGTTCT+CGG 0.405648 3_1:-91800049 Msa0387730:intron
CCTGGTAGTGAGCACCCCTT+TGG 0.427762 3_1:-91798048 Msa0387730:CDS
ATATCTCCATCGTCACGATT+AGG 0.431994 3_1:+91799968 None:intergenic
AGAATGCCAAAATGGTAGTC+TGG 0.442610 3_1:+91797644 None:intergenic
AATCCTTACCTTGAGGTTGA+AGG 0.443780 3_1:+91801433 None:intergenic
TTGTCATTTGAATGAGAAGT+AGG 0.447814 3_1:-91797833 Msa0387730:three_prime_UTR
TTCTTAACAATGTTCTTACT+AGG 0.456424 3_1:+91797729 None:intergenic
CCAAAGGGGTGCTCACTACC+AGG 0.457830 3_1:+91798048 None:intergenic
AGAAGAAGAAGAAAGGATCT+TGG 0.462326 3_1:-91801661 Msa0387730:five_prime_UTR
CATACTATAAATTAAATTTG+AGG 0.475654 3_1:+91801626 None:intergenic
ACATTCAGTCACCTGGCCCT+TGG 0.487414 3_1:+91801202 None:intergenic
GCCAAGGATATTGCTGTGAC+TGG 0.487743 3_1:-91799929 Msa0387730:CDS
CTCATCTCTCGTACTGTCCT+AGG 0.490690 3_1:+91797994 None:intergenic
GTCCTAGGAGGCATCACATA+AGG 0.492669 3_1:+91798009 None:intergenic
TGTTCCTCATGCAGGTTCTC+GGG 0.496429 3_1:-91800048 Msa0387730:intron
AACCTTATGTGATGCCTCCT+AGG 0.498050 3_1:-91798011 Msa0387730:CDS
GCTTTGCGAATAACATCTGT+AGG 0.508354 3_1:+91799593 None:intergenic
GCATTAATCTTGATGGGCTC+CGG 0.515892 3_1:-91801241 Msa0387730:CDS
GTGAGCACCCCTTTGGTGAT+CGG 0.517843 3_1:-91798041 Msa0387730:CDS
CCCAGTCACAGCAATATCCT+TGG 0.518223 3_1:+91799928 None:intergenic
TTCTAGTGGCCGATCACCAA+AGG 0.519844 3_1:+91798032 None:intergenic
AATGTATGTAGGACAGGGAC+CGG 0.545065 3_1:-91798086 Msa0387730:intron
TCTAGTGGCCGATCACCAAA+GGG 0.547147 3_1:+91798033 None:intergenic
AGCTACTGTAGTTATGGGAA+AGG 0.547157 3_1:-91800008 Msa0387730:CDS
TTAAACGCATTAATCTTGAT+GGG 0.548352 3_1:-91801247 Msa0387730:CDS
ATCATTGCACGCCTTGCTCG+TGG 0.552038 3_1:+91797970 None:intergenic
TGGCATCGAAAACCCGCCAC+CGG 0.554361 3_1:+91801222 None:intergenic
TCACGATTAGGAGTATAAGT+TGG 0.572405 3_1:+91799980 None:intergenic
GGTAAACTCCTTCAACCTCA+AGG 0.594941 3_1:-91801441 Msa0387730:intron
CCTTAAGCAAAGAACTCTGA+AGG 0.596688 3_1:-91799633 Msa0387730:intron
CGGAAATTAAGGATCTTCCC+TGG 0.598071 3_1:-91798066 Msa0387730:CDS
AAGAACTCTGAAGGATCAGA+TGG 0.606577 3_1:-91799624 Msa0387730:CDS
TTAATCTTGATGGGCTCCGG+TGG 0.608778 3_1:-91801238 Msa0387730:CDS
GGCATCACATAAGGTTCTAG+TGG 0.614175 3_1:+91798018 None:intergenic
CTTTGCGAATAACATCTGTA+GGG 0.616003 3_1:+91799594 None:intergenic
TCCTCATGCAGGTTCTCGGG+AGG 0.625821 3_1:-91800045 Msa0387730:intron
TATACTCCTAATCGTGACGA+TGG 0.626802 3_1:-91799974 Msa0387730:CDS
CCAAGGATATTGCTGTGACT+GGG 0.629076 3_1:-91799928 Msa0387730:CDS
GAGAGATGAGACCACGAGCA+AGG 0.633625 3_1:-91797981 Msa0387730:CDS
AAATTAAATTTGAGGTACAA+CGG 0.637186 3_1:+91801634 None:intergenic
GTGCATTGTGCTTAATGCCA+AGG 0.638542 3_1:-91799945 Msa0387730:CDS
AGGATATTGCTGTGACTGGG+AGG 0.647448 3_1:-91799925 Msa0387730:CDS
TGGGAGGAAGCTGACAGACA+AGG 0.650353 3_1:-91799909 Msa0387730:intron
ATCTCTCGTACTGTCCTAGG+AGG 0.665987 3_1:+91797997 None:intergenic
CAAAGGGGTGCTCACTACCA+GGG 0.686267 3_1:+91798049 None:intergenic
TGAGCAGCGACAGAATGCTG+AGG 0.718134 3_1:-91797908 Msa0387730:CDS
CTAGTGGCCGATCACCAAAG+GGG 0.770452 3_1:+91798034 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTAAGTTTATTTTATTTT+AGG - chr3_1:91798813-91798832 Msa0387730:intron 10.0%
!! TAAAATTATAAATACTACTT+TGG + chr3_1:91799479-91799498 None:intergenic 10.0%
!!! AAAGTAGTATTTATAATTTT+AGG - chr3_1:91799478-91799497 Msa0387730:intron 10.0%
!!! AAAATACAAATTTTTAAATC+AGG - chr3_1:91800156-91800175 Msa0387730:intron 10.0%
!!! AAAAGTTTTTTAAGAAATTA+AGG + chr3_1:91800541-91800560 None:intergenic 10.0%
!! ATAACTAATTAAAAAGAATA+AGG + chr3_1:91801145-91801164 None:intergenic 10.0%
!!! CTTTAAGTTTATTTTATTTT+AGG - chr3_1:91798813-91798832 Msa0387730:intron 10.0%
!! TAAAATTATAAATACTACTT+TGG + chr3_1:91799479-91799498 None:intergenic 10.0%
!!! AAAGTAGTATTTATAATTTT+AGG - chr3_1:91799478-91799497 Msa0387730:intron 10.0%
!!! AAAATACAAATTTTTAAATC+AGG - chr3_1:91800156-91800175 Msa0387730:intron 10.0%
!!! AAAAGTTTTTTAAGAAATTA+AGG + chr3_1:91800541-91800560 None:intergenic 10.0%
!! ATAACTAATTAAAAAGAATA+AGG + chr3_1:91801145-91801164 None:intergenic 10.0%
!! CATACTATAAATTAAATTTG+AGG + chr3_1:91797678-91797697 None:intergenic 15.0%
!! TATATCATAAATAATGACAA+GGG + chr3_1:91797903-91797922 None:intergenic 15.0%
!! ACATTAAAATCATAATTTCA+TGG + chr3_1:91798127-91798146 None:intergenic 15.0%
!!! ACATTTTGAAACAATTTATT+GGG - chr3_1:91799073-91799092 Msa0387730:intron 15.0%
!!! TATAATTGTTGTTTTGTATA+TGG - chr3_1:91799570-91799589 Msa0387730:CDS 15.0%
!!! AAAGTATTGAATTAAATTAC+TGG - chr3_1:91799810-91799829 Msa0387730:intron 15.0%
!! ATGAAAAAAAATAATCATTC+TGG + chr3_1:91799839-91799858 None:intergenic 15.0%
!!! TGATTATTTTTTTTCATTGT+TGG - chr3_1:91799842-91799861 Msa0387730:intron 15.0%
!!! TATTCTTTTGAATTGTAATT+TGG + chr3_1:91800243-91800262 None:intergenic 15.0%
!! AAGAATAAAAGAAAATAATG+AGG - chr3_1:91800256-91800275 Msa0387730:intron 15.0%
!!! AAATTTTTCACAATTGTAAA+CGG - chr3_1:91800310-91800329 Msa0387730:intron 15.0%
!! TATATAAAATAAAATTCACC+AGG - chr3_1:91801007-91801026 Msa0387730:intron 15.0%
!! CATACTATAAATTAAATTTG+AGG + chr3_1:91797678-91797697 None:intergenic 15.0%
!! TATATCATAAATAATGACAA+GGG + chr3_1:91797903-91797922 None:intergenic 15.0%
!! ACATTAAAATCATAATTTCA+TGG + chr3_1:91798127-91798146 None:intergenic 15.0%
!!! ACATTTTGAAACAATTTATT+GGG - chr3_1:91799073-91799092 Msa0387730:intron 15.0%
!!! TATAATTGTTGTTTTGTATA+TGG - chr3_1:91799570-91799589 Msa0387730:CDS 15.0%
!!! AAAGTATTGAATTAAATTAC+TGG - chr3_1:91799810-91799829 Msa0387730:intron 15.0%
!! ATGAAAAAAAATAATCATTC+TGG + chr3_1:91799839-91799858 None:intergenic 15.0%
!!! TGATTATTTTTTTTCATTGT+TGG - chr3_1:91799842-91799861 Msa0387730:intron 15.0%
!!! TATTCTTTTGAATTGTAATT+TGG + chr3_1:91800243-91800262 None:intergenic 15.0%
!! AAGAATAAAAGAAAATAATG+AGG - chr3_1:91800256-91800275 Msa0387730:intron 15.0%
!!! AAATTTTTCACAATTGTAAA+CGG - chr3_1:91800310-91800329 Msa0387730:intron 15.0%
!! TATATAAAATAAAATTCACC+AGG - chr3_1:91801007-91801026 Msa0387730:intron 15.0%
!!! AAATTAAATTTGAGGTACAA+CGG + chr3_1:91797670-91797689 None:intergenic 20.0%
!!! TATTTTTTTGAATAGGAAGA+AGG - chr3_1:91797805-91797824 Msa0387730:three_prime_UTR 20.0%
!! ATATCATAAATAATGACAAG+GGG + chr3_1:91797902-91797921 None:intergenic 20.0%
!! CTATATCATAAATAATGACA+AGG + chr3_1:91797904-91797923 None:intergenic 20.0%
!!! TTTTTTTTCTTTGAAGTATG+TGG - chr3_1:91798155-91798174 Msa0387730:intron 20.0%
!! ATGAAAATATTAGAGAGATT+TGG - chr3_1:91798499-91798518 Msa0387730:intron 20.0%
!! TGAAAATATTAGAGAGATTT+GGG - chr3_1:91798500-91798519 Msa0387730:intron 20.0%
!!! GACATTTTGAAACAATTTAT+TGG - chr3_1:91799072-91799091 Msa0387730:intron 20.0%
!! CAAAACAACAATTATAAAAC+TGG + chr3_1:91799566-91799585 None:intergenic 20.0%
!!! TTTTTCTATGGATTCTAAAA+TGG - chr3_1:91800404-91800423 Msa0387730:intron 20.0%
!!! TTGCCCAATTTTTTAAAATT+CGG - chr3_1:91800708-91800727 Msa0387730:intron 20.0%
!!! TTGTTTCTTCTTTTTATCAT+AGG - chr3_1:91800900-91800919 Msa0387730:intron 20.0%
!!! AAATTAAATTTGAGGTACAA+CGG + chr3_1:91797670-91797689 None:intergenic 20.0%
!!! TATTTTTTTGAATAGGAAGA+AGG - chr3_1:91797805-91797824 Msa0387730:three_prime_UTR 20.0%
!! ATATCATAAATAATGACAAG+GGG + chr3_1:91797902-91797921 None:intergenic 20.0%
!! CTATATCATAAATAATGACA+AGG + chr3_1:91797904-91797923 None:intergenic 20.0%
!!! TTTTTTTTCTTTGAAGTATG+TGG - chr3_1:91798155-91798174 Msa0387730:intron 20.0%
!! ATGAAAATATTAGAGAGATT+TGG - chr3_1:91798499-91798518 Msa0387730:intron 20.0%
!! TGAAAATATTAGAGAGATTT+GGG - chr3_1:91798500-91798519 Msa0387730:intron 20.0%
!!! GACATTTTGAAACAATTTAT+TGG - chr3_1:91799072-91799091 Msa0387730:intron 20.0%
!! CAAAACAACAATTATAAAAC+TGG + chr3_1:91799566-91799585 None:intergenic 20.0%
!!! TTTTTCTATGGATTCTAAAA+TGG - chr3_1:91800404-91800423 Msa0387730:intron 20.0%
!!! TTGCCCAATTTTTTAAAATT+CGG - chr3_1:91800708-91800727 Msa0387730:intron 20.0%
!!! TTGTTTCTTCTTTTTATCAT+AGG - chr3_1:91800900-91800919 Msa0387730:intron 20.0%
!!! GTTAAAAATGGAGTCTTTTT+TGG - chr3_1:91797978-91797997 Msa0387730:CDS 25.0%
! ATTAAACGCATTAATCTTGA+TGG - chr3_1:91798053-91798072 Msa0387730:CDS 25.0%
! TTAAACGCATTAATCTTGAT+GGG - chr3_1:91798054-91798073 Msa0387730:CDS 25.0%
! TAGACTTGTAGAATATCTTA+TGG - chr3_1:91798197-91798216 Msa0387730:intron 25.0%
!!! TATCTTATGGTTTTACGTTT+TGG - chr3_1:91798210-91798229 Msa0387730:intron 25.0%
! AGAATAAAATGCGAGATAAT+AGG - chr3_1:91798244-91798263 Msa0387730:intron 25.0%
! GAGATAATAGGTTTATGAAA+TGG - chr3_1:91798256-91798275 Msa0387730:intron 25.0%
! TATAGTATTCACATCTGTAT+TGG + chr3_1:91798408-91798427 None:intergenic 25.0%
!!! ATAGTTTCTCTAGTTTTTCT+AGG + chr3_1:91798661-91798680 None:intergenic 25.0%
!!! GGATACAACACATTTTAATT+AGG + chr3_1:91798847-91798866 None:intergenic 25.0%
!! GTTTTACATTTGTCCTTTTT+AGG - chr3_1:91798870-91798889 Msa0387730:intron 25.0%
! TGAAAAGTTATCCTCATAAT+AGG - chr3_1:91798893-91798912 Msa0387730:intron 25.0%
! AAGTAATTAGTTACTTCTCT+TGG - chr3_1:91799019-91799038 Msa0387730:intron 25.0%
! TTGAGCCATGAATTATTTAT+TGG - chr3_1:91799046-91799065 Msa0387730:intron 25.0%
! TAGGCTTCTTATAAATCAAA+TGG - chr3_1:91799497-91799516 Msa0387730:intron 25.0%
!! GGTAAAATTTCTAAGAAGAT+AGG + chr3_1:91799542-91799561 None:intergenic 25.0%
! AACAACAATTATAAAACTGG+AGG + chr3_1:91799563-91799582 None:intergenic 25.0%
!! ACTTTATAGACCAATGTTTT+TGG - chr3_1:91799774-91799793 Msa0387730:intron 25.0%
!!! AAAAGCATTTCCAAAAACAT+TGG + chr3_1:91799787-91799806 None:intergenic 25.0%
! GTATTGAATTAAATTACTGG+TGG - chr3_1:91799813-91799832 Msa0387730:intron 25.0%
!!! TTCTATTTTTGGTCTCAAAT+AGG + chr3_1:91799891-91799910 None:intergenic 25.0%
!! TGTTCGGAATTTTCTATTTT+TGG + chr3_1:91799902-91799921 None:intergenic 25.0%
!!! TTAGGGTCTTTTGATTATTT+TGG + chr3_1:91800136-91800155 None:intergenic 25.0%
! ATCCATTCTAAACTGTAAAT+TGG - chr3_1:91800463-91800482 Msa0387730:intron 25.0%
! TCCATTCTAAACTGTAAATT+GGG - chr3_1:91800464-91800483 Msa0387730:intron 25.0%
! TTTGTTACATTATTCAAGCA+AGG + chr3_1:91800589-91800608 None:intergenic 25.0%
! TAGGAATGTTAATTATGCTA+TGG + chr3_1:91800630-91800649 None:intergenic 25.0%
!! AATTCTTCAAGTTCATCATT+AGG + chr3_1:91800649-91800668 None:intergenic 25.0%
!! CTTGAAGAATTACATTTTAG+AGG - chr3_1:91800658-91800677 Msa0387730:intron 25.0%
!!! TGCCCAATTTTTTAAAATTC+GGG - chr3_1:91800709-91800728 Msa0387730:intron 25.0%
! ATACTACTCAAGTTAAACAT+TGG + chr3_1:91800928-91800947 None:intergenic 25.0%
! TTTCGATTATGAAAGAAAGA+AGG - chr3_1:91800959-91800978 Msa0387730:intron 25.0%
! TTCGATTATGAAAGAAAGAA+GGG - chr3_1:91800960-91800979 Msa0387730:intron 25.0%
! ATAAGCTATAACAAGATGAA+AGG + chr3_1:91801121-91801140 None:intergenic 25.0%
! ATGCAATATTGAAGAATTGA+TGG - chr3_1:91801163-91801182 Msa0387730:intron 25.0%
! CAACTCAATATGACATTTAT+AGG + chr3_1:91801519-91801538 None:intergenic 25.0%
! TTCTTAACAATGTTCTTACT+AGG + chr3_1:91801575-91801594 None:intergenic 25.0%
!!! GTTAAAAATGGAGTCTTTTT+TGG - chr3_1:91797978-91797997 Msa0387730:CDS 25.0%
! ATTAAACGCATTAATCTTGA+TGG - chr3_1:91798053-91798072 Msa0387730:CDS 25.0%
! TTAAACGCATTAATCTTGAT+GGG - chr3_1:91798054-91798073 Msa0387730:CDS 25.0%
! TAGACTTGTAGAATATCTTA+TGG - chr3_1:91798197-91798216 Msa0387730:intron 25.0%
!!! TATCTTATGGTTTTACGTTT+TGG - chr3_1:91798210-91798229 Msa0387730:intron 25.0%
! AGAATAAAATGCGAGATAAT+AGG - chr3_1:91798244-91798263 Msa0387730:intron 25.0%
! GAGATAATAGGTTTATGAAA+TGG - chr3_1:91798256-91798275 Msa0387730:intron 25.0%
! TATAGTATTCACATCTGTAT+TGG + chr3_1:91798408-91798427 None:intergenic 25.0%
!!! ATAGTTTCTCTAGTTTTTCT+AGG + chr3_1:91798661-91798680 None:intergenic 25.0%
!!! GGATACAACACATTTTAATT+AGG + chr3_1:91798847-91798866 None:intergenic 25.0%
!! GTTTTACATTTGTCCTTTTT+AGG - chr3_1:91798870-91798889 Msa0387730:intron 25.0%
! TGAAAAGTTATCCTCATAAT+AGG - chr3_1:91798893-91798912 Msa0387730:intron 25.0%
! AAGTAATTAGTTACTTCTCT+TGG - chr3_1:91799019-91799038 Msa0387730:intron 25.0%
! TTGAGCCATGAATTATTTAT+TGG - chr3_1:91799046-91799065 Msa0387730:intron 25.0%
! TAGGCTTCTTATAAATCAAA+TGG - chr3_1:91799497-91799516 Msa0387730:intron 25.0%
!! GGTAAAATTTCTAAGAAGAT+AGG + chr3_1:91799542-91799561 None:intergenic 25.0%
! AACAACAATTATAAAACTGG+AGG + chr3_1:91799563-91799582 None:intergenic 25.0%
!! ACTTTATAGACCAATGTTTT+TGG - chr3_1:91799774-91799793 Msa0387730:intron 25.0%
!!! AAAAGCATTTCCAAAAACAT+TGG + chr3_1:91799787-91799806 None:intergenic 25.0%
! GTATTGAATTAAATTACTGG+TGG - chr3_1:91799813-91799832 Msa0387730:intron 25.0%
!!! TTCTATTTTTGGTCTCAAAT+AGG + chr3_1:91799891-91799910 None:intergenic 25.0%
!! TGTTCGGAATTTTCTATTTT+TGG + chr3_1:91799902-91799921 None:intergenic 25.0%
!!! TTAGGGTCTTTTGATTATTT+TGG + chr3_1:91800136-91800155 None:intergenic 25.0%
! ATCCATTCTAAACTGTAAAT+TGG - chr3_1:91800463-91800482 Msa0387730:intron 25.0%
! TCCATTCTAAACTGTAAATT+GGG - chr3_1:91800464-91800483 Msa0387730:intron 25.0%
! TTTGTTACATTATTCAAGCA+AGG + chr3_1:91800589-91800608 None:intergenic 25.0%
! TAGGAATGTTAATTATGCTA+TGG + chr3_1:91800630-91800649 None:intergenic 25.0%
!! AATTCTTCAAGTTCATCATT+AGG + chr3_1:91800649-91800668 None:intergenic 25.0%
!! CTTGAAGAATTACATTTTAG+AGG - chr3_1:91800658-91800677 Msa0387730:intron 25.0%
!!! TGCCCAATTTTTTAAAATTC+GGG - chr3_1:91800709-91800728 Msa0387730:intron 25.0%
! ATACTACTCAAGTTAAACAT+TGG + chr3_1:91800928-91800947 None:intergenic 25.0%
! TTTCGATTATGAAAGAAAGA+AGG - chr3_1:91800959-91800978 Msa0387730:intron 25.0%
! TTCGATTATGAAAGAAAGAA+GGG - chr3_1:91800960-91800979 Msa0387730:intron 25.0%
! ATAAGCTATAACAAGATGAA+AGG + chr3_1:91801121-91801140 None:intergenic 25.0%
! ATGCAATATTGAAGAATTGA+TGG - chr3_1:91801163-91801182 Msa0387730:intron 25.0%
! CAACTCAATATGACATTTAT+AGG + chr3_1:91801519-91801538 None:intergenic 25.0%
! TTCTTAACAATGTTCTTACT+AGG + chr3_1:91801575-91801594 None:intergenic 25.0%
AAAGAGAAGAAGAAGAAGAA+AGG - chr3_1:91797633-91797652 Msa0387730:three_prime_UTR 30.0%
GAAATAGAGTGTAGAAACAT+AGG + chr3_1:91797749-91797768 None:intergenic 30.0%
! ATCTGAAGCAAAAATGAAGA+TGG - chr3_1:91797839-91797858 Msa0387730:three_prime_UTR 30.0%
TTTGAAAAATCCTTACCTTG+AGG + chr3_1:91797878-91797897 None:intergenic 30.0%
!! TGTTCTGGGTTAGTTAAAAA+TGG - chr3_1:91797966-91797985 Msa0387730:CDS 30.0%
GTACTAGTTAAAGAACAGTA+AGG - chr3_1:91798326-91798345 Msa0387730:intron 30.0%
ATGCCTATGTCTATATTGAA+TGG - chr3_1:91798456-91798475 Msa0387730:intron 30.0%
TGATAGAAACTAGACTTAAG+TGG - chr3_1:91798545-91798564 Msa0387730:intron 30.0%
AAAGGACAAATGTAAAACAG+TGG + chr3_1:91798868-91798887 None:intergenic 30.0%
! GGATAACTTTTCACCTAAAA+AGG + chr3_1:91798886-91798905 None:intergenic 30.0%
AATTGGCTATTCCTATTATG+AGG + chr3_1:91798907-91798926 None:intergenic 30.0%
GTCTAGATTATGAGTGAAAT+TGG + chr3_1:91798924-91798943 None:intergenic 30.0%
AATTAGTTACTTCTCTTGGA+AGG - chr3_1:91799023-91799042 Msa0387730:intron 30.0%
AGCCATGAATTATTTATTGG+CGG - chr3_1:91799049-91799068 Msa0387730:intron 30.0%
TTCATAAAATGTCCAAAGCT+CGG + chr3_1:91799145-91799164 None:intergenic 30.0%
TCAAATAGCTACTGTAGTTA+TGG - chr3_1:91799287-91799306 Msa0387730:intron 30.0%
CAAATAGCTACTGTAGTTAT+GGG - chr3_1:91799288-91799307 Msa0387730:intron 30.0%
TGAATAATGCCAAAAGATTG+TGG + chr3_1:91799605-91799624 None:intergenic 30.0%
ACTATTCTGACATAAAGTAG+TGG - chr3_1:91799626-91799645 Msa0387730:CDS 30.0%
!!! ACATCACGTAAGTTGTTTTT+AGG + chr3_1:91799750-91799769 None:intergenic 30.0%
TTAGACTTGATTCTTATGGT+AGG + chr3_1:91799976-91799995 None:intergenic 30.0%
TACCATAAGAATCAAGTCTA+AGG - chr3_1:91799975-91799994 Msa0387730:CDS 30.0%
TTCCTTAGACTTGATTCTTA+TGG + chr3_1:91799980-91799999 None:intergenic 30.0%
TGGAGAACAAAATTGAACTT+GGG - chr3_1:91800022-91800041 Msa0387730:CDS 30.0%
!!! CACTGTTTTGAAAAACCATT+AGG + chr3_1:91800054-91800073 None:intergenic 30.0%
! TTGTTATAATGCTACTTGCA+GGG + chr3_1:91800077-91800096 None:intergenic 30.0%
AGTAGCATTATAACAACTTG+TGG - chr3_1:91800081-91800100 Msa0387730:intron 30.0%
TCTTATAGTCTAACCCATAA+AGG - chr3_1:91800200-91800219 Msa0387730:intron 30.0%
TTGCTCATATTAGATTGATG+TGG + chr3_1:91800515-91800534 None:intergenic 30.0%
ATTATTCAAGCAAGGTTTAC+CGG + chr3_1:91800581-91800600 None:intergenic 30.0%
!!! GCCCAATTTTTTAAAATTCG+GGG - chr3_1:91800710-91800729 Msa0387730:intron 30.0%
!! GCCCCGAATTTTAAAAAATT+GGG + chr3_1:91800714-91800733 None:intergenic 30.0%
!! TGCCCCGAATTTTAAAAAAT+TGG + chr3_1:91800715-91800734 None:intergenic 30.0%
GAAACAACAAATCATGAAGT+TGG + chr3_1:91800887-91800906 None:intergenic 30.0%
GAAAACAATTCTTGAGCAAT+AGG + chr3_1:91801070-91801089 None:intergenic 30.0%
GCATTATTGCTAATGTATGT+AGG - chr3_1:91801204-91801223 Msa0387730:intron 30.0%
! TTGTCATTTGAATGAGAAGT+AGG - chr3_1:91801468-91801487 Msa0387730:exon 30.0%
AAAGAGAAGAAGAAGAAGAA+AGG - chr3_1:91797633-91797652 Msa0387730:three_prime_UTR 30.0%
GAAATAGAGTGTAGAAACAT+AGG + chr3_1:91797749-91797768 None:intergenic 30.0%
! ATCTGAAGCAAAAATGAAGA+TGG - chr3_1:91797839-91797858 Msa0387730:three_prime_UTR 30.0%
TTTGAAAAATCCTTACCTTG+AGG + chr3_1:91797878-91797897 None:intergenic 30.0%
!! TGTTCTGGGTTAGTTAAAAA+TGG - chr3_1:91797966-91797985 Msa0387730:CDS 30.0%
GTACTAGTTAAAGAACAGTA+AGG - chr3_1:91798326-91798345 Msa0387730:intron 30.0%
ATGCCTATGTCTATATTGAA+TGG - chr3_1:91798456-91798475 Msa0387730:intron 30.0%
TGATAGAAACTAGACTTAAG+TGG - chr3_1:91798545-91798564 Msa0387730:intron 30.0%
AAAGGACAAATGTAAAACAG+TGG + chr3_1:91798868-91798887 None:intergenic 30.0%
! GGATAACTTTTCACCTAAAA+AGG + chr3_1:91798886-91798905 None:intergenic 30.0%
AATTGGCTATTCCTATTATG+AGG + chr3_1:91798907-91798926 None:intergenic 30.0%
GTCTAGATTATGAGTGAAAT+TGG + chr3_1:91798924-91798943 None:intergenic 30.0%
AATTAGTTACTTCTCTTGGA+AGG - chr3_1:91799023-91799042 Msa0387730:intron 30.0%
AGCCATGAATTATTTATTGG+CGG - chr3_1:91799049-91799068 Msa0387730:intron 30.0%
TTCATAAAATGTCCAAAGCT+CGG + chr3_1:91799145-91799164 None:intergenic 30.0%
TCAAATAGCTACTGTAGTTA+TGG - chr3_1:91799287-91799306 Msa0387730:intron 30.0%
CAAATAGCTACTGTAGTTAT+GGG - chr3_1:91799288-91799307 Msa0387730:intron 30.0%
TGAATAATGCCAAAAGATTG+TGG + chr3_1:91799605-91799624 None:intergenic 30.0%
ACTATTCTGACATAAAGTAG+TGG - chr3_1:91799626-91799645 Msa0387730:CDS 30.0%
!!! ACATCACGTAAGTTGTTTTT+AGG + chr3_1:91799750-91799769 None:intergenic 30.0%
TTAGACTTGATTCTTATGGT+AGG + chr3_1:91799976-91799995 None:intergenic 30.0%
TACCATAAGAATCAAGTCTA+AGG - chr3_1:91799975-91799994 Msa0387730:CDS 30.0%
TTCCTTAGACTTGATTCTTA+TGG + chr3_1:91799980-91799999 None:intergenic 30.0%
TGGAGAACAAAATTGAACTT+GGG - chr3_1:91800022-91800041 Msa0387730:CDS 30.0%
!!! CACTGTTTTGAAAAACCATT+AGG + chr3_1:91800054-91800073 None:intergenic 30.0%
! TTGTTATAATGCTACTTGCA+GGG + chr3_1:91800077-91800096 None:intergenic 30.0%
AGTAGCATTATAACAACTTG+TGG - chr3_1:91800081-91800100 Msa0387730:intron 30.0%
TCTTATAGTCTAACCCATAA+AGG - chr3_1:91800200-91800219 Msa0387730:intron 30.0%
TTGCTCATATTAGATTGATG+TGG + chr3_1:91800515-91800534 None:intergenic 30.0%
ATTATTCAAGCAAGGTTTAC+CGG + chr3_1:91800581-91800600 None:intergenic 30.0%
!!! GCCCAATTTTTTAAAATTCG+GGG - chr3_1:91800710-91800729 Msa0387730:intron 30.0%
!! GCCCCGAATTTTAAAAAATT+GGG + chr3_1:91800714-91800733 None:intergenic 30.0%
!! TGCCCCGAATTTTAAAAAAT+TGG + chr3_1:91800715-91800734 None:intergenic 30.0%
GAAACAACAAATCATGAAGT+TGG + chr3_1:91800887-91800906 None:intergenic 30.0%
GAAAACAATTCTTGAGCAAT+AGG + chr3_1:91801070-91801089 None:intergenic 30.0%
GCATTATTGCTAATGTATGT+AGG - chr3_1:91801204-91801223 Msa0387730:intron 30.0%
! TTGTCATTTGAATGAGAAGT+AGG - chr3_1:91801468-91801487 Msa0387730:exon 30.0%
AGAAGAAGAAGAAAGGATCT+TGG - chr3_1:91797640-91797659 Msa0387730:three_prime_UTR 35.0%
! GTTGCATTTTCACAAACACT+TGG + chr3_1:91797945-91797964 None:intergenic 35.0%
! TGTGAAAATGCAACTTGTTC+TGG - chr3_1:91797951-91797970 Msa0387730:CDS 35.0%
! GTGAAAATGCAACTTGTTCT+GGG - chr3_1:91797952-91797971 Msa0387730:CDS 35.0%
! GTTTTTGTGTTTTCAGAGAG+CGG - chr3_1:91798022-91798041 Msa0387730:CDS 35.0%
ACGCCATTCAATATAGACAT+AGG + chr3_1:91798462-91798481 None:intergenic 35.0%
ACTTAAGTGGTTTATGCATG+TGG - chr3_1:91798558-91798577 Msa0387730:intron 35.0%
AGATCTAGAGATCAATGAGA+TGG - chr3_1:91798687-91798706 Msa0387730:intron 35.0%
CAATGAGATGGAGAAAGATA+TGG - chr3_1:91798699-91798718 Msa0387730:intron 35.0%
TCATGTAGGGGAATAAGATT+TGG - chr3_1:91798753-91798772 Msa0387730:intron 35.0%
! GATGTTGATGTTGTCTCTTT+TGG - chr3_1:91798778-91798797 Msa0387730:intron 35.0%
! TGATGTTGTCTCTTTTGGTA+AGG - chr3_1:91798783-91798802 Msa0387730:intron 35.0%
GCCATGAATTATTTATTGGC+GGG - chr3_1:91799050-91799069 Msa0387730:intron 35.0%
TCCCGCCAATAAATAATTCA+TGG + chr3_1:91799054-91799073 None:intergenic 35.0%
TCATAAAATGTCCAAAGCTC+GGG + chr3_1:91799144-91799163 None:intergenic 35.0%
!! ATGAACTTTTGTTTAGCGTC+TGG - chr3_1:91799160-91799179 Msa0387730:intron 35.0%
! TCACGATTAGGAGTATAAGT+TGG + chr3_1:91799324-91799343 None:intergenic 35.0%
! TTTCTTGTGCCACAATCTTT+TGG - chr3_1:91799593-91799612 Msa0387730:CDS 35.0%
AATAACATCTGTAGGGTCTT+TGG + chr3_1:91799703-91799722 None:intergenic 35.0%
CTTTGCGAATAACATCTGTA+GGG + chr3_1:91799710-91799729 None:intergenic 35.0%
CGATCTCATTTCATACTGTT+CGG + chr3_1:91799918-91799937 None:intergenic 35.0%
CAGTATGAAATGAGATCGTA+AGG - chr3_1:91799920-91799939 Msa0387730:CDS 35.0%
GTGGAGAACAAAATTGAACT+TGG - chr3_1:91800021-91800040 Msa0387730:CDS 35.0%
GGAGAACAAAATTGAACTTG+GGG - chr3_1:91800023-91800042 Msa0387730:CDS 35.0%
AACAAAATTGAACTTGGGGT+AGG - chr3_1:91800027-91800046 Msa0387730:CDS 35.0%
! GTTGTTATAATGCTACTTGC+AGG + chr3_1:91800078-91800097 None:intergenic 35.0%
AATTGTAATTTGGCCCCAAA+TGG + chr3_1:91800233-91800252 None:intergenic 35.0%
AACTATTCATCCTATGTTGC+TGG - chr3_1:91800363-91800382 Msa0387730:intron 35.0%
!! TCTCTTGACTCGTTTTTCTA+TGG - chr3_1:91800392-91800411 Msa0387730:intron 35.0%
AAGTTCAACAGAGTCATTAG+AGG + chr3_1:91800434-91800453 None:intergenic 35.0%
GCCCAATTTACAGTTTAGAA+TGG + chr3_1:91800468-91800487 None:intergenic 35.0%
TTGATGTGGAATGATGAAAG+TGG + chr3_1:91800501-91800520 None:intergenic 35.0%
! AGGCCAAGTGAAAGTTTTTA+GGG - chr3_1:91800678-91800697 Msa0387730:intron 35.0%
TCTCCCTAAAAACTTTCACT+TGG + chr3_1:91800684-91800703 None:intergenic 35.0%
! TATGAAAGAAAGAAGGGCAT+TGG - chr3_1:91800966-91800985 Msa0387730:intron 35.0%
!! ATGAAAGAAAGAAGGGCATT+GGG - chr3_1:91800967-91800986 Msa0387730:intron 35.0%
ATTGCTAATGTATGTAGGAC+AGG - chr3_1:91801209-91801228 Msa0387730:intron 35.0%
TTGCTAATGTATGTAGGACA+GGG - chr3_1:91801210-91801229 Msa0387730:intron 35.0%
AATGATTCGAGCACAGAAAA+AGG - chr3_1:91801348-91801367 Msa0387730:intron 35.0%
TAGCAAAAAGAGTGAAGCAT+AGG - chr3_1:91801426-91801445 Msa0387730:intron 35.0%
!! CTACCATTTTGGCATTCTAA+AGG - chr3_1:91801662-91801681 Msa0387730:five_prime_UTR 35.0%
!! GTACCTTTAGAATGCCAAAA+TGG + chr3_1:91801668-91801687 None:intergenic 35.0%
! TGGCATTCTAAAGGTACATT+TGG - chr3_1:91801671-91801690 Msa0387730:five_prime_UTR 35.0%
AGAAGAAGAAGAAAGGATCT+TGG - chr3_1:91797640-91797659 Msa0387730:three_prime_UTR 35.0%
! GTTGCATTTTCACAAACACT+TGG + chr3_1:91797945-91797964 None:intergenic 35.0%
! TGTGAAAATGCAACTTGTTC+TGG - chr3_1:91797951-91797970 Msa0387730:CDS 35.0%
! GTGAAAATGCAACTTGTTCT+GGG - chr3_1:91797952-91797971 Msa0387730:CDS 35.0%
! GTTTTTGTGTTTTCAGAGAG+CGG - chr3_1:91798022-91798041 Msa0387730:CDS 35.0%
ACGCCATTCAATATAGACAT+AGG + chr3_1:91798462-91798481 None:intergenic 35.0%
ACTTAAGTGGTTTATGCATG+TGG - chr3_1:91798558-91798577 Msa0387730:intron 35.0%
AGATCTAGAGATCAATGAGA+TGG - chr3_1:91798687-91798706 Msa0387730:intron 35.0%
CAATGAGATGGAGAAAGATA+TGG - chr3_1:91798699-91798718 Msa0387730:intron 35.0%
TCATGTAGGGGAATAAGATT+TGG - chr3_1:91798753-91798772 Msa0387730:intron 35.0%
! GATGTTGATGTTGTCTCTTT+TGG - chr3_1:91798778-91798797 Msa0387730:intron 35.0%
! TGATGTTGTCTCTTTTGGTA+AGG - chr3_1:91798783-91798802 Msa0387730:intron 35.0%
GCCATGAATTATTTATTGGC+GGG - chr3_1:91799050-91799069 Msa0387730:intron 35.0%
TCCCGCCAATAAATAATTCA+TGG + chr3_1:91799054-91799073 None:intergenic 35.0%
TCATAAAATGTCCAAAGCTC+GGG + chr3_1:91799144-91799163 None:intergenic 35.0%
!! ATGAACTTTTGTTTAGCGTC+TGG - chr3_1:91799160-91799179 Msa0387730:intron 35.0%
! TCACGATTAGGAGTATAAGT+TGG + chr3_1:91799324-91799343 None:intergenic 35.0%
! TTTCTTGTGCCACAATCTTT+TGG - chr3_1:91799593-91799612 Msa0387730:CDS 35.0%
AATAACATCTGTAGGGTCTT+TGG + chr3_1:91799703-91799722 None:intergenic 35.0%
CTTTGCGAATAACATCTGTA+GGG + chr3_1:91799710-91799729 None:intergenic 35.0%
CGATCTCATTTCATACTGTT+CGG + chr3_1:91799918-91799937 None:intergenic 35.0%
CAGTATGAAATGAGATCGTA+AGG - chr3_1:91799920-91799939 Msa0387730:CDS 35.0%
GTGGAGAACAAAATTGAACT+TGG - chr3_1:91800021-91800040 Msa0387730:CDS 35.0%
GGAGAACAAAATTGAACTTG+GGG - chr3_1:91800023-91800042 Msa0387730:CDS 35.0%
AACAAAATTGAACTTGGGGT+AGG - chr3_1:91800027-91800046 Msa0387730:CDS 35.0%
! GTTGTTATAATGCTACTTGC+AGG + chr3_1:91800078-91800097 None:intergenic 35.0%
AATTGTAATTTGGCCCCAAA+TGG + chr3_1:91800233-91800252 None:intergenic 35.0%
AACTATTCATCCTATGTTGC+TGG - chr3_1:91800363-91800382 Msa0387730:intron 35.0%
!! TCTCTTGACTCGTTTTTCTA+TGG - chr3_1:91800392-91800411 Msa0387730:intron 35.0%
AAGTTCAACAGAGTCATTAG+AGG + chr3_1:91800434-91800453 None:intergenic 35.0%
GCCCAATTTACAGTTTAGAA+TGG + chr3_1:91800468-91800487 None:intergenic 35.0%
TTGATGTGGAATGATGAAAG+TGG + chr3_1:91800501-91800520 None:intergenic 35.0%
! AGGCCAAGTGAAAGTTTTTA+GGG - chr3_1:91800678-91800697 Msa0387730:intron 35.0%
TCTCCCTAAAAACTTTCACT+TGG + chr3_1:91800684-91800703 None:intergenic 35.0%
! TATGAAAGAAAGAAGGGCAT+TGG - chr3_1:91800966-91800985 Msa0387730:intron 35.0%
!! ATGAAAGAAAGAAGGGCATT+GGG - chr3_1:91800967-91800986 Msa0387730:intron 35.0%
ATTGCTAATGTATGTAGGAC+AGG - chr3_1:91801209-91801228 Msa0387730:intron 35.0%
TTGCTAATGTATGTAGGACA+GGG - chr3_1:91801210-91801229 Msa0387730:intron 35.0%
AATGATTCGAGCACAGAAAA+AGG - chr3_1:91801348-91801367 Msa0387730:intron 35.0%
TAGCAAAAAGAGTGAAGCAT+AGG - chr3_1:91801426-91801445 Msa0387730:intron 35.0%
!! CTACCATTTTGGCATTCTAA+AGG - chr3_1:91801662-91801681 Msa0387730:five_prime_UTR 35.0%
!! GTACCTTTAGAATGCCAAAA+TGG + chr3_1:91801668-91801687 None:intergenic 35.0%
! TGGCATTCTAAAGGTACATT+TGG - chr3_1:91801671-91801690 Msa0387730:five_prime_UTR 35.0%
AATCCTTACCTTGAGGTTGA+AGG + chr3_1:91797871-91797890 None:intergenic 40.0%
GTTCCCATTTCCCAAACATT+TGG - chr3_1:91798278-91798297 Msa0387730:intron 40.0%
CAGCCAAATGTTTGGGAAAT+GGG + chr3_1:91798284-91798303 None:intergenic 40.0%
TCAGCCAAATGTTTGGGAAA+TGG + chr3_1:91798285-91798304 None:intergenic 40.0%
TTCCCAAACATTTGGCTGAT+TGG - chr3_1:91798286-91798305 Msa0387730:intron 40.0%
AGCCAATCAGCCAAATGTTT+GGG + chr3_1:91798291-91798310 None:intergenic 40.0%
AAGCCAATCAGCCAAATGTT+TGG + chr3_1:91798292-91798311 None:intergenic 40.0%
AGTAAGGAGAGTAGATCAGA+TGG - chr3_1:91798603-91798622 Msa0387730:intron 40.0%
TGACGTCGTTTGATTCATGT+AGG - chr3_1:91798739-91798758 Msa0387730:intron 40.0%
GACGTCGTTTGATTCATGTA+GGG - chr3_1:91798740-91798759 Msa0387730:intron 40.0%
ACGTCGTTTGATTCATGTAG+GGG - chr3_1:91798741-91798760 Msa0387730:intron 40.0%
GATTCATATGTTCCTCATGC+AGG - chr3_1:91799245-91799264 Msa0387730:intron 40.0%
AGCTACTGTAGTTATGGGAA+AGG - chr3_1:91799293-91799312 Msa0387730:intron 40.0%
TATACTCCTAATCGTGACGA+TGG - chr3_1:91799327-91799346 Msa0387730:intron 40.0%
ATATCTCCATCGTCACGATT+AGG + chr3_1:91799336-91799355 None:intergenic 40.0%
GACATAAAGTAGTGGCATGT+AGG - chr3_1:91799634-91799653 Msa0387730:intron 40.0%
TCAGAGTTCTTTGCTTAAGG+TGG + chr3_1:91799668-91799687 None:intergenic 40.0%
CCTTCAGAGTTCTTTGCTTA+AGG + chr3_1:91799671-91799690 None:intergenic 40.0%
CCTTAAGCAAAGAACTCTGA+AGG - chr3_1:91799668-91799687 Msa0387730:intron 40.0%
! AAGAACTCTGAAGGATCAGA+TGG - chr3_1:91799677-91799696 Msa0387730:intron 40.0%
GCTTTGCGAATAACATCTGT+AGG + chr3_1:91799711-91799730 None:intergenic 40.0%
AGTCTAAGGAAAGTGACTTG+AGG - chr3_1:91799989-91800008 Msa0387730:CDS 40.0%
GTCTAAGGAAAGTGACTTGA+GGG - chr3_1:91799990-91800009 Msa0387730:CDS 40.0%
!! TGACTTGAGGGTATCTTTAG+TGG - chr3_1:91800002-91800021 Msa0387730:CDS 40.0%
AAATGGTCATGGGCCTTTAT+GGG + chr3_1:91800216-91800235 None:intergenic 40.0%
ATAAAGGCCCATGACCATTT+GGG - chr3_1:91800216-91800235 Msa0387730:intron 40.0%
TGTCTCGTAAACGAAATAGC+TGG + chr3_1:91800340-91800359 None:intergenic 40.0%
GAGATTTACTCCAGCAACAT+AGG + chr3_1:91800376-91800395 None:intergenic 40.0%
! AGTTTAGAATGGATGACAGC+AGG + chr3_1:91800457-91800476 None:intergenic 40.0%
TTCACCACCAAAACTTTCAC+CGG - chr3_1:91800559-91800578 Msa0387730:intron 40.0%
!! TTTACCGGTGAAAGTTTTGG+TGG + chr3_1:91800566-91800585 None:intergenic 40.0%
! AGGTTTACCGGTGAAAGTTT+TGG + chr3_1:91800569-91800588 None:intergenic 40.0%
! GAGGCCAAGTGAAAGTTTTT+AGG - chr3_1:91800677-91800696 Msa0387730:intron 40.0%
CCATTCTACGTCATCACAAA+AGG + chr3_1:91800747-91800766 None:intergenic 40.0%
!! CCTTTTGTGATGACGTAGAA+TGG - chr3_1:91800744-91800763 Msa0387730:intron 40.0%
TCCTGTAGCTGGACATTAAT+TGG + chr3_1:91800787-91800806 None:intergenic 40.0%
TTAATGTCCAGCTACAGGAA+TGG - chr3_1:91800788-91800807 Msa0387730:intron 40.0%
CAACAAATCATGAAGTTGGC+TGG + chr3_1:91800883-91800902 None:intergenic 40.0%
!! TGAAAGAAAGAAGGGCATTG+GGG - chr3_1:91800968-91800987 Msa0387730:intron 40.0%
GCACATGTATGAAAATGACC+TGG + chr3_1:91801028-91801047 None:intergenic 40.0%
TCATACATGTGCAGAGATGA+AGG - chr3_1:91801036-91801055 Msa0387730:intron 40.0%
CAGGGAAGATCCTTAATTTC+CGG + chr3_1:91801237-91801256 None:intergenic 40.0%
! TTCGAACCAGACTACCATTT+TGG - chr3_1:91801651-91801670 Msa0387730:five_prime_UTR 40.0%
AGAATGCCAAAATGGTAGTC+TGG + chr3_1:91801660-91801679 None:intergenic 40.0%
AATCCTTACCTTGAGGTTGA+AGG + chr3_1:91797871-91797890 None:intergenic 40.0%
GTTCCCATTTCCCAAACATT+TGG - chr3_1:91798278-91798297 Msa0387730:intron 40.0%
CAGCCAAATGTTTGGGAAAT+GGG + chr3_1:91798284-91798303 None:intergenic 40.0%
TCAGCCAAATGTTTGGGAAA+TGG + chr3_1:91798285-91798304 None:intergenic 40.0%
TTCCCAAACATTTGGCTGAT+TGG - chr3_1:91798286-91798305 Msa0387730:intron 40.0%
AGCCAATCAGCCAAATGTTT+GGG + chr3_1:91798291-91798310 None:intergenic 40.0%
AAGCCAATCAGCCAAATGTT+TGG + chr3_1:91798292-91798311 None:intergenic 40.0%
AGTAAGGAGAGTAGATCAGA+TGG - chr3_1:91798603-91798622 Msa0387730:intron 40.0%
TGACGTCGTTTGATTCATGT+AGG - chr3_1:91798739-91798758 Msa0387730:intron 40.0%
GACGTCGTTTGATTCATGTA+GGG - chr3_1:91798740-91798759 Msa0387730:intron 40.0%
ACGTCGTTTGATTCATGTAG+GGG - chr3_1:91798741-91798760 Msa0387730:intron 40.0%
GATTCATATGTTCCTCATGC+AGG - chr3_1:91799245-91799264 Msa0387730:intron 40.0%
AGCTACTGTAGTTATGGGAA+AGG - chr3_1:91799293-91799312 Msa0387730:intron 40.0%
TATACTCCTAATCGTGACGA+TGG - chr3_1:91799327-91799346 Msa0387730:intron 40.0%
ATATCTCCATCGTCACGATT+AGG + chr3_1:91799336-91799355 None:intergenic 40.0%
GACATAAAGTAGTGGCATGT+AGG - chr3_1:91799634-91799653 Msa0387730:intron 40.0%
TCAGAGTTCTTTGCTTAAGG+TGG + chr3_1:91799668-91799687 None:intergenic 40.0%
CCTTCAGAGTTCTTTGCTTA+AGG + chr3_1:91799671-91799690 None:intergenic 40.0%
CCTTAAGCAAAGAACTCTGA+AGG - chr3_1:91799668-91799687 Msa0387730:intron 40.0%
! AAGAACTCTGAAGGATCAGA+TGG - chr3_1:91799677-91799696 Msa0387730:intron 40.0%
GCTTTGCGAATAACATCTGT+AGG + chr3_1:91799711-91799730 None:intergenic 40.0%
AGTCTAAGGAAAGTGACTTG+AGG - chr3_1:91799989-91800008 Msa0387730:CDS 40.0%
GTCTAAGGAAAGTGACTTGA+GGG - chr3_1:91799990-91800009 Msa0387730:CDS 40.0%
!! TGACTTGAGGGTATCTTTAG+TGG - chr3_1:91800002-91800021 Msa0387730:CDS 40.0%
AAATGGTCATGGGCCTTTAT+GGG + chr3_1:91800216-91800235 None:intergenic 40.0%
ATAAAGGCCCATGACCATTT+GGG - chr3_1:91800216-91800235 Msa0387730:intron 40.0%
TGTCTCGTAAACGAAATAGC+TGG + chr3_1:91800340-91800359 None:intergenic 40.0%
GAGATTTACTCCAGCAACAT+AGG + chr3_1:91800376-91800395 None:intergenic 40.0%
! AGTTTAGAATGGATGACAGC+AGG + chr3_1:91800457-91800476 None:intergenic 40.0%
TTCACCACCAAAACTTTCAC+CGG - chr3_1:91800559-91800578 Msa0387730:intron 40.0%
!! TTTACCGGTGAAAGTTTTGG+TGG + chr3_1:91800566-91800585 None:intergenic 40.0%
! AGGTTTACCGGTGAAAGTTT+TGG + chr3_1:91800569-91800588 None:intergenic 40.0%
! GAGGCCAAGTGAAAGTTTTT+AGG - chr3_1:91800677-91800696 Msa0387730:intron 40.0%
CCATTCTACGTCATCACAAA+AGG + chr3_1:91800747-91800766 None:intergenic 40.0%
!! CCTTTTGTGATGACGTAGAA+TGG - chr3_1:91800744-91800763 Msa0387730:intron 40.0%
TCCTGTAGCTGGACATTAAT+TGG + chr3_1:91800787-91800806 None:intergenic 40.0%
TTAATGTCCAGCTACAGGAA+TGG - chr3_1:91800788-91800807 Msa0387730:intron 40.0%
CAACAAATCATGAAGTTGGC+TGG + chr3_1:91800883-91800902 None:intergenic 40.0%
!! TGAAAGAAAGAAGGGCATTG+GGG - chr3_1:91800968-91800987 Msa0387730:intron 40.0%
GCACATGTATGAAAATGACC+TGG + chr3_1:91801028-91801047 None:intergenic 40.0%
TCATACATGTGCAGAGATGA+AGG - chr3_1:91801036-91801055 Msa0387730:intron 40.0%
CAGGGAAGATCCTTAATTTC+CGG + chr3_1:91801237-91801256 None:intergenic 40.0%
! TTCGAACCAGACTACCATTT+TGG - chr3_1:91801651-91801670 Msa0387730:five_prime_UTR 40.0%
AGAATGCCAAAATGGTAGTC+TGG + chr3_1:91801660-91801679 None:intergenic 40.0%
GGTAAACTCCTTCAACCTCA+AGG - chr3_1:91797860-91797879 Msa0387730:exon 45.0%
ACTCCTTCAACCTCAAGGTA+AGG - chr3_1:91797865-91797884 Msa0387730:exon 45.0%
!! GCATTAATCTTGATGGGCTC+CGG - chr3_1:91798060-91798079 Msa0387730:CDS 45.0%
TCCCAAATCCGACACAGATA+CGG - chr3_1:91798378-91798397 Msa0387730:intron 45.0%
ACCGTATCTGTGTCGGATTT+GGG + chr3_1:91798382-91798401 None:intergenic 45.0%
TTGGTAGACCGTATCTGTGT+CGG + chr3_1:91798389-91798408 None:intergenic 45.0%
GCATGTGGATAGAAGTCATG+TGG - chr3_1:91798573-91798592 Msa0387730:intron 45.0%
GGATAGAAGTCATGTGGATG+TGG - chr3_1:91798579-91798598 Msa0387730:intron 45.0%
GTCATGTGGATGTGGTAGTA+AGG - chr3_1:91798587-91798606 Msa0387730:intron 45.0%
AGGAGAGTAGATCAGATGGA+AGG - chr3_1:91798607-91798626 Msa0387730:intron 45.0%
GGAGAGTAGATCAGATGGAA+GGG - chr3_1:91798608-91798627 Msa0387730:intron 45.0%
GAGGCAAATCACTAGAGGTA+GGG - chr3_1:91798630-91798649 Msa0387730:intron 45.0%
AGGCAAATCACTAGAGGTAG+GGG - chr3_1:91798631-91798650 Msa0387730:intron 45.0%
TGTAGAAGATTCCCGAGCTT+TGG - chr3_1:91799130-91799149 Msa0387730:intron 45.0%
TTTGTTTAGCGTCTGGACTC+TGG - chr3_1:91799167-91799186 Msa0387730:intron 45.0%
ATGTTCCTCATGCAGGTTCT+CGG - chr3_1:91799252-91799271 Msa0387730:intron 45.0%
GTGCATTGTGCTTAATGCCA+AGG - chr3_1:91799356-91799375 Msa0387730:intron 45.0%
CCAAGGATATTGCTGTGACT+GGG - chr3_1:91799373-91799392 Msa0387730:intron 45.0%
TGACAGACAAGGTCTACTAC+TGG - chr3_1:91799403-91799422 Msa0387730:intron 45.0%
AAGGTCTACTACTGGCATAC+AGG - chr3_1:91799411-91799430 Msa0387730:intron 45.0%
AGGTCTACTACTGGCATACA+GGG - chr3_1:91799412-91799431 Msa0387730:intron 45.0%
AGTAGTGGCATGTAGGTATG+TGG - chr3_1:91799641-91799660 Msa0387730:intron 45.0%
GTAGTGGCATGTAGGTATGT+GGG - chr3_1:91799642-91799661 Msa0387730:intron 45.0%
CTTATGGTAGGAAGCAGTTC+TGG + chr3_1:91799964-91799983 None:intergenic 45.0%
CAAATGGTCATGGGCCTTTA+TGG + chr3_1:91800217-91800236 None:intergenic 45.0%
CATAAAGGCCCATGACCATT+TGG - chr3_1:91800215-91800234 Msa0387730:intron 45.0%
TAAAGGCCCATGACCATTTG+GGG - chr3_1:91800217-91800236 Msa0387730:intron 45.0%
ATTTGGCCCCAAATGGTCAT+GGG + chr3_1:91800226-91800245 None:intergenic 45.0%
AATTTGGCCCCAAATGGTCA+TGG + chr3_1:91800227-91800246 None:intergenic 45.0%
CGTCATCACAAAAGGCTTGT+GGG + chr3_1:91800739-91800758 None:intergenic 45.0%
ACGTCATCACAAAAGGCTTG+TGG + chr3_1:91800740-91800759 None:intergenic 45.0%
GTAGCTGGACATTAATTGGC+AGG + chr3_1:91800783-91800802 None:intergenic 45.0%
GCCAATTAATGTCCAGCTAC+AGG - chr3_1:91800783-91800802 Msa0387730:intron 45.0%
ACATGTTCAGCTCATGTTGG+AGG + chr3_1:91800822-91800841 None:intergenic 45.0%
GTGACATGTTCAGCTCATGT+TGG + chr3_1:91800825-91800844 None:intergenic 45.0%
AATGTATGTAGGACAGGGAC+CGG - chr3_1:91801215-91801234 Msa0387730:CDS 45.0%
CGGAAATTAAGGATCTTCCC+TGG - chr3_1:91801235-91801254 Msa0387730:CDS 45.0%
! GGCATCACATAAGGTTCTAG+TGG + chr3_1:91801286-91801305 None:intergenic 45.0%
AACCTTATGTGATGCCTCCT+AGG - chr3_1:91801290-91801309 Msa0387730:intron 45.0%
GGTAAACTCCTTCAACCTCA+AGG - chr3_1:91797860-91797879 Msa0387730:exon 45.0%
ACTCCTTCAACCTCAAGGTA+AGG - chr3_1:91797865-91797884 Msa0387730:exon 45.0%
!! GCATTAATCTTGATGGGCTC+CGG - chr3_1:91798060-91798079 Msa0387730:CDS 45.0%
TCCCAAATCCGACACAGATA+CGG - chr3_1:91798378-91798397 Msa0387730:intron 45.0%
ACCGTATCTGTGTCGGATTT+GGG + chr3_1:91798382-91798401 None:intergenic 45.0%
TTGGTAGACCGTATCTGTGT+CGG + chr3_1:91798389-91798408 None:intergenic 45.0%
GCATGTGGATAGAAGTCATG+TGG - chr3_1:91798573-91798592 Msa0387730:intron 45.0%
GGATAGAAGTCATGTGGATG+TGG - chr3_1:91798579-91798598 Msa0387730:intron 45.0%
GTCATGTGGATGTGGTAGTA+AGG - chr3_1:91798587-91798606 Msa0387730:intron 45.0%
AGGAGAGTAGATCAGATGGA+AGG - chr3_1:91798607-91798626 Msa0387730:intron 45.0%
GGAGAGTAGATCAGATGGAA+GGG - chr3_1:91798608-91798627 Msa0387730:intron 45.0%
GAGGCAAATCACTAGAGGTA+GGG - chr3_1:91798630-91798649 Msa0387730:intron 45.0%
AGGCAAATCACTAGAGGTAG+GGG - chr3_1:91798631-91798650 Msa0387730:intron 45.0%
TGTAGAAGATTCCCGAGCTT+TGG - chr3_1:91799130-91799149 Msa0387730:intron 45.0%
TTTGTTTAGCGTCTGGACTC+TGG - chr3_1:91799167-91799186 Msa0387730:intron 45.0%
ATGTTCCTCATGCAGGTTCT+CGG - chr3_1:91799252-91799271 Msa0387730:intron 45.0%
GTGCATTGTGCTTAATGCCA+AGG - chr3_1:91799356-91799375 Msa0387730:intron 45.0%
CCAAGGATATTGCTGTGACT+GGG - chr3_1:91799373-91799392 Msa0387730:intron 45.0%
TGACAGACAAGGTCTACTAC+TGG - chr3_1:91799403-91799422 Msa0387730:intron 45.0%
AAGGTCTACTACTGGCATAC+AGG - chr3_1:91799411-91799430 Msa0387730:intron 45.0%
AGGTCTACTACTGGCATACA+GGG - chr3_1:91799412-91799431 Msa0387730:intron 45.0%
AGTAGTGGCATGTAGGTATG+TGG - chr3_1:91799641-91799660 Msa0387730:intron 45.0%
GTAGTGGCATGTAGGTATGT+GGG - chr3_1:91799642-91799661 Msa0387730:intron 45.0%
CTTATGGTAGGAAGCAGTTC+TGG + chr3_1:91799964-91799983 None:intergenic 45.0%
CAAATGGTCATGGGCCTTTA+TGG + chr3_1:91800217-91800236 None:intergenic 45.0%
CATAAAGGCCCATGACCATT+TGG - chr3_1:91800215-91800234 Msa0387730:intron 45.0%
TAAAGGCCCATGACCATTTG+GGG - chr3_1:91800217-91800236 Msa0387730:intron 45.0%
ATTTGGCCCCAAATGGTCAT+GGG + chr3_1:91800226-91800245 None:intergenic 45.0%
AATTTGGCCCCAAATGGTCA+TGG + chr3_1:91800227-91800246 None:intergenic 45.0%
CGTCATCACAAAAGGCTTGT+GGG + chr3_1:91800739-91800758 None:intergenic 45.0%
ACGTCATCACAAAAGGCTTG+TGG + chr3_1:91800740-91800759 None:intergenic 45.0%
GTAGCTGGACATTAATTGGC+AGG + chr3_1:91800783-91800802 None:intergenic 45.0%
GCCAATTAATGTCCAGCTAC+AGG - chr3_1:91800783-91800802 Msa0387730:intron 45.0%
ACATGTTCAGCTCATGTTGG+AGG + chr3_1:91800822-91800841 None:intergenic 45.0%
GTGACATGTTCAGCTCATGT+TGG + chr3_1:91800825-91800844 None:intergenic 45.0%
AATGTATGTAGGACAGGGAC+CGG - chr3_1:91801215-91801234 Msa0387730:CDS 45.0%
CGGAAATTAAGGATCTTCCC+TGG - chr3_1:91801235-91801254 Msa0387730:CDS 45.0%
! GGCATCACATAAGGTTCTAG+TGG + chr3_1:91801286-91801305 None:intergenic 45.0%
AACCTTATGTGATGCCTCCT+AGG - chr3_1:91801290-91801309 Msa0387730:intron 45.0%
!! ATAAAATAAAATAAAATTGA+AGG + chr3_1:91797788-91797807 None:intergenic 5.0%
!!! TTTATTTTATTTTTTTGAAT+AGG - chr3_1:91797798-91797817 Msa0387730:three_prime_UTR 5.0%
!!! TTAAAAATTTGTATTTTTTA+GGG + chr3_1:91800153-91800172 None:intergenic 5.0%
!!! TTTAAAAATTTGTATTTTTT+AGG + chr3_1:91800154-91800173 None:intergenic 5.0%
!! ATAAAATAAAATAAAATTGA+AGG + chr3_1:91797788-91797807 None:intergenic 5.0%
!!! TTTATTTTATTTTTTTGAAT+AGG - chr3_1:91797798-91797817 Msa0387730:three_prime_UTR 5.0%
!!! TTAAAAATTTGTATTTTTTA+GGG + chr3_1:91800153-91800172 None:intergenic 5.0%
!!! TTTAAAAATTTGTATTTTTT+AGG + chr3_1:91800154-91800173 None:intergenic 5.0%
!! TTAATCTTGATGGGCTCCGG+TGG - chr3_1:91798063-91798082 Msa0387730:CDS 50.0%
CATGGTCACATTCAGTCACC+TGG + chr3_1:91798109-91798128 None:intergenic 50.0%
GACCGTATCTGTGTCGGATT+TGG + chr3_1:91798383-91798402 None:intergenic 50.0%
GAGTAGATCAGATGGAAGGG+AGG - chr3_1:91798611-91798630 Msa0387730:intron 50.0%
GAAGGGAGGCAAATCACTAG+AGG - chr3_1:91798625-91798644 Msa0387730:intron 50.0%
GGAGGCAAATCACTAGAGGT+AGG - chr3_1:91798629-91798648 Msa0387730:intron 50.0%
TGTTCCTCATGCAGGTTCTC+GGG - chr3_1:91799253-91799272 Msa0387730:intron 50.0%
GCCAAGGATATTGCTGTGAC+TGG - chr3_1:91799372-91799391 Msa0387730:intron 50.0%
CCCAGTCACAGCAATATCCT+TGG + chr3_1:91799376-91799395 None:intergenic 50.0%
AGGATATTGCTGTGACTGGG+AGG - chr3_1:91799376-91799395 Msa0387730:intron 50.0%
GAACTTGGGGTAGGACCTAA+TGG - chr3_1:91800036-91800055 Msa0387730:CDS 50.0%
CAGCTACAGGAATGGAATCG+CGG - chr3_1:91800796-91800815 Msa0387730:intron 50.0%
AGGACAGGGACCGGAAATTA+AGG - chr3_1:91801224-91801243 Msa0387730:CDS 50.0%
TCTAGTGGCCGATCACCAAA+GGG + chr3_1:91801271-91801290 None:intergenic 50.0%
TTCTAGTGGCCGATCACCAA+AGG + chr3_1:91801272-91801291 None:intergenic 50.0%
!! GTCCTAGGAGGCATCACATA+AGG + chr3_1:91801295-91801314 None:intergenic 50.0%
ATCTCTCGTACTGTCCTAGG+AGG + chr3_1:91801307-91801326 None:intergenic 50.0%
CTCATCTCTCGTACTGTCCT+AGG + chr3_1:91801310-91801329 None:intergenic 50.0%
!! TTAATCTTGATGGGCTCCGG+TGG - chr3_1:91798063-91798082 Msa0387730:CDS 50.0%
CATGGTCACATTCAGTCACC+TGG + chr3_1:91798109-91798128 None:intergenic 50.0%
GACCGTATCTGTGTCGGATT+TGG + chr3_1:91798383-91798402 None:intergenic 50.0%
GAGTAGATCAGATGGAAGGG+AGG - chr3_1:91798611-91798630 Msa0387730:intron 50.0%
GAAGGGAGGCAAATCACTAG+AGG - chr3_1:91798625-91798644 Msa0387730:intron 50.0%
GGAGGCAAATCACTAGAGGT+AGG - chr3_1:91798629-91798648 Msa0387730:intron 50.0%
TGTTCCTCATGCAGGTTCTC+GGG - chr3_1:91799253-91799272 Msa0387730:intron 50.0%
GCCAAGGATATTGCTGTGAC+TGG - chr3_1:91799372-91799391 Msa0387730:intron 50.0%
CCCAGTCACAGCAATATCCT+TGG + chr3_1:91799376-91799395 None:intergenic 50.0%
AGGATATTGCTGTGACTGGG+AGG - chr3_1:91799376-91799395 Msa0387730:intron 50.0%
GAACTTGGGGTAGGACCTAA+TGG - chr3_1:91800036-91800055 Msa0387730:CDS 50.0%
CAGCTACAGGAATGGAATCG+CGG - chr3_1:91800796-91800815 Msa0387730:intron 50.0%
AGGACAGGGACCGGAAATTA+AGG - chr3_1:91801224-91801243 Msa0387730:CDS 50.0%
TCTAGTGGCCGATCACCAAA+GGG + chr3_1:91801271-91801290 None:intergenic 50.0%
TTCTAGTGGCCGATCACCAA+AGG + chr3_1:91801272-91801291 None:intergenic 50.0%
!! GTCCTAGGAGGCATCACATA+AGG + chr3_1:91801295-91801314 None:intergenic 50.0%
ATCTCTCGTACTGTCCTAGG+AGG + chr3_1:91801307-91801326 None:intergenic 50.0%
CTCATCTCTCGTACTGTCCT+AGG + chr3_1:91801310-91801329 None:intergenic 50.0%
! TGTTTTCAGAGAGCGGCAGC+TGG - chr3_1:91798029-91798048 Msa0387730:CDS 55.0%
!!! TGGCGGGTTTTCGATGCCAA+GGG - chr3_1:91798083-91798102 Msa0387730:intron 55.0%
ACATTCAGTCACCTGGCCCT+TGG + chr3_1:91798102-91798121 None:intergenic 55.0%
TGGGAGGAAGCTGACAGACA+AGG - chr3_1:91799392-91799411 Msa0387730:intron 55.0%
CGCGATTCCATTCCTGTAGC+TGG + chr3_1:91800798-91800817 None:intergenic 55.0%
!! CAAAGGGGTGCTCACTACCA+GGG + chr3_1:91801255-91801274 None:intergenic 55.0%
! GTGAGCACCCCTTTGGTGAT+CGG - chr3_1:91801260-91801279 Msa0387730:CDS 55.0%
CTAGTGGCCGATCACCAAAG+GGG + chr3_1:91801270-91801289 None:intergenic 55.0%
GAGAGATGAGACCACGAGCA+AGG - chr3_1:91801320-91801339 Msa0387730:intron 55.0%
ATCATTGCACGCCTTGCTCG+TGG + chr3_1:91801334-91801353 None:intergenic 55.0%
TGAGCAGCGACAGAATGCTG+AGG - chr3_1:91801393-91801412 Msa0387730:intron 55.0%
! TGTTTTCAGAGAGCGGCAGC+TGG - chr3_1:91798029-91798048 Msa0387730:CDS 55.0%
!!! TGGCGGGTTTTCGATGCCAA+GGG - chr3_1:91798083-91798102 Msa0387730:intron 55.0%
ACATTCAGTCACCTGGCCCT+TGG + chr3_1:91798102-91798121 None:intergenic 55.0%
TGGGAGGAAGCTGACAGACA+AGG - chr3_1:91799392-91799411 Msa0387730:intron 55.0%
CGCGATTCCATTCCTGTAGC+TGG + chr3_1:91800798-91800817 None:intergenic 55.0%
!! CAAAGGGGTGCTCACTACCA+GGG + chr3_1:91801255-91801274 None:intergenic 55.0%
! GTGAGCACCCCTTTGGTGAT+CGG - chr3_1:91801260-91801279 Msa0387730:CDS 55.0%
CTAGTGGCCGATCACCAAAG+GGG + chr3_1:91801270-91801289 None:intergenic 55.0%
GAGAGATGAGACCACGAGCA+AGG - chr3_1:91801320-91801339 Msa0387730:intron 55.0%
ATCATTGCACGCCTTGCTCG+TGG + chr3_1:91801334-91801353 None:intergenic 55.0%
TGAGCAGCGACAGAATGCTG+AGG - chr3_1:91801393-91801412 Msa0387730:intron 55.0%
!! ATCTTGATGGGCTCCGGTGG+CGG - chr3_1:91798066-91798085 Msa0387730:CDS 60.0%
! TGGCATCGAAAACCCGCCAC+CGG + chr3_1:91798082-91798101 None:intergenic 60.0%
!!! GTGGCGGGTTTTCGATGCCA+AGG - chr3_1:91798082-91798101 Msa0387730:intron 60.0%
! GGTTTTCGATGCCAAGGGCC+AGG - chr3_1:91798088-91798107 Msa0387730:intron 60.0%
TCCTCATGCAGGTTCTCGGG+AGG - chr3_1:91799256-91799275 Msa0387730:intron 60.0%
ACCTCCCGAGAACCTGCATG+AGG + chr3_1:91799260-91799279 None:intergenic 60.0%
!! CCAAAGGGGTGCTCACTACC+AGG + chr3_1:91801256-91801275 None:intergenic 60.0%
! CCTGGTAGTGAGCACCCCTT+TGG - chr3_1:91801253-91801272 Msa0387730:CDS 60.0%
!! ATCTTGATGGGCTCCGGTGG+CGG - chr3_1:91798066-91798085 Msa0387730:CDS 60.0%
! TGGCATCGAAAACCCGCCAC+CGG + chr3_1:91798082-91798101 None:intergenic 60.0%
!!! GTGGCGGGTTTTCGATGCCA+AGG - chr3_1:91798082-91798101 Msa0387730:intron 60.0%
! GGTTTTCGATGCCAAGGGCC+AGG - chr3_1:91798088-91798107 Msa0387730:intron 60.0%
TCCTCATGCAGGTTCTCGGG+AGG - chr3_1:91799256-91799275 Msa0387730:intron 60.0%
ACCTCCCGAGAACCTGCATG+AGG + chr3_1:91799260-91799279 None:intergenic 60.0%
!! CCAAAGGGGTGCTCACTACC+AGG + chr3_1:91801256-91801275 None:intergenic 60.0%
! CCTGGTAGTGAGCACCCCTT+TGG - chr3_1:91801253-91801272 Msa0387730:CDS 60.0%
!! TCTTGATGGGCTCCGGTGGC+GGG - chr3_1:91798067-91798086 Msa0387730:CDS 65.0%
!! TCTTGATGGGCTCCGGTGGC+GGG - chr3_1:91798067-91798086 Msa0387730:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 91797613 91801710 91797613 ID=Msa0387730;Name=Msa0387730
chr3_1 mRNA 91797613 91801710 91797613 ID=Msa0387730-mRNA-1;Parent=Msa0387730;Name=Msa0387730-mRNA-1;_AED=0.06;_eAED=0.06;_QI=112|0.8|0.66|1|0.6|0.66|6|263|187
chr3_1 exon 91797613 91798097 91797613 ID=Msa0387730-mRNA-1:exon:25699;Parent=Msa0387730-mRNA-1
chr3_1 exon 91799556 91799648 91799556 ID=Msa0387730-mRNA-1:exon:25698;Parent=Msa0387730-mRNA-1
chr3_1 exon 91799910 91800056 91799910 ID=Msa0387730-mRNA-1:exon:25697;Parent=Msa0387730-mRNA-1
chr3_1 exon 91801214 91801285 91801214 ID=Msa0387730-mRNA-1:exon:25696;Parent=Msa0387730-mRNA-1
chr3_1 exon 91801442 91801503 91801442 ID=Msa0387730-mRNA-1:exon:25695;Parent=Msa0387730-mRNA-1
chr3_1 exon 91801631 91801710 91801631 ID=Msa0387730-mRNA-1:exon:25694;Parent=Msa0387730-mRNA-1
chr3_1 five_prime_UTR 91801631 91801710 91801631 ID=Msa0387730-mRNA-1:five_prime_utr;Parent=Msa0387730-mRNA-1
chr3_1 five_prime_UTR 91801472 91801503 91801472 ID=Msa0387730-mRNA-1:five_prime_utr;Parent=Msa0387730-mRNA-1
chr3_1 CDS 91801442 91801471 91801442 ID=Msa0387730-mRNA-1:cds;Parent=Msa0387730-mRNA-1
chr3_1 CDS 91801214 91801285 91801214 ID=Msa0387730-mRNA-1:cds;Parent=Msa0387730-mRNA-1
chr3_1 CDS 91799910 91800056 91799910 ID=Msa0387730-mRNA-1:cds;Parent=Msa0387730-mRNA-1
chr3_1 CDS 91799556 91799648 91799556 ID=Msa0387730-mRNA-1:cds;Parent=Msa0387730-mRNA-1
chr3_1 CDS 91797876 91798097 91797876 ID=Msa0387730-mRNA-1:cds;Parent=Msa0387730-mRNA-1
chr3_1 three_prime_UTR 91797613 91797875 91797613 ID=Msa0387730-mRNA-1:three_prime_utr;Parent=Msa0387730-mRNA-1
Gene Sequence

>Msa0387730

ATGAAGATGGTAAACTCCTTCAACCTCAAGAGAGCGGCAGCTGGAATTAAACGCATTAATCTTGATGGGCTCCGGTGGCGGGTTTTCGATGCCAAGGGCCAGGTTCTCGGGAGGTTAGCATCTCAAATAGCTACTGTAGTTATGGGAAAGGATAAGCCAACTTATACTCCTAATCGTGACGATGGAGATATGTGCATTGTGCTTAATGCCAAGGATATTGCTGTGACTGGGAGGAAGCTGACAGACAAGCAAAGAACTCTGAAGGATCAGATGGCCAAAGACCCTACAGATGTTATTCGCAAAGCTATTCTGCGCATGATTCCTAAAAACAACTTACGTGATGACAGGGACCGGAAATTAAGGATCTTCCCTGGTAGTGAGCACCCCTTTGGTGATCGGCCACTAGAACCTTATGTGATGCCTCCTAGGACAGTACGAGAGATGAGACCACGAGCAAGGCGTGCAATGATTCGAGCACAGAAAAAGGCAGAGCAGCAACAAGAGAATGCTGAGCAGCGACAGAATGCTGAGGAAATGAAGAATAGCAAAAAGAGTGAAGCATAG

Protein sequence

>Msa0387730

MKMVNSFNLKRAAAGIKRINLDGLRWRVFDAKGQVLGRLASQIATVVMGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTDKQRTLKDQMAKDPTDVIRKAILRMIPKNNLRDDRDRKLRIFPGSEHPFGDRPLEPYVMPPRTVREMRPRARRAMIRAQKKAEQQQENAEQRQNAEEMKNSKKSEA*