Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51111.t1 | XP_003616741.1 | 96.4 | 366 | 13 | 0 | 1 | 366 | 1 | 366 | 6.60E-153 | 550.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51111.t1 | O22892 | 43.0 | 444 | 172 | 5 | 1 | 366 | 1 | 441 | 3.9e-69 | 263.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51111.t1 | G7K7B9 | 96.4 | 366 | 13 | 0 | 1 | 366 | 1 | 366 | 4.8e-153 | 550.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene51111 | 0.833074 | 6.57E-56 | -1.69E-46 |
| MS.gene049756 | MS.gene51111 | 0.804078 | 2.57E-49 | -1.69E-46 |
| MS.gene050069 | MS.gene51111 | 0.831749 | 1.40E-55 | -1.69E-46 |
| MS.gene050114 | MS.gene51111 | 0.838905 | 2.18E-57 | -1.69E-46 |
| MS.gene050277 | MS.gene51111 | 0.821508 | 3.89E-53 | -1.69E-46 |
| MS.gene050303 | MS.gene51111 | 0.836905 | 7.11E-57 | -1.69E-46 |
| MS.gene050317 | MS.gene51111 | 0.824289 | 8.75E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene51111 | 0.815406 | 9.40E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene51111 | 0.81073 | 9.97E-51 | -1.69E-46 |
| MS.gene051330 | MS.gene51111 | 0.826335 | 2.87E-54 | -1.69E-46 |
| MS.gene051451 | MS.gene51111 | 0.843331 | 1.50E-58 | -1.69E-46 |
| MS.gene051700 | MS.gene51111 | 0.815573 | 8.63E-52 | -1.69E-46 |
| MS.gene051746 | MS.gene51111 | 0.823312 | 1.48E-53 | -1.69E-46 |
| MS.gene051748 | MS.gene51111 | 0.83578 | 1.37E-56 | -1.69E-46 |
| MS.gene051756 | MS.gene51111 | 0.802008 | 6.88E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene51111 | 0.872393 | 3.29E-67 | -1.69E-46 |
| MS.gene051903 | MS.gene51111 | 0.861976 | 7.02E-64 | -1.69E-46 |
| MS.gene051975 | MS.gene51111 | 0.858707 | 6.85E-63 | -1.69E-46 |
| MS.gene052434 | MS.gene51111 | 0.840356 | 9.14E-58 | -1.69E-46 |
| MS.gene052947 | MS.gene51111 | 0.831121 | 2.00E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene51111 | 0.838085 | 3.55E-57 | -1.69E-46 |
| MS.gene053109 | MS.gene51111 | 0.822583 | 2.19E-53 | -1.69E-46 |
| MS.gene053298 | MS.gene51111 | 0.801111 | 1.05E-48 | -1.69E-46 |
| MS.gene053381 | MS.gene51111 | 0.833529 | 5.06E-56 | -1.69E-46 |
| MS.gene053895 | MS.gene51111 | -0.803683 | 3.10E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene51111 | 0.828932 | 6.83E-55 | -1.69E-46 |
| MS.gene05517 | MS.gene51111 | 0.816154 | 6.40E-52 | -1.69E-46 |
| MS.gene055311 | MS.gene51111 | 0.806064 | 9.86E-50 | -1.69E-46 |
| MS.gene055424 | MS.gene51111 | 0.820046 | 8.43E-53 | -1.69E-46 |
| MS.gene055441 | MS.gene51111 | 0.803608 | 3.21E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene51111 | 0.858528 | 7.75E-63 | -1.69E-46 |
| MS.gene055808 | MS.gene51111 | 0.804253 | 2.36E-49 | -1.69E-46 |
| MS.gene056091 | MS.gene51111 | 0.825307 | 5.03E-54 | -1.69E-46 |
| MS.gene056403 | MS.gene51111 | 0.89719 | 1.79E-76 | -1.69E-46 |
| MS.gene056605 | MS.gene51111 | 0.899743 | 1.46E-77 | -1.69E-46 |
| MS.gene056631 | MS.gene51111 | 0.849996 | 2.26E-60 | -1.69E-46 |
| MS.gene056787 | MS.gene51111 | 0.810592 | 1.07E-50 | -1.69E-46 |
| MS.gene05689 | MS.gene51111 | 0.836719 | 7.94E-57 | -1.69E-46 |
| MS.gene056986 | MS.gene51111 | 0.871761 | 5.34E-67 | -1.69E-46 |
| MS.gene057094 | MS.gene51111 | 0.878842 | 2.02E-69 | -1.69E-46 |
| MS.gene057140 | MS.gene51111 | 0.808889 | 2.48E-50 | -1.69E-46 |
| MS.gene057234 | MS.gene51111 | 0.813991 | 1.93E-51 | -1.69E-46 |
| MS.gene05781 | MS.gene51111 | 0.842608 | 2.33E-58 | -1.69E-46 |
| MS.gene057999 | MS.gene51111 | 0.831159 | 1.96E-55 | -1.69E-46 |
| MS.gene058084 | MS.gene51111 | 0.804803 | 1.81E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene51111 | 0.859786 | 3.25E-63 | -1.69E-46 |
| MS.gene058906 | MS.gene51111 | 0.813858 | 2.07E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene51111 | 0.814231 | 1.71E-51 | -1.69E-46 |
| MS.gene059249 | MS.gene51111 | 0.803738 | 3.02E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene51111 | 0.831319 | 1.79E-55 | -1.69E-46 |
| MS.gene059830 | MS.gene51111 | 0.847439 | 1.16E-59 | -1.69E-46 |
| MS.gene059901 | MS.gene51111 | -0.803167 | 3.97E-49 | -1.69E-46 |
| MS.gene059935 | MS.gene51111 | 0.803142 | 4.01E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene51111 | 0.864001 | 1.66E-64 | -1.69E-46 |
| MS.gene06010 | MS.gene51111 | 0.815081 | 1.11E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene51111 | 0.896424 | 3.74E-76 | -1.69E-46 |
| MS.gene060429 | MS.gene51111 | 0.844315 | 8.16E-59 | -1.69E-46 |
| MS.gene060586 | MS.gene51111 | 0.846685 | 1.86E-59 | -1.69E-46 |
| MS.gene060763 | MS.gene51111 | 0.876038 | 1.92E-68 | -1.69E-46 |
| MS.gene060830 | MS.gene51111 | 0.88441 | 1.96E-71 | -1.69E-46 |
| MS.gene060869 | MS.gene51111 | 0.801267 | 9.76E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51111.t1 | MTR_5g083780 | 98.907 | 366 | 4 | 0 | 1 | 366 | 1 | 366 | 0.0 | 730 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51111.t1 | AT2G40430 | 55.319 | 235 | 97 | 4 | 1 | 234 | 1 | 228 | 5.26e-70 | 227 |
| MS.gene51111.t1 | AT2G40430 | 53.704 | 162 | 74 | 1 | 199 | 360 | 275 | 435 | 1.18e-40 | 149 |
| MS.gene51111.t1 | AT2G40430 | 55.319 | 235 | 97 | 4 | 1 | 234 | 1 | 228 | 6.86e-70 | 227 |
| MS.gene51111.t1 | AT2G40430 | 52.047 | 171 | 81 | 1 | 199 | 369 | 275 | 444 | 3.24e-42 | 154 |
| MS.gene51111.t1 | AT2G40430 | 53.704 | 162 | 74 | 1 | 199 | 360 | 126 | 286 | 5.51e-42 | 149 |
| MS.gene51111.t1 | AT2G40430 | 73.563 | 87 | 23 | 0 | 1 | 87 | 1 | 87 | 1.18e-34 | 130 |
Find 73 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAAAAGATGCTCTTTC+TGG | 0.195441 | 5.1:-65980431 | MS.gene51111:CDS |
| ACAGTTAAAGGCACCGGTTC+AGG | 0.249592 | 5.1:+65978384 | None:intergenic |
| AACCTATTCCTCCTGGGTTT+TGG | 0.258900 | 5.1:+65976955 | None:intergenic |
| TTCATTGGCGACTAAACTTT+TGG | 0.280238 | 5.1:+65979103 | None:intergenic |
| TAAAGTCTACAGAAATGAAT+TGG | 0.292665 | 5.1:-65978409 | MS.gene51111:CDS |
| TCTCCAGCAGGAACAGTTAA+AGG | 0.308159 | 5.1:+65978372 | None:intergenic |
| TTATTAAGCGAAGAGATAAA+TGG | 0.314835 | 5.1:-65977174 | MS.gene51111:CDS |
| ATTCTTCTTCTTCTTTGATT+CGG | 0.360872 | 5.1:+65977601 | None:intergenic |
| ACAAGTCTACCTTAAGCTTT+CGG | 0.364930 | 5.1:+65977145 | None:intergenic |
| AGGCAACAAGAAAGTGAAAA+AGG | 0.370426 | 5.1:-65978758 | MS.gene51111:intron |
| AATGTGGAGCGACTTAAGTT+AGG | 0.374289 | 5.1:+65976328 | None:intergenic |
| TTTGATATGTGGGGTGATAA+AGG | 0.381349 | 5.1:-65978878 | MS.gene51111:intron |
| CTTAAGTCGCTCCACATTCA+TGG | 0.386619 | 5.1:-65976323 | MS.gene51111:CDS |
| ATTTCTCAAAAGAAATTGAT+AGG | 0.389918 | 5.1:-65977580 | MS.gene51111:intron |
| TCGCTTAATAAAACTTGAAC+AGG | 0.391740 | 5.1:+65977186 | None:intergenic |
| TGCTAAACAAGAGAGGTTAA+AGG | 0.397687 | 5.1:-65977390 | MS.gene51111:CDS |
| TTGAGTTGAATAAGAGAATT+CGG | 0.399925 | 5.1:-65977649 | MS.gene51111:CDS |
| TGGATCCATCCGAAAGCTTA+AGG | 0.404582 | 5.1:-65977154 | MS.gene51111:intron |
| TTCCAAAACCCAGGAGGAAT+AGG | 0.410228 | 5.1:-65976957 | MS.gene51111:intron |
| AAATGAATTGGGCCCTGAAC+CGG | 0.418925 | 5.1:-65978397 | MS.gene51111:CDS |
| ATTCTGACGTATTTGATATG+TGG | 0.431247 | 5.1:-65978889 | MS.gene51111:CDS |
| AAGGCACTGGCTTAACAAAC+TGG | 0.432795 | 5.1:+65979168 | None:intergenic |
| GGGTTGTTGCACACTTCTAA+AGG | 0.437307 | 5.1:-65977016 | MS.gene51111:CDS |
| CACATTCATGGCTCGATATG+TGG | 0.459538 | 5.1:-65976311 | MS.gene51111:CDS |
| CGCCAATGAAAATATTCATA+AGG | 0.466327 | 5.1:-65979090 | MS.gene51111:intron |
| GGAGGATCAACCTCGACAGC+TGG | 0.470903 | 5.1:+65978602 | None:intergenic |
| AAAGTCTACAGAAATGAATT+GGG | 0.481927 | 5.1:-65978408 | MS.gene51111:CDS |
| GGAAGAAATCGAAGAGTTCA+AGG | 0.484892 | 5.1:-65980517 | MS.gene51111:CDS |
| TCAGAAATAGCTTCTCCAGC+AGG | 0.486553 | 5.1:+65978360 | None:intergenic |
| AAGGCATGTCCTCCTCGCTT+AGG | 0.491146 | 5.1:-65977371 | MS.gene51111:CDS |
| TTAAACTAACCTATTCCTCC+TGG | 0.497216 | 5.1:+65976948 | None:intergenic |
| AATCGAAGAGTTCAAGGAAA+GGG | 0.500348 | 5.1:-65980511 | MS.gene51111:CDS |
| ATGTGGAGCGACTTAAGTTA+GGG | 0.501370 | 5.1:+65976329 | None:intergenic |
| TCCCACACATGAAAGTCATC+AGG | 0.503208 | 5.1:-65978564 | MS.gene51111:intron |
| CAGTTAAAGGCACCGGTTCA+GGG | 0.505603 | 5.1:+65978385 | None:intergenic |
| GTGCCTTTAACTGTTCCTGC+TGG | 0.514168 | 5.1:-65978375 | MS.gene51111:CDS |
| AATAAAACTTGAACAGGAGC+AGG | 0.514471 | 5.1:+65977192 | None:intergenic |
| TTCTGACGTATTTGATATGT+GGG | 0.515220 | 5.1:-65978888 | MS.gene51111:CDS |
| GGAAATTAAGCATGAAGATG+AGG | 0.531668 | 5.1:-65977444 | MS.gene51111:CDS |
| TAAACTAACCTATTCCTCCT+GGG | 0.538566 | 5.1:+65976949 | None:intergenic |
| TGTCATGCAGACGCAGATGA+AGG | 0.540396 | 5.1:-65978778 | MS.gene51111:intron |
| TGTTTCTTTAGAGTAGATGA+AGG | 0.544003 | 5.1:+65979149 | None:intergenic |
| TACTTGTGCTTTCCTAAGCG+AGG | 0.545713 | 5.1:+65977359 | None:intergenic |
| GTCTACCTTAAGCTTTCGGA+TGG | 0.547767 | 5.1:+65977149 | None:intergenic |
| TTTAGAGTAGATGAAGGCAC+TGG | 0.552068 | 5.1:+65979155 | None:intergenic |
| ACCTGATGACTTTCATGTGT+GGG | 0.552896 | 5.1:+65978563 | None:intergenic |
| TACATTAGCTACTGCTGTTG+CGG | 0.553793 | 5.1:-65978442 | MS.gene51111:CDS |
| GTATAAAAGCATAGAGAAGA+GGG | 0.558222 | 5.1:-65976989 | MS.gene51111:CDS |
| GCTGTCGAGGTTGATCCTCC+AGG | 0.559631 | 5.1:-65978599 | MS.gene51111:CDS |
| ACAAAAGATGCTCTTTCTGG+TGG | 0.562367 | 5.1:-65980428 | MS.gene51111:CDS |
| CAAGGAAAGGGAAGAAAGCA+TGG | 0.567630 | 5.1:-65980499 | MS.gene51111:CDS |
| AAATCGAAGAGTTCAAGGAA+AGG | 0.574179 | 5.1:-65980512 | MS.gene51111:CDS |
| GGTTGGTTGTTCCAAAACCC+AGG | 0.577115 | 5.1:-65976966 | MS.gene51111:CDS |
| TACTCATATTCCAGCTGTCG+AGG | 0.579607 | 5.1:-65978612 | MS.gene51111:CDS |
| TTTGATGTGGCTAGATCTTG+CGG | 0.583564 | 5.1:-65979255 | MS.gene51111:intron |
| GCAGGAACAGTTAAAGGCAC+CGG | 0.584872 | 5.1:+65978378 | None:intergenic |
| GTTGCACACTTCTAAAGGAT+CGG | 0.588324 | 5.1:-65977011 | MS.gene51111:CDS |
| GGTATAAAAGCATAGAGAAG+AGG | 0.597174 | 5.1:-65976990 | MS.gene51111:CDS |
| GAAAGTAATCACGAAGATGA+TGG | 0.598830 | 5.1:-65978150 | MS.gene51111:CDS |
| TCGACAGCTGGAATATGAGT+AGG | 0.600011 | 5.1:+65978614 | None:intergenic |
| TGTGGCAAGAAGACATGTGA+TGG | 0.601701 | 5.1:-65976293 | MS.gene51111:CDS |
| TATAAAAGCATAGAGAAGAG+GGG | 0.615122 | 5.1:-65976988 | MS.gene51111:CDS |
| TTAAGTTAGGGAAGAAAACA+AGG | 0.622310 | 5.1:+65976341 | None:intergenic |
| GTGGGATTAAATGAGCATCC+TGG | 0.637097 | 5.1:+65978581 | None:intergenic |
| TACCTGATGACTTTCATGTG+TGG | 0.645793 | 5.1:+65978562 | None:intergenic |
| TTGTGCTTTCCTAAGCGAGG+AGG | 0.655472 | 5.1:+65977362 | None:intergenic |
| CACATATCGAGCCATGAATG+TGG | 0.657958 | 5.1:+65976312 | None:intergenic |
| ATAAAAGCATAGAGAAGAGG+GGG | 0.668542 | 5.1:-65976987 | MS.gene51111:CDS |
| GACAAGTTGCTAAACAAGAG+AGG | 0.673783 | 5.1:-65977397 | MS.gene51111:CDS |
| GGATTAAATGAGCATCCTGG+AGG | 0.690842 | 5.1:+65978584 | None:intergenic |
| TGGTTGTTCCAAAACCCAGG+AGG | 0.713845 | 5.1:-65976963 | MS.gene51111:CDS |
| AAATACGTCAGAATCTAACA+CGG | 0.731068 | 5.1:+65978898 | None:intergenic |
| TCTGACGTATTTGATATGTG+GGG | 0.759234 | 5.1:-65978887 | MS.gene51111:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTAATATTAATT+TGG | - | chr5.1:65980052-65980071 | MS.gene51111:intron | 0.0% |
| !! | CCAAAATAAATAAATAAAAA+TGG | + | chr5.1:65976465-65976484 | None:intergenic | 10.0% |
| !! | TTAATTTATAATAACCAAAA+TGG | + | chr5.1:65977978-65977997 | None:intergenic | 10.0% |
| !! | TTTGGTTATTATAAATTAAT+GGG | - | chr5.1:65977979-65977998 | MS.gene51111:intron | 10.0% |
| !!! | AATAAAACAAATTTTAAAAG+AGG | + | chr5.1:65977853-65977872 | None:intergenic | 10.0% |
| !!! | AATTTATTTTAAATTTGATG+TGG | - | chr5.1:65977538-65977557 | MS.gene51111:intron | 10.0% |
| !!! | CCATTTTTATTTATTTATTT+TGG | - | chr5.1:65976462-65976481 | MS.gene51111:intron | 10.0% |
| !!! | GTGTATAAATTTTTATTTTA+TGG | - | chr5.1:65978895-65978914 | MS.gene51111:CDS | 10.0% |
| !!! | TATTTTATTTTTTCAAAACA+AGG | - | chr5.1:65977054-65977073 | MS.gene51111:intron | 10.0% |
| !!! | TTTTGGTTATTATAAATTAA+TGG | - | chr5.1:65977978-65977997 | MS.gene51111:intron | 10.0% |
| !! | TTAAAATAAATTCAAATCCA+AGG | + | chr5.1:65977530-65977549 | None:intergenic | 15.0% |
| !! | TTACTTACAAATATATTAAG+TGG | + | chr5.1:65979023-65979042 | None:intergenic | 15.0% |
| !! | TTTCTTTAATAATCTATATC+AGG | - | chr5.1:65977879-65977898 | MS.gene51111:intron | 15.0% |
| !!! | AAATTAGTCTAAAAAAAAGT+AGG | + | chr5.1:65979743-65979762 | None:intergenic | 15.0% |
| !!! | AATTAGTCTAAAAAAAAGTA+GGG | + | chr5.1:65979742-65979761 | None:intergenic | 15.0% |
| !!! | GTTAAAATTCATTTTCTTTT+AGG | - | chr5.1:65977094-65977113 | MS.gene51111:intron | 15.0% |
| !!! | TTATTTTGTTTAGAGAAAAA+TGG | - | chr5.1:65979920-65979939 | MS.gene51111:intron | 15.0% |
| !! | AAATATGGAAACAAATTCAT+AGG | + | chr5.1:65978522-65978541 | None:intergenic | 20.0% |
| !! | ATTATGATTATGCATTATAC+AGG | - | chr5.1:65980430-65980449 | MS.gene51111:CDS | 20.0% |
| !! | ATTCAACGAAATATACAATA+TGG | + | chr5.1:65980378-65980397 | None:intergenic | 20.0% |
| !! | ATTTCTCAAAAGAAATTGAT+AGG | - | chr5.1:65979226-65979245 | MS.gene51111:CDS | 20.0% |
| !! | CTAAATAATAATATGCTTAG+TGG | - | chr5.1:65977766-65977785 | MS.gene51111:intron | 20.0% |
| !! | GAAAACACATCAATTATAAT+AGG | + | chr5.1:65977346-65977365 | None:intergenic | 20.0% |
| !! | TTTAATAATCTATATCAGGA+GGG | - | chr5.1:65977883-65977902 | MS.gene51111:intron | 20.0% |
| !!! | AGTGGTAATTTTAAAAAACT+TGG | - | chr5.1:65980098-65980117 | MS.gene51111:intron | 20.0% |
| !!! | CATAAGTTGTTTTAGTTTTA+GGG | - | chr5.1:65976876-65976895 | MS.gene51111:intron | 20.0% |
| !!! | GTAACACAATCTTTTTTTTT+AGG | - | chr5.1:65977141-65977160 | MS.gene51111:intron | 20.0% |
| !!! | TCATAAGTTGTTTTAGTTTT+AGG | - | chr5.1:65976875-65976894 | MS.gene51111:intron | 20.0% |
| !!! | TTAAATACTTTCTTTTTTGC+CGG | - | chr5.1:65978744-65978763 | MS.gene51111:intron | 20.0% |
| !!! | TTTATTTTTTCAAAACAAGG+AGG | - | chr5.1:65977057-65977076 | MS.gene51111:intron | 20.0% |
| !!! | TTTTTAGTTTTAGGTTTGTT+TGG | - | chr5.1:65976556-65976575 | MS.gene51111:intron | 20.0% |
| ! | AAACGTAATTGTTGTAGAAA+TGG | + | chr5.1:65979557-65979576 | None:intergenic | 25.0% |
| ! | AAAGTCTACAGAAATGAATT+GGG | - | chr5.1:65978398-65978417 | MS.gene51111:CDS | 25.0% |
| ! | AACGAAATATACAATATGGA+AGG | + | chr5.1:65980374-65980393 | None:intergenic | 25.0% |
| ! | AAGAACTTTATTGTTTAACC+AGG | - | chr5.1:65978340-65978359 | MS.gene51111:intron | 25.0% |
| ! | ACAAATCAAGTGAAGAAATA+TGG | + | chr5.1:65980290-65980309 | None:intergenic | 25.0% |
| ! | AGCTTATGAAAACAACTTAT+AGG | - | chr5.1:65977211-65977230 | MS.gene51111:intron | 25.0% |
| ! | ATCAATGAAAAAGTGAATTC+TGG | + | chr5.1:65977507-65977526 | None:intergenic | 25.0% |
| ! | ATCAGATATTTAGACATAAC+TGG | + | chr5.1:65979076-65979095 | None:intergenic | 25.0% |
| ! | ATTAAGCTGTTTATTCAAAC+AGG | - | chr5.1:65977287-65977306 | MS.gene51111:intron | 25.0% |
| ! | ATTAATGGGATGTTAACATT+AGG | - | chr5.1:65977993-65978012 | MS.gene51111:intron | 25.0% |
| ! | ATTATATGCTTGCAATTAGT+TGG | - | chr5.1:65979954-65979973 | MS.gene51111:intron | 25.0% |
| ! | ATTCTTCTTCTTCTTTGATT+CGG | + | chr5.1:65979208-65979227 | None:intergenic | 25.0% |
| ! | CATTAATACAAGTACGATAA+GGG | + | chr5.1:65979490-65979509 | None:intergenic | 25.0% |
| ! | CTCTATAAAGAAAAGCTATT+AGG | - | chr5.1:65977012-65977031 | MS.gene51111:CDS | 25.0% |
| ! | CTTATCGTACTTGTATTAAT+GGG | - | chr5.1:65979489-65979508 | MS.gene51111:intron | 25.0% |
| ! | CTTTAATAATCTATATCAGG+AGG | - | chr5.1:65977882-65977901 | MS.gene51111:intron | 25.0% |
| ! | GCTTTCAAAAAAAAGAATAC+CGG | + | chr5.1:65978932-65978951 | None:intergenic | 25.0% |
| ! | GTACAAGTTTATGTAATTCA+TGG | + | chr5.1:65977368-65977387 | None:intergenic | 25.0% |
| ! | TAAAGTCTACAGAAATGAAT+TGG | - | chr5.1:65978397-65978416 | MS.gene51111:CDS | 25.0% |
| ! | TATGTTGGTGTACATAATTA+GGG | - | chr5.1:65979770-65979789 | MS.gene51111:intron | 25.0% |
| ! | TCAGATATTTAGACATAACT+GGG | + | chr5.1:65979075-65979094 | None:intergenic | 25.0% |
| ! | TGTATTGTTTGAATCACTAT+TGG | - | chr5.1:65979101-65979120 | MS.gene51111:CDS | 25.0% |
| ! | TTAAGCTGTTTATTCAAACA+GGG | - | chr5.1:65977288-65977307 | MS.gene51111:intron | 25.0% |
| ! | TTATGTTGGTGTACATAATT+AGG | - | chr5.1:65979769-65979788 | MS.gene51111:intron | 25.0% |
| ! | TTATTAAGCGAAGAGATAAA+TGG | - | chr5.1:65979632-65979651 | MS.gene51111:intron | 25.0% |
| !! | CTTAATTTCATTTTGAACAC+TGG | - | chr5.1:65978988-65979007 | MS.gene51111:intron | 25.0% |
| !! | GACCTTATGAATATTTTCAT+TGG | + | chr5.1:65977721-65977740 | None:intergenic | 25.0% |
| !! | GCAATATGATATTGTGTTTT+TGG | + | chr5.1:65980252-65980271 | None:intergenic | 25.0% |
| !! | TGTCTTTGATTTAGAATTTG+AGG | - | chr5.1:65980312-65980331 | MS.gene51111:intron | 25.0% |
| !!! | AAAGCATTTAGTATCCATTT+TGG | - | chr5.1:65977961-65977980 | MS.gene51111:intron | 25.0% |
| !!! | AGTCACTTTCTTTGTTTTAA+CGG | + | chr5.1:65979133-65979152 | None:intergenic | 25.0% |
| !!! | CATTTTTGAAGTGTTTGTTT+TGG | - | chr5.1:65976963-65976982 | MS.gene51111:CDS | 25.0% |
| !!! | TGGAAAGTGTTTTTAGTTTT+AGG | - | chr5.1:65976547-65976566 | MS.gene51111:intron | 25.0% |
| !!! | TGTTATTTTTATGACCTGAT+TGG | + | chr5.1:65978779-65978798 | None:intergenic | 25.0% |
| !!! | TTGAGTTGAATAAGAGAATT+CGG | - | chr5.1:65979157-65979176 | MS.gene51111:CDS | 25.0% |
| AAATACGTCAGAATCTAACA+CGG | + | chr5.1:65977911-65977930 | None:intergenic | 30.0% | |
| AACTAATGGGAATAAGATCA+AGG | + | chr5.1:65977182-65977201 | None:intergenic | 30.0% | |
| AAGCTATCTTAGAGAACTAA+TGG | + | chr5.1:65977196-65977215 | None:intergenic | 30.0% | |
| AATGTGCAGCAACAATTAAA+TGG | + | chr5.1:65978116-65978135 | None:intergenic | 30.0% | |
| ACATAAACTTGTACGAGAAA+TGG | - | chr5.1:65977374-65977393 | MS.gene51111:CDS | 30.0% | |
| ACCAATTCCATTATTGTAAC+AGG | - | chr5.1:65979585-65979604 | MS.gene51111:intron | 30.0% | |
| ACTAATGGGAATAAGATCAA+GGG | + | chr5.1:65977181-65977200 | None:intergenic | 30.0% | |
| AGCTATCTTAGAGAACTAAT+GGG | + | chr5.1:65977195-65977214 | None:intergenic | 30.0% | |
| ATTATGTACACCAACATAAG+TGG | + | chr5.1:65979768-65979787 | None:intergenic | 30.0% | |
| ATTCTGACGTATTTGATATG+TGG | - | chr5.1:65977917-65977936 | MS.gene51111:intron | 30.0% | |
| CACTTCAAAAATGACAAAAG+TGG | + | chr5.1:65976956-65976975 | None:intergenic | 30.0% | |
| CAGTTACATAAGCTTGTATA+TGG | - | chr5.1:65976527-65976546 | MS.gene51111:intron | 30.0% | |
| CCATTAATACAAGTACGATA+AGG | + | chr5.1:65979491-65979510 | None:intergenic | 30.0% | |
| CCTTATCGTACTTGTATTAA+TGG | - | chr5.1:65979488-65979507 | MS.gene51111:intron | 30.0% | |
| CGCCAATGAAAATATTCATA+AGG | - | chr5.1:65977716-65977735 | MS.gene51111:intron | 30.0% | |
| GGTTGAAATTGATGTTTAAG+AGG | - | chr5.1:65980073-65980092 | MS.gene51111:intron | 30.0% | |
| GGTTTAAATTGAGTTTGAAG+TGG | - | chr5.1:65980119-65980138 | MS.gene51111:intron | 30.0% | |
| GTTTGCGATGAAAAGAAAAA+AGG | + | chr5.1:65977831-65977850 | None:intergenic | 30.0% | |
| TAAAAATGGGTACATACCTT+TGG | + | chr5.1:65976451-65976470 | None:intergenic | 30.0% | |
| TCGCTTAATAAAACTTGAAC+AGG | + | chr5.1:65979623-65979642 | None:intergenic | 30.0% | |
| TCTAATAAGCCAATCCAAAT+AGG | + | chr5.1:65976784-65976803 | None:intergenic | 30.0% | |
| TTAAATGGAAGAAGAAACAC+TGG | + | chr5.1:65978101-65978120 | None:intergenic | 30.0% | |
| TTAAGTTAGGGAAGAAAACA+AGG | + | chr5.1:65980468-65980487 | None:intergenic | 30.0% | |
| TTATGTACACCAACATAAGT+GGG | + | chr5.1:65979767-65979786 | None:intergenic | 30.0% | |
| TTCTGACGTATTTGATATGT+GGG | - | chr5.1:65977918-65977937 | MS.gene51111:intron | 30.0% | |
| ! | AAGGCTAAGTTAAGCTTTTT+AGG | - | chr5.1:65978873-65978892 | MS.gene51111:intron | 30.0% |
| ! | ACCTGTTACAATAATGGAAT+TGG | + | chr5.1:65979589-65979608 | None:intergenic | 30.0% |
| ! | ACTAATTTTCCCACTTATGT+TGG | - | chr5.1:65979755-65979774 | MS.gene51111:intron | 30.0% |
| ! | ATTTGGATTTTGGACAGAAT+GGG | - | chr5.1:65977796-65977815 | MS.gene51111:intron | 30.0% |
| ! | GTATAAAAGCATAGAGAAGA+GGG | - | chr5.1:65979817-65979836 | MS.gene51111:intron | 30.0% |
| ! | TATAAAAGCATAGAGAAGAG+GGG | - | chr5.1:65979818-65979837 | MS.gene51111:intron | 30.0% |
| ! | TATTTGGATTTTGGACAGAA+TGG | - | chr5.1:65977795-65977814 | MS.gene51111:intron | 30.0% |
| ! | TGGCAAACATATTTGGATTT+TGG | - | chr5.1:65977786-65977805 | MS.gene51111:intron | 30.0% |
| ! | TTGTTGTTATCATCTCAGTT+TGG | - | chr5.1:65979894-65979913 | MS.gene51111:intron | 30.0% |
| !! | AGATGATTTTTAAGCATCTC+TGG | - | chr5.1:65979306-65979325 | MS.gene51111:intron | 30.0% |
| !! | TGTTTCTTTAGAGTAGATGA+AGG | + | chr5.1:65977660-65977679 | None:intergenic | 30.0% |
| !! | TTATCTGCATTTCTAGTATG+TGG | - | chr5.1:65977436-65977455 | MS.gene51111:CDS | 30.0% |
| !! | TTTTTCGAAGACAAATCCAA+AGG | - | chr5.1:65976432-65976451 | MS.gene51111:intron | 30.0% |
| !!! | ATATTGTGTTTTTGGATTCG+TGG | + | chr5.1:65980244-65980263 | None:intergenic | 30.0% |
| !!! | ATTCAGTAACCTTGCTTTTT+TGG | - | chr5.1:65978593-65978612 | MS.gene51111:CDS | 30.0% |
| !!! | GTCACTTTCTTTGTTTTAAC+GGG | + | chr5.1:65979132-65979151 | None:intergenic | 30.0% |
| !!! | TATTGTGTTTTTGGATTCGT+GGG | + | chr5.1:65980243-65980262 | None:intergenic | 30.0% |
| !!! | TTAAGCATCTCTGGTTTTTT+TGG | - | chr5.1:65979315-65979334 | MS.gene51111:intron | 30.0% |
| !!! | TTCACTTTTTCATTGATCCT+TGG | - | chr5.1:65977510-65977529 | MS.gene51111:intron | 30.0% |
| !!! | TTTATTTTATGGAGACCATG+TGG | - | chr5.1:65978906-65978925 | MS.gene51111:CDS | 30.0% |
| AAAAATCGAGAAGACATCTG+AGG | - | chr5.1:65979385-65979404 | MS.gene51111:intron | 35.0% | |
| AAATCGAAGAGTTCAAGGAA+AGG | - | chr5.1:65976294-65976313 | MS.gene51111:CDS | 35.0% | |
| AAGTACCTGTGAGATTGATT+GGG | - | chr5.1:65976820-65976839 | MS.gene51111:intron | 35.0% | |
| AATAAAACTTGAACAGGAGC+AGG | + | chr5.1:65979617-65979636 | None:intergenic | 35.0% | |
| AATCGAAGAGTTCAAGGAAA+GGG | - | chr5.1:65976295-65976314 | MS.gene51111:CDS | 35.0% | |
| ACAAGTCTACCTTAAGCTTT+CGG | + | chr5.1:65979664-65979683 | None:intergenic | 35.0% | |
| ACTTACACATAGAGCCTATT+TGG | - | chr5.1:65976767-65976786 | MS.gene51111:intron | 35.0% | |
| AGGCAACAAGAAAGTGAAAA+AGG | - | chr5.1:65978048-65978067 | MS.gene51111:intron | 35.0% | |
| ATCCAAACTGTCTCATTATG+TGG | - | chr5.1:65977313-65977332 | MS.gene51111:intron | 35.0% | |
| ATTGATGTTTAAGAGGTCAG+TGG | - | chr5.1:65980080-65980099 | MS.gene51111:intron | 35.0% | |
| CAGCATATCAAAAATTGCTG+AGG | - | chr5.1:65979341-65979360 | MS.gene51111:intron | 35.0% | |
| CCACATCAAGAAAATACATC+TGG | + | chr5.1:65978619-65978638 | None:intergenic | 35.0% | |
| GAAAGTAATCACGAAGATGA+TGG | - | chr5.1:65978656-65978675 | MS.gene51111:intron | 35.0% | |
| GCTGAAACCTGTTACAATAA+TGG | + | chr5.1:65979595-65979614 | None:intergenic | 35.0% | |
| GGAAATTAAGCATGAAGATG+AGG | - | chr5.1:65979362-65979381 | MS.gene51111:intron | 35.0% | |
| TAAACTAACCTATTCCTCCT+GGG | + | chr5.1:65979860-65979879 | None:intergenic | 35.0% | |
| TAAAGAAACACGCGAAAAAC+CGG | - | chr5.1:65977670-65977689 | MS.gene51111:CDS | 35.0% | |
| TAAGTACCTGTGAGATTGAT+TGG | - | chr5.1:65976819-65976838 | MS.gene51111:intron | 35.0% | |
| TACCACATAATGAGACAGTT+TGG | + | chr5.1:65977318-65977337 | None:intergenic | 35.0% | |
| TATCGAGAGCTTCGTAAATA+TGG | + | chr5.1:65978537-65978556 | None:intergenic | 35.0% | |
| TCAAAGATTTGCCTTGATGT+GGG | + | chr5.1:65980198-65980217 | None:intergenic | 35.0% | |
| TCAACAAAAGATGCTCTTTC+TGG | - | chr5.1:65976375-65976394 | MS.gene51111:intron | 35.0% | |
| TCTGACGTATTTGATATGTG+GGG | - | chr5.1:65977919-65977938 | MS.gene51111:intron | 35.0% | |
| TGCTAAACAAGAGAGGTTAA+AGG | - | chr5.1:65979416-65979435 | MS.gene51111:intron | 35.0% | |
| TGCTTAGTGGCAAACATATT+TGG | - | chr5.1:65977779-65977798 | MS.gene51111:intron | 35.0% | |
| TGTTTGAATCACTATTGGAC+AGG | - | chr5.1:65979106-65979125 | MS.gene51111:CDS | 35.0% | |
| TTAAACTAACCTATTCCTCC+TGG | + | chr5.1:65979861-65979880 | None:intergenic | 35.0% | |
| TTATACATGAAAGCTTGAGC+AGG | + | chr5.1:65978814-65978833 | None:intergenic | 35.0% | |
| TTCAAAGATTTGCCTTGATG+TGG | + | chr5.1:65980199-65980218 | None:intergenic | 35.0% | |
| TTCGAAAAAGAGAGAATCAC+TGG | + | chr5.1:65976421-65976440 | None:intergenic | 35.0% | |
| TTTGATATGTGGGGTGATAA+AGG | - | chr5.1:65977928-65977947 | MS.gene51111:intron | 35.0% | |
| ! | ATAAAAGCATAGAGAAGAGG+GGG | - | chr5.1:65979819-65979838 | MS.gene51111:intron | 35.0% |
| ! | CCAGATGTATTTTCTTGATG+TGG | - | chr5.1:65978616-65978635 | MS.gene51111:CDS | 35.0% |
| ! | GAAAGTCATCAGGTAGTTTT+TGG | - | chr5.1:65978252-65978271 | MS.gene51111:intron | 35.0% |
| ! | GGTATAAAAGCATAGAGAAG+AGG | - | chr5.1:65979816-65979835 | MS.gene51111:intron | 35.0% |
| ! | TTCATTGGCGACTAAACTTT+TGG | + | chr5.1:65977706-65977725 | None:intergenic | 35.0% |
| ! | TTTGGATTTTGGACAGAATG+GGG | - | chr5.1:65977797-65977816 | MS.gene51111:intron | 35.0% |
| !! | ACCTGATTGGTAATGTAAAC+CGG | + | chr5.1:65978766-65978785 | None:intergenic | 35.0% |
| !! | AGGATAGTACATTTTTGAGC+AGG | - | chr5.1:65980332-65980351 | MS.gene51111:intron | 35.0% |
| !! | CTAGTATGTGGTTGATTTGT+TGG | - | chr5.1:65977448-65977467 | MS.gene51111:CDS | 35.0% |
| !! | TGCATGTTGATAGCTAATGA+AGG | - | chr5.1:65978854-65978873 | MS.gene51111:intron | 35.0% |
| !! | TTGGTTGTAGAGTACTGTAT+TGG | - | chr5.1:65977467-65977486 | MS.gene51111:intron | 35.0% |
| AAAAAAGAATACCGGCCACA+TGG | + | chr5.1:65978924-65978943 | None:intergenic | 40.0% | |
| AATGTGGAGCGACTTAAGTT+AGG | + | chr5.1:65980481-65980500 | None:intergenic | 40.0% | |
| ACAAAAGATGCTCTTTCTGG+TGG | - | chr5.1:65976378-65976397 | MS.gene51111:intron | 40.0% | |
| ACCTGATGACTTTCATGTGT+GGG | + | chr5.1:65978246-65978265 | None:intergenic | 40.0% | |
| AGCAAGGTTACTGAATTAGC+AGG | + | chr5.1:65978589-65978608 | None:intergenic | 40.0% | |
| AGGTACACGTTATTGCATAG+CGG | - | chr5.1:65978068-65978087 | MS.gene51111:intron | 40.0% | |
| ATGTGGAGCGACTTAAGTTA+GGG | + | chr5.1:65980480-65980499 | None:intergenic | 40.0% | |
| ATTCTCCCAATCAATCTCAC+AGG | + | chr5.1:65976828-65976847 | None:intergenic | 40.0% | |
| CACATAGAGCCTATTTGGAT+TGG | - | chr5.1:65976772-65976791 | MS.gene51111:intron | 40.0% | |
| GACAAGTTGCTAAACAAGAG+AGG | - | chr5.1:65979409-65979428 | MS.gene51111:intron | 40.0% | |
| GGAAGAAATCGAAGAGTTCA+AGG | - | chr5.1:65976289-65976308 | MS.gene51111:CDS | 40.0% | |
| GTAAAACGAAACCCACATCA+AGG | - | chr5.1:65980184-65980203 | MS.gene51111:intron | 40.0% | |
| TACATCTGGCCAAAAAAGCA+AGG | + | chr5.1:65978605-65978624 | None:intergenic | 40.0% | |
| TACATTAGCTACTGCTGTTG+CGG | - | chr5.1:65978364-65978383 | MS.gene51111:CDS | 40.0% | |
| TACCTGATGACTTTCATGTG+TGG | + | chr5.1:65978247-65978266 | None:intergenic | 40.0% | |
| TTTAGTAGAGAGAGAGAGAG+AGG | + | chr5.1:65979281-65979300 | None:intergenic | 40.0% | |
| TTTGATGTGGCTAGATCTTG+CGG | - | chr5.1:65977551-65977570 | MS.gene51111:intron | 40.0% | |
| ! | AACTTTTGGACACCACTTTC+CGG | + | chr5.1:65977692-65977711 | None:intergenic | 40.0% |
| ! | GTTGCACACTTCTAAAGGAT+CGG | - | chr5.1:65979795-65979814 | MS.gene51111:intron | 40.0% |
| ! | TTGGATTTTGGACAGAATGG+GGG | - | chr5.1:65977798-65977817 | MS.gene51111:intron | 40.0% |
| ! | TTTAGAGTAGATGAAGGCAC+TGG | + | chr5.1:65977654-65977673 | None:intergenic | 40.0% |
| !!! | GTTTACCTGGTGTTTTTTCG+TGG | - | chr5.1:65979992-65980011 | MS.gene51111:intron | 40.0% |
| AAATGAATTGGGCCCTGAAC+CGG | - | chr5.1:65978409-65978428 | MS.gene51111:CDS | 45.0% | |
| AACAACATCGCTAACAGCAG+AGG | + | chr5.1:65978292-65978311 | None:intergenic | 45.0% | |
| AAGCTTGAGCAGGAAGGAAA+TGG | + | chr5.1:65978804-65978823 | None:intergenic | 45.0% | |
| ACATGAAAGCTTGAGCAGGA+AGG | + | chr5.1:65978810-65978829 | None:intergenic | 45.0% | |
| ATGTGCCACGAAAAAACACC+AGG | + | chr5.1:65980000-65980019 | None:intergenic | 45.0% | |
| CAAGGAAAGGGAAGAAAGCA+TGG | - | chr5.1:65976307-65976326 | MS.gene51111:CDS | 45.0% | |
| CACATATCGAGCCATGAATG+TGG | + | chr5.1:65980497-65980516 | None:intergenic | 45.0% | |
| CACATTCATGGCTCGATATG+TGG | - | chr5.1:65980495-65980514 | MS.gene51111:CDS | 45.0% | |
| CAGCAGTAGCTAATGTATCC+TGG | + | chr5.1:65978361-65978380 | None:intergenic | 45.0% | |
| CGTCTTCTGCTTAGTTTACC+TGG | - | chr5.1:65979979-65979998 | MS.gene51111:intron | 45.0% | |
| CTTAAGTCGCTCCACATTCA+TGG | - | chr5.1:65980483-65980502 | MS.gene51111:CDS | 45.0% | |
| GGATTAAATGAGCATCCTGG+AGG | + | chr5.1:65978225-65978244 | None:intergenic | 45.0% | |
| GGGTTGTTGCACACTTCTAA+AGG | - | chr5.1:65979790-65979809 | MS.gene51111:intron | 45.0% | |
| GTCTACCTTAAGCTTTCGGA+TGG | + | chr5.1:65979660-65979679 | None:intergenic | 45.0% | |
| GTGGGATTAAATGAGCATCC+TGG | + | chr5.1:65978228-65978247 | None:intergenic | 45.0% | |
| TACTCATATTCCAGCTGTCG+AGG | - | chr5.1:65978194-65978213 | MS.gene51111:intron | 45.0% | |
| TACTTGTGCTTTCCTAAGCG+AGG | + | chr5.1:65979450-65979469 | None:intergenic | 45.0% | |
| TCAGAAATAGCTTCTCCAGC+AGG | + | chr5.1:65978449-65978468 | None:intergenic | 45.0% | |
| TCCCACACATGAAAGTCATC+AGG | - | chr5.1:65978242-65978261 | MS.gene51111:intron | 45.0% | |
| TCGACAGCTGGAATATGAGT+AGG | + | chr5.1:65978195-65978214 | None:intergenic | 45.0% | |
| TCTCCAGCAGGAACAGTTAA+AGG | + | chr5.1:65978437-65978456 | None:intergenic | 45.0% | |
| TGGATCCATCCGAAAGCTTA+AGG | - | chr5.1:65979652-65979671 | MS.gene51111:intron | 45.0% | |
| TGTGGCAAGAAGACATGTGA+TGG | - | chr5.1:65980513-65980532 | MS.gene51111:CDS | 45.0% | |
| TTCCAAAACCCAGGAGGAAT+AGG | - | chr5.1:65979849-65979868 | MS.gene51111:intron | 45.0% | |
| ! | AACCTATTCCTCCTGGGTTT+TGG | + | chr5.1:65979854-65979873 | None:intergenic | 45.0% |
| ! | GCCGGTTTACATTACCAATC+AGG | - | chr5.1:65978762-65978781 | MS.gene51111:CDS | 45.0% |
| ! | TTTTATGGAGACCATGTGGC+CGG | - | chr5.1:65978910-65978929 | MS.gene51111:intron | 45.0% |
| !! | AAGGCACTGGCTTAACAAAC+TGG | + | chr5.1:65977641-65977660 | None:intergenic | 45.0% |
| !!! | TGTGTTTTTGGATTCGTGGG+AGG | + | chr5.1:65980240-65980259 | None:intergenic | 45.0% |
| !! | CAAAATAAATAAATAAAAAT+GGG | + | chr5.1:65976464-65976483 | None:intergenic | 5.0% |
| AAGCATAGAGAAGAGGGGGT+TGG | - | chr5.1:65979823-65979842 | MS.gene51111:intron | 50.0% | |
| ACACGCGAAAAACCGGAAAG+TGG | - | chr5.1:65977677-65977696 | MS.gene51111:CDS | 50.0% | |
| AGAGAGAGAGAGAGAGGTGA+GGG | + | chr5.1:65979275-65979294 | None:intergenic | 50.0% | |
| GGTGAGGGAGGATGAGAAAA+TGG | + | chr5.1:65979260-65979279 | None:intergenic | 50.0% | |
| GTGCCTTTAACTGTTCCTGC+TGG | - | chr5.1:65978431-65978450 | MS.gene51111:CDS | 50.0% | |
| TAGAGAGAGAGAGAGAGGTG+AGG | + | chr5.1:65979276-65979295 | None:intergenic | 50.0% | |
| TGGTTGTTCCAAAACCCAGG+AGG | - | chr5.1:65979843-65979862 | MS.gene51111:intron | 50.0% | |
| TGTCATGCAGACGCAGATGA+AGG | - | chr5.1:65978028-65978047 | MS.gene51111:intron | 50.0% | |
| TTGTGCTTTCCTAAGCGAGG+AGG | + | chr5.1:65979447-65979466 | None:intergenic | 50.0% | |
| ! | GCAGGAACAGTTAAAGGCAC+CGG | + | chr5.1:65978431-65978450 | None:intergenic | 50.0% |
| ! | GGTTGGTTGTTCCAAAACCC+AGG | - | chr5.1:65979840-65979859 | MS.gene51111:intron | 50.0% |
| !! | ACAGTTAAAGGCACCGGTTC+AGG | + | chr5.1:65978425-65978444 | None:intergenic | 50.0% |
| !! | CAGTTAAAGGCACCGGTTCA+GGG | + | chr5.1:65978424-65978443 | None:intergenic | 50.0% |
| AAGGCATGTCCTCCTCGCTT+AGG | - | chr5.1:65979435-65979454 | MS.gene51111:intron | 55.0% | |
| GAGAGAGAGAGAGGTGAGGG+AGG | + | chr5.1:65979272-65979291 | None:intergenic | 60.0% | |
| GGAGGATCAACCTCGACAGC+TGG | + | chr5.1:65978207-65978226 | None:intergenic | 60.0% | |
| ! | GCTGTCGAGGTTGATCCTCC+AGG | - | chr5.1:65978207-65978226 | MS.gene51111:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 65976285 | 65980543 | 65976285 | ID=MS.gene51111 |
| chr5.1 | mRNA | 65976285 | 65980543 | 65976285 | ID=MS.gene51111.t1;Parent=MS.gene51111 |
| chr5.1 | exon | 65980375 | 65980543 | 65980375 | ID=MS.gene51111.t1.exon1;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65980375 | 65980543 | 65980375 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65979091 | 65979263 | 65979091 | ID=MS.gene51111.t1.exon2;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65979091 | 65979263 | 65979091 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65978879 | 65978927 | 65978879 | ID=MS.gene51111.t1.exon3;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65978879 | 65978927 | 65978879 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65978759 | 65978790 | 65978759 | ID=MS.gene51111.t1.exon4;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65978759 | 65978790 | 65978759 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65978565 | 65978645 | 65978565 | ID=MS.gene51111.t1.exon5;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65978565 | 65978645 | 65978565 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65978353 | 65978466 | 65978353 | ID=MS.gene51111.t1.exon6;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65978353 | 65978466 | 65978353 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65978120 | 65978208 | 65978120 | ID=MS.gene51111.t1.exon7;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65978120 | 65978208 | 65978120 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65977581 | 65977700 | 65977581 | ID=MS.gene51111.t1.exon8;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65977581 | 65977700 | 65977581 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65977362 | 65977484 | 65977362 | ID=MS.gene51111.t1.exon9;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65977362 | 65977484 | 65977362 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65977155 | 65977221 | 65977155 | ID=MS.gene51111.t1.exon10;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65977155 | 65977221 | 65977155 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65976958 | 65977037 | 65976958 | ID=MS.gene51111.t1.exon11;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65976958 | 65977037 | 65976958 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| chr5.1 | exon | 65976285 | 65976372 | 65976285 | ID=MS.gene51111.t1.exon12;Parent=MS.gene51111.t1 |
| chr5.1 | CDS | 65976285 | 65976372 | 65976285 | ID=cds.MS.gene51111.t1;Parent=MS.gene51111.t1 |
| Gene Sequence |
| Protein sequence |
