Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069415.t1 | XP_024626193.1 | 99 | 677 | 7 | 0 | 1 | 677 | 1 | 677 | 0.00E+00 | 1291.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069415.t1 | Q9FNR3 | 40.0 | 657 | 354 | 5 | 10 | 665 | 8 | 625 | 2.8e-131 | 470.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069415.t1 | A0A072TXQ3 | 99.0 | 677 | 7 | 0 | 1 | 677 | 1 | 677 | 0.0e+00 | 1291.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene069415 | 0.827238 | 1.75E-54 | -1.69E-46 |
MS.gene049159 | MS.gene069415 | 0.80606 | 9.88E-50 | -1.69E-46 |
MS.gene049254 | MS.gene069415 | 0.814886 | 1.23E-51 | -1.69E-46 |
MS.gene049283 | MS.gene069415 | 0.824337 | 8.52E-54 | -1.69E-46 |
MS.gene049368 | MS.gene069415 | 0.81444 | 1.54E-51 | -1.69E-46 |
MS.gene049452 | MS.gene069415 | 0.828501 | 8.68E-55 | -1.69E-46 |
MS.gene049499 | MS.gene069415 | 0.824472 | 7.93E-54 | -1.69E-46 |
MS.gene049983 | MS.gene069415 | 0.859075 | 5.32E-63 | -1.69E-46 |
MS.gene050026 | MS.gene069415 | 0.802926 | 4.45E-49 | -1.69E-46 |
MS.gene050654 | MS.gene069415 | 0.85738 | 1.70E-62 | -1.69E-46 |
MS.gene050737 | MS.gene069415 | 0.817257 | 3.62E-52 | -1.69E-46 |
MS.gene050759 | MS.gene069415 | 0.815645 | 8.32E-52 | -1.69E-46 |
MS.gene050941 | MS.gene069415 | 0.820719 | 5.91E-53 | -1.69E-46 |
MS.gene050962 | MS.gene069415 | 0.804696 | 1.91E-49 | -1.69E-46 |
MS.gene051198 | MS.gene069415 | 0.841438 | 4.75E-58 | -1.69E-46 |
MS.gene051279 | MS.gene069415 | 0.809898 | 1.51E-50 | -1.69E-46 |
MS.gene051332 | MS.gene069415 | 0.820306 | 7.35E-53 | -1.69E-46 |
MS.gene051541 | MS.gene069415 | 0.81837 | 2.03E-52 | -1.69E-46 |
MS.gene051800 | MS.gene069415 | 0.837919 | 3.91E-57 | -1.69E-46 |
MS.gene052016 | MS.gene069415 | 0.807216 | 5.63E-50 | -1.69E-46 |
MS.gene052037 | MS.gene069415 | 0.82095 | 5.23E-53 | -1.69E-46 |
MS.gene052118 | MS.gene069415 | 0.83668 | 8.12E-57 | -1.69E-46 |
MS.gene052463 | MS.gene069415 | 0.830525 | 2.80E-55 | -1.69E-46 |
MS.gene052493 | MS.gene069415 | 0.804894 | 1.74E-49 | -1.69E-46 |
MS.gene052582 | MS.gene069415 | 0.823143 | 1.62E-53 | -1.69E-46 |
MS.gene052584 | MS.gene069415 | 0.82118 | 4.63E-53 | -1.69E-46 |
MS.gene052674 | MS.gene069415 | 0.819172 | 1.34E-52 | -1.69E-46 |
MS.gene052675 | MS.gene069415 | 0.818338 | 2.06E-52 | -1.69E-46 |
MS.gene052677 | MS.gene069415 | 0.826269 | 2.98E-54 | -1.69E-46 |
MS.gene05308 | MS.gene069415 | 0.803249 | 3.81E-49 | -1.69E-46 |
MS.gene05350 | MS.gene069415 | 0.846052 | 2.77E-59 | -1.69E-46 |
MS.gene05423 | MS.gene069415 | 0.824151 | 9.43E-54 | -1.69E-46 |
MS.gene054479 | MS.gene069415 | 0.856766 | 2.58E-62 | -1.69E-46 |
MS.gene054489 | MS.gene069415 | 0.813695 | 2.25E-51 | -1.69E-46 |
MS.gene05458 | MS.gene069415 | 0.827458 | 1.55E-54 | -1.69E-46 |
MS.gene054641 | MS.gene069415 | 0.845484 | 3.95E-59 | -1.69E-46 |
MS.gene054651 | MS.gene069415 | 0.822556 | 2.22E-53 | -1.69E-46 |
MS.gene054892 | MS.gene069415 | 0.81366 | 2.29E-51 | -1.69E-46 |
MS.gene054893 | MS.gene069415 | 0.814296 | 1.66E-51 | -1.69E-46 |
MS.gene054991 | MS.gene069415 | 0.801385 | 9.23E-49 | -1.69E-46 |
MS.gene055327 | MS.gene069415 | 0.828342 | 9.48E-55 | -1.69E-46 |
MS.gene055864 | MS.gene069415 | 0.836185 | 1.09E-56 | -1.69E-46 |
MS.gene055926 | MS.gene069415 | 0.824497 | 7.82E-54 | -1.69E-46 |
MS.gene056174 | MS.gene069415 | 0.847 | 1.53E-59 | -1.69E-46 |
MS.gene056308 | MS.gene069415 | 0.810325 | 1.22E-50 | -1.69E-46 |
MS.gene056480 | MS.gene069415 | 0.826699 | 2.35E-54 | -1.69E-46 |
MS.gene056699 | MS.gene069415 | 0.800322 | 1.52E-48 | -1.69E-46 |
MS.gene056776 | MS.gene069415 | 0.820679 | 6.04E-53 | -1.69E-46 |
MS.gene05686 | MS.gene069415 | 0.811642 | 6.32E-51 | -1.69E-46 |
MS.gene056873 | MS.gene069415 | 0.802889 | 4.53E-49 | -1.69E-46 |
MS.gene05690 | MS.gene069415 | 0.820642 | 6.16E-53 | -1.69E-46 |
MS.gene056973 | MS.gene069415 | 0.810178 | 1.31E-50 | -1.69E-46 |
MS.gene057208 | MS.gene069415 | 0.830829 | 2.36E-55 | -1.69E-46 |
MS.gene057371 | MS.gene069415 | 0.802626 | 5.13E-49 | -1.69E-46 |
MS.gene057598 | MS.gene069415 | 0.817905 | 2.59E-52 | -1.69E-46 |
MS.gene057915 | MS.gene069415 | 0.807699 | 4.45E-50 | -1.69E-46 |
MS.gene057919 | MS.gene069415 | 0.806871 | 6.66E-50 | -1.69E-46 |
MS.gene058010 | MS.gene069415 | 0.803751 | 3.00E-49 | -1.69E-46 |
MS.gene058081 | MS.gene069415 | 0.846254 | 2.44E-59 | -1.69E-46 |
MS.gene058159 | MS.gene069415 | 0.841718 | 4.01E-58 | -1.69E-46 |
MS.gene058223 | MS.gene069415 | -0.816553 | 5.21E-52 | -1.69E-46 |
MS.gene058279 | MS.gene069415 | 0.812051 | 5.15E-51 | -1.69E-46 |
MS.gene058429 | MS.gene069415 | 0.848365 | 6.42E-60 | -1.69E-46 |
MS.gene058625 | MS.gene069415 | 0.807925 | 3.98E-50 | -1.69E-46 |
MS.gene058781 | MS.gene069415 | 0.809058 | 2.28E-50 | -1.69E-46 |
MS.gene058783 | MS.gene069415 | 0.810932 | 9.02E-51 | -1.69E-46 |
MS.gene058979 | MS.gene069415 | 0.813283 | 2.77E-51 | -1.69E-46 |
MS.gene05897 | MS.gene069415 | 0.805581 | 1.25E-49 | -1.69E-46 |
MS.gene059170 | MS.gene069415 | 0.807084 | 6.01E-50 | -1.69E-46 |
MS.gene059224 | MS.gene069415 | 0.813144 | 2.97E-51 | -1.69E-46 |
MS.gene059283 | MS.gene069415 | 0.819327 | 1.23E-52 | -1.69E-46 |
MS.gene059439 | MS.gene069415 | 0.822219 | 2.66E-53 | -1.69E-46 |
MS.gene059842 | MS.gene069415 | 0.802173 | 6.36E-49 | -1.69E-46 |
MS.gene059952 | MS.gene069415 | 0.801201 | 1.01E-48 | -1.69E-46 |
MS.gene060011 | MS.gene069415 | 0.822526 | 2.26E-53 | -1.69E-46 |
MS.gene060259 | MS.gene069415 | 0.817442 | 3.29E-52 | -1.69E-46 |
MS.gene060373 | MS.gene069415 | 0.811568 | 6.56E-51 | -1.69E-46 |
MS.gene060435 | MS.gene069415 | 0.853117 | 2.95E-61 | -1.69E-46 |
MS.gene060527 | MS.gene069415 | 0.82767 | 1.38E-54 | -1.69E-46 |
MS.gene06052 | MS.gene069415 | 0.871285 | 7.68E-67 | -1.69E-46 |
MS.gene060777 | MS.gene069415 | 0.837904 | 3.95E-57 | -1.69E-46 |
MS.gene060851 | MS.gene069415 | 0.8078 | 4.24E-50 | -1.69E-46 |
MS.gene060852 | MS.gene069415 | 0.805253 | 1.46E-49 | -1.69E-46 |
MS.gene060932 | MS.gene069415 | 0.874688 | 5.56E-68 | -1.69E-46 |
MS.gene060933 | MS.gene069415 | 0.800429 | 1.45E-48 | -1.69E-46 |
MS.gene060935 | MS.gene069415 | 0.812913 | 3.34E-51 | -1.69E-46 |
MS.gene060937 | MS.gene069415 | 0.825821 | 3.80E-54 | -1.69E-46 |
MS.gene061100 | MS.gene069415 | 0.823939 | 1.06E-53 | -1.69E-46 |
MS.gene06121 | MS.gene069415 | 0.844458 | 7.47E-59 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene069415 | MS.gene79408 | PPI |
MS.gene069415 | MS.gene83828 | PPI |
MS.gene069415 | MS.gene79406 | PPI |
MS.gene069415 | MS.gene79407 | PPI |
MS.gene069415 | MS.gene83829 | PPI |
MS.gene069415 | MS.gene93502 | PPI |
MS.gene069415 | MS.gene28226 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069415.t1 | MTR_7g013770 | 99.114 | 677 | 6 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1382 |
MS.gene069415.t1 | MTR_3g025900 | 41.291 | 666 | 343 | 7 | 13 | 677 | 1 | 619 | 1.99e-173 | 509 |
MS.gene069415.t1 | MTR_4g103540 | 43.029 | 581 | 296 | 13 | 116 | 677 | 126 | 690 | 1.18e-137 | 419 |
MS.gene069415.t1 | MTR_8g021330 | 38.816 | 608 | 318 | 14 | 98 | 666 | 13 | 605 | 3.64e-122 | 377 |
MS.gene069415.t1 | MTR_5g073450 | 32.931 | 662 | 401 | 13 | 16 | 667 | 6 | 634 | 1.44e-110 | 348 |
MS.gene069415.t1 | MTR_3g031130 | 32.730 | 663 | 387 | 11 | 16 | 667 | 6 | 620 | 8.92e-100 | 319 |
MS.gene069415.t1 | MTR_1g057560 | 32.143 | 532 | 313 | 7 | 150 | 666 | 127 | 625 | 1.61e-88 | 290 |
MS.gene069415.t1 | MTR_1g090620 | 31.725 | 539 | 313 | 8 | 154 | 666 | 132 | 641 | 1.77e-88 | 290 |
MS.gene069415.t1 | MTR_7g026630 | 30.948 | 601 | 384 | 15 | 83 | 666 | 64 | 650 | 8.14e-86 | 283 |
MS.gene069415.t1 | MTR_2g096230 | 32.369 | 553 | 333 | 10 | 117 | 666 | 67 | 581 | 1.54e-85 | 280 |
MS.gene069415.t1 | MTR_6g033310 | 30.726 | 537 | 323 | 8 | 150 | 667 | 220 | 726 | 6.77e-83 | 277 |
MS.gene069415.t1 | MTR_5g073460 | 35.669 | 471 | 284 | 8 | 206 | 669 | 237 | 695 | 6.04e-82 | 274 |
MS.gene069415.t1 | MTR_4g062330 | 29.908 | 545 | 362 | 9 | 118 | 660 | 72 | 598 | 8.49e-75 | 253 |
MS.gene069415.t1 | MTR_1g067480 | 32.054 | 521 | 327 | 10 | 151 | 664 | 100 | 600 | 1.30e-74 | 252 |
MS.gene069415.t1 | MTR_1g117090 | 29.912 | 565 | 349 | 12 | 150 | 677 | 123 | 677 | 1.63e-73 | 251 |
MS.gene069415.t1 | MTR_1g067460 | 31.549 | 523 | 328 | 11 | 151 | 664 | 98 | 599 | 4.04e-67 | 231 |
MS.gene069415.t1 | MTR_5g073620 | 30.645 | 372 | 212 | 5 | 217 | 572 | 268 | 609 | 2.53e-48 | 183 |
MS.gene069415.t1 | MTR_5g073620 | 33.714 | 175 | 112 | 2 | 498 | 669 | 898 | 1071 | 3.63e-20 | 96.3 |
MS.gene069415.t1 | MTR_5g074130 | 27.313 | 454 | 298 | 9 | 225 | 670 | 250 | 679 | 1.46e-41 | 162 |
MS.gene069415.t1 | MTR_5g073480 | 26.398 | 447 | 241 | 11 | 215 | 655 | 256 | 620 | 5.73e-37 | 147 |
MS.gene069415.t1 | MTR_4g008260 | 26.519 | 543 | 311 | 15 | 157 | 676 | 174 | 651 | 1.72e-35 | 143 |
MS.gene069415.t1 | MTR_5g073920 | 26.027 | 438 | 280 | 9 | 240 | 668 | 259 | 661 | 1.38e-34 | 140 |
MS.gene069415.t1 | MTR_3g464010 | 26.681 | 476 | 303 | 14 | 209 | 669 | 227 | 671 | 6.39e-32 | 132 |
MS.gene069415.t1 | MTR_1g009620 | 24.112 | 535 | 336 | 12 | 156 | 672 | 183 | 665 | 2.77e-29 | 124 |
MS.gene069415.t1 | MTR_1g017910 | 25.721 | 416 | 283 | 9 | 237 | 637 | 251 | 655 | 2.95e-29 | 124 |
MS.gene069415.t1 | MTR_5g073900 | 25.945 | 397 | 231 | 11 | 247 | 638 | 4 | 342 | 7.86e-28 | 115 |
MS.gene069415.t1 | MTR_5g073770 | 32.075 | 212 | 132 | 2 | 201 | 400 | 165 | 376 | 2.32e-25 | 109 |
MS.gene069415.t1 | MTR_5g093530 | 25.876 | 371 | 223 | 8 | 300 | 664 | 246 | 570 | 6.14e-25 | 110 |
MS.gene069415.t1 | MTR_5g073780 | 33.143 | 175 | 113 | 2 | 498 | 669 | 53 | 226 | 5.71e-21 | 92.8 |
MS.gene069415.t1 | MTR_5g073490 | 32.335 | 167 | 92 | 3 | 504 | 665 | 3 | 153 | 1.44e-18 | 83.6 |
MS.gene069415.t1 | MTR_0229s0040 | 28.141 | 199 | 127 | 4 | 488 | 672 | 24 | 220 | 1.47e-16 | 80.1 |
MS.gene069415.t1 | MTR_5g073960 | 24.434 | 221 | 146 | 6 | 187 | 403 | 213 | 416 | 3.43e-13 | 72.4 |
MS.gene069415.t1 | MTR_5g073820 | 25.000 | 268 | 133 | 7 | 196 | 428 | 152 | 386 | 5.42e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069415.t1 | AT3G29400 | 48.748 | 679 | 310 | 9 | 12 | 677 | 5 | 658 | 0.0 | 583 |
MS.gene069415.t1 | AT5G61010 | 40.183 | 657 | 353 | 6 | 10 | 665 | 8 | 625 | 1.63e-164 | 487 |
MS.gene069415.t1 | AT5G61010 | 40.183 | 657 | 353 | 6 | 10 | 665 | 8 | 625 | 1.63e-164 | 487 |
MS.gene069415.t1 | AT5G50380 | 42.211 | 597 | 290 | 12 | 109 | 677 | 113 | 682 | 3.31e-149 | 449 |
MS.gene069415.t1 | AT3G14090 | 38.333 | 540 | 295 | 10 | 153 | 666 | 86 | 613 | 3.82e-118 | 367 |
MS.gene069415.t1 | AT1G72470 | 36.438 | 612 | 323 | 15 | 101 | 666 | 30 | 621 | 3.93e-114 | 357 |
MS.gene069415.t1 | AT1G54090 | 41.203 | 449 | 249 | 7 | 226 | 666 | 170 | 611 | 2.10e-109 | 344 |
MS.gene069415.t1 | AT5G58430 | 31.429 | 665 | 392 | 12 | 16 | 667 | 6 | 619 | 4.35e-103 | 328 |
MS.gene069415.t1 | AT5G03540 | 30.396 | 681 | 391 | 15 | 24 | 676 | 13 | 638 | 1.39e-90 | 295 |
MS.gene069415.t1 | AT5G03540 | 32.784 | 546 | 312 | 8 | 151 | 676 | 13 | 523 | 1.50e-90 | 291 |
MS.gene069415.t1 | AT1G07000 | 30.344 | 669 | 372 | 16 | 16 | 667 | 6 | 597 | 2.03e-89 | 291 |
MS.gene069415.t1 | AT5G03540 | 30.029 | 686 | 395 | 14 | 24 | 666 | 13 | 656 | 6.44e-89 | 291 |
MS.gene069415.t1 | AT5G52340 | 30.783 | 562 | 348 | 8 | 115 | 666 | 93 | 623 | 5.41e-86 | 283 |
MS.gene069415.t1 | AT5G59730 | 32.737 | 559 | 350 | 11 | 118 | 668 | 60 | 600 | 4.10e-83 | 275 |
MS.gene069415.t1 | AT5G59730 | 32.737 | 559 | 350 | 11 | 118 | 668 | 60 | 600 | 5.64e-83 | 275 |
MS.gene069415.t1 | AT2G28640 | 30.577 | 520 | 328 | 6 | 151 | 669 | 94 | 581 | 1.46e-81 | 270 |
MS.gene069415.t1 | AT5G13150 | 31.690 | 568 | 356 | 14 | 114 | 667 | 96 | 645 | 2.45e-81 | 271 |
MS.gene069415.t1 | AT1G07725 | 32.563 | 519 | 324 | 9 | 151 | 666 | 96 | 591 | 5.23e-81 | 269 |
MS.gene069415.t1 | AT5G13990 | 30.635 | 630 | 353 | 17 | 76 | 667 | 99 | 682 | 1.48e-79 | 267 |
MS.gene069415.t1 | AT2G39380 | 29.211 | 558 | 365 | 7 | 118 | 667 | 76 | 611 | 7.55e-77 | 258 |
MS.gene069415.t1 | AT3G09520 | 29.000 | 600 | 367 | 13 | 88 | 664 | 41 | 604 | 1.70e-70 | 241 |
MS.gene069415.t1 | AT5G52350 | 30.684 | 453 | 284 | 4 | 221 | 666 | 148 | 577 | 3.09e-69 | 237 |
MS.gene069415.t1 | AT3G09530 | 28.996 | 538 | 349 | 8 | 141 | 666 | 86 | 602 | 5.68e-65 | 226 |
MS.gene069415.t1 | AT3G55150 | 28.342 | 561 | 368 | 9 | 117 | 667 | 75 | 611 | 3.16e-64 | 224 |
MS.gene069415.t1 | AT2G28650 | 29.320 | 515 | 307 | 9 | 151 | 664 | 96 | 554 | 5.52e-59 | 209 |
MS.gene069415.t1 | AT4G31540 | 25.056 | 443 | 303 | 7 | 232 | 664 | 231 | 654 | 1.68e-33 | 137 |
MS.gene069415.t1 | AT1G51640 | 24.169 | 451 | 297 | 9 | 237 | 665 | 199 | 626 | 6.22e-23 | 104 |
Find 146 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCAAAAGGTTGCCTATTC+TGG | 0.158452 | 7.2:-83613388 | None:intergenic |
AGACATATTGTGATGGCTTT+AGG | 0.215581 | 7.2:+83612936 | MS.gene069415:CDS |
TCAATCGATGATTTGGGATT+TGG | 0.227503 | 7.2:+83613187 | MS.gene069415:CDS |
GAGAAGGAGGAGGGGAAGAT+AGG | 0.232008 | 7.2:+83613041 | MS.gene069415:CDS |
CAAAGATCAAAAGATGGATT+TGG | 0.241414 | 7.2:+83613741 | MS.gene069415:CDS |
CTTCTCACTTTGTATGTTCA+TGG | 0.251343 | 7.2:-83613024 | None:intergenic |
GTTCGCCTTCTCCGAAAATT+TGG | 0.255340 | 7.2:-83613817 | None:intergenic |
GGGCTTTGAAAATCTTTGTT+AGG | 0.261655 | 7.2:+83613762 | MS.gene069415:CDS |
AGGAAGATCAATCGATGATT+TGG | 0.283223 | 7.2:+83613180 | MS.gene069415:CDS |
GACATATTGTGATGGCTTTA+GGG | 0.283742 | 7.2:+83612937 | MS.gene069415:CDS |
TATTGAAGATGTCTTGAAAA+TGG | 0.283952 | 7.2:+83613700 | MS.gene069415:CDS |
TGATTTAGAAAATTATCTTT+TGG | 0.292941 | 7.2:+83614828 | MS.gene069415:CDS |
TACATGGCTGAAAAGGTTAA+AGG | 0.293386 | 7.2:+83614442 | MS.gene069415:CDS |
TTCCATTCTCAACTTTCTTA+AGG | 0.294818 | 7.2:+83614561 | MS.gene069415:CDS |
AGTTGTTGCAAAATCCTATT+AGG | 0.296540 | 7.2:+83614872 | MS.gene069415:CDS |
CAATCGATGATTTGGGATTT+GGG | 0.298646 | 7.2:+83613188 | MS.gene069415:CDS |
TTAAAGTGATTCAAGCTTAT+AGG | 0.315348 | 7.2:+83614746 | MS.gene069415:CDS |
ACAACGACTTGGTTTGATTC+AGG | 0.317391 | 7.2:+83613139 | MS.gene069415:CDS |
AGGAGGAGGGGAAGATAGGG+AGG | 0.319656 | 7.2:+83613045 | MS.gene069415:CDS |
AAGCTTATACCATTGTTAGA+AGG | 0.328404 | 7.2:+83613630 | MS.gene069415:CDS |
TCGGCTTCGAGGATATTTAC+AGG | 0.329702 | 7.2:+83614659 | MS.gene069415:CDS |
TGCTATTATCATCTCCTAAT+AGG | 0.331305 | 7.2:-83614886 | None:intergenic |
AAAGATCAAAAGATGGATTT+GGG | 0.331630 | 7.2:+83613742 | MS.gene069415:CDS |
ACAAAACAAGCTTGACTAAC+AGG | 0.350658 | 7.2:-83613839 | None:intergenic |
GAAGATAGGGAGGGAAAAGG+AGG | 0.356692 | 7.2:+83613055 | MS.gene069415:CDS |
AGATTTGCGGATTTCTATAT+CGG | 0.356841 | 7.2:+83614723 | MS.gene069415:CDS |
TTCAGGAGAAAATAATGAAA+TGG | 0.362671 | 7.2:+83613156 | MS.gene069415:CDS |
TTTGGTGAAGCTATGTCTAT+TGG | 0.365289 | 7.2:+83613899 | MS.gene069415:CDS |
AGAAGGAGGAGGGGAAGATA+GGG | 0.365916 | 7.2:+83613042 | MS.gene069415:CDS |
CTCAACTTTCTTAAGGATGA+AGG | 0.371916 | 7.2:+83614568 | MS.gene069415:CDS |
TGACATCAATGCTTTGTATT+CGG | 0.372086 | 7.2:+83613988 | MS.gene069415:CDS |
TTCAGCTTCGCGAAGATTTG+CGG | 0.372177 | 7.2:+83614710 | MS.gene069415:CDS |
GGGGAAGATAGGGAGGGAAA+AGG | 0.388497 | 7.2:+83613052 | MS.gene069415:CDS |
AAGAAGATTCTGGCTGATCT+TGG | 0.397682 | 7.2:+83612987 | MS.gene069415:CDS |
AATGAACAAACACTCATCTA+AGG | 0.398840 | 7.2:-83613657 | None:intergenic |
GGAAGATCAATCGATGATTT+GGG | 0.400737 | 7.2:+83613181 | MS.gene069415:CDS |
TTGGCTTCTGTTATCATCTT+CGG | 0.401388 | 7.2:-83614281 | None:intergenic |
CAATGGCTGTTGAGGAATCT+AGG | 0.406090 | 7.2:+83612865 | None:intergenic |
GGACGAGGTGGACGAGGAGG+AGG | 0.408834 | 7.2:+83613094 | MS.gene069415:CDS |
TCTTCGCGAAGCTGAACATC+TGG | 0.409566 | 7.2:-83614703 | None:intergenic |
GGCTTTGAAAATCTTTGTTA+GGG | 0.412401 | 7.2:+83613763 | MS.gene069415:CDS |
TCAGGAGAAAATAATGAAAT+GGG | 0.414181 | 7.2:+83613157 | MS.gene069415:CDS |
GTGTTTGTTCATTCTTGAAA+TGG | 0.417456 | 7.2:+83613667 | MS.gene069415:CDS |
TTCGGACGAGGTTGGTTCCT+CGG | 0.417915 | 7.2:+83614006 | MS.gene069415:CDS |
CGTGTCAGGTGACGATGAAA+TGG | 0.419107 | 7.2:-83614248 | None:intergenic |
GAAAATGGAATGGGGTACTT+TGG | 0.421152 | 7.2:+83613715 | MS.gene069415:CDS |
CCAAGACTGAAGCAAATGAT+AGG | 0.421729 | 7.2:-83614342 | None:intergenic |
CAAGCTTATAGGACATTTGT+TGG | 0.424622 | 7.2:+83614757 | MS.gene069415:CDS |
CCTACATTACATGGCTGAAA+AGG | 0.424669 | 7.2:+83614435 | MS.gene069415:CDS |
ATTCAGTGCTTCGCTGTAAT+CGG | 0.425187 | 7.2:-83614194 | None:intergenic |
ATCGTCACCTGACACGAGTC+CGG | 0.427795 | 7.2:+83614255 | MS.gene069415:CDS |
AAATACTCAGACGTTTCTTC+AGG | 0.429562 | 7.2:-83613212 | None:intergenic |
GAGAATTCGTATCAATTTCT+CGG | 0.430289 | 7.2:-83613933 | None:intergenic |
TTCGTATCAATTTCTCGGGT+TGG | 0.433899 | 7.2:-83613928 | None:intergenic |
CCTATCATTTGCTTCAGTCT+TGG | 0.436027 | 7.2:+83614342 | MS.gene069415:CDS |
AGCGAGGAAGATGTTGTTGA+TGG | 0.439521 | 7.2:+83613434 | MS.gene069415:CDS |
TTCTCTTCTCTTTCTAACTC+AGG | 0.440235 | 7.2:-83612897 | None:intergenic |
TGTCATTGATTTAGTTCATC+CGG | 0.441468 | 7.2:+83613538 | MS.gene069415:CDS |
ATCCTTAAGAAAGTTGAGAA+TGG | 0.446088 | 7.2:-83614563 | None:intergenic |
CGGCTGTGATTCCTGATCTC+AGG | 0.446347 | 7.2:+83613558 | MS.gene069415:CDS |
TCTGAACTTAGGATCATATT+CGG | 0.456601 | 7.2:+83614466 | MS.gene069415:CDS |
GCAACCTGCTTATCCAGAAT+AGG | 0.463293 | 7.2:+83613375 | MS.gene069415:CDS |
CTGTTATCATCTTCGGTACC+CGG | 0.467583 | 7.2:-83614274 | None:intergenic |
AGAATTCGTATCAATTTCTC+GGG | 0.468076 | 7.2:-83613932 | None:intergenic |
ACATGGCTGAAAAGGTTAAA+GGG | 0.470527 | 7.2:+83614443 | MS.gene069415:CDS |
TCGGTACCCGGACTCGTGTC+AGG | 0.474489 | 7.2:-83614262 | None:intergenic |
AATGGATCCGAAAACACAAC+TGG | 0.475821 | 7.2:+83614494 | MS.gene069415:CDS |
AAGCTTCTACCTCGGCTTCG+AGG | 0.476916 | 7.2:+83614648 | MS.gene069415:CDS |
CACGAGGTTCTGAACAGATT+GGG | 0.480214 | 7.2:+83614043 | MS.gene069415:CDS |
AAGTGATGAAAAGAAGATTC+TGG | 0.481173 | 7.2:+83612977 | MS.gene069415:CDS |
CCGTCAACAACGCCTTTAGT+TGG | 0.482370 | 7.2:+83614118 | MS.gene069415:CDS |
TCCTGGTAGATTTCCCTCAA+TGG | 0.483428 | 7.2:+83614309 | MS.gene069415:CDS |
GCGCATATTGATCGAGAAGT+TGG | 0.488485 | 7.2:+83613253 | MS.gene069415:CDS |
CAATGCTTTGTATTCGGACG+AGG | 0.488922 | 7.2:+83613994 | MS.gene069415:CDS |
AGATGTCTTGAAAATGGAAT+GGG | 0.491461 | 7.2:+83613706 | MS.gene069415:CDS |
GATATGTTATGAATTATCTT+CGG | 0.492481 | 7.2:+83614164 | MS.gene069415:CDS |
GAGACATACTCAGGTTCAAA+AGG | 0.492494 | 7.2:-83613401 | None:intergenic |
TGTTCATTCTTGAAATGGAA+AGG | 0.497581 | 7.2:+83613672 | MS.gene069415:CDS |
CCAACTAAAGGCGTTGTTGA+CGG | 0.497916 | 7.2:-83614118 | None:intergenic |
GTTGCCTATTCTGGATAAGC+AGG | 0.498736 | 7.2:-83613379 | None:intergenic |
TTGATTATCAATGGCTGTTG+AGG | 0.499717 | 7.2:+83612857 | None:intergenic |
AAAGGAGGATGATATAGATA+AGG | 0.499854 | 7.2:+83613070 | MS.gene069415:CDS |
CTTATAGGACATTTGTTGGA+AGG | 0.502026 | 7.2:+83614761 | MS.gene069415:CDS |
CCACGAGGTTCTGAACAGAT+TGG | 0.503504 | 7.2:+83614042 | MS.gene069415:CDS |
AGGAATTGCCGCGCCATTGA+GGG | 0.506822 | 7.2:-83614322 | None:intergenic |
TTTACAGGATTCAAACAGCT+TGG | 0.507788 | 7.2:+83614674 | MS.gene069415:CDS |
TTTGCGATACACCTGAGATC+AGG | 0.508198 | 7.2:-83613569 | None:intergenic |
ATCAATTTCTCGGGTTGGTG+AGG | 0.514697 | 7.2:-83613923 | None:intergenic |
AGGTTAAAGGGTCTGAACTT+AGG | 0.515044 | 7.2:+83614455 | MS.gene069415:CDS |
TGTATCCCTCCACCAACTAA+AGG | 0.515506 | 7.2:-83614130 | None:intergenic |
GGGTTTATCTTGCAAGTGAA+AGG | 0.515546 | 7.2:+83613783 | MS.gene069415:CDS |
GAGGAGGAGGAAGAAGGTGT+TGG | 0.517714 | 7.2:+83613107 | MS.gene069415:CDS |
TCAACAACGCCTTTAGTTGG+TGG | 0.518800 | 7.2:+83614121 | MS.gene069415:CDS |
AACAGAAGCCAAGCATCTCC+TGG | 0.521198 | 7.2:+83614292 | MS.gene069415:CDS |
TCGTCACCTGACACGAGTCC+GGG | 0.521282 | 7.2:+83614256 | MS.gene069415:CDS |
AGCTTATACCATTGTTAGAA+GGG | 0.522929 | 7.2:+83613631 | MS.gene069415:CDS |
AATGAACAACCTACATTACA+TGG | 0.524061 | 7.2:+83614426 | MS.gene069415:CDS |
GAAATCTACCAGGAGATGCT+TGG | 0.524343 | 7.2:-83614300 | None:intergenic |
TGGTTTCAAAGATCAAAAGA+TGG | 0.529315 | 7.2:+83613735 | MS.gene069415:CDS |
AAGATGTCTTGAAAATGGAA+TGG | 0.530741 | 7.2:+83613705 | MS.gene069415:CDS |
TAAGGAGGACGAGGTGGACG+AGG | 0.533562 | 7.2:+83613088 | MS.gene069415:CDS |
GGAGGATGATATAGATAAGG+AGG | 0.534132 | 7.2:+83613073 | MS.gene069415:CDS |
GGCTTATAGTGTTCTTCAGA+CGG | 0.538239 | 7.2:+83613325 | MS.gene069415:CDS |
TCTGAAAGATCAAGAAGAAG+AGG | 0.540005 | 7.2:+83614222 | MS.gene069415:CDS |
TGATATAGATAAGGAGGACG+AGG | 0.540858 | 7.2:+83613079 | MS.gene069415:CDS |
GAATACAAAGCATTGATGTC+AGG | 0.541545 | 7.2:-83613986 | None:intergenic |
ACAACGCCTTTAGTTGGTGG+AGG | 0.547732 | 7.2:+83614124 | MS.gene069415:CDS |
TTTGAGACAGAATTTGAACC+AGG | 0.551804 | 7.2:-83614601 | None:intergenic |
TGAAATACGAGAGAGCTAGT+TGG | 0.555215 | 7.2:+83614536 | MS.gene069415:CDS |
GTGGACGAGGAGGAGGAAGA+AGG | 0.558808 | 7.2:+83613101 | MS.gene069415:CDS |
GGAGGACGAGGTGGACGAGG+AGG | 0.563413 | 7.2:+83613091 | MS.gene069415:CDS |
TTCATAACATATCTCGCCAA+TGG | 0.563562 | 7.2:-83614154 | None:intergenic |
GCCATTGAGGGAAATCTACC+AGG | 0.565256 | 7.2:-83614310 | None:intergenic |
GGATCATATTCGGAGACGAA+TGG | 0.566493 | 7.2:+83614476 | MS.gene069415:CDS |
GATGAAGGAATTCACGCTCC+TGG | 0.569538 | 7.2:+83614583 | MS.gene069415:CDS |
TTCTTCAGACGGCTATGACA+CGG | 0.570975 | 7.2:+83613336 | MS.gene069415:CDS |
TAGGAATTGCCGCGCCATTG+AGG | 0.571255 | 7.2:-83614323 | None:intergenic |
AAGTTACGAAGCTTCTACCT+CGG | 0.578858 | 7.2:+83614640 | MS.gene069415:CDS |
TGTAAATATCCTCGAAGCCG+AGG | 0.581914 | 7.2:-83614657 | None:intergenic |
GCTTTGTATTCGGACGAGGT+TGG | 0.582361 | 7.2:+83613998 | MS.gene069415:CDS |
GGAGGAGGGGAAGATAGGGA+GGG | 0.582716 | 7.2:+83613046 | MS.gene069415:CDS |
GCGAGGAAGATGTTGTTGAT+GGG | 0.586419 | 7.2:+83613435 | MS.gene069415:CDS |
TGGTGGAGGGATACATCCAT+TGG | 0.593262 | 7.2:+83614138 | MS.gene069415:CDS |
CATGAACATACAAAGTGAGA+AGG | 0.595930 | 7.2:+83613025 | MS.gene069415:CDS |
CAACGCCTTTAGTTGGTGGA+GGG | 0.597098 | 7.2:+83614125 | MS.gene069415:CDS |
GGAGAAAATAATGAAATGGG+AGG | 0.598922 | 7.2:+83613160 | MS.gene069415:CDS |
GATCGAAACGAGACATACTC+AGG | 0.599078 | 7.2:-83613410 | None:intergenic |
CATACAAAGTGAGAAGGAGG+AGG | 0.600227 | 7.2:+83613031 | MS.gene069415:CDS |
CTGAGATCAGGAATCACAGC+CGG | 0.603127 | 7.2:-83613557 | None:intergenic |
TTTATCTTGCAAGTGAAAGG+TGG | 0.606242 | 7.2:+83613786 | MS.gene069415:CDS |
ATCAATGACATGCTCTTCAG+TGG | 0.607832 | 7.2:-83613525 | None:intergenic |
TACAAAGTGAGAAGGAGGAG+GGG | 0.610000 | 7.2:+83613033 | MS.gene069415:CDS |
GGTGTTATTGAACAACGACT+TGG | 0.615375 | 7.2:+83613128 | MS.gene069415:CDS |
TATAGATAAGGAGGACGAGG+TGG | 0.620009 | 7.2:+83613082 | MS.gene069415:CDS |
TAAGGCATCCCTTCTAACAA+TGG | 0.621969 | 7.2:-83613639 | None:intergenic |
ATACAAAGTGAGAAGGAGGA+GGG | 0.633932 | 7.2:+83613032 | MS.gene069415:CDS |
GAACATACAAAGTGAGAAGG+AGG | 0.636230 | 7.2:+83613028 | MS.gene069415:CDS |
ATATTGATCGAGAAGTTGGA+AGG | 0.643451 | 7.2:+83613257 | MS.gene069415:CDS |
TGTCTCGTTTCGATCGAGCG+AGG | 0.647882 | 7.2:+83613418 | MS.gene069415:CDS |
GTAGATTTCCCTCAATGGCG+CGG | 0.659563 | 7.2:+83614314 | MS.gene069415:CDS |
TGCAGCAAGACATATTGTGA+TGG | 0.663518 | 7.2:+83612929 | MS.gene069415:CDS |
AGTCTTGGAGAACAATCTCG+AGG | 0.679517 | 7.2:+83614357 | MS.gene069415:CDS |
GGTTCACTTTGAATGCCACG+AGG | 0.713802 | 7.2:+83614027 | MS.gene069415:CDS |
CCAATCTGTTCAGAACCTCG+TGG | 0.714380 | 7.2:-83614042 | None:intergenic |
GATGTCTTGAAAATGGAATG+GGG | 0.730786 | 7.2:+83613707 | MS.gene069415:CDS |
GTGGCATTCAAAGTGAACCG+AGG | 0.739746 | 7.2:-83614023 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATTTAGAAAATTATCTTT+TGG | + | chr7.2:83614828-83614847 | MS.gene069415:CDS | 15.0% |
!! | GATATGTTATGAATTATCTT+CGG | + | chr7.2:83614164-83614183 | MS.gene069415:CDS | 20.0% |
! | TATTGAAGATGTCTTGAAAA+TGG | + | chr7.2:83613700-83613719 | MS.gene069415:CDS | 25.0% |
! | TCAGGAGAAAATAATGAAAT+GGG | + | chr7.2:83613157-83613176 | MS.gene069415:CDS | 25.0% |
! | TTAAAGTGATTCAAGCTTAT+AGG | + | chr7.2:83614746-83614765 | MS.gene069415:CDS | 25.0% |
! | TTCAGGAGAAAATAATGAAA+TGG | + | chr7.2:83613156-83613175 | MS.gene069415:CDS | 25.0% |
!! | AAAGATCAAAAGATGGATTT+GGG | + | chr7.2:83613742-83613761 | MS.gene069415:CDS | 25.0% |
!! | TATCTTTTGGATTTCTTTGA+AGG | + | chr7.2:83614841-83614860 | MS.gene069415:CDS | 25.0% |
AAAGGAGGATGATATAGATA+AGG | + | chr7.2:83613070-83613089 | MS.gene069415:CDS | 30.0% | |
AAGATGTCTTGAAAATGGAA+TGG | + | chr7.2:83613705-83613724 | MS.gene069415:CDS | 30.0% | |
AAGCTTATACCATTGTTAGA+AGG | + | chr7.2:83613630-83613649 | MS.gene069415:CDS | 30.0% | |
AAGTGATGAAAAGAAGATTC+TGG | + | chr7.2:83612977-83612996 | MS.gene069415:CDS | 30.0% | |
AATGAACAAACACTCATCTA+AGG | - | chr7.2:83613660-83613679 | None:intergenic | 30.0% | |
AATGAACAACCTACATTACA+TGG | + | chr7.2:83614426-83614445 | MS.gene069415:CDS | 30.0% | |
AGAATTCGTATCAATTTCTC+GGG | - | chr7.2:83613935-83613954 | None:intergenic | 30.0% | |
AGATGTCTTGAAAATGGAAT+GGG | + | chr7.2:83613706-83613725 | MS.gene069415:CDS | 30.0% | |
AGATTTGCGGATTTCTATAT+CGG | + | chr7.2:83614723-83614742 | MS.gene069415:CDS | 30.0% | |
AGCTTATACCATTGTTAGAA+GGG | + | chr7.2:83613631-83613650 | MS.gene069415:CDS | 30.0% | |
AGTTGTTGCAAAATCCTATT+AGG | + | chr7.2:83614872-83614891 | MS.gene069415:CDS | 30.0% | |
ATCCTTAAGAAAGTTGAGAA+TGG | - | chr7.2:83614566-83614585 | None:intergenic | 30.0% | |
GAGAATTCGTATCAATTTCT+CGG | - | chr7.2:83613936-83613955 | None:intergenic | 30.0% | |
GTGTTTGTTCATTCTTGAAA+TGG | + | chr7.2:83613667-83613686 | MS.gene069415:CDS | 30.0% | |
TCTGAACTTAGGATCATATT+CGG | + | chr7.2:83614466-83614485 | MS.gene069415:CDS | 30.0% | |
TGACATCAATGCTTTGTATT+CGG | + | chr7.2:83613988-83614007 | MS.gene069415:CDS | 30.0% | |
TGGTTTCAAAGATCAAAAGA+TGG | + | chr7.2:83613735-83613754 | MS.gene069415:CDS | 30.0% | |
TGTCTCAAAAACTCTTCTAA+AGG | + | chr7.2:83614615-83614634 | MS.gene069415:CDS | 30.0% | |
TGTTCATTCTTGAAATGGAA+AGG | + | chr7.2:83613672-83613691 | MS.gene069415:CDS | 30.0% | |
TTCCATTCTCAACTTTCTTA+AGG | + | chr7.2:83614561-83614580 | MS.gene069415:CDS | 30.0% | |
! | AGAGTATAAGTTTTTGCAGA+GGG | + | chr7.2:83613304-83613323 | MS.gene069415:CDS | 30.0% |
! | ATTTTGCAGCTTCTGAATTT+TGG | + | chr7.2:83613881-83613900 | MS.gene069415:CDS | 30.0% |
! | CAAAGATCAAAAGATGGATT+TGG | + | chr7.2:83613741-83613760 | MS.gene069415:CDS | 30.0% |
!! | AAGAGTATAAGTTTTTGCAG+AGG | + | chr7.2:83613303-83613322 | MS.gene069415:CDS | 30.0% |
!! | GGCTTTGAAAATCTTTGTTA+GGG | + | chr7.2:83613763-83613782 | MS.gene069415:CDS | 30.0% |
!! | TGTCATTGATTTAGTTCATC+CGG | + | chr7.2:83613538-83613557 | MS.gene069415:CDS | 30.0% |
!!! | TTTTGGTGATGATTCATTTG+AGG | + | chr7.2:83613472-83613491 | MS.gene069415:CDS | 30.0% |
AAATACTCAGACGTTTCTTC+AGG | - | chr7.2:83613215-83613234 | None:intergenic | 35.0% | |
ACAAAACAAGCTTGACTAAC+AGG | - | chr7.2:83613842-83613861 | None:intergenic | 35.0% | |
ACATGGCTGAAAAGGTTAAA+GGG | + | chr7.2:83614443-83614462 | MS.gene069415:CDS | 35.0% | |
AGACATATTGTGATGGCTTT+AGG | + | chr7.2:83612936-83612955 | MS.gene069415:CDS | 35.0% | |
AGGAAGATCAATCGATGATT+TGG | + | chr7.2:83613180-83613199 | MS.gene069415:CDS | 35.0% | |
ATATTGATCGAGAAGTTGGA+AGG | + | chr7.2:83613257-83613276 | MS.gene069415:CDS | 35.0% | |
CAAGCTTATAGGACATTTGT+TGG | + | chr7.2:83614757-83614776 | MS.gene069415:CDS | 35.0% | |
CATGAACATACAAAGTGAGA+AGG | + | chr7.2:83613025-83613044 | MS.gene069415:CDS | 35.0% | |
CTCAACTTTCTTAAGGATGA+AGG | + | chr7.2:83614568-83614587 | MS.gene069415:CDS | 35.0% | |
CTTCTCACTTTGTATGTTCA+TGG | - | chr7.2:83613027-83613046 | None:intergenic | 35.0% | |
GATGTCTTGAAAATGGAATG+GGG | + | chr7.2:83613707-83613726 | MS.gene069415:CDS | 35.0% | |
GGAAGATCAATCGATGATTT+GGG | + | chr7.2:83613181-83613200 | MS.gene069415:CDS | 35.0% | |
GGAGAAAATAATGAAATGGG+AGG | + | chr7.2:83613160-83613179 | MS.gene069415:CDS | 35.0% | |
TACATGGCTGAAAAGGTTAA+AGG | + | chr7.2:83614442-83614461 | MS.gene069415:CDS | 35.0% | |
TCTGAAAGATCAAGAAGAAG+AGG | + | chr7.2:83614222-83614241 | MS.gene069415:CDS | 35.0% | |
TTCATAACATATCTCGCCAA+TGG | - | chr7.2:83614157-83614176 | None:intergenic | 35.0% | |
TTCTCTTCTCTTTCTAACTC+AGG | - | chr7.2:83612900-83612919 | None:intergenic | 35.0% | |
TTGGCTTCTGTTATCATCTT+CGG | - | chr7.2:83614284-83614303 | None:intergenic | 35.0% | |
TTTACAGGATTCAAACAGCT+TGG | + | chr7.2:83614674-83614693 | MS.gene069415:CDS | 35.0% | |
TTTATCTTGCAAGTGAAAGG+TGG | + | chr7.2:83613786-83613805 | MS.gene069415:CDS | 35.0% | |
TTTGGTGAAGCTATGTCTAT+TGG | + | chr7.2:83613899-83613918 | MS.gene069415:CDS | 35.0% | |
! | CAATCGATGATTTGGGATTT+GGG | + | chr7.2:83613188-83613207 | MS.gene069415:CDS | 35.0% |
! | CTTATAGGACATTTGTTGGA+AGG | + | chr7.2:83614761-83614780 | MS.gene069415:CDS | 35.0% |
! | GAAACTTCCAGTTGTGTTTT+CGG | - | chr7.2:83614504-83614523 | None:intergenic | 35.0% |
! | GACATATTGTGATGGCTTTA+GGG | + | chr7.2:83612937-83612956 | MS.gene069415:CDS | 35.0% |
! | GGGAATTCTTTTGTCTCTTT+TGG | + | chr7.2:83613455-83613474 | MS.gene069415:CDS | 35.0% |
! | TCAATCGATGATTTGGGATT+TGG | + | chr7.2:83613187-83613206 | MS.gene069415:CDS | 35.0% |
! | TGGCTTAGTGACCAAATTTT+CGG | + | chr7.2:83613806-83613825 | MS.gene069415:CDS | 35.0% |
! | TTTGAGACAGAATTTGAACC+AGG | - | chr7.2:83614604-83614623 | None:intergenic | 35.0% |
!! | GAATACAAAGCATTGATGTC+AGG | - | chr7.2:83613989-83614008 | None:intergenic | 35.0% |
!! | GGGCTTTGAAAATCTTTGTT+AGG | + | chr7.2:83613762-83613781 | MS.gene069415:CDS | 35.0% |
AAGTTACGAAGCTTCTACCT+CGG | + | chr7.2:83614640-83614659 | MS.gene069415:CDS | 40.0% | |
AATGGATCCGAAAACACAAC+TGG | + | chr7.2:83614494-83614513 | MS.gene069415:CDS | 40.0% | |
AGGTTAAAGGGTCTGAACTT+AGG | + | chr7.2:83614455-83614474 | MS.gene069415:CDS | 40.0% | |
ATACAAAGTGAGAAGGAGGA+GGG | + | chr7.2:83613032-83613051 | MS.gene069415:CDS | 40.0% | |
ATCAATGACATGCTCTTCAG+TGG | - | chr7.2:83613528-83613547 | None:intergenic | 40.0% | |
ATTCAGTGCTTCGCTGTAAT+CGG | - | chr7.2:83614197-83614216 | None:intergenic | 40.0% | |
CCAAGACTGAAGCAAATGAT+AGG | - | chr7.2:83614345-83614364 | None:intergenic | 40.0% | |
CCTACATTACATGGCTGAAA+AGG | + | chr7.2:83614435-83614454 | MS.gene069415:CDS | 40.0% | |
CCTATCATTTGCTTCAGTCT+TGG | + | chr7.2:83614342-83614361 | MS.gene069415:CDS | 40.0% | |
GAACATACAAAGTGAGAAGG+AGG | + | chr7.2:83613028-83613047 | MS.gene069415:CDS | 40.0% | |
GAGACATACTCAGGTTCAAA+AGG | - | chr7.2:83613404-83613423 | None:intergenic | 40.0% | |
GGAGGATGATATAGATAAGG+AGG | + | chr7.2:83613073-83613092 | MS.gene069415:CDS | 40.0% | |
GGCTTATAGTGTTCTTCAGA+CGG | + | chr7.2:83613325-83613344 | MS.gene069415:CDS | 40.0% | |
GGGTTTATCTTGCAAGTGAA+AGG | + | chr7.2:83613783-83613802 | MS.gene069415:CDS | 40.0% | |
GTTCAAAAGGTTGCCTATTC+TGG | - | chr7.2:83613391-83613410 | None:intergenic | 40.0% | |
TGAAATACGAGAGAGCTAGT+TGG | + | chr7.2:83614536-83614555 | MS.gene069415:CDS | 40.0% | |
TGATATAGATAAGGAGGACG+AGG | + | chr7.2:83613079-83613098 | MS.gene069415:CDS | 40.0% | |
TGCAGCAAGACATATTGTGA+TGG | + | chr7.2:83612929-83612948 | MS.gene069415:CDS | 40.0% | |
TTCGTATCAATTTCTCGGGT+TGG | - | chr7.2:83613931-83613950 | None:intergenic | 40.0% | |
! | AAGAAGATTCTGGCTGATCT+TGG | + | chr7.2:83612987-83613006 | MS.gene069415:CDS | 40.0% |
! | AGTGACCAAATTTTCGGAGA+AGG | + | chr7.2:83613812-83613831 | MS.gene069415:CDS | 40.0% |
! | CCTTTTCAGCCATGTAATGT+AGG | - | chr7.2:83614438-83614457 | None:intergenic | 40.0% |
! | GAAAATGGAATGGGGTACTT+TGG | + | chr7.2:83613715-83613734 | MS.gene069415:CDS | 40.0% |
! | TAAGGCATCCCTTCTAACAA+TGG | - | chr7.2:83613642-83613661 | None:intergenic | 40.0% |
!! | ACAACGACTTGGTTTGATTC+AGG | + | chr7.2:83613139-83613158 | MS.gene069415:CDS | 40.0% |
!! | GGTGTTATTGAACAACGACT+TGG | + | chr7.2:83613128-83613147 | MS.gene069415:CDS | 40.0% |
AGCGAGGAAGATGTTGTTGA+TGG | + | chr7.2:83613434-83613453 | MS.gene069415:CDS | 45.0% | |
AGTCTTGGAGAACAATCTCG+AGG | + | chr7.2:83614357-83614376 | MS.gene069415:CDS | 45.0% | |
CAATGCTTTGTATTCGGACG+AGG | + | chr7.2:83613994-83614013 | MS.gene069415:CDS | 45.0% | |
CATACAAAGTGAGAAGGAGG+AGG | + | chr7.2:83613031-83613050 | MS.gene069415:CDS | 45.0% | |
CTGTTATCATCTTCGGTACC+CGG | - | chr7.2:83614277-83614296 | None:intergenic | 45.0% | |
GAAATCTACCAGGAGATGCT+TGG | - | chr7.2:83614303-83614322 | None:intergenic | 45.0% | |
GATCGAAACGAGACATACTC+AGG | - | chr7.2:83613413-83613432 | None:intergenic | 45.0% | |
GCAACCTGCTTATCCAGAAT+AGG | + | chr7.2:83613375-83613394 | MS.gene069415:CDS | 45.0% | |
GCGAGGAAGATGTTGTTGAT+GGG | + | chr7.2:83613435-83613454 | MS.gene069415:CDS | 45.0% | |
GCGCATATTGATCGAGAAGT+TGG | + | chr7.2:83613253-83613272 | MS.gene069415:CDS | 45.0% | |
GGATCATATTCGGAGACGAA+TGG | + | chr7.2:83614476-83614495 | MS.gene069415:CDS | 45.0% | |
GTTCGCCTTCTCCGAAAATT+TGG | - | chr7.2:83613820-83613839 | None:intergenic | 45.0% | |
GTTGCCTATTCTGGATAAGC+AGG | - | chr7.2:83613382-83613401 | None:intergenic | 45.0% | |
TACAAAGTGAGAAGGAGGAG+GGG | + | chr7.2:83613033-83613052 | MS.gene069415:CDS | 45.0% | |
TATAGATAAGGAGGACGAGG+TGG | + | chr7.2:83613082-83613101 | MS.gene069415:CDS | 45.0% | |
TCAACAACGCCTTTAGTTGG+TGG | + | chr7.2:83614121-83614140 | MS.gene069415:CDS | 45.0% | |
TCCTGGTAGATTTCCCTCAA+TGG | + | chr7.2:83614309-83614328 | MS.gene069415:CDS | 45.0% | |
TCGGCTTCGAGGATATTTAC+AGG | + | chr7.2:83614659-83614678 | MS.gene069415:CDS | 45.0% | |
TGTAAATATCCTCGAAGCCG+AGG | - | chr7.2:83614660-83614679 | None:intergenic | 45.0% | |
TGTATCCCTCCACCAACTAA+AGG | - | chr7.2:83614133-83614152 | None:intergenic | 45.0% | |
TTCAGCTTCGCGAAGATTTG+CGG | + | chr7.2:83614710-83614729 | MS.gene069415:CDS | 45.0% | |
TTCTTCAGACGGCTATGACA+CGG | + | chr7.2:83613336-83613355 | MS.gene069415:CDS | 45.0% | |
TTTGCGATACACCTGAGATC+AGG | - | chr7.2:83613572-83613591 | None:intergenic | 45.0% | |
!! | ATCAATTTCTCGGGTTGGTG+AGG | - | chr7.2:83613926-83613945 | None:intergenic | 45.0% |
!! | CACGAGGTTCTGAACAGATT+GGG | + | chr7.2:83614043-83614062 | MS.gene069415:CDS | 45.0% |
!! | CCAACTAAAGGCGTTGTTGA+CGG | - | chr7.2:83614121-83614140 | None:intergenic | 45.0% |
AACAGAAGCCAAGCATCTCC+TGG | + | chr7.2:83614292-83614311 | MS.gene069415:CDS | 50.0% | |
AGAAGGAGGAGGGGAAGATA+GGG | + | chr7.2:83613042-83613061 | MS.gene069415:CDS | 50.0% | |
CCAATCTGTTCAGAACCTCG+TGG | - | chr7.2:83614045-83614064 | None:intergenic | 50.0% | |
CCGTCAACAACGCCTTTAGT+TGG | + | chr7.2:83614118-83614137 | MS.gene069415:CDS | 50.0% | |
CGTGTCAGGTGACGATGAAA+TGG | - | chr7.2:83614251-83614270 | None:intergenic | 50.0% | |
CTGAGATCAGGAATCACAGC+CGG | - | chr7.2:83613560-83613579 | None:intergenic | 50.0% | |
GAAGATAGGGAGGGAAAAGG+AGG | + | chr7.2:83613055-83613074 | MS.gene069415:CDS | 50.0% | |
GATGAAGGAATTCACGCTCC+TGG | + | chr7.2:83614583-83614602 | MS.gene069415:CDS | 50.0% | |
GCCATTGAGGGAAATCTACC+AGG | - | chr7.2:83614313-83614332 | None:intergenic | 50.0% | |
GCTTTGTATTCGGACGAGGT+TGG | + | chr7.2:83613998-83614017 | MS.gene069415:CDS | 50.0% | |
GGTTCACTTTGAATGCCACG+AGG | + | chr7.2:83614027-83614046 | MS.gene069415:CDS | 50.0% | |
GTAGATTTCCCTCAATGGCG+CGG | + | chr7.2:83614314-83614333 | MS.gene069415:CDS | 50.0% | |
GTGGCATTCAAAGTGAACCG+AGG | - | chr7.2:83614026-83614045 | None:intergenic | 50.0% | |
TCTTCGCGAAGCTGAACATC+TGG | - | chr7.2:83614706-83614725 | None:intergenic | 50.0% | |
TGGTGGAGGGATACATCCAT+TGG | + | chr7.2:83614138-83614157 | MS.gene069415:CDS | 50.0% | |
!! | ACAACGCCTTTAGTTGGTGG+AGG | + | chr7.2:83614124-83614143 | MS.gene069415:CDS | 50.0% |
!! | CAACGCCTTTAGTTGGTGGA+GGG | + | chr7.2:83614125-83614144 | MS.gene069415:CDS | 50.0% |
!! | CCACGAGGTTCTGAACAGAT+TGG | + | chr7.2:83614042-83614061 | MS.gene069415:CDS | 50.0% |
AAGCTTCTACCTCGGCTTCG+AGG | + | chr7.2:83614648-83614667 | MS.gene069415:CDS | 55.0% | |
AGGAATTGCCGCGCCATTGA+GGG | - | chr7.2:83614325-83614344 | None:intergenic | 55.0% | |
ATCGTCACCTGACACGAGTC+CGG | + | chr7.2:83614255-83614274 | MS.gene069415:CDS | 55.0% | |
CGGCTGTGATTCCTGATCTC+AGG | + | chr7.2:83613558-83613577 | MS.gene069415:CDS | 55.0% | |
GAGAAGGAGGAGGGGAAGAT+AGG | + | chr7.2:83613041-83613060 | MS.gene069415:CDS | 55.0% | |
GGGGAAGATAGGGAGGGAAA+AGG | + | chr7.2:83613052-83613071 | MS.gene069415:CDS | 55.0% | |
TAGGAATTGCCGCGCCATTG+AGG | - | chr7.2:83614326-83614345 | None:intergenic | 55.0% | |
TGTCTCGTTTCGATCGAGCG+AGG | + | chr7.2:83613418-83613437 | MS.gene069415:CDS | 55.0% | |
! | GAGGAGGAGGAAGAAGGTGT+TGG | + | chr7.2:83613107-83613126 | MS.gene069415:CDS | 55.0% |
! | TTCGGACGAGGTTGGTTCCT+CGG | + | chr7.2:83614006-83614025 | MS.gene069415:CDS | 55.0% |
AGGAGGAGGGGAAGATAGGG+AGG | + | chr7.2:83613045-83613064 | MS.gene069415:CDS | 60.0% | |
GGAGGAGGGGAAGATAGGGA+GGG | + | chr7.2:83613046-83613065 | MS.gene069415:CDS | 60.0% | |
GTGGACGAGGAGGAGGAAGA+AGG | + | chr7.2:83613101-83613120 | MS.gene069415:CDS | 60.0% | |
TAAGGAGGACGAGGTGGACG+AGG | + | chr7.2:83613088-83613107 | MS.gene069415:CDS | 60.0% | |
TCGTCACCTGACACGAGTCC+GGG | + | chr7.2:83614256-83614275 | MS.gene069415:CDS | 60.0% | |
TCGGTACCCGGACTCGTGTC+AGG | - | chr7.2:83614265-83614284 | None:intergenic | 65.0% | |
GGACGAGGTGGACGAGGAGG+AGG | + | chr7.2:83613094-83613113 | MS.gene069415:CDS | 70.0% | |
GGAGGACGAGGTGGACGAGG+AGG | + | chr7.2:83613091-83613110 | MS.gene069415:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 83612867 | 83614900 | 83612867 | ID=MS.gene069415 |
chr7.2 | mRNA | 83612867 | 83614900 | 83612867 | ID=MS.gene069415.t1;Parent=MS.gene069415 |
chr7.2 | exon | 83612867 | 83614900 | 83612867 | ID=MS.gene069415.t1.exon1;Parent=MS.gene069415.t1 |
chr7.2 | CDS | 83612867 | 83614900 | 83612867 | ID=cds.MS.gene069415.t1;Parent=MS.gene069415.t1 |
Gene Sequence |
Protein sequence |