Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61202.t1 | XP_013465529.1 | 88 | 510 | 46 | 3 | 1 | 509 | 1 | 496 | 4.80E-156 | 561.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61202.t1 | Q9LJG8 | 46.2 | 93 | 46 | 2 | 288 | 377 | 84 | 175 | 9.0e-18 | 93.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61202.t1 | A0A072VC01 | 88.0 | 510 | 46 | 3 | 1 | 509 | 1 | 496 | 3.5e-156 | 561.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene61202.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene61202 | 0.862627 | 4.43E-64 | -1.69E-46 |
| MS.gene049159 | MS.gene61202 | 0.809622 | 1.73E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene61202 | 0.826463 | 2.68E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene61202 | 0.801718 | 7.89E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene61202 | 0.800073 | 1.71E-48 | -1.69E-46 |
| MS.gene049350 | MS.gene61202 | 0.815036 | 1.14E-51 | -1.69E-46 |
| MS.gene049368 | MS.gene61202 | 0.829039 | 6.43E-55 | -1.69E-46 |
| MS.gene049452 | MS.gene61202 | 0.821027 | 5.02E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene61202 | 0.842469 | 2.54E-58 | -1.69E-46 |
| MS.gene049711 | MS.gene61202 | 0.810304 | 1.23E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene61202 | 0.854105 | 1.54E-61 | -1.69E-46 |
| MS.gene050026 | MS.gene61202 | 0.803199 | 3.91E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene61202 | 0.80277 | 4.79E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene61202 | 0.842292 | 2.83E-58 | -1.69E-46 |
| MS.gene050737 | MS.gene61202 | 0.848638 | 5.39E-60 | -1.69E-46 |
| MS.gene050759 | MS.gene61202 | 0.816834 | 4.51E-52 | -1.69E-46 |
| MS.gene050826 | MS.gene61202 | 0.819078 | 1.40E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene61202 | 0.864077 | 1.58E-64 | -1.69E-46 |
| MS.gene050962 | MS.gene61202 | 0.804812 | 1.81E-49 | -1.69E-46 |
| MS.gene051147 | MS.gene61202 | 0.834496 | 2.90E-56 | -1.69E-46 |
| MS.gene051198 | MS.gene61202 | 0.82227 | 2.59E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene61202 | 0.801801 | 7.58E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene61202 | 0.802457 | 5.56E-49 | -1.69E-46 |
| MS.gene051490 | MS.gene61202 | 0.822019 | 2.96E-53 | -1.69E-46 |
| MS.gene051541 | MS.gene61202 | 0.801594 | 8.36E-49 | -1.69E-46 |
| MS.gene051800 | MS.gene61202 | 0.833827 | 4.26E-56 | -1.69E-46 |
| MS.gene052016 | MS.gene61202 | 0.826504 | 2.62E-54 | -1.69E-46 |
| MS.gene052052 | MS.gene61202 | 0.801568 | 8.47E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene61202 | 0.809097 | 2.24E-50 | -1.69E-46 |
| MS.gene052342 | MS.gene61202 | 0.805784 | 1.13E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene61202 | 0.867058 | 1.81E-65 | -1.69E-46 |
| MS.gene052493 | MS.gene61202 | 0.829951 | 3.86E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene61202 | 0.841606 | 4.29E-58 | -1.69E-46 |
| MS.gene052518 | MS.gene61202 | 0.809773 | 1.60E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene61202 | 0.819838 | 9.41E-53 | -1.69E-46 |
| MS.gene052534 | MS.gene61202 | 0.812816 | 3.51E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene61202 | 0.820767 | 5.76E-53 | -1.69E-46 |
| MS.gene052675 | MS.gene61202 | 0.818117 | 2.32E-52 | -1.69E-46 |
| MS.gene052677 | MS.gene61202 | 0.82209 | 2.85E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene61202 | 0.823886 | 1.09E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene61202 | 0.802663 | 5.04E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene61202 | 0.814589 | 1.43E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene61202 | 0.811056 | 8.47E-51 | -1.69E-46 |
| MS.gene05350 | MS.gene61202 | 0.83455 | 2.81E-56 | -1.69E-46 |
| MS.gene053621 | MS.gene61202 | 0.801864 | 7.36E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene61202 | 0.801125 | 1.04E-48 | -1.69E-46 |
| MS.gene054236 | MS.gene61202 | 0.823441 | 1.38E-53 | -1.69E-46 |
| MS.gene05423 | MS.gene61202 | 0.822026 | 2.95E-53 | -1.69E-46 |
| MS.gene054479 | MS.gene61202 | 0.845512 | 3.88E-59 | -1.69E-46 |
| MS.gene054489 | MS.gene61202 | 0.813322 | 2.71E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene61202 | 0.837678 | 4.51E-57 | -1.69E-46 |
| MS.gene054641 | MS.gene61202 | 0.83725 | 5.81E-57 | -1.69E-46 |
| MS.gene054651 | MS.gene61202 | 0.835362 | 1.75E-56 | -1.69E-46 |
| MS.gene054775 | MS.gene61202 | 0.819799 | 9.61E-53 | -1.69E-46 |
| MS.gene054875 | MS.gene61202 | 0.810983 | 8.79E-51 | -1.69E-46 |
| MS.gene054892 | MS.gene61202 | 0.807552 | 4.78E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene61202 | 0.806377 | 8.47E-50 | -1.69E-46 |
| MS.gene054991 | MS.gene61202 | 0.828479 | 8.79E-55 | -1.69E-46 |
| MS.gene05517 | MS.gene61202 | 0.800361 | 1.49E-48 | -1.69E-46 |
| MS.gene055228 | MS.gene61202 | 0.812055 | 5.14E-51 | -1.69E-46 |
| MS.gene055327 | MS.gene61202 | 0.809541 | 1.80E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene61202 | 0.821387 | 4.15E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene61202 | 0.825116 | 5.59E-54 | -1.69E-46 |
| MS.gene055468 | MS.gene61202 | 0.821288 | 4.37E-53 | -1.69E-46 |
| MS.gene055469 | MS.gene61202 | 0.803847 | 2.87E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene61202 | 0.845305 | 4.41E-59 | -1.69E-46 |
| MS.gene05552 | MS.gene61202 | 0.809812 | 1.57E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene61202 | 0.823798 | 1.14E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene61202 | 0.858246 | 9.40E-63 | -1.69E-46 |
| MS.gene055926 | MS.gene61202 | 0.834921 | 2.27E-56 | -1.69E-46 |
| MS.gene056162 | MS.gene61202 | 0.809071 | 2.27E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene61202 | 0.847686 | 9.88E-60 | -1.69E-46 |
| MS.gene056308 | MS.gene61202 | 0.829965 | 3.83E-55 | -1.69E-46 |
| MS.gene056480 | MS.gene61202 | 0.801442 | 8.99E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene61202 | 0.824887 | 6.33E-54 | -1.69E-46 |
| MS.gene056699 | MS.gene61202 | 0.825546 | 4.42E-54 | -1.69E-46 |
| MS.gene056776 | MS.gene61202 | 0.827907 | 1.21E-54 | -1.69E-46 |
| MS.gene056779 | MS.gene61202 | 0.806448 | 8.19E-50 | -1.69E-46 |
| MS.gene056831 | MS.gene61202 | 0.808812 | 2.58E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene61202 | 0.825476 | 4.59E-54 | -1.69E-46 |
| MS.gene05690 | MS.gene61202 | 0.837989 | 3.75E-57 | -1.69E-46 |
| MS.gene057034 | MS.gene61202 | 0.819666 | 1.03E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene61202 | 0.814241 | 1.70E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene61202 | 0.813246 | 2.82E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene61202 | 0.80387 | 2.84E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene61202 | 0.812656 | 3.80E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene61202 | 0.829593 | 4.72E-55 | -1.69E-46 |
| MS.gene058081 | MS.gene61202 | 0.856916 | 2.33E-62 | -1.69E-46 |
| MS.gene058159 | MS.gene61202 | 0.808092 | 3.67E-50 | -1.69E-46 |
| MS.gene058339 | MS.gene61202 | 0.801722 | 7.87E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene61202 | 0.82039 | 7.03E-53 | -1.69E-46 |
| MS.gene058429 | MS.gene61202 | 0.820979 | 5.15E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene61202 | 0.80998 | 1.45E-50 | -1.69E-46 |
| MS.gene058647 | MS.gene61202 | 0.820726 | 5.89E-53 | -1.69E-46 |
| MS.gene058781 | MS.gene61202 | 0.820481 | 6.71E-53 | -1.69E-46 |
| MS.gene058783 | MS.gene61202 | 0.82743 | 1.57E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene61202 | 0.810326 | 1.22E-50 | -1.69E-46 |
| MS.gene05897 | MS.gene61202 | 0.833439 | 5.33E-56 | -1.69E-46 |
| MS.gene059170 | MS.gene61202 | 0.849737 | 2.67E-60 | -1.69E-46 |
| MS.gene059283 | MS.gene61202 | 0.859901 | 3.00E-63 | -1.69E-46 |
| MS.gene059438 | MS.gene61202 | 0.810844 | 9.42E-51 | -1.69E-46 |
| MS.gene059439 | MS.gene61202 | 0.838141 | 3.43E-57 | -1.69E-46 |
| MS.gene059440 | MS.gene61202 | 0.816145 | 6.43E-52 | -1.69E-46 |
| MS.gene059570 | MS.gene61202 | 0.83041 | 2.98E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene61202 | 0.80351 | 3.37E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene61202 | 0.831918 | 1.27E-55 | -1.69E-46 |
| MS.gene059952 | MS.gene61202 | 0.826419 | 2.74E-54 | -1.69E-46 |
| MS.gene060011 | MS.gene61202 | 0.816522 | 5.29E-52 | -1.69E-46 |
| MS.gene060167 | MS.gene61202 | 0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene61202 | 0.805174 | 1.52E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene61202 | 0.81374 | 2.20E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene61202 | 0.850895 | 1.26E-60 | -1.69E-46 |
| MS.gene060520 | MS.gene61202 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene61202 | 0.881795 | 1.78E-70 | -1.69E-46 |
| MS.gene060637 | MS.gene61202 | 0.803222 | 3.86E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene61202 | 0.818987 | 1.47E-52 | -1.69E-46 |
| MS.gene060802 | MS.gene61202 | 0.805537 | 1.27E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene61202 | 0.86699 | 1.90E-65 | -1.69E-46 |
| MS.gene060935 | MS.gene61202 | 0.815721 | 7.99E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene61202 | 0.819447 | 1.16E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene61202 | 0.831956 | 1.24E-55 | -1.69E-46 |
| MS.gene061160 | MS.gene61202 | 0.801261 | 9.79E-49 | -1.69E-46 |
| MS.gene061188 | MS.gene61202 | 0.809883 | 1.52E-50 | -1.69E-46 |
| MS.gene06121 | MS.gene61202 | 0.813354 | 2.67E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61202.t1 | MTR_2g102227 | 84.064 | 502 | 61 | 5 | 11 | 509 | 11 | 496 | 0.0 | 712 |
| MS.gene61202.t1 | MTR_6g486270 | 52.252 | 222 | 101 | 3 | 287 | 505 | 129 | 348 | 7.54e-60 | 202 |
| MS.gene61202.t1 | MTR_8g022290 | 28.664 | 307 | 142 | 10 | 267 | 505 | 37 | 334 | 1.25e-20 | 94.0 |
| MS.gene61202.t1 | MTR_4g079960 | 43.617 | 94 | 47 | 2 | 288 | 375 | 31 | 124 | 9.86e-16 | 78.6 |
| MS.gene61202.t1 | MTR_4g079960 | 43.617 | 94 | 47 | 2 | 288 | 375 | 31 | 124 | 1.20e-15 | 78.2 |
| MS.gene61202.t1 | MTR_4g079960 | 43.617 | 94 | 47 | 2 | 288 | 375 | 31 | 124 | 1.92e-15 | 77.8 |
| MS.gene61202.t1 | MTR_2g016140 | 39.785 | 93 | 51 | 2 | 288 | 375 | 23 | 115 | 3.38e-15 | 77.0 |
| MS.gene61202.t1 | MTR_2g016140 | 39.785 | 93 | 51 | 2 | 288 | 375 | 23 | 115 | 5.39e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61202.t1 | AT3G24490 | 42.912 | 261 | 129 | 4 | 250 | 509 | 65 | 306 | 1.57e-58 | 197 |
| MS.gene61202.t1 | AT3G14180 | 42.857 | 105 | 53 | 3 | 288 | 389 | 84 | 184 | 3.29e-22 | 99.8 |
| MS.gene61202.t1 | AT1G54060 | 32.031 | 256 | 130 | 8 | 288 | 501 | 94 | 347 | 1.27e-18 | 88.2 |
| MS.gene61202.t1 | AT3G11100 | 33.028 | 218 | 136 | 3 | 288 | 501 | 22 | 233 | 1.26e-17 | 82.8 |
| MS.gene61202.t1 | AT3G58630 | 37.255 | 102 | 50 | 2 | 288 | 375 | 26 | 127 | 1.69e-15 | 77.8 |
| MS.gene61202.t1 | AT3G58630 | 37.255 | 102 | 50 | 2 | 288 | 375 | 26 | 127 | 2.10e-15 | 77.8 |
| MS.gene61202.t1 | AT5G05550 | 28.814 | 236 | 129 | 5 | 288 | 507 | 24 | 236 | 3.25e-15 | 75.9 |
| MS.gene61202.t1 | AT5G05550 | 30.396 | 227 | 137 | 6 | 288 | 507 | 24 | 236 | 5.98e-15 | 75.1 |
| MS.gene61202.t1 | AT5G05550 | 30.396 | 227 | 137 | 6 | 288 | 507 | 24 | 236 | 9.48e-15 | 74.7 |
| MS.gene61202.t1 | AT3G10030 | 35.556 | 90 | 57 | 1 | 287 | 375 | 160 | 249 | 1.82e-13 | 73.2 |
| MS.gene61202.t1 | AT3G10030 | 35.556 | 90 | 57 | 1 | 287 | 375 | 160 | 249 | 2.57e-13 | 72.8 |
| MS.gene61202.t1 | AT3G24860 | 29.921 | 127 | 79 | 3 | 271 | 391 | 48 | 170 | 1.20e-11 | 66.2 |
Find 130 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGATTCCATTCAGAATTT+TGG | 0.118439 | 2.1:-3290637 | MS.gene61202:CDS |
| CGTCTTCATCCACCTGCTTT+AGG | 0.171389 | 2.1:+3291643 | None:intergenic |
| CTTCTTCATCAGCATGCTTT+AGG | 0.195850 | 2.1:+3291412 | None:intergenic |
| CAAGATTAAGTTTCAAGATA+TGG | 0.238032 | 2.1:-3290935 | MS.gene61202:CDS |
| TTGCCATACCCTTGATTGTT+AGG | 0.257577 | 2.1:+3291924 | None:intergenic |
| TTCCCAAATGGCTGGGAATA+TGG | 0.258167 | 2.1:+3291540 | None:intergenic |
| TTCTTCATCAGCATGCTTTA+GGG | 0.275731 | 2.1:+3291413 | None:intergenic |
| GCAGCTGCTAAACGATCTTT+TGG | 0.284124 | 2.1:-3291171 | MS.gene61202:CDS |
| GTCTTCATCCACCTGCTTTA+GGG | 0.285453 | 2.1:+3291644 | None:intergenic |
| TGGGTGGTGGAGATAGAAAA+TGG | 0.290828 | 2.1:-3290915 | MS.gene61202:CDS |
| CATTTGTTCTTCTTGATGCT+TGG | 0.296454 | 2.1:-3291110 | MS.gene61202:CDS |
| ATTTGTTCTTCTTGATGCTT+GGG | 0.319429 | 2.1:-3291109 | MS.gene61202:CDS |
| AGAAGATTGAAAATAATAAA+AGG | 0.319723 | 2.1:-3290603 | MS.gene61202:CDS |
| ACAGAATCGGTTCGTGTAGA+AGG | 0.331232 | 2.1:-3290733 | MS.gene61202:CDS |
| TCTCCATATTCCCAGCCATT+TGG | 0.360453 | 2.1:-3291543 | MS.gene61202:CDS |
| GATGGATTTCCTCAACGATT+TGG | 0.369450 | 2.1:-3290551 | MS.gene61202:CDS |
| CTCCATATTCCCAGCCATTT+GGG | 0.375943 | 2.1:-3291542 | MS.gene61202:CDS |
| AGAAGATGAAGAGCGGTTAG+TGG | 0.381730 | 2.1:-3291487 | MS.gene61202:CDS |
| ACCAACACCATATGGGTTAG+AGG | 0.383815 | 2.1:+3291950 | None:intergenic |
| TTCTTGATGCTTGGGGTGAT+CGG | 0.409344 | 2.1:-3291101 | MS.gene61202:CDS |
| TTAGGATAACCAACACCATA+TGG | 0.412870 | 2.1:+3291942 | None:intergenic |
| TACCTTCATTCCCAAATGGC+TGG | 0.417617 | 2.1:+3291532 | None:intergenic |
| GACCGACAAAGCGAGGAATA+TGG | 0.421493 | 2.1:-3291591 | MS.gene61202:CDS |
| ATCGGTTTCTGCAACATAGA+AGG | 0.423435 | 2.1:-3291083 | MS.gene61202:CDS |
| AAGATTAAGTTTCAAGATAT+GGG | 0.423794 | 2.1:-3290934 | MS.gene61202:CDS |
| AACTTATGAATTTGCAGCTC+GGG | 0.427130 | 2.1:-3291211 | MS.gene61202:CDS |
| TCCCAGCCATTTGGGAATGA+AGG | 0.432109 | 2.1:-3291534 | MS.gene61202:CDS |
| AACCATATTCCTCGCTTTGT+CGG | 0.453074 | 2.1:+3291589 | None:intergenic |
| ATGGCAACAAGTTGCAGAAA+AGG | 0.453580 | 2.1:-3291040 | MS.gene61202:CDS |
| GCAATCTCAAACACCCTTTG+AGG | 0.460478 | 2.1:-3291905 | MS.gene61202:CDS |
| TAATAAAAGGCAGCAGATGA+TGG | 0.461717 | 2.1:-3290590 | MS.gene61202:CDS |
| GTTTCAAAAGTTGAAAGAAC+GGG | 0.463936 | 2.1:-3291009 | MS.gene61202:CDS |
| GGGTGGTGGAGATAGAAAAT+GGG | 0.465027 | 2.1:-3290914 | MS.gene61202:CDS |
| GTTGGTTATCCTAACAATCA+AGG | 0.472688 | 2.1:-3291933 | MS.gene61202:CDS |
| AAAATGTTGACGACGAGGAT+GGG | 0.474465 | 2.1:-3291359 | MS.gene61202:CDS |
| CATCACCGTTCCCTCCTAAC+CGG | 0.475969 | 2.1:+3291748 | None:intergenic |
| TTGACGACGAGGATGGGGAT+AGG | 0.478859 | 2.1:-3291353 | MS.gene61202:CDS |
| CCTTCTCAGTCCATTCAGTA+AGG | 0.479775 | 2.1:+3291136 | None:intergenic |
| GCAGCTGCAGCTGACGGTGT+TGG | 0.482446 | 2.1:+3291186 | None:intergenic |
| TTAGGAATTCCCTTACTGAA+TGG | 0.483595 | 2.1:-3291146 | MS.gene61202:CDS |
| TTGTTACCTTCATTCCCAAA+TGG | 0.485652 | 2.1:+3291528 | None:intergenic |
| CATCATCATTCCCTCCTATC+CGG | 0.487334 | 2.1:+3291709 | None:intergenic |
| GGAATCAGCAAGTAATTTGA+AGG | 0.488399 | 2.1:+3290651 | None:intergenic |
| GCAATGACGAGGATGGGGAT+AGG | 0.488482 | 2.1:-3291386 | MS.gene61202:CDS |
| CGGGTAGATTCATTTGCAGC+TGG | 0.491062 | 2.1:+3291864 | None:intergenic |
| TAATTCATCTTCATTCATCA+TGG | 0.493258 | 2.1:+3291275 | None:intergenic |
| CAATGACGAGGATGGGGATA+GGG | 0.494589 | 2.1:-3291385 | MS.gene61202:CDS |
| CATCGACATGATCATAATCT+CGG | 0.496049 | 2.1:+3291844 | None:intergenic |
| TATCTTACCAAAATTCTGAA+TGG | 0.497261 | 2.1:+3290630 | None:intergenic |
| TAGATTCATTTGCAGCTGGA+TGG | 0.497620 | 2.1:+3291868 | None:intergenic |
| ACCTTCATTCCCAAATGGCT+GGG | 0.497851 | 2.1:+3291533 | None:intergenic |
| TCCTCCTGAAAATACAGAAT+CGG | 0.498451 | 2.1:-3290746 | MS.gene61202:CDS |
| AGGTATCCCTCTAACCCATA+TGG | 0.502976 | 2.1:-3291957 | MS.gene61202:CDS |
| GCATGATTTACATAAACTCC+AGG | 0.504047 | 2.1:+3290796 | None:intergenic |
| AGATTCATTTGCAGCTGGAT+GGG | 0.504646 | 2.1:+3291869 | None:intergenic |
| TATCCTAACAATCAAGGGTA+TGG | 0.505306 | 2.1:-3291927 | MS.gene61202:CDS |
| GAAAATGTTGACGACGAGGA+TGG | 0.512898 | 2.1:-3291360 | MS.gene61202:CDS |
| AAGATAGCAATGACGAGGAT+GGG | 0.513429 | 2.1:-3291392 | MS.gene61202:CDS |
| CAAAGAAAAGAAGGAAAGGA+AGG | 0.514012 | 2.1:-3290693 | MS.gene61202:CDS |
| GAAGATAGCAATGACGAGGA+TGG | 0.518876 | 2.1:-3291393 | MS.gene61202:CDS |
| GGCCTTGCCCAAAGAAAAGA+AGG | 0.520654 | 2.1:-3290702 | MS.gene61202:CDS |
| GACGATGAAGATCGGTTAGG+AGG | 0.521555 | 2.1:-3291798 | MS.gene61202:CDS |
| TGACGACGAGGATGGGGATA+GGG | 0.523050 | 2.1:-3291352 | MS.gene61202:CDS |
| AATATGAAGAATTCCTCAAA+GGG | 0.523799 | 2.1:+3291892 | None:intergenic |
| AAGTTTCAAGATATGGGTGG+TGG | 0.524195 | 2.1:-3290928 | MS.gene61202:CDS |
| TAGGATAACCAACACCATAT+GGG | 0.528470 | 2.1:+3291943 | None:intergenic |
| TCTCTTGAGTTCGAACGACA+AGG | 0.531751 | 2.1:+3290835 | None:intergenic |
| CCCTCTAACCCATATGGTGT+TGG | 0.531952 | 2.1:-3291951 | MS.gene61202:CDS |
| GGAACTAGAAAAGATGAGGA+TGG | 0.544427 | 2.1:-3290569 | MS.gene61202:CDS |
| AGATGAAGAGCGGTTAGTGG+AGG | 0.544899 | 2.1:-3291484 | MS.gene61202:CDS |
| AAATGTTGACGACGAGGATG+GGG | 0.548278 | 2.1:-3291358 | MS.gene61202:CDS |
| GGGAGTCTTGCTTGTTGTGG+TGG | 0.550724 | 2.1:+3290856 | None:intergenic |
| GTCGATGATGAAGATCAGTT+AGG | 0.550883 | 2.1:-3291828 | MS.gene61202:CDS |
| AAAGAAAAGAAGGAAAGGAA+GGG | 0.551393 | 2.1:-3290692 | MS.gene61202:CDS |
| GTTGATGAAGACCGGTTAGG+AGG | 0.553914 | 2.1:-3291759 | MS.gene61202:CDS |
| TTTGTTCTTCTTGATGCTTG+GGG | 0.554775 | 2.1:-3291108 | MS.gene61202:CDS |
| AAGAAAAGAAGGAAAGGAAG+GGG | 0.556042 | 2.1:-3290691 | MS.gene61202:CDS |
| GTTCGTGTAGAAGGTTTCGA+AGG | 0.557020 | 2.1:-3290724 | MS.gene61202:CDS |
| AGATAGCAATGACGAGGATG+GGG | 0.557142 | 2.1:-3291391 | MS.gene61202:CDS |
| ATCGACATGATCATAATCTC+GGG | 0.559195 | 2.1:+3291845 | None:intergenic |
| GTTGATGAAGACCGGATAGG+AGG | 0.559685 | 2.1:-3291720 | MS.gene61202:CDS |
| CCAACACCATATGGGTTAGA+GGG | 0.561593 | 2.1:+3291951 | None:intergenic |
| CGGTGATAATGACAAGAAGC+AGG | 0.561989 | 2.1:-3291307 | MS.gene61202:CDS |
| CGTTTAGCAGCTGCAGCTGA+CGG | 0.562335 | 2.1:+3291180 | None:intergenic |
| ATGATGTTGTTGATGAAGAC+CGG | 0.562727 | 2.1:-3291767 | MS.gene61202:CDS |
| CTCTTGAGTTCGAACGACAA+GGG | 0.566224 | 2.1:+3290836 | None:intergenic |
| TGATCATCATTCCCTAAAGC+AGG | 0.566741 | 2.1:-3291655 | MS.gene61202:CDS |
| GATGATGAAGATCAGTTAGG+AGG | 0.571101 | 2.1:-3291825 | MS.gene61202:CDS |
| GGTTTCAAAAGTTGAAAGAA+CGG | 0.571460 | 2.1:-3291010 | MS.gene61202:CDS |
| AATGACGATGAAGATCGGTT+AGG | 0.571987 | 2.1:-3291801 | MS.gene61202:CDS |
| AGGATGAAGAAGATGAAGAG+CGG | 0.572202 | 2.1:-3291494 | MS.gene61202:CDS |
| GTTGTTGATGAAGACCGGTT+AGG | 0.573185 | 2.1:-3291762 | MS.gene61202:CDS |
| TGTAAATCATGCAAATGAGA+TGG | 0.574988 | 2.1:-3290785 | MS.gene61202:CDS |
| ATGAAGACGATGACACCGAT+GGG | 0.578930 | 2.1:-3291629 | MS.gene61202:CDS |
| GATGAAGACGATGACACCGA+TGG | 0.583172 | 2.1:-3291630 | MS.gene61202:CDS |
| ATGATGTTGTTGATGAAGAC+CGG | 0.583247 | 2.1:-3291728 | MS.gene61202:CDS |
| AAGGAAGAGTCTTCGATCTG+AGG | 0.584495 | 2.1:-3291064 | MS.gene61202:CDS |
| TGCCCAAAGAAAAGAAGGAA+AGG | 0.586775 | 2.1:-3290697 | MS.gene61202:CDS |
| GAATATGAAGAATTCCTCAA+AGG | 0.587878 | 2.1:+3291891 | None:intergenic |
| CAACTTATGAATTTGCAGCT+CGG | 0.587886 | 2.1:-3291212 | MS.gene61202:CDS |
| CAAGGGAGTCTTGCTTGTTG+TGG | 0.589582 | 2.1:+3290853 | None:intergenic |
| CTTCTCAGTCCATTCAGTAA+GGG | 0.589672 | 2.1:+3291137 | None:intergenic |
| AGAGTCTTCGATCTGAGGAA+TGG | 0.593143 | 2.1:-3291059 | MS.gene61202:CDS |
| GAGGGAATGACGATGAAGAT+CGG | 0.593801 | 2.1:-3291806 | MS.gene61202:CDS |
| AGGTAACAATGATGAGGATG+AGG | 0.595624 | 2.1:-3291514 | MS.gene61202:CDS |
| AGTTGCAGAAAAGGTATCAG+TGG | 0.596635 | 2.1:-3291031 | MS.gene61202:CDS |
| TTCGTGTAGAAGGTTTCGAA+GGG | 0.597829 | 2.1:-3290723 | MS.gene61202:CDS |
| TTGATGAAGACCGGATAGGA+GGG | 0.598250 | 2.1:-3291719 | MS.gene61202:CDS |
| ACGATGAAGATCGGTTAGGA+GGG | 0.600690 | 2.1:-3291797 | MS.gene61202:CDS |
| GAAGACCGGTTAGGAGGGAA+CGG | 0.600818 | 2.1:-3291753 | MS.gene61202:CDS |
| TTGGTTATCCTAACAATCAA+GGG | 0.603345 | 2.1:-3291932 | MS.gene61202:CDS |
| CCTTACTGAATGGACTGAGA+AGG | 0.603468 | 2.1:-3291136 | MS.gene61202:CDS |
| ATGATGAAGATCAGTTAGGA+GGG | 0.607333 | 2.1:-3291824 | MS.gene61202:CDS |
| TTGATGAAGACCGGTTAGGA+GGG | 0.615039 | 2.1:-3291758 | MS.gene61202:CDS |
| TGATGGAACTAGAAAAGATG+AGG | 0.616160 | 2.1:-3290573 | MS.gene61202:CDS |
| AAATGAGATGGATGACATGA+AGG | 0.616691 | 2.1:-3290773 | MS.gene61202:CDS |
| TCATCATTCCCTAAAGCAGG+TGG | 0.639405 | 2.1:-3291652 | MS.gene61202:CDS |
| ATTAAGTTTCAAGATATGGG+TGG | 0.645987 | 2.1:-3290931 | MS.gene61202:CDS |
| TGACAATGACCGACAAAGCG+AGG | 0.648844 | 2.1:-3291598 | MS.gene61202:CDS |
| TTTGTGCTTCCAAATCGTTG+AGG | 0.661381 | 2.1:+3290542 | None:intergenic |
| GAATGAAGGTAACAATGATG+AGG | 0.691606 | 2.1:-3291520 | MS.gene61202:CDS |
| GTTGTTGATGAAGACCGGAT+AGG | 0.693675 | 2.1:-3291723 | MS.gene61202:CDS |
| GAAGACGATGACACCGATGG+GGG | 0.696635 | 2.1:-3291627 | MS.gene61202:CDS |
| TGAAGAAGATAGCAATGACG+AGG | 0.697416 | 2.1:-3291397 | MS.gene61202:CDS |
| GAAAATGTTGATGACAATGA+CGG | 0.700114 | 2.1:-3291327 | MS.gene61202:CDS |
| TTGATGATGATGCAATTGCA+AGG | 0.701591 | 2.1:-3291977 | MS.gene61202:CDS |
| GTTATCTGAAACATTCTGTG+AGG | 0.703353 | 2.1:-3291569 | MS.gene61202:CDS |
| GGATGAAAATGTTGACGACG+AGG | 0.709102 | 2.1:-3291364 | MS.gene61202:CDS |
| TGAAGACGATGACACCGATG+GGG | 0.719428 | 2.1:-3291628 | MS.gene61202:CDS |
| TGAATGAAGATGAATTAGAG+TGG | 0.724734 | 2.1:-3291269 | MS.gene61202:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAGATTGAAAATAATAAA+AGG | - | chr2.1:3291864-3291883 | MS.gene61202:CDS | 15.0% |
| !! | ATTGAAGAAAAAATACAAAA+AGG | - | chr2.1:3291508-3291527 | MS.gene61202:CDS | 15.0% |
| !! | AAGATTAAGTTTCAAGATAT+GGG | - | chr2.1:3291533-3291552 | MS.gene61202:CDS | 20.0% |
| ! | AATATGAAGAATTCCTCAAA+GGG | + | chr2.1:3290578-3290597 | None:intergenic | 25.0% |
| ! | CAAGATTAAGTTTCAAGATA+TGG | - | chr2.1:3291532-3291551 | MS.gene61202:CDS | 25.0% |
| ! | TAATTCATCTTCATTCATCA+TGG | + | chr2.1:3291195-3291214 | None:intergenic | 25.0% |
| ! | TATCTTACCAAAATTCTGAA+TGG | + | chr2.1:3291840-3291859 | None:intergenic | 25.0% |
| !!! | ATGGGTTTATTTTCAAAAGA+TGG | - | chr2.1:3291571-3291590 | MS.gene61202:CDS | 25.0% |
| !!! | TCTTTAGCTTTTGCTTTTTT+GGG | + | chr2.1:3291226-3291245 | None:intergenic | 25.0% |
| AAAGAAAAGAAGGAAAGGAA+GGG | - | chr2.1:3291775-3291794 | MS.gene61202:CDS | 30.0% | |
| ATTAAGTTTCAAGATATGGG+TGG | - | chr2.1:3291536-3291555 | MS.gene61202:CDS | 30.0% | |
| ATTTGTTCTTCTTGATGCTT+GGG | - | chr2.1:3291358-3291377 | MS.gene61202:CDS | 30.0% | |
| GAATATGAAGAATTCCTCAA+AGG | + | chr2.1:3290579-3290598 | None:intergenic | 30.0% | |
| GGTTTCAAAAGTTGAAAGAA+CGG | - | chr2.1:3291457-3291476 | MS.gene61202:CDS | 30.0% | |
| GTTTCAAAAGTTGAAAGAAC+GGG | - | chr2.1:3291458-3291477 | MS.gene61202:CDS | 30.0% | |
| TGAATGAAGATGAATTAGAG+TGG | - | chr2.1:3291198-3291217 | MS.gene61202:CDS | 30.0% | |
| TGTAAATCATGCAAATGAGA+TGG | - | chr2.1:3291682-3291701 | MS.gene61202:CDS | 30.0% | |
| TTGGTTATCCTAACAATCAA+GGG | - | chr2.1:3290535-3290554 | MS.gene61202:CDS | 30.0% | |
| ! | TTCCTTTCCTTCTTTTCTTT+GGG | + | chr2.1:3291775-3291794 | None:intergenic | 30.0% |
| !! | GAAAATGTTGATGACAATGA+CGG | - | chr2.1:3291140-3291159 | MS.gene61202:CDS | 30.0% |
| !!! | CTCTTTAGCTTTTGCTTTTT+TGG | + | chr2.1:3291227-3291246 | None:intergenic | 30.0% |
| AAATGAGATGGATGACATGA+AGG | - | chr2.1:3291694-3291713 | MS.gene61202:CDS | 35.0% | |
| AACTTATGAATTTGCAGCTC+GGG | - | chr2.1:3291256-3291275 | MS.gene61202:CDS | 35.0% | |
| AAGAAAAGAAGGAAAGGAAG+GGG | - | chr2.1:3291776-3291795 | MS.gene61202:CDS | 35.0% | |
| ATCGACATGATCATAATCTC+GGG | + | chr2.1:3290625-3290644 | None:intergenic | 35.0% | |
| ATGATGAAGATCAGTTAGGA+GGG | - | chr2.1:3290643-3290662 | MS.gene61202:CDS | 35.0% | |
| CAAAGAAAAGAAGGAAAGGA+AGG | - | chr2.1:3291774-3291793 | MS.gene61202:CDS | 35.0% | |
| CAACTTATGAATTTGCAGCT+CGG | - | chr2.1:3291255-3291274 | MS.gene61202:CDS | 35.0% | |
| CATCGACATGATCATAATCT+CGG | + | chr2.1:3290626-3290645 | None:intergenic | 35.0% | |
| CATTTGTTCTTCTTGATGCT+TGG | - | chr2.1:3291357-3291376 | MS.gene61202:CDS | 35.0% | |
| GAATGAAGGTAACAATGATG+AGG | - | chr2.1:3290947-3290966 | MS.gene61202:CDS | 35.0% | |
| GCATGATTTACATAAACTCC+AGG | + | chr2.1:3291674-3291693 | None:intergenic | 35.0% | |
| GGAATCAGCAAGTAATTTGA+AGG | + | chr2.1:3291819-3291838 | None:intergenic | 35.0% | |
| GTTGGTTATCCTAACAATCA+AGG | - | chr2.1:3290534-3290553 | MS.gene61202:CDS | 35.0% | |
| TAATAAAAGGCAGCAGATGA+TGG | - | chr2.1:3291877-3291896 | MS.gene61202:CDS | 35.0% | |
| TAGGATAACCAACACCATAT+GGG | + | chr2.1:3290527-3290546 | None:intergenic | 35.0% | |
| TATCCTAACAATCAAGGGTA+TGG | - | chr2.1:3290540-3290559 | MS.gene61202:CDS | 35.0% | |
| TCCTCCTGAAAATACAGAAT+CGG | - | chr2.1:3291721-3291740 | MS.gene61202:CDS | 35.0% | |
| TGATGGAACTAGAAAAGATG+AGG | - | chr2.1:3291894-3291913 | MS.gene61202:CDS | 35.0% | |
| TTAGGAATTCCCTTACTGAA+TGG | - | chr2.1:3291321-3291340 | MS.gene61202:CDS | 35.0% | |
| TTAGGATAACCAACACCATA+TGG | + | chr2.1:3290528-3290547 | None:intergenic | 35.0% | |
| TTCTTCATCAGCATGCTTTA+GGG | + | chr2.1:3291057-3291076 | None:intergenic | 35.0% | |
| TTGTTACCTTCATTCCCAAA+TGG | + | chr2.1:3290942-3290961 | None:intergenic | 35.0% | |
| TTTGTTCTTCTTGATGCTTG+GGG | - | chr2.1:3291359-3291378 | MS.gene61202:CDS | 35.0% | |
| ! | ATGATGTTGTTGATGAAGAC+CGG | - | chr2.1:3290700-3290719 | MS.gene61202:CDS | 35.0% |
| ! | CTTCCTTTCCTTCTTTTCTT+TGG | + | chr2.1:3291776-3291795 | None:intergenic | 35.0% |
| ! | GTTATCTGAAACATTCTGTG+AGG | - | chr2.1:3290898-3290917 | MS.gene61202:CDS | 35.0% |
| !! | GCTGATTCCATTCAGAATTT+TGG | - | chr2.1:3291830-3291849 | MS.gene61202:CDS | 35.0% |
| !! | TTGATGATGATGCAATTGCA+AGG | - | chr2.1:3290490-3290509 | MS.gene61202:CDS | 35.0% |
| AAAATGTTGACGACGAGGAT+GGG | - | chr2.1:3291108-3291127 | MS.gene61202:CDS | 40.0% | |
| AACCATATTCCTCGCTTTGT+CGG | + | chr2.1:3290881-3290900 | None:intergenic | 40.0% | |
| AAGATAGCAATGACGAGGAT+GGG | - | chr2.1:3291075-3291094 | MS.gene61202:CDS | 40.0% | |
| AAGTTTCAAGATATGGGTGG+TGG | - | chr2.1:3291539-3291558 | MS.gene61202:CDS | 40.0% | |
| AATGACGATGAAGATCGGTT+AGG | - | chr2.1:3290666-3290685 | MS.gene61202:CDS | 40.0% | |
| AGATTCATTTGCAGCTGGAT+GGG | + | chr2.1:3290601-3290620 | None:intergenic | 40.0% | |
| AGGATGAAGAAGATGAAGAG+CGG | - | chr2.1:3290973-3290992 | MS.gene61202:CDS | 40.0% | |
| AGGTAACAATGATGAGGATG+AGG | - | chr2.1:3290953-3290972 | MS.gene61202:CDS | 40.0% | |
| ATGGCAACAAGTTGCAGAAA+AGG | - | chr2.1:3291427-3291446 | MS.gene61202:CDS | 40.0% | |
| CTTCTCAGTCCATTCAGTAA+GGG | + | chr2.1:3291333-3291352 | None:intergenic | 40.0% | |
| CTTCTTCATCAGCATGCTTT+AGG | + | chr2.1:3291058-3291077 | None:intergenic | 40.0% | |
| GATGATGAAGATCAGTTAGG+AGG | - | chr2.1:3290642-3290661 | MS.gene61202:CDS | 40.0% | |
| GGAACTAGAAAAGATGAGGA+TGG | - | chr2.1:3291898-3291917 | MS.gene61202:CDS | 40.0% | |
| GTCGATGATGAAGATCAGTT+AGG | - | chr2.1:3290639-3290658 | MS.gene61202:CDS | 40.0% | |
| TAGATTCATTTGCAGCTGGA+TGG | + | chr2.1:3290602-3290621 | None:intergenic | 40.0% | |
| TGAAGAAGATAGCAATGACG+AGG | - | chr2.1:3291070-3291089 | MS.gene61202:CDS | 40.0% | |
| TGATCATCATTCCCTAAAGC+AGG | - | chr2.1:3290812-3290831 | MS.gene61202:CDS | 40.0% | |
| TGCCCAAAGAAAAGAAGGAA+AGG | - | chr2.1:3291770-3291789 | MS.gene61202:CDS | 40.0% | |
| TTCGTGTAGAAGGTTTCGAA+GGG | - | chr2.1:3291744-3291763 | MS.gene61202:CDS | 40.0% | |
| TTGCCATACCCTTGATTGTT+AGG | + | chr2.1:3290546-3290565 | None:intergenic | 40.0% | |
| TTTGTGCTTCCAAATCGTTG+AGG | + | chr2.1:3291928-3291947 | None:intergenic | 40.0% | |
| ! | AGCTGCTAAACGATCTTTTG+GGG | - | chr2.1:3291298-3291317 | MS.gene61202:CDS | 40.0% |
| ! | ATCGGTTTCTGCAACATAGA+AGG | - | chr2.1:3291384-3291403 | MS.gene61202:CDS | 40.0% |
| ! | CAGCTGCTAAACGATCTTTT+GGG | - | chr2.1:3291297-3291316 | MS.gene61202:CDS | 40.0% |
| ! | GATGGATTTCCTCAACGATT+TGG | - | chr2.1:3291916-3291935 | MS.gene61202:CDS | 40.0% |
| ! | TTCCTTCTTTTCTTTGGGCA+AGG | + | chr2.1:3291770-3291789 | None:intergenic | 40.0% |
| !! | ACCGATTCTGTATTTTCAGG+AGG | + | chr2.1:3291725-3291744 | None:intergenic | 40.0% |
| !! | AGTTGCAGAAAAGGTATCAG+TGG | - | chr2.1:3291436-3291455 | MS.gene61202:CDS | 40.0% |
| !! | CGAACCGATTCTGTATTTTC+AGG | + | chr2.1:3291728-3291747 | None:intergenic | 40.0% |
| !! | GAGCGTATTTTTATGAAGCC+TGG | - | chr2.1:3291653-3291672 | MS.gene61202:CDS | 40.0% |
| !!! | CTAAACGATCTTTTGGGGTT+AGG | - | chr2.1:3291303-3291322 | MS.gene61202:CDS | 40.0% |
| AAATGTTGACGACGAGGATG+GGG | - | chr2.1:3291109-3291128 | MS.gene61202:CDS | 45.0% | |
| AAGGAAGAGTCTTCGATCTG+AGG | - | chr2.1:3291403-3291422 | MS.gene61202:CDS | 45.0% | |
| ACCTTCATTCCCAAATGGCT+GGG | + | chr2.1:3290937-3290956 | None:intergenic | 45.0% | |
| ACGATGAAGATCGGTTAGGA+GGG | - | chr2.1:3290670-3290689 | MS.gene61202:CDS | 45.0% | |
| AGAAGATGAAGAGCGGTTAG+TGG | - | chr2.1:3290980-3290999 | MS.gene61202:CDS | 45.0% | |
| AGAGTCTTCGATCTGAGGAA+TGG | - | chr2.1:3291408-3291427 | MS.gene61202:CDS | 45.0% | |
| AGATAGCAATGACGAGGATG+GGG | - | chr2.1:3291076-3291095 | MS.gene61202:CDS | 45.0% | |
| AGGTATCCCTCTAACCCATA+TGG | - | chr2.1:3290510-3290529 | MS.gene61202:CDS | 45.0% | |
| ATGAAGACGATGACACCGAT+GGG | - | chr2.1:3290838-3290857 | MS.gene61202:CDS | 45.0% | |
| CATCATCATTCCCTCCTATC+CGG | + | chr2.1:3290761-3290780 | None:intergenic | 45.0% | |
| CCTTCTCAGTCCATTCAGTA+AGG | + | chr2.1:3291334-3291353 | None:intergenic | 45.0% | |
| CTCCATATTCCCAGCCATTT+GGG | - | chr2.1:3290925-3290944 | MS.gene61202:CDS | 45.0% | |
| CTCTTGAGTTCGAACGACAA+GGG | + | chr2.1:3291634-3291653 | None:intergenic | 45.0% | |
| GAAAATGTTGACGACGAGGA+TGG | - | chr2.1:3291107-3291126 | MS.gene61202:CDS | 45.0% | |
| GAAGATAGCAATGACGAGGA+TGG | - | chr2.1:3291074-3291093 | MS.gene61202:CDS | 45.0% | |
| GAGGGAATGACGATGAAGAT+CGG | - | chr2.1:3290661-3290680 | MS.gene61202:CDS | 45.0% | |
| GCAATCTCAAACACCCTTTG+AGG | - | chr2.1:3290562-3290581 | MS.gene61202:CDS | 45.0% | |
| GGATGAAAATGTTGACGACG+AGG | - | chr2.1:3291103-3291122 | MS.gene61202:CDS | 45.0% | |
| GTCTTCATCCACCTGCTTTA+GGG | + | chr2.1:3290826-3290845 | None:intergenic | 45.0% | |
| GTTCGTGTAGAAGGTTTCGA+AGG | - | chr2.1:3291743-3291762 | MS.gene61202:CDS | 45.0% | |
| TACCTTCATTCCCAAATGGC+TGG | + | chr2.1:3290938-3290957 | None:intergenic | 45.0% | |
| TCATCATTCCCTAAAGCAGG+TGG | - | chr2.1:3290815-3290834 | MS.gene61202:CDS | 45.0% | |
| TCTCCATATTCCCAGCCATT+TGG | - | chr2.1:3290924-3290943 | MS.gene61202:CDS | 45.0% | |
| TCTCTTGAGTTCGAACGACA+AGG | + | chr2.1:3291635-3291654 | None:intergenic | 45.0% | |
| TTCCCAAATGGCTGGGAATA+TGG | + | chr2.1:3290930-3290949 | None:intergenic | 45.0% | |
| TTCTTGATGCTTGGGGTGAT+CGG | - | chr2.1:3291366-3291385 | MS.gene61202:CDS | 45.0% | |
| TTGATGAAGACCGGATAGGA+GGG | - | chr2.1:3290748-3290767 | MS.gene61202:CDS | 45.0% | |
| TTGATGAAGACCGGTTAGGA+GGG | - | chr2.1:3290709-3290728 | MS.gene61202:CDS | 45.0% | |
| ! | CGGTGATAATGACAAGAAGC+AGG | - | chr2.1:3291160-3291179 | MS.gene61202:CDS | 45.0% |
| ! | GCAGCTGCTAAACGATCTTT+TGG | - | chr2.1:3291296-3291315 | MS.gene61202:CDS | 45.0% |
| ! | GTTGTTGATGAAGACCGGAT+AGG | - | chr2.1:3290744-3290763 | MS.gene61202:CDS | 45.0% |
| ! | GTTGTTGATGAAGACCGGTT+AGG | - | chr2.1:3290705-3290724 | MS.gene61202:CDS | 45.0% |
| !! | ACAGAATCGGTTCGTGTAGA+AGG | - | chr2.1:3291734-3291753 | MS.gene61202:CDS | 45.0% |
| !! | ACCAACACCATATGGGTTAG+AGG | + | chr2.1:3290520-3290539 | None:intergenic | 45.0% |
| !! | CCAACACCATATGGGTTAGA+GGG | + | chr2.1:3290519-3290538 | None:intergenic | 45.0% |
| !! | CCTTACTGAATGGACTGAGA+AGG | - | chr2.1:3291331-3291350 | MS.gene61202:CDS | 45.0% |
| !! | GGGTGGTGGAGATAGAAAAT+GGG | - | chr2.1:3291553-3291572 | MS.gene61202:CDS | 45.0% |
| !! | TGGGTGGTGGAGATAGAAAA+TGG | - | chr2.1:3291552-3291571 | MS.gene61202:CDS | 45.0% |
| AGATGAAGAGCGGTTAGTGG+AGG | - | chr2.1:3290983-3291002 | MS.gene61202:CDS | 50.0% | |
| ATTGTCATCACCACCCCCAT+CGG | + | chr2.1:3290856-3290875 | None:intergenic | 50.0% | |
| CAATGACGAGGATGGGGATA+GGG | - | chr2.1:3291082-3291101 | MS.gene61202:CDS | 50.0% | |
| CCCTCTAACCCATATGGTGT+TGG | - | chr2.1:3290516-3290535 | MS.gene61202:CDS | 50.0% | |
| CGGGTAGATTCATTTGCAGC+TGG | + | chr2.1:3290606-3290625 | None:intergenic | 50.0% | |
| CGTCTTCATCCACCTGCTTT+AGG | + | chr2.1:3290827-3290846 | None:intergenic | 50.0% | |
| GACCGACAAAGCGAGGAATA+TGG | - | chr2.1:3290876-3290895 | MS.gene61202:CDS | 50.0% | |
| GACGATGAAGATCGGTTAGG+AGG | - | chr2.1:3290669-3290688 | MS.gene61202:CDS | 50.0% | |
| GATGAAGACGATGACACCGA+TGG | - | chr2.1:3290837-3290856 | MS.gene61202:CDS | 50.0% | |
| GGCCTTGCCCAAAGAAAAGA+AGG | - | chr2.1:3291765-3291784 | MS.gene61202:CDS | 50.0% | |
| TCCCAGCCATTTGGGAATGA+AGG | - | chr2.1:3290933-3290952 | MS.gene61202:CDS | 50.0% | |
| TGAAGACGATGACACCGATG+GGG | - | chr2.1:3290839-3290858 | MS.gene61202:CDS | 50.0% | |
| TGACAATGACCGACAAAGCG+AGG | - | chr2.1:3290869-3290888 | MS.gene61202:CDS | 50.0% | |
| ! | CAAGGGAGTCTTGCTTGTTG+TGG | + | chr2.1:3291617-3291636 | None:intergenic | 50.0% |
| ! | GTTGATGAAGACCGGATAGG+AGG | - | chr2.1:3290747-3290766 | MS.gene61202:CDS | 50.0% |
| ! | GTTGATGAAGACCGGTTAGG+AGG | - | chr2.1:3290708-3290727 | MS.gene61202:CDS | 50.0% |
| CATCACCGTTCCCTCCTAAC+CGG | + | chr2.1:3290722-3290741 | None:intergenic | 55.0% | |
| CGTTTAGCAGCTGCAGCTGA+CGG | + | chr2.1:3291290-3291309 | None:intergenic | 55.0% | |
| GAAGACCGGTTAGGAGGGAA+CGG | - | chr2.1:3290714-3290733 | MS.gene61202:CDS | 55.0% | |
| GAAGACGATGACACCGATGG+GGG | - | chr2.1:3290840-3290859 | MS.gene61202:CDS | 55.0% | |
| GCAATGACGAGGATGGGGAT+AGG | - | chr2.1:3291081-3291100 | MS.gene61202:CDS | 55.0% | |
| TGACGACGAGGATGGGGATA+GGG | - | chr2.1:3291115-3291134 | MS.gene61202:CDS | 55.0% | |
| TTGACGACGAGGATGGGGAT+AGG | - | chr2.1:3291114-3291133 | MS.gene61202:CDS | 55.0% | |
| !! | GGGAGTCTTGCTTGTTGTGG+TGG | + | chr2.1:3291614-3291633 | None:intergenic | 55.0% |
| GACGATGACACCGATGGGGG+TGG | - | chr2.1:3290843-3290862 | MS.gene61202:CDS | 65.0% | |
| GCAGCTGCAGCTGACGGTGT+TGG | + | chr2.1:3291284-3291303 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 3290480 | 3292009 | 3290480 | ID=MS.gene61202 |
| chr2.1 | mRNA | 3290480 | 3292009 | 3290480 | ID=MS.gene61202.t1;Parent=MS.gene61202 |
| chr2.1 | exon | 3290480 | 3292009 | 3290480 | ID=MS.gene61202.t1.exon1;Parent=MS.gene61202.t1 |
| chr2.1 | CDS | 3290480 | 3292009 | 3290480 | ID=cds.MS.gene61202.t1;Parent=MS.gene61202.t1 |
| Gene Sequence |
| Protein sequence |
