Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20096.t1 | XP_003622190.1 | 97.8 | 548 | 11 | 1 | 1 | 548 | 1 | 547 | 0.00E+00 | 1075.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20096.t1 | Q9ZS97 | 76.7 | 558 | 119 | 4 | 1 | 548 | 1 | 557 | 2.2e-248 | 859.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20096.t1 | G7L3A8 | 97.8 | 548 | 11 | 1 | 1 | 548 | 1 | 547 | 0.0e+00 | 1075.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene20096 | 0.832607 | 8.58E-56 | -1.69E-46 |
| MS.gene049153 | MS.gene20096 | 0.832407 | 9.62E-56 | -1.69E-46 |
| MS.gene049170 | MS.gene20096 | 0.807411 | 5.12E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene20096 | 0.89666 | 2.98E-76 | -1.69E-46 |
| MS.gene049369 | MS.gene20096 | 0.831349 | 1.76E-55 | -1.69E-46 |
| MS.gene049488 | MS.gene20096 | 0.834356 | 3.14E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene20096 | 0.844367 | 7.90E-59 | -1.69E-46 |
| MS.gene050128 | MS.gene20096 | 0.824025 | 1.01E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene20096 | 0.821131 | 4.75E-53 | -1.69E-46 |
| MS.gene050426 | MS.gene20096 | -0.825209 | 5.31E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene20096 | 0.803955 | 2.72E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene20096 | 0.847488 | 1.12E-59 | -1.69E-46 |
| MS.gene050971 | MS.gene20096 | 0.833142 | 6.32E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene20096 | 0.806215 | 9.16E-50 | -1.69E-46 |
| MS.gene051360 | MS.gene20096 | 0.822607 | 2.16E-53 | -1.69E-46 |
| MS.gene051521 | MS.gene20096 | 0.806314 | 8.73E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene20096 | 0.820525 | 6.55E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene20096 | 0.83898 | 2.08E-57 | -1.69E-46 |
| MS.gene052135 | MS.gene20096 | 0.808745 | 2.66E-50 | -1.69E-46 |
| MS.gene052136 | MS.gene20096 | 0.808574 | 2.90E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene20096 | 0.92041 | 1.33E-87 | -1.69E-46 |
| MS.gene052253 | MS.gene20096 | 0.834905 | 2.29E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene20096 | 0.821485 | 3.94E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene20096 | 0.883596 | 3.92E-71 | -1.69E-46 |
| MS.gene052414 | MS.gene20096 | 0.816615 | 5.05E-52 | -1.69E-46 |
| MS.gene052469 | MS.gene20096 | 0.824548 | 7.61E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene20096 | 0.817361 | 3.43E-52 | -1.69E-46 |
| MS.gene052758 | MS.gene20096 | 0.804054 | 2.60E-49 | -1.69E-46 |
| MS.gene053073 | MS.gene20096 | 0.821214 | 4.55E-53 | -1.69E-46 |
| MS.gene05316 | MS.gene20096 | 0.887761 | 1.07E-72 | -1.69E-46 |
| MS.gene053209 | MS.gene20096 | 0.808558 | 2.92E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene20096 | 0.806777 | 6.98E-50 | -1.69E-46 |
| MS.gene053494 | MS.gene20096 | 0.811423 | 7.05E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene20096 | 0.82984 | 4.11E-55 | -1.69E-46 |
| MS.gene053559 | MS.gene20096 | 0.833199 | 6.12E-56 | -1.69E-46 |
| MS.gene053758 | MS.gene20096 | 0.840771 | 7.11E-58 | -1.69E-46 |
| MS.gene053836 | MS.gene20096 | 0.805304 | 1.42E-49 | -1.69E-46 |
| MS.gene053912 | MS.gene20096 | 0.878155 | 3.53E-69 | -1.69E-46 |
| MS.gene053928 | MS.gene20096 | 0.805893 | 1.07E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene20096 | 0.849523 | 3.06E-60 | -1.69E-46 |
| MS.gene054183 | MS.gene20096 | 0.802468 | 5.53E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene20096 | 0.851781 | 7.10E-61 | -1.69E-46 |
| MS.gene054930 | MS.gene20096 | 0.833956 | 3.96E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene20096 | 0.835858 | 1.31E-56 | -1.69E-46 |
| MS.gene055539 | MS.gene20096 | 0.83205 | 1.18E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene20096 | 0.847509 | 1.11E-59 | -1.69E-46 |
| MS.gene055744 | MS.gene20096 | 0.802336 | 5.89E-49 | -1.69E-46 |
| MS.gene056233 | MS.gene20096 | 0.856762 | 2.58E-62 | -1.69E-46 |
| MS.gene056407 | MS.gene20096 | 0.804221 | 2.40E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene20096 | 0.839386 | 1.63E-57 | -1.69E-46 |
| MS.gene056609 | MS.gene20096 | 0.83972 | 1.34E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene20096 | 0.909562 | 4.96E-82 | -1.69E-46 |
| MS.gene056719 | MS.gene20096 | 0.845575 | 3.73E-59 | -1.69E-46 |
| MS.gene056723 | MS.gene20096 | 0.812248 | 4.66E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene20096 | -0.810581 | 1.07E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene20096 | 0.826856 | 2.16E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene20096 | 0.809247 | 2.08E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene20096 | 0.870773 | 1.13E-66 | -1.69E-46 |
| MS.gene057199 | MS.gene20096 | 0.83931 | 1.71E-57 | -1.69E-46 |
| MS.gene05735 | MS.gene20096 | 0.827029 | 1.96E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene20096 | 0.865405 | 6.05E-65 | -1.69E-46 |
| MS.gene057448 | MS.gene20096 | 0.860784 | 1.62E-63 | -1.69E-46 |
| MS.gene057449 | MS.gene20096 | 0.862486 | 4.90E-64 | -1.69E-46 |
| MS.gene057450 | MS.gene20096 | 0.86024 | 2.37E-63 | -1.69E-46 |
| MS.gene057537 | MS.gene20096 | 0.870948 | 9.91E-67 | -1.69E-46 |
| MS.gene057749 | MS.gene20096 | 0.828465 | 8.86E-55 | -1.69E-46 |
| MS.gene057823 | MS.gene20096 | 0.828182 | 1.04E-54 | -1.69E-46 |
| MS.gene057825 | MS.gene20096 | 0.801953 | 7.06E-49 | -1.69E-46 |
| MS.gene057927 | MS.gene20096 | 0.809954 | 1.47E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene20096 | 0.822495 | 2.30E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene20096 | 0.833827 | 4.27E-56 | -1.69E-46 |
| MS.gene058082 | MS.gene20096 | 0.83091 | 2.25E-55 | -1.69E-46 |
| MS.gene058090 | MS.gene20096 | 0.817684 | 2.90E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene20096 | 0.834572 | 2.77E-56 | -1.69E-46 |
| MS.gene058142 | MS.gene20096 | 0.843573 | 1.29E-58 | -1.69E-46 |
| MS.gene058365 | MS.gene20096 | 0.836934 | 6.99E-57 | -1.69E-46 |
| MS.gene058710 | MS.gene20096 | 0.82562 | 4.25E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene20096 | 0.837643 | 4.60E-57 | -1.69E-46 |
| MS.gene058928 | MS.gene20096 | 0.882773 | 7.86E-71 | -1.69E-46 |
| MS.gene058948 | MS.gene20096 | 0.826632 | 2.44E-54 | -1.69E-46 |
| MS.gene058949 | MS.gene20096 | 0.864769 | 9.58E-65 | -1.69E-46 |
| MS.gene059011 | MS.gene20096 | 0.805525 | 1.28E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene20096 | 0.808964 | 2.39E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene20096 | 0.890491 | 9.39E-74 | -1.69E-46 |
| MS.gene059366 | MS.gene20096 | 0.869006 | 4.28E-66 | -1.69E-46 |
| MS.gene059420 | MS.gene20096 | 0.841216 | 5.44E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene20096 | 0.834941 | 2.24E-56 | -1.69E-46 |
| MS.gene05959 | MS.gene20096 | 0.837729 | 4.38E-57 | -1.69E-46 |
| MS.gene059674 | MS.gene20096 | 0.810787 | 9.69E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene20096 | 0.83806 | 3.60E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene20096 | 0.843733 | 1.17E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene20096 | 0.835149 | 1.99E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene20096 | 0.829563 | 4.80E-55 | -1.69E-46 |
| MS.gene059708 | MS.gene20096 | 0.803791 | 2.95E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene20096 | 0.807017 | 6.21E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene20096 | 0.816489 | 5.39E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene20096 | 0.805412 | 1.35E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene20096 | 0.857374 | 1.70E-62 | -1.69E-46 |
| MS.gene05984 | MS.gene20096 | 0.830249 | 3.27E-55 | -1.69E-46 |
| MS.gene05986 | MS.gene20096 | 0.812025 | 5.22E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene20096 | 0.837112 | 6.30E-57 | -1.69E-46 |
| MS.gene059899 | MS.gene20096 | 0.80459 | 2.01E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene20096 | 0.849759 | 2.63E-60 | -1.69E-46 |
| MS.gene060247 | MS.gene20096 | 0.851657 | 7.69E-61 | -1.69E-46 |
| MS.gene060407 | MS.gene20096 | 0.831905 | 1.28E-55 | -1.69E-46 |
| MS.gene060495 | MS.gene20096 | 0.858768 | 6.57E-63 | -1.69E-46 |
| MS.gene060496 | MS.gene20096 | 0.841161 | 5.62E-58 | -1.69E-46 |
| MS.gene060818 | MS.gene20096 | 0.805609 | 1.23E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene20096 | 0.801188 | 1.01E-48 | -1.69E-46 |
| MS.gene061049 | MS.gene20096 | 0.844768 | 6.16E-59 | -1.69E-46 |
| MS.gene061051 | MS.gene20096 | -0.863072 | 3.23E-64 | -1.69E-46 |
| MS.gene061154 | MS.gene20096 | 0.813084 | 3.06E-51 | -1.69E-46 |
| MS.gene061159 | MS.gene20096 | 0.876878 | 9.84E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20096.t1 | MTR_7g038720 | 97.993 | 548 | 10 | 1 | 1 | 548 | 1 | 547 | 0.0 | 1120 |
| MS.gene20096.t1 | MTR_7g030030 | 97.993 | 548 | 10 | 1 | 1 | 548 | 1 | 547 | 0.0 | 1120 |
| MS.gene20096.t1 | MTR_8g019500 | 95.281 | 551 | 18 | 5 | 1 | 548 | 1 | 546 | 0.0 | 1076 |
| MS.gene20096.t1 | MTR_5g014290 | 24.920 | 313 | 203 | 9 | 245 | 539 | 171 | 469 | 6.29e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20096.t1 | AT4G04770 | 76.064 | 564 | 112 | 5 | 1 | 548 | 1 | 557 | 0.0 | 892 |
| MS.gene20096.t1 | AT5G44316 | 57.762 | 554 | 144 | 9 | 1 | 548 | 1 | 470 | 0.0 | 612 |
| MS.gene20096.t1 | AT1G32500 | 24.923 | 325 | 222 | 6 | 215 | 529 | 148 | 460 | 2.56e-19 | 91.3 |
Find 118 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACTGATCTTCACCAATTT+TGG | 0.088841 | 7.3:-60672046 | None:intergenic |
| AATGAGCTTCCCGATGAATT+TGG | 0.191847 | 7.3:+60672147 | MS.gene20096:CDS |
| GATTTGGTTAGGAATTATTT+AGG | 0.202220 | 7.3:+60670121 | MS.gene20096:CDS |
| CAGTGTGATTCCATGCTTAT+TGG | 0.219953 | 7.3:+60670802 | MS.gene20096:CDS |
| TAGGAGTATGGTGGAGTATT+TGG | 0.220424 | 7.3:+60670321 | MS.gene20096:CDS |
| TTAATCGAGGGTTTCTTCTT+AGG | 0.225416 | 7.3:-60669899 | None:intergenic |
| GTTTCTGTTGATAATCCTTT+TGG | 0.244130 | 7.3:-60669722 | None:intergenic |
| AAACGATTCTGTTCGTTTAA+CGG | 0.286876 | 7.3:-60669977 | None:intergenic |
| GGATAACGGTGATTTGTGTT+TGG | 0.304767 | 7.3:-60669549 | None:intergenic |
| GATAACGGTGATTTGTGTTT+GGG | 0.306425 | 7.3:-60669548 | None:intergenic |
| CGCGATTACGACAAGAAATT+CGG | 0.317548 | 7.3:+60669668 | MS.gene20096:CDS |
| AAATAATTCCTAACCAAATC+TGG | 0.322490 | 7.3:-60670118 | None:intergenic |
| GCTTGTTCAGGTTCAGTCTA+AGG | 0.336826 | 7.3:+60670756 | MS.gene20096:CDS |
| AGATTGGGAAGTGGGTTTGA+TGG | 0.355909 | 7.3:-60669517 | None:intergenic |
| CTGTTATAGAGGGCTTGTTC+AGG | 0.372714 | 7.3:+60670744 | MS.gene20096:CDS |
| TGAGATACTTCGATAAGCTT+GGG | 0.373612 | 7.3:+60669951 | MS.gene20096:CDS |
| ATTTGGTTAGGAATTATTTA+GGG | 0.377879 | 7.3:+60670122 | MS.gene20096:CDS |
| CGTTGATTGTGGCGGATGAT+AGG | 0.379139 | 7.3:+60670302 | MS.gene20096:CDS |
| GAAGTATCCGAGCGTTGTTT+TGG | 0.379206 | 7.3:+60670573 | MS.gene20096:CDS |
| TTTCTATTGCAACTACTCAT+AGG | 0.386827 | 7.3:+60670035 | MS.gene20096:CDS |
| TTCGATTTCGGATGCTGTTA+AGG | 0.387550 | 7.3:+60670090 | MS.gene20096:CDS |
| AGTATTCGACTGTGCAGAAT+TGG | 0.387705 | 7.3:+60670428 | MS.gene20096:CDS |
| TGTTAAGGAGTATCCAGATT+TGG | 0.388881 | 7.3:+60670105 | MS.gene20096:CDS |
| CCCTAAAATCCGAACCTGAT+TGG | 0.389746 | 7.3:+60669762 | MS.gene20096:CDS |
| GAGGCTAGTACGTCCAAAAT+TGG | 0.390303 | 7.3:+60672033 | MS.gene20096:CDS |
| TCTTGTCGTAATCGCGGTTA+CGG | 0.398938 | 7.3:-60669661 | None:intergenic |
| AGGATTAATGCGTTGGAGAC+GGG | 0.399896 | 7.3:+60670265 | MS.gene20096:CDS |
| GTTGAGTTGTATTGTGGGGA+GGG | 0.400958 | 7.3:+60670394 | MS.gene20096:CDS |
| CGAAAATGAAAGCACCAAAT+TGG | 0.402603 | 7.3:+60669822 | MS.gene20096:CDS |
| AGGAGTATCCAGATTTGGTT+AGG | 0.403665 | 7.3:+60670110 | MS.gene20096:CDS |
| CTCATGAGCTTGAAGCTTGA+GGG | 0.405460 | 7.3:+60672186 | MS.gene20096:CDS |
| TCGTGGACTCAGGTGGAGAC+TGG | 0.409146 | 7.3:+60670535 | MS.gene20096:CDS |
| TTGAGTGGGTTGTGGATGTA+AGG | 0.416950 | 7.3:-60669468 | None:intergenic |
| AAGCTGGTTTGAGTGGGTTG+TGG | 0.422237 | 7.3:-60669476 | None:intergenic |
| GCAATGGCTGCTATGATCTC+TGG | 0.432036 | 7.3:+60672105 | MS.gene20096:CDS |
| TAATTATCAACAGGCTGATA+CGG | 0.438638 | 7.3:+60670642 | MS.gene20096:CDS |
| CGAAAATTGAGCATCCAATC+AGG | 0.439256 | 7.3:-60669776 | None:intergenic |
| AGACTGGGTCCGCGATTACT+TGG | 0.440480 | 7.3:+60670551 | MS.gene20096:CDS |
| ATATCTTGAAAATCTATAGT+TGG | 0.442228 | 7.3:-60669860 | None:intergenic |
| TTGAGATACTTCGATAAGCT+TGG | 0.447006 | 7.3:+60669950 | MS.gene20096:CDS |
| TCGTGCTCAATTCTTGCTGA+TGG | 0.448471 | 7.3:-60672012 | None:intergenic |
| TATGTGTTGTCAGACCAATT+TGG | 0.456036 | 7.3:-60669836 | None:intergenic |
| TTTGACGAATAATTATCAAC+AGG | 0.459812 | 7.3:+60670633 | MS.gene20096:CDS |
| GTATTTCTGCTGGACATTCA+AGG | 0.462786 | 7.3:+60670719 | MS.gene20096:CDS |
| ATTGAGCATCCAATCAGGTT+CGG | 0.471647 | 7.3:-60669771 | None:intergenic |
| ATATCGAAGGGTATTTCTGC+TGG | 0.472937 | 7.3:+60670709 | MS.gene20096:CDS |
| TATCTTGAAAATCTATAGTT+GGG | 0.473477 | 7.3:-60669859 | None:intergenic |
| CGGTTGTTGAGTTGTATTGT+GGG | 0.475492 | 7.3:+60670389 | MS.gene20096:CDS |
| TGGTATGCGGGTGATGAGAA+TGG | 0.481158 | 7.3:+60670448 | MS.gene20096:CDS |
| TGTGGCGGATGATAGGAGTA+TGG | 0.485495 | 7.3:+60670309 | MS.gene20096:CDS |
| ATCGGACACTTAACACCCTT+CGG | 0.492822 | 7.3:-60670223 | None:intergenic |
| ACCTCGGAGCCAAATTCATC+GGG | 0.494987 | 7.3:-60672156 | None:intergenic |
| GGGACTAAGATGATACATAA+AGG | 0.495409 | 7.3:+60670664 | MS.gene20096:CDS |
| CGCGGTTACGGAGAATTTCA+CGG | 0.497813 | 7.3:-60669649 | None:intergenic |
| CATTCAAGGAACTGTTATAG+AGG | 0.498044 | 7.3:+60670733 | MS.gene20096:CDS |
| GATTCTTTCACAATTCCAAA+AGG | 0.499044 | 7.3:+60669707 | MS.gene20096:CDS |
| TTGTCATCGGTAGATGAAGT+TGG | 0.506952 | 7.3:-60669623 | None:intergenic |
| AATTATCAACAGGCTGATAC+GGG | 0.507180 | 7.3:+60670643 | MS.gene20096:CDS |
| GGTGATGAGAATGGGAAAGG+TGG | 0.510158 | 7.3:+60670457 | MS.gene20096:CDS |
| TGTTGAGTTGTATTGTGGGG+AGG | 0.511336 | 7.3:+60670393 | MS.gene20096:CDS |
| TCGAAGTATCTCAAAAGCTC+AGG | 0.512282 | 7.3:-60669941 | None:intergenic |
| TAGGATTAATGCGTTGGAGA+CGG | 0.522422 | 7.3:+60670264 | MS.gene20096:CDS |
| TAACGGTGATTTGTGTTTGG+GGG | 0.522817 | 7.3:-60669546 | None:intergenic |
| ACTCATGAGCTTGAAGCTTG+AGG | 0.525889 | 7.3:+60672185 | MS.gene20096:CDS |
| TTTGAGAAGCTGGTTTGAGT+GGG | 0.526103 | 7.3:-60669482 | None:intergenic |
| CGTGGACTCAGGTGGAGACT+GGG | 0.526944 | 7.3:+60670536 | MS.gene20096:CDS |
| CACCTCGGAGCCAAATTCAT+CGG | 0.533895 | 7.3:-60672157 | None:intergenic |
| TAGGGCTGAGATTAAACGAA+TGG | 0.540218 | 7.3:-60669744 | None:intergenic |
| ATTTGAGAGGACGTTGATTG+TGG | 0.541228 | 7.3:+60670291 | MS.gene20096:CDS |
| TTCTTCTAAGCTATTAATCG+AGG | 0.547950 | 7.3:-60669912 | None:intergenic |
| GTGATGAGAATGGGAAAGGT+GGG | 0.548593 | 7.3:+60670458 | MS.gene20096:CDS |
| CAAGCTTCAAGCTCATGAGT+TGG | 0.553479 | 7.3:-60672182 | None:intergenic |
| GGATTAATGCGTTGGAGACG+GGG | 0.554424 | 7.3:+60670266 | MS.gene20096:CDS |
| GGTATGCGGGTGATGAGAAT+GGG | 0.557534 | 7.3:+60670449 | MS.gene20096:CDS |
| TTGGAGGGTGATGAGAGTGT+TGG | 0.558769 | 7.3:+60670592 | MS.gene20096:CDS |
| AGGAAGACACTTGAGAAGGC+TGG | 0.560350 | 7.3:+60670055 | MS.gene20096:CDS |
| TCACCCTCCAAAACAACGCT+CGG | 0.561244 | 7.3:-60670580 | None:intergenic |
| TCCATGGCTTCTCTTCTCAA+CGG | 0.561678 | 7.3:+60669431 | None:intergenic |
| GAGATACTTCGATAAGCTTG+GGG | 0.563487 | 7.3:+60669952 | MS.gene20096:CDS |
| AAAGAGTAGGATAATATCGA+AGG | 0.564748 | 7.3:+60670696 | MS.gene20096:CDS |
| GCGGTTGTTGAGTTGTATTG+TGG | 0.564872 | 7.3:+60670388 | MS.gene20096:CDS |
| GCCGTTGAGAAGAGAAGCCA+TGG | 0.565553 | 7.3:-60669432 | None:intergenic |
| ATAACGGTGATTTGTGTTTG+GGG | 0.566138 | 7.3:-60669547 | None:intergenic |
| CGCATTAATCCTAAAATACG+TGG | 0.567141 | 7.3:-60670254 | None:intergenic |
| TCTTCTAAGCTATTAATCGA+GGG | 0.569205 | 7.3:-60669911 | None:intergenic |
| GTCGAAGATATCGTGGACTC+AGG | 0.570802 | 7.3:+60670525 | MS.gene20096:CDS |
| AAGGAAAGAATACAAAGAGT+AGG | 0.571457 | 7.3:+60670683 | MS.gene20096:CDS |
| TGGAGACGGGGCAATTTGAG+AGG | 0.580773 | 7.3:+60670278 | MS.gene20096:CDS |
| GCGGGTGATGAGAATGGGAA+AGG | 0.581778 | 7.3:+60670454 | MS.gene20096:CDS |
| GAATACATATCCTTACATCC+AGG | 0.591093 | 7.3:+60670840 | MS.gene20096:CDS |
| AGTATGGTGGAGTATTTGGA+AGG | 0.598035 | 7.3:+60670325 | MS.gene20096:CDS |
| ATTCAAGGAACTGTTATAGA+GGG | 0.600696 | 7.3:+60670734 | MS.gene20096:CDS |
| TCATGAGCTTGAAGCTTGAG+GGG | 0.600976 | 7.3:+60672187 | MS.gene20096:CDS |
| TTGAAGCTTGAGGGGTCAGT+CGG | 0.603318 | 7.3:+60672195 | MS.gene20096:CDS |
| AAGAGTAGGATAATATCGAA+GGG | 0.614934 | 7.3:+60670697 | MS.gene20096:CDS |
| AAATACGTGGATATCTGCAT+CGG | 0.617924 | 7.3:-60670241 | None:intergenic |
| GAAGATATCGTGGACTCAGG+TGG | 0.621504 | 7.3:+60670528 | MS.gene20096:CDS |
| ACGAAGAGAGGATTGTGTGC+TGG | 0.622028 | 7.3:+60670496 | MS.gene20096:CDS |
| TTATTACGCTGCATTGAATG+CGG | 0.624878 | 7.3:+60670168 | MS.gene20096:CDS |
| TCCCGATGAATTTGGCTCCG+AGG | 0.627231 | 7.3:+60672155 | MS.gene20096:CDS |
| AGCACTATCACCAATAAGCA+TGG | 0.629725 | 7.3:-60670812 | None:intergenic |
| GTAAGAAGTCGAAGATATCG+TGG | 0.634199 | 7.3:+60670518 | MS.gene20096:CDS |
| CGAATTTCTTGTCGTAATCG+CGG | 0.638662 | 7.3:-60669667 | None:intergenic |
| ACTGTGCAGAATTGGTATGC+GGG | 0.639721 | 7.3:+60670436 | MS.gene20096:CDS |
| GGCGGATGATAGGAGTATGG+TGG | 0.641159 | 7.3:+60670312 | MS.gene20096:CDS |
| GTTCGTAACTAACGTCTGAA+CGG | 0.647103 | 7.3:-60669586 | None:intergenic |
| GCTCATGAGTTGGTTCACCT+CGG | 0.650340 | 7.3:-60672172 | None:intergenic |
| GCGTAATAATTATCATCACT+AGG | 0.656830 | 7.3:-60670154 | None:intergenic |
| GACTGTGCAGAATTGGTATG+CGG | 0.657058 | 7.3:+60670435 | MS.gene20096:CDS |
| TCATAGGAAGACACTTGAGA+AGG | 0.657651 | 7.3:+60670051 | MS.gene20096:CDS |
| TGTTCAGGTTCAGTCTAAGG+CGG | 0.659200 | 7.3:+60670759 | MS.gene20096:CDS |
| GAAGCTCATTGAAGACATCA+CGG | 0.661065 | 7.3:-60672134 | None:intergenic |
| GTATGGTGGAGTATTTGGAA+GGG | 0.671768 | 7.3:+60670326 | MS.gene20096:CDS |
| TGAGAGGACGTTGATTGTGG+CGG | 0.679907 | 7.3:+60670294 | MS.gene20096:CDS |
| ATCAGCAAGAATTGAGCACG+AGG | 0.694946 | 7.3:+60672014 | MS.gene20096:CDS |
| CGGATACTTCCAAGTAATCG+CGG | 0.697357 | 7.3:-60670560 | None:intergenic |
| GGTTGTTGAGTTGTATTGTG+GGG | 0.708201 | 7.3:+60670390 | MS.gene20096:CDS |
| ATTATCAACAGGCTGATACG+GGG | 0.731328 | 7.3:+60670644 | MS.gene20096:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAGCAATTAATTAT+GGG | + | chr7.3:60671283-60671302 | MS.gene20096:intron | 10.0% |
| !! | ATTACAAATATGGAAAAAAA+GGG | - | chr7.3:60671930-60671949 | None:intergenic | 15.0% |
| !! | GATAAAATAGCAATTAATTA+TGG | + | chr7.3:60671282-60671301 | MS.gene20096:intron | 15.0% |
| !! | AATAATTAATGTCTATGGAT+CGG | + | chr7.3:60670916-60670935 | MS.gene20096:intron | 20.0% |
| !! | AGATAACGATAAGAATATAT+GGG | + | chr7.3:60670945-60670964 | MS.gene20096:intron | 20.0% |
| !! | ATATCTTGAAAATCTATAGT+TGG | - | chr7.3:60669863-60669882 | None:intergenic | 20.0% |
| !! | ATTTGGTTAGGAATTATTTA+GGG | + | chr7.3:60670122-60670141 | MS.gene20096:CDS | 20.0% |
| !! | CAAAGATTTCATCAATAATA+TGG | + | chr7.3:60671807-60671826 | MS.gene20096:intron | 20.0% |
| !! | CAGTTAATAATTAATGTCTA+TGG | + | chr7.3:60670911-60670930 | MS.gene20096:intron | 20.0% |
| !! | CATTACAAATATGGAAAAAA+AGG | - | chr7.3:60671931-60671950 | None:intergenic | 20.0% |
| !! | TAGATAACGATAAGAATATA+TGG | + | chr7.3:60670944-60670963 | MS.gene20096:intron | 20.0% |
| !! | TATCTTGAAAATCTATAGTT+GGG | - | chr7.3:60669862-60669881 | None:intergenic | 20.0% |
| !! | TCTATATTAGTATTACTTCA+AGG | - | chr7.3:60671243-60671262 | None:intergenic | 20.0% |
| !! | TGTTTAATCAAGTATGAAAA+CGG | - | chr7.3:60671644-60671663 | None:intergenic | 20.0% |
| !!! | AATTGATTCCTTAAAATTCA+AGG | - | chr7.3:60671319-60671338 | None:intergenic | 20.0% |
| !!! | TGTTATATTTTGTTCGATTT+CGG | + | chr7.3:60670078-60670097 | MS.gene20096:CDS | 20.0% |
| !!! | TTATTTTACTTTCAACAAAG+AGG | + | chr7.3:60672066-60672085 | MS.gene20096:CDS | 20.0% |
| !!! | TTGGATATATTTTCTAAGAT+TGG | + | chr7.3:60671013-60671032 | MS.gene20096:intron | 20.0% |
| ! | AAATAATTCCTAACCAAATC+TGG | - | chr7.3:60670121-60670140 | None:intergenic | 25.0% |
| ! | AATAGACTATGAAAAAGCAA+TGG | + | chr7.3:60672089-60672108 | MS.gene20096:CDS | 25.0% |
| ! | AATTATGTAACAATAGAGCA+TGG | - | chr7.3:60671094-60671113 | None:intergenic | 25.0% |
| ! | ATATCTTATGCACAGAATAT+CGG | + | chr7.3:60671506-60671525 | MS.gene20096:intron | 25.0% |
| ! | CCTTAAAATTCAAGGATTAT+TGG | - | chr7.3:60671311-60671330 | None:intergenic | 25.0% |
| ! | CTATGATTTAAGAACTACAT+GGG | + | chr7.3:60671475-60671494 | MS.gene20096:intron | 25.0% |
| ! | GAACAAAAAAAAAAGTTACC+TGG | - | chr7.3:60670861-60670880 | None:intergenic | 25.0% |
| ! | GTTTAATCAAGTATGAAAAC+GGG | - | chr7.3:60671643-60671662 | None:intergenic | 25.0% |
| ! | TTTAATCAAGTATGAAAACG+GGG | - | chr7.3:60671642-60671661 | None:intergenic | 25.0% |
| ! | TTTCATCTATAACTTGAAAC+TGG | - | chr7.3:60671219-60671238 | None:intergenic | 25.0% |
| ! | TTTGACGAATAATTATCAAC+AGG | + | chr7.3:60670633-60670652 | MS.gene20096:CDS | 25.0% |
| !! | ATTTTTATCATAAGAAGGTG+CGG | - | chr7.3:60670356-60670375 | None:intergenic | 25.0% |
| !! | CCAATAATCCTTGAATTTTA+AGG | + | chr7.3:60671308-60671327 | MS.gene20096:intron | 25.0% |
| !! | GATTTGGTTAGGAATTATTT+AGG | + | chr7.3:60670121-60670140 | MS.gene20096:CDS | 25.0% |
| !! | TATAATTTTGTTACGAAGAG+AGG | + | chr7.3:60670484-60670503 | MS.gene20096:CDS | 25.0% |
| !!! | AGCTGATTTTTATCATAAGA+AGG | - | chr7.3:60670361-60670380 | None:intergenic | 25.0% |
| !!! | ATTTTAACGGTTTTGGATAA+CGG | - | chr7.3:60669566-60669585 | None:intergenic | 25.0% |
| AAAAAAGTTACCTGGATGTA+AGG | - | chr7.3:60670853-60670872 | None:intergenic | 30.0% | |
| AAACGATTCTGTTCGTTTAA+CGG | - | chr7.3:60669980-60669999 | None:intergenic | 30.0% | |
| AAAGAGTAGGATAATATCGA+AGG | + | chr7.3:60670696-60670715 | MS.gene20096:CDS | 30.0% | |
| AAAGGGTGAAAATAAGGAAA+AGG | - | chr7.3:60671913-60671932 | None:intergenic | 30.0% | |
| AAGAGTAGGATAATATCGAA+GGG | + | chr7.3:60670697-60670716 | MS.gene20096:CDS | 30.0% | |
| AAGGAAAGAATACAAAGAGT+AGG | + | chr7.3:60670683-60670702 | MS.gene20096:CDS | 30.0% | |
| ACTAGAAATTGTTAGTATCC+TGG | + | chr7.3:60671578-60671597 | MS.gene20096:intron | 30.0% | |
| AGAATTAATCCTGATTGTGT+TGG | + | chr7.3:60671260-60671279 | MS.gene20096:intron | 30.0% | |
| ATAAGGAAAAGGAAACAAGA+TGG | - | chr7.3:60671902-60671921 | None:intergenic | 30.0% | |
| ATTCAAGGAACTGTTATAGA+GGG | + | chr7.3:60670734-60670753 | MS.gene20096:CDS | 30.0% | |
| GATTCTTTCACAATTCCAAA+AGG | + | chr7.3:60669707-60669726 | MS.gene20096:CDS | 30.0% | |
| GCGTAATAATTATCATCACT+AGG | - | chr7.3:60670157-60670176 | None:intergenic | 30.0% | |
| GCTATGATTTAAGAACTACA+TGG | + | chr7.3:60671474-60671493 | MS.gene20096:intron | 30.0% | |
| GGAAAAAAAGGGTGAAAATA+AGG | - | chr7.3:60671919-60671938 | None:intergenic | 30.0% | |
| TAATTATCAACAGGCTGATA+CGG | + | chr7.3:60670642-60670661 | MS.gene20096:CDS | 30.0% | |
| TCTTCTAAGCTATTAATCGA+GGG | - | chr7.3:60669914-60669933 | None:intergenic | 30.0% | |
| TTCTTCTAAGCTATTAATCG+AGG | - | chr7.3:60669915-60669934 | None:intergenic | 30.0% | |
| TTTCTATTGCAACTACTCAT+AGG | + | chr7.3:60670035-60670054 | MS.gene20096:CDS | 30.0% | |
| ! | AATTTCACGGATTTTGTCAT+CGG | - | chr7.3:60669639-60669658 | None:intergenic | 30.0% |
| ! | CTATTTTATCCAACACAATC+AGG | - | chr7.3:60671272-60671291 | None:intergenic | 30.0% |
| ! | GTTTCTGGACATTACAAATA+TGG | - | chr7.3:60671940-60671959 | None:intergenic | 30.0% |
| ! | TAACTGATCTTCACCAATTT+TGG | - | chr7.3:60672049-60672068 | None:intergenic | 30.0% |
| !! | CTAAGATTGGTTTCTCTATA+TGG | + | chr7.3:60671026-60671045 | MS.gene20096:intron | 30.0% |
| !! | TCGTTTTGTTATATACCGAA+GGG | + | chr7.3:60670208-60670227 | MS.gene20096:CDS | 30.0% |
| !! | TGAAATTGCAATTGTTTTGC+AGG | + | chr7.3:60671981-60672000 | MS.gene20096:intron | 30.0% |
| !!! | GTATTTTAGGATTAATGCGT+TGG | + | chr7.3:60670258-60670277 | MS.gene20096:CDS | 30.0% |
| !!! | GTTTCTGTTGATAATCCTTT+TGG | - | chr7.3:60669725-60669744 | None:intergenic | 30.0% |
| AAAACGGGGTGATAAAAATC+AGG | - | chr7.3:60671628-60671647 | None:intergenic | 35.0% | |
| AAATACGTGGATATCTGCAT+CGG | - | chr7.3:60670244-60670263 | None:intergenic | 35.0% | |
| AAGCAAATCCAATAAGACAC+AGG | - | chr7.3:60671132-60671151 | None:intergenic | 35.0% | |
| AATTATCAACAGGCTGATAC+GGG | + | chr7.3:60670643-60670662 | MS.gene20096:CDS | 35.0% | |
| ACAGAATATCGGTACTTCTT+CGG | + | chr7.3:60671517-60671536 | MS.gene20096:intron | 35.0% | |
| AGGTATCAAAGACCAAATGT+TGG | - | chr7.3:60671743-60671762 | None:intergenic | 35.0% | |
| AGTGGAAGATAACTCTGATA+TGG | - | chr7.3:60671875-60671894 | None:intergenic | 35.0% | |
| CATTCAAGGAACTGTTATAG+AGG | + | chr7.3:60670733-60670752 | MS.gene20096:CDS | 35.0% | |
| CGCATTAATCCTAAAATACG+TGG | - | chr7.3:60670257-60670276 | None:intergenic | 35.0% | |
| GAATACATATCCTTACATCC+AGG | + | chr7.3:60670840-60670859 | MS.gene20096:CDS | 35.0% | |
| GGGACTAAGATGATACATAA+AGG | + | chr7.3:60670664-60670683 | MS.gene20096:CDS | 35.0% | |
| GGTATCAAAGACCAAATGTT+GGG | - | chr7.3:60671742-60671761 | None:intergenic | 35.0% | |
| TAAAAATCAGCTTCATGCTG+CGG | + | chr7.3:60670369-60670388 | MS.gene20096:CDS | 35.0% | |
| TATGTGTTGTCAGACCAATT+TGG | - | chr7.3:60669839-60669858 | None:intergenic | 35.0% | |
| TGAGATACTTCGATAAGCTT+GGG | + | chr7.3:60669951-60669970 | MS.gene20096:CDS | 35.0% | |
| TTAATCGAGGGTTTCTTCTT+AGG | - | chr7.3:60669902-60669921 | None:intergenic | 35.0% | |
| TTATTACGCTGCATTGAATG+CGG | + | chr7.3:60670168-60670187 | MS.gene20096:CDS | 35.0% | |
| TTGAGATACTTCGATAAGCT+TGG | + | chr7.3:60669950-60669969 | MS.gene20096:CDS | 35.0% | |
| TTTCATGAGTACAAGTCTCA+TGG | - | chr7.3:60671966-60671985 | None:intergenic | 35.0% | |
| ! | ACATTTGGTCTTTGATACCT+CGG | + | chr7.3:60671743-60671762 | MS.gene20096:intron | 35.0% |
| ! | ACCAAATGTTGGGATAGTTT+TGG | - | chr7.3:60671732-60671751 | None:intergenic | 35.0% |
| ! | ATAACGGTGATTTGTGTTTG+GGG | - | chr7.3:60669550-60669569 | None:intergenic | 35.0% |
| ! | GATAACGGTGATTTGTGTTT+GGG | - | chr7.3:60669551-60669570 | None:intergenic | 35.0% |
| ! | GTGTCTTTTATTCTGTTTCC+TGG | + | chr7.3:60671703-60671722 | MS.gene20096:intron | 35.0% |
| ! | TCTTTTATTCTGTTTCCTGG+TGG | + | chr7.3:60671706-60671725 | MS.gene20096:intron | 35.0% |
| ! | TGCAGATATCCACGTATTTT+AGG | + | chr7.3:60670245-60670264 | MS.gene20096:CDS | 35.0% |
| !! | AACGTCTGAACGGATTTTAA+CGG | - | chr7.3:60669579-60669598 | None:intergenic | 35.0% |
| !! | CGAAAATGAAAGCACCAAAT+TGG | + | chr7.3:60669822-60669841 | MS.gene20096:CDS | 35.0% |
| !! | GTCGTTTTGTTATATACCGA+AGG | + | chr7.3:60670207-60670226 | MS.gene20096:CDS | 35.0% |
| !! | TGAACGGATTTTAACGGTTT+TGG | - | chr7.3:60669573-60669592 | None:intergenic | 35.0% |
| !! | TGTTAAGGAGTATCCAGATT+TGG | + | chr7.3:60670105-60670124 | MS.gene20096:CDS | 35.0% |
| !!! | AAGTGCTTTTTTTGAGAAGC+TGG | - | chr7.3:60669495-60669514 | None:intergenic | 35.0% |
| !!! | ATTGTTTTGACAACTGTGGT+GGG | + | chr7.3:60671441-60671460 | MS.gene20096:intron | 35.0% |
| !!! | GAGTGTTGGAGAGTTTTATT+CGG | + | chr7.3:60670606-60670625 | MS.gene20096:CDS | 35.0% |
| !!! | TATTGTTTTGACAACTGTGG+TGG | + | chr7.3:60671440-60671459 | MS.gene20096:intron | 35.0% |
| AATGAGCTTCCCGATGAATT+TGG | + | chr7.3:60672147-60672166 | MS.gene20096:CDS | 40.0% | |
| AGCACTATCACCAATAAGCA+TGG | - | chr7.3:60670815-60670834 | None:intergenic | 40.0% | |
| AGGAAACAAGATGGAAGTAG+TGG | - | chr7.3:60671893-60671912 | None:intergenic | 40.0% | |
| AGTATTCGACTGTGCAGAAT+TGG | + | chr7.3:60670428-60670447 | MS.gene20096:CDS | 40.0% | |
| ATCCGTGGTGTTTAGTTGAA+AGG | + | chr7.3:60671159-60671178 | MS.gene20096:intron | 40.0% | |
| ATTATCAACAGGCTGATACG+GGG | + | chr7.3:60670644-60670663 | MS.gene20096:CDS | 40.0% | |
| ATTGAGCATCCAATCAGGTT+CGG | - | chr7.3:60669774-60669793 | None:intergenic | 40.0% | |
| CAGTGTGATTCCATGCTTAT+TGG | + | chr7.3:60670802-60670821 | MS.gene20096:CDS | 40.0% | |
| CCATGAAGTATGCATGAACA+CGG | - | chr7.3:60670988-60671007 | None:intergenic | 40.0% | |
| CGAAAATTGAGCATCCAATC+AGG | - | chr7.3:60669779-60669798 | None:intergenic | 40.0% | |
| CGAATTTCTTGTCGTAATCG+CGG | - | chr7.3:60669670-60669689 | None:intergenic | 40.0% | |
| CGCGATTACGACAAGAAATT+CGG | + | chr7.3:60669668-60669687 | MS.gene20096:CDS | 40.0% | |
| GAAGCTCATTGAAGACATCA+CGG | - | chr7.3:60672137-60672156 | None:intergenic | 40.0% | |
| GAGATACTTCGATAAGCTTG+GGG | + | chr7.3:60669952-60669971 | MS.gene20096:CDS | 40.0% | |
| GCCAAAACTATCCCAACATT+TGG | + | chr7.3:60671728-60671747 | MS.gene20096:intron | 40.0% | |
| GTAAGAAGTCGAAGATATCG+TGG | + | chr7.3:60670518-60670537 | MS.gene20096:CDS | 40.0% | |
| GTTCGTAACTAACGTCTGAA+CGG | - | chr7.3:60669589-60669608 | None:intergenic | 40.0% | |
| TAGGATTAATGCGTTGGAGA+CGG | + | chr7.3:60670264-60670283 | MS.gene20096:CDS | 40.0% | |
| TAGGGCTGAGATTAAACGAA+TGG | - | chr7.3:60669747-60669766 | None:intergenic | 40.0% | |
| TCATAGGAAGACACTTGAGA+AGG | + | chr7.3:60670051-60670070 | MS.gene20096:CDS | 40.0% | |
| TCCAATAAGACACAGGTAAG+AGG | - | chr7.3:60671125-60671144 | None:intergenic | 40.0% | |
| TCCGTGGTGTTTAGTTGAAA+GGG | + | chr7.3:60671160-60671179 | MS.gene20096:intron | 40.0% | |
| TCCTCTTACCTGTGTCTTAT+TGG | + | chr7.3:60671121-60671140 | MS.gene20096:intron | 40.0% | |
| TGCATACTTCATGGACACTT+TGG | + | chr7.3:60670994-60671013 | MS.gene20096:intron | 40.0% | |
| TGGTTGCAGTCTATTGTTGT+TGG | + | chr7.3:60671775-60671794 | MS.gene20096:intron | 40.0% | |
| TTCGATTTCGGATGCTGTTA+AGG | + | chr7.3:60670090-60670109 | MS.gene20096:CDS | 40.0% | |
| TTGTCATCGGTAGATGAAGT+TGG | - | chr7.3:60669626-60669645 | None:intergenic | 40.0% | |
| ! | AGTATGGTGGAGTATTTGGA+AGG | + | chr7.3:60670325-60670344 | MS.gene20096:CDS | 40.0% |
| ! | ATTTGAGAGGACGTTGATTG+TGG | + | chr7.3:60670291-60670310 | MS.gene20096:CDS | 40.0% |
| ! | CCAATCAGGTTCGGATTTTA+GGG | - | chr7.3:60669765-60669784 | None:intergenic | 40.0% |
| ! | CGGTTGTTGAGTTGTATTGT+GGG | + | chr7.3:60670389-60670408 | MS.gene20096:CDS | 40.0% |
| ! | GAGCTTTTTGATGCTGAGTT+TGG | + | chr7.3:60671600-60671619 | MS.gene20096:intron | 40.0% |
| ! | GGATAACGGTGATTTGTGTT+TGG | - | chr7.3:60669552-60669571 | None:intergenic | 40.0% |
| ! | GGTTGTTGAGTTGTATTGTG+GGG | + | chr7.3:60670390-60670409 | MS.gene20096:CDS | 40.0% |
| ! | GTATGGTGGAGTATTTGGAA+GGG | + | chr7.3:60670326-60670345 | MS.gene20096:CDS | 40.0% |
| ! | GTATTTCTGCTGGACATTCA+AGG | + | chr7.3:60670719-60670738 | MS.gene20096:CDS | 40.0% |
| ! | TAACGGTGATTTGTGTTTGG+GGG | - | chr7.3:60669549-60669568 | None:intergenic | 40.0% |
| ! | TAGGAGTATGGTGGAGTATT+TGG | + | chr7.3:60670321-60670340 | MS.gene20096:CDS | 40.0% |
| ! | TCCAATCAGGTTCGGATTTT+AGG | - | chr7.3:60669766-60669785 | None:intergenic | 40.0% |
| ! | TCGAAGTATCTCAAAAGCTC+AGG | - | chr7.3:60669944-60669963 | None:intergenic | 40.0% |
| !! | AACTGTGGTGGGCAAATATA+CGG | + | chr7.3:60671452-60671471 | MS.gene20096:intron | 40.0% |
| !! | AGGAGTATCCAGATTTGGTT+AGG | + | chr7.3:60670110-60670129 | MS.gene20096:CDS | 40.0% |
| !! | ATATCGAAGGGTATTTCTGC+TGG | + | chr7.3:60670709-60670728 | MS.gene20096:CDS | 40.0% |
| !! | TTTGAGAAGCTGGTTTGAGT+GGG | - | chr7.3:60669485-60669504 | None:intergenic | 40.0% |
| !!! | AATGCGGCTGTTTTTAGTGA+CGG | + | chr7.3:60670184-60670203 | MS.gene20096:CDS | 40.0% |
| !!! | GGCTATTGTTTTGACAACTG+TGG | + | chr7.3:60671437-60671456 | MS.gene20096:intron | 40.0% |
| !!! | GGTTTTTGAGATTGGGAAGT+GGG | - | chr7.3:60669528-60669547 | None:intergenic | 40.0% |
| !!! | GTTTGGGGGTTTTTGAGATT+GGG | - | chr7.3:60669535-60669554 | None:intergenic | 40.0% |
| !!! | TGTTTGGGGGTTTTTGAGAT+TGG | - | chr7.3:60669536-60669555 | None:intergenic | 40.0% |
| !!! | TTTTGAGAAGCTGGTTTGAG+TGG | - | chr7.3:60669486-60669505 | None:intergenic | 40.0% |
| ACTCAGCATCAAAAAGCTCC+AGG | - | chr7.3:60671599-60671618 | None:intergenic | 45.0% | |
| ACTCATGAGCTTGAAGCTTG+AGG | + | chr7.3:60672185-60672204 | MS.gene20096:CDS | 45.0% | |
| ACTGTGCAGAATTGGTATGC+GGG | + | chr7.3:60670436-60670455 | MS.gene20096:CDS | 45.0% | |
| AGCACAACATGGTGAGAGAT+TGG | + | chr7.3:60671416-60671435 | MS.gene20096:intron | 45.0% | |
| AGGATTAATGCGTTGGAGAC+GGG | + | chr7.3:60670265-60670284 | MS.gene20096:CDS | 45.0% | |
| ATCAGCAAGAATTGAGCACG+AGG | + | chr7.3:60672014-60672033 | MS.gene20096:CDS | 45.0% | |
| ATCGGACACTTAACACCCTT+CGG | - | chr7.3:60670226-60670245 | None:intergenic | 45.0% | |
| ATTTGCTTGTCCTGTATCCG+TGG | + | chr7.3:60671144-60671163 | MS.gene20096:intron | 45.0% | |
| CAACTAAACACCACGGATAC+AGG | - | chr7.3:60671157-60671176 | None:intergenic | 45.0% | |
| CAAGCTTCAAGCTCATGAGT+TGG | - | chr7.3:60672185-60672204 | None:intergenic | 45.0% | |
| CAAGTCTCATGGCAAGTTTC+TGG | - | chr7.3:60671955-60671974 | None:intergenic | 45.0% | |
| CACCATGTTGTGCTTGTACT+AGG | - | chr7.3:60671410-60671429 | None:intergenic | 45.0% | |
| CCCCTTTCAACTAAACACCA+CGG | - | chr7.3:60671164-60671183 | None:intergenic | 45.0% | |
| CCCTAAAATCCGAACCTGAT+TGG | + | chr7.3:60669762-60669781 | MS.gene20096:CDS | 45.0% | |
| CCGTGGTGTTTAGTTGAAAG+GGG | + | chr7.3:60671161-60671180 | MS.gene20096:intron | 45.0% | |
| CCGTGTTCATGCATACTTCA+TGG | + | chr7.3:60670985-60671004 | MS.gene20096:intron | 45.0% | |
| CGGATACTTCCAAGTAATCG+CGG | - | chr7.3:60670563-60670582 | None:intergenic | 45.0% | |
| CTCATGAGCTTGAAGCTTGA+GGG | + | chr7.3:60672186-60672205 | MS.gene20096:CDS | 45.0% | |
| GACTGTGCAGAATTGGTATG+CGG | + | chr7.3:60670435-60670454 | MS.gene20096:CDS | 45.0% | |
| GAGGCTAGTACGTCCAAAAT+TGG | + | chr7.3:60672033-60672052 | MS.gene20096:CDS | 45.0% | |
| GTACTTCTTCGGCATACATG+TGG | + | chr7.3:60671528-60671547 | MS.gene20096:intron | 45.0% | |
| GTGATGAGAATGGGAAAGGT+GGG | + | chr7.3:60670458-60670477 | MS.gene20096:CDS | 45.0% | |
| TCATGAGCTTGAAGCTTGAG+GGG | + | chr7.3:60672187-60672206 | MS.gene20096:CDS | 45.0% | |
| TCGTGCTCAATTCTTGCTGA+TGG | - | chr7.3:60672015-60672034 | None:intergenic | 45.0% | |
| TCTTGTCGTAATCGCGGTTA+CGG | - | chr7.3:60669664-60669683 | None:intergenic | 45.0% | |
| TGCCTAGTACAAGCACAACA+TGG | + | chr7.3:60671405-60671424 | MS.gene20096:intron | 45.0% | |
| ! | AGATTGGGAAGTGGGTTTGA+TGG | - | chr7.3:60669520-60669539 | None:intergenic | 45.0% |
| ! | CATACATGTGGTCTAGTTCG+AGG | + | chr7.3:60671540-60671559 | MS.gene20096:intron | 45.0% |
| ! | CTGTTATAGAGGGCTTGTTC+AGG | + | chr7.3:60670744-60670763 | MS.gene20096:CDS | 45.0% |
| ! | GCGGTTGTTGAGTTGTATTG+TGG | + | chr7.3:60670388-60670407 | MS.gene20096:CDS | 45.0% |
| ! | GCTTGTTCAGGTTCAGTCTA+AGG | + | chr7.3:60670756-60670775 | MS.gene20096:CDS | 45.0% |
| ! | GTTGAGTTGTATTGTGGGGA+GGG | + | chr7.3:60670394-60670413 | MS.gene20096:CDS | 45.0% |
| ! | TGTTCAGGTTCAGTCTAAGG+CGG | + | chr7.3:60670759-60670778 | MS.gene20096:CDS | 45.0% |
| ! | TGTTGAGTTGTATTGTGGGG+AGG | + | chr7.3:60670393-60670412 | MS.gene20096:CDS | 45.0% |
| !! | GAAGTATCCGAGCGTTGTTT+TGG | + | chr7.3:60670573-60670592 | MS.gene20096:CDS | 45.0% |
| !! | TTGAGTGGGTTGTGGATGTA+AGG | - | chr7.3:60669471-60669490 | None:intergenic | 45.0% |
| !!! | ATGCGGCTGTTTTTAGTGAC+GGG | + | chr7.3:60670185-60670204 | MS.gene20096:CDS | 45.0% |
| !!! | GGGTTTTTGAGATTGGGAAG+TGG | - | chr7.3:60669529-60669548 | None:intergenic | 45.0% |
| !!! | TATCCGAGCGTTGTTTTGGA+GGG | + | chr7.3:60670577-60670596 | MS.gene20096:CDS | 45.0% |
| ACCTCGGAGCCAAATTCATC+GGG | - | chr7.3:60672159-60672178 | None:intergenic | 50.0% | |
| ACGAAGAGAGGATTGTGTGC+TGG | + | chr7.3:60670496-60670515 | MS.gene20096:CDS | 50.0% | |
| AGGAAGACACTTGAGAAGGC+TGG | + | chr7.3:60670055-60670074 | MS.gene20096:CDS | 50.0% | |
| CACCTCGGAGCCAAATTCAT+CGG | - | chr7.3:60672160-60672179 | None:intergenic | 50.0% | |
| CGCGGTTACGGAGAATTTCA+CGG | - | chr7.3:60669652-60669671 | None:intergenic | 50.0% | |
| GAAGATATCGTGGACTCAGG+TGG | + | chr7.3:60670528-60670547 | MS.gene20096:CDS | 50.0% | |
| GCAATGGCTGCTATGATCTC+TGG | + | chr7.3:60672105-60672124 | MS.gene20096:CDS | 50.0% | |
| GGATTAATGCGTTGGAGACG+GGG | + | chr7.3:60670266-60670285 | MS.gene20096:CDS | 50.0% | |
| GGTATGCGGGTGATGAGAAT+GGG | + | chr7.3:60670449-60670468 | MS.gene20096:CDS | 50.0% | |
| GGTGATGAGAATGGGAAAGG+TGG | + | chr7.3:60670457-60670476 | MS.gene20096:CDS | 50.0% | |
| GTCGAAGATATCGTGGACTC+AGG | + | chr7.3:60670525-60670544 | MS.gene20096:CDS | 50.0% | |
| TCACCCTCCAAAACAACGCT+CGG | - | chr7.3:60670583-60670602 | None:intergenic | 50.0% | |
| TGATACCTCGGTAGCTTCAC+TGG | + | chr7.3:60671755-60671774 | MS.gene20096:intron | 50.0% | |
| TGGTATGCGGGTGATGAGAA+TGG | + | chr7.3:60670448-60670467 | MS.gene20096:CDS | 50.0% | |
| TTGAAGCTTGAGGGGTCAGT+CGG | + | chr7.3:60672195-60672214 | MS.gene20096:CDS | 50.0% | |
| ! | TGAGAGGACGTTGATTGTGG+CGG | + | chr7.3:60670294-60670313 | MS.gene20096:CDS | 50.0% |
| ! | TTGGAGGGTGATGAGAGTGT+TGG | + | chr7.3:60670592-60670611 | MS.gene20096:CDS | 50.0% |
| !! | AAGCTGGTTTGAGTGGGTTG+TGG | - | chr7.3:60669479-60669498 | None:intergenic | 50.0% |
| !! | CGTTGATTGTGGCGGATGAT+AGG | + | chr7.3:60670302-60670321 | MS.gene20096:CDS | 50.0% |
| !! | GCTCATGAGTTGGTTCACCT+CGG | - | chr7.3:60672175-60672194 | None:intergenic | 50.0% |
| !! | TGTGGCGGATGATAGGAGTA+TGG | + | chr7.3:60670309-60670328 | MS.gene20096:CDS | 50.0% |
| !!! | GTATCCGAGCGTTGTTTTGG+AGG | + | chr7.3:60670576-60670595 | MS.gene20096:CDS | 50.0% |
| !!! | TTGGGATAGTTTTGGCCACC+AGG | - | chr7.3:60671724-60671743 | None:intergenic | 50.0% |
| AGACTGGGTCCGCGATTACT+TGG | + | chr7.3:60670551-60670570 | MS.gene20096:CDS | 55.0% | |
| GCGGGTGATGAGAATGGGAA+AGG | + | chr7.3:60670454-60670473 | MS.gene20096:CDS | 55.0% | |
| TGCAACCAGTGAAGCTACCG+AGG | - | chr7.3:60671763-60671782 | None:intergenic | 55.0% | |
| TGGAGACGGGGCAATTTGAG+AGG | + | chr7.3:60670278-60670297 | MS.gene20096:CDS | 55.0% | |
| ! | GGCGGATGATAGGAGTATGG+TGG | + | chr7.3:60670312-60670331 | MS.gene20096:CDS | 55.0% |
| ! | TCCCGATGAATTTGGCTCCG+AGG | + | chr7.3:60672155-60672174 | MS.gene20096:CDS | 55.0% |
| CGTGGACTCAGGTGGAGACT+GGG | + | chr7.3:60670536-60670555 | MS.gene20096:CDS | 60.0% | |
| TCGTGGACTCAGGTGGAGAC+TGG | + | chr7.3:60670535-60670554 | MS.gene20096:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 60669434 | 60672221 | 60669434 | ID=MS.gene20096 |
| chr7.3 | mRNA | 60669434 | 60672221 | 60669434 | ID=MS.gene20096.t1;Parent=MS.gene20096 |
| chr7.3 | exon | 60669434 | 60670861 | 60669434 | ID=MS.gene20096.t1.exon1;Parent=MS.gene20096.t1 |
| chr7.3 | CDS | 60669434 | 60670861 | 60669434 | ID=cds.MS.gene20096.t1;Parent=MS.gene20096.t1 |
| chr7.3 | exon | 60672003 | 60672221 | 60672003 | ID=MS.gene20096.t1.exon2;Parent=MS.gene20096.t1 |
| chr7.3 | CDS | 60672003 | 60672221 | 60672003 | ID=cds.MS.gene20096.t1;Parent=MS.gene20096.t1 |
| Gene Sequence |
| Protein sequence |
