Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32713.t1 | XP_003603276.1 | 95.1 | 552 | 27 | 0 | 1 | 552 | 1 | 552 | 0.00E+00 | 1102 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32713.t1 | O49931 | 88.9 | 552 | 58 | 2 | 1 | 552 | 5 | 553 | 7.4e-300 | 1030.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32713.t1 | G7J9S7 | 95.1 | 552 | 27 | 0 | 1 | 552 | 1 | 552 | 0.0e+00 | 1102.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene32713 | 0.849264 | 3.61E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene32713 | 0.8631 | 3.17E-64 | -1.69E-46 |
| MS.gene049369 | MS.gene32713 | 0.84434 | 8.03E-59 | -1.69E-46 |
| MS.gene049396 | MS.gene32713 | 0.830572 | 2.72E-55 | -1.69E-46 |
| MS.gene049480 | MS.gene32713 | 0.806511 | 7.94E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene32713 | 0.826585 | 2.50E-54 | -1.69E-46 |
| MS.gene049757 | MS.gene32713 | 0.844247 | 8.51E-59 | -1.69E-46 |
| MS.gene049805 | MS.gene32713 | 0.80115 | 1.03E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene32713 | 0.827578 | 1.45E-54 | -1.69E-46 |
| MS.gene050122 | MS.gene32713 | 0.805057 | 1.60E-49 | -1.69E-46 |
| MS.gene050133 | MS.gene32713 | -0.802777 | 4.78E-49 | -1.69E-46 |
| MS.gene050400 | MS.gene32713 | 0.846616 | 1.94E-59 | -1.69E-46 |
| MS.gene050426 | MS.gene32713 | -0.866891 | 2.05E-65 | -1.69E-46 |
| MS.gene050529 | MS.gene32713 | 0.806783 | 6.96E-50 | -1.69E-46 |
| MS.gene050553 | MS.gene32713 | 0.822205 | 2.68E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene32713 | 0.845525 | 3.85E-59 | -1.69E-46 |
| MS.gene050625 | MS.gene32713 | 0.804457 | 2.14E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene32713 | 0.913992 | 3.23E-84 | -1.69E-46 |
| MS.gene050747 | MS.gene32713 | 0.816457 | 5.48E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene32713 | 0.807771 | 4.29E-50 | -1.69E-46 |
| MS.gene05081 | MS.gene32713 | 0.831881 | 1.30E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene32713 | 0.818345 | 2.06E-52 | -1.69E-46 |
| MS.gene050971 | MS.gene32713 | 0.866152 | 3.51E-65 | -1.69E-46 |
| MS.gene05105 | MS.gene32713 | 0.884514 | 1.80E-71 | -1.69E-46 |
| MS.gene051360 | MS.gene32713 | 0.841303 | 5.16E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene32713 | 0.839595 | 1.44E-57 | -1.69E-46 |
| MS.gene051438 | MS.gene32713 | 0.811381 | 7.20E-51 | -1.69E-46 |
| MS.gene051521 | MS.gene32713 | 0.865435 | 5.92E-65 | -1.69E-46 |
| MS.gene051525 | MS.gene32713 | 0.89688 | 2.41E-76 | -1.69E-46 |
| MS.gene051582 | MS.gene32713 | 0.804449 | 2.15E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene32713 | 0.807864 | 4.10E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene32713 | 0.847348 | 1.22E-59 | -1.69E-46 |
| MS.gene051874 | MS.gene32713 | 0.810111 | 1.36E-50 | -1.69E-46 |
| MS.gene051941 | MS.gene32713 | 0.829328 | 5.47E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene32713 | -0.860131 | 2.56E-63 | -1.69E-46 |
| MS.gene052077 | MS.gene32713 | 0.828121 | 1.07E-54 | -1.69E-46 |
| MS.gene052128 | MS.gene32713 | -0.80635 | 8.59E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene32713 | 0.850998 | 1.18E-60 | -1.69E-46 |
| MS.gene052135 | MS.gene32713 | 0.851621 | 7.87E-61 | -1.69E-46 |
| MS.gene052136 | MS.gene32713 | 0.855206 | 7.37E-62 | -1.69E-46 |
| MS.gene052188 | MS.gene32713 | 0.869731 | 2.49E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene32713 | 0.854205 | 1.44E-61 | -1.69E-46 |
| MS.gene052310 | MS.gene32713 | 0.811003 | 8.70E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene32713 | 0.857731 | 1.34E-62 | -1.69E-46 |
| MS.gene052346 | MS.gene32713 | 0.893736 | 4.76E-75 | -1.69E-46 |
| MS.gene05240 | MS.gene32713 | -0.801002 | 1.11E-48 | -1.69E-46 |
| MS.gene052414 | MS.gene32713 | 0.887564 | 1.28E-72 | -1.69E-46 |
| MS.gene052421 | MS.gene32713 | 0.844837 | 5.90E-59 | -1.69E-46 |
| MS.gene052469 | MS.gene32713 | 0.874577 | 6.06E-68 | -1.69E-46 |
| MS.gene052481 | MS.gene32713 | 0.808126 | 3.61E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene32713 | 0.82802 | 1.13E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene32713 | 0.820448 | 6.82E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene32713 | 0.821326 | 4.29E-53 | -1.69E-46 |
| MS.gene052982 | MS.gene32713 | 0.845694 | 3.46E-59 | -1.69E-46 |
| MS.gene052999 | MS.gene32713 | 0.828521 | 8.59E-55 | -1.69E-46 |
| MS.gene053169 | MS.gene32713 | 0.881665 | 1.99E-70 | -1.69E-46 |
| MS.gene05316 | MS.gene32713 | 0.808992 | 2.36E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene32713 | 0.829949 | 3.87E-55 | -1.69E-46 |
| MS.gene05335 | MS.gene32713 | 0.822886 | 1.86E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene32713 | 0.851576 | 8.11E-61 | -1.69E-46 |
| MS.gene053479 | MS.gene32713 | 0.801406 | 9.14E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene32713 | 0.802703 | 4.95E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene32713 | 0.81298 | 3.23E-51 | -1.69E-46 |
| MS.gene053758 | MS.gene32713 | 0.831148 | 1.97E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene32713 | 0.823492 | 1.35E-53 | -1.69E-46 |
| MS.gene053889 | MS.gene32713 | 0.803222 | 3.86E-49 | -1.69E-46 |
| MS.gene053912 | MS.gene32713 | 0.844633 | 6.70E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene32713 | 0.826102 | 3.26E-54 | -1.69E-46 |
| MS.gene054107 | MS.gene32713 | 0.82831 | 9.65E-55 | -1.69E-46 |
| MS.gene054183 | MS.gene32713 | 0.820059 | 8.38E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene32713 | 0.840228 | 9.87E-58 | -1.69E-46 |
| MS.gene054556 | MS.gene32713 | 0.887052 | 2.00E-72 | -1.69E-46 |
| MS.gene054719 | MS.gene32713 | 0.816569 | 5.17E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene32713 | -0.815012 | 1.15E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene32713 | 0.855347 | 6.71E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene32713 | 0.833832 | 4.25E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene32713 | 0.876939 | 9.37E-69 | -1.69E-46 |
| MS.gene055224 | MS.gene32713 | 0.84303 | 1.80E-58 | -1.69E-46 |
| MS.gene055289 | MS.gene32713 | 0.803289 | 3.74E-49 | -1.69E-46 |
| MS.gene055369 | MS.gene32713 | 0.872567 | 2.88E-67 | -1.69E-46 |
| MS.gene055539 | MS.gene32713 | 0.895121 | 1.29E-75 | -1.69E-46 |
| MS.gene05553 | MS.gene32713 | 0.86106 | 1.34E-63 | -1.69E-46 |
| MS.gene05556 | MS.gene32713 | 0.847681 | 9.91E-60 | -1.69E-46 |
| MS.gene055666 | MS.gene32713 | 0.804591 | 2.01E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene32713 | 0.943197 | 1.86E-102 | -1.69E-46 |
| MS.gene055744 | MS.gene32713 | 0.94736 | 7.83E-106 | -1.69E-46 |
| MS.gene055909 | MS.gene32713 | 0.863871 | 1.83E-64 | -1.69E-46 |
| MS.gene055911 | MS.gene32713 | 0.865488 | 5.70E-65 | -1.69E-46 |
| MS.gene056166 | MS.gene32713 | 0.812988 | 3.21E-51 | -1.69E-46 |
| MS.gene056233 | MS.gene32713 | 0.819869 | 9.26E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene32713 | 0.827656 | 1.39E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene32713 | 0.819393 | 1.19E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene32713 | 0.868372 | 6.86E-66 | -1.69E-46 |
| MS.gene056514 | MS.gene32713 | 0.849091 | 4.04E-60 | -1.69E-46 |
| MS.gene05664 | MS.gene32713 | 0.815293 | 9.95E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene32713 | 0.859125 | 5.14E-63 | -1.69E-46 |
| MS.gene05666 | MS.gene32713 | 0.818014 | 2.44E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene32713 | 0.828453 | 8.91E-55 | -1.69E-46 |
| MS.gene056876 | MS.gene32713 | 0.804312 | 2.30E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene32713 | 0.840716 | 7.35E-58 | -1.69E-46 |
| MS.gene057019 | MS.gene32713 | 0.86623 | 3.32E-65 | -1.69E-46 |
| MS.gene057076 | MS.gene32713 | 0.836993 | 6.76E-57 | -1.69E-46 |
| MS.gene057124 | MS.gene32713 | 0.890682 | 7.90E-74 | -1.69E-46 |
| MS.gene057289 | MS.gene32713 | 0.80595 | 1.04E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene32713 | 0.811974 | 5.35E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene32713 | 0.874327 | 7.36E-68 | -1.69E-46 |
| MS.gene057448 | MS.gene32713 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene32713 | 0.854333 | 1.32E-61 | -1.69E-46 |
| MS.gene057749 | MS.gene32713 | 0.828395 | 9.21E-55 | -1.69E-46 |
| MS.gene057823 | MS.gene32713 | 0.834674 | 2.61E-56 | -1.69E-46 |
| MS.gene057825 | MS.gene32713 | 0.800188 | 1.62E-48 | -1.69E-46 |
| MS.gene057856 | MS.gene32713 | 0.811507 | 6.76E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene32713 | 0.878521 | 2.63E-69 | -1.69E-46 |
| MS.gene058090 | MS.gene32713 | 0.837548 | 4.87E-57 | -1.69E-46 |
| MS.gene058120 | MS.gene32713 | 0.86235 | 5.39E-64 | -1.69E-46 |
| MS.gene058130 | MS.gene32713 | 0.821449 | 4.01E-53 | -1.69E-46 |
| MS.gene058376 | MS.gene32713 | 0.854011 | 1.64E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene32713 | 0.804157 | 2.47E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene32713 | 0.863403 | 2.55E-64 | -1.69E-46 |
| MS.gene058448 | MS.gene32713 | 0.811244 | 7.71E-51 | -1.69E-46 |
| MS.gene058700 | MS.gene32713 | 0.907801 | 3.42E-81 | -1.69E-46 |
| MS.gene058838 | MS.gene32713 | 0.806002 | 1.02E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene32713 | 0.821533 | 3.84E-53 | -1.69E-46 |
| MS.gene058948 | MS.gene32713 | 0.877432 | 6.31E-69 | -1.69E-46 |
| MS.gene059011 | MS.gene32713 | 0.823448 | 1.38E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene32713 | 0.808243 | 3.41E-50 | -1.69E-46 |
| MS.gene059082 | MS.gene32713 | 0.826254 | 3.00E-54 | -1.69E-46 |
| MS.gene059366 | MS.gene32713 | 0.843267 | 1.56E-58 | -1.69E-46 |
| MS.gene059420 | MS.gene32713 | 0.875401 | 3.17E-68 | -1.69E-46 |
| MS.gene059462 | MS.gene32713 | 0.809963 | 1.46E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene32713 | 0.839212 | 1.81E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene32713 | 0.810608 | 1.06E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene32713 | 0.861682 | 8.64E-64 | -1.69E-46 |
| MS.gene059692 | MS.gene32713 | 0.845358 | 4.27E-59 | -1.69E-46 |
| MS.gene059695 | MS.gene32713 | 0.850625 | 1.50E-60 | -1.69E-46 |
| MS.gene059717 | MS.gene32713 | 0.817642 | 2.97E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene32713 | 0.801579 | 8.42E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene32713 | 0.868758 | 5.14E-66 | -1.69E-46 |
| MS.gene05984 | MS.gene32713 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene059933 | MS.gene32713 | 0.808455 | 3.07E-50 | -1.69E-46 |
| MS.gene059946 | MS.gene32713 | 0.826137 | 3.20E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene32713 | 0.895903 | 6.15E-76 | -1.69E-46 |
| MS.gene060403 | MS.gene32713 | 0.843269 | 1.55E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene32713 | 0.857261 | 1.84E-62 | -1.69E-46 |
| MS.gene060837 | MS.gene32713 | 0.87138 | 7.14E-67 | -1.69E-46 |
| MS.gene06092 | MS.gene32713 | 0.800988 | 1.11E-48 | -1.69E-46 |
| MS.gene06097 | MS.gene32713 | 0.813121 | 3.00E-51 | -1.69E-46 |
| MS.gene060986 | MS.gene32713 | 0.808153 | 3.56E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene32713 | 0.936422 | 1.78E-97 | -1.69E-46 |
| MS.gene061159 | MS.gene32713 | 0.821855 | 3.23E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32713.t1 | MTR_3g105820 | 95.652 | 552 | 24 | 0 | 1 | 552 | 1 | 552 | 0.0 | 1081 |
| MS.gene32713.t1 | MTR_4g057200 | 29.360 | 453 | 258 | 16 | 96 | 519 | 90 | 509 | 1.47e-54 | 193 |
| MS.gene32713.t1 | MTR_8g085790 | 27.345 | 501 | 283 | 14 | 84 | 551 | 43 | 495 | 1.02e-47 | 174 |
| MS.gene32713.t1 | MTR_8g085820 | 26.611 | 481 | 279 | 11 | 84 | 533 | 43 | 480 | 5.72e-46 | 169 |
| MS.gene32713.t1 | MTR_8g085840 | 26.400 | 500 | 290 | 13 | 84 | 551 | 67 | 520 | 1.23e-45 | 168 |
| MS.gene32713.t1 | MTR_8g085790 | 31.661 | 319 | 189 | 8 | 84 | 380 | 67 | 378 | 2.23e-42 | 156 |
| MS.gene32713.t1 | MTR_1g030480 | 26.176 | 340 | 205 | 14 | 99 | 421 | 210 | 520 | 2.09e-20 | 95.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32713.t1 | AT2G24820 | 77.755 | 490 | 102 | 4 | 64 | 552 | 56 | 539 | 0.0 | 793 |
| MS.gene32713.t1 | AT3G44880 | 28.423 | 577 | 306 | 23 | 6 | 546 | 22 | 527 | 2.09e-50 | 182 |
| MS.gene32713.t1 | AT4G25650 | 27.556 | 450 | 254 | 15 | 96 | 510 | 79 | 491 | 2.15e-43 | 162 |
| MS.gene32713.t1 | AT4G25650 | 26.205 | 477 | 249 | 16 | 96 | 510 | 79 | 514 | 8.31e-40 | 152 |
| MS.gene32713.t1 | AT1G44446 | 25.959 | 339 | 207 | 14 | 99 | 421 | 116 | 426 | 4.49e-23 | 102 |
| MS.gene32713.t1 | AT1G44446 | 25.959 | 339 | 207 | 14 | 99 | 421 | 218 | 528 | 1.48e-22 | 101 |
| MS.gene32713.t1 | AT1G44446 | 27.076 | 277 | 164 | 12 | 99 | 361 | 218 | 470 | 2.88e-20 | 94.7 |
| MS.gene32713.t1 | AT1G44446 | 29.944 | 177 | 109 | 6 | 99 | 270 | 218 | 384 | 5.15e-17 | 84.0 |
Find 147 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATATCTATTTGCTAAATT+TGG | 0.091375 | 3.3:-87075180 | None:intergenic |
| CTTTCAAAAGAATTTCATTT+TGG | 0.099582 | 3.3:-87074927 | None:intergenic |
| TGAATACAACAAACTTTATT+AGG | 0.168312 | 3.3:+87075400 | MS.gene32713:CDS |
| GCATTGGCAATTCTTGTATC+TGG | 0.209307 | 3.3:+87075297 | MS.gene32713:CDS |
| GGGATTCTCAAGGTGTTATT+TGG | 0.225677 | 3.3:+87074377 | MS.gene32713:CDS |
| CACGGGATGCCATATCATTT+TGG | 0.253652 | 3.3:+87075039 | MS.gene32713:CDS |
| TCAGTGGTCTGTTCCTTTGT+AGG | 0.259166 | 3.3:+87074764 | MS.gene32713:CDS |
| ATTTAGCAAATAGATATTTC+AGG | 0.298772 | 3.3:+87075184 | MS.gene32713:CDS |
| CTTGTGTTCTACAAAATAAC+AGG | 0.302734 | 3.3:+87074707 | MS.gene32713:CDS |
| TATTCTACTGGAAAACTTGA+TGG | 0.338578 | 3.3:+87074516 | MS.gene32713:CDS |
| TCAGGAAACAGTTTCACTAT+TGG | 0.342040 | 3.3:-87074844 | None:intergenic |
| ATGCAAAGCAAAATGAGTTT+TGG | 0.346312 | 3.3:-87072961 | None:intergenic |
| GCACCTGCTGGACTTGTTGC+AGG | 0.354157 | 3.3:+87075108 | MS.gene32713:CDS |
| CCATTCCTCTTTCCAATCAT+AGG | 0.358558 | 3.3:-87073213 | None:intergenic |
| GGATTCTCAAGGTGTTATTT+GGG | 0.369826 | 3.3:+87074378 | MS.gene32713:CDS |
| TCAATTACAGCAGGCTCTTT+AGG | 0.378521 | 3.3:-87075081 | None:intergenic |
| CTGTTCCTTTGTAGGCCAAC+TGG | 0.383836 | 3.3:+87074772 | MS.gene32713:CDS |
| AGTCCAAAGGAGTATTTGTT+TGG | 0.385986 | 3.3:-87073000 | None:intergenic |
| TTCTGATGGAAGTACCATTC+AGG | 0.391509 | 3.3:-87074862 | None:intergenic |
| GCCTAACTTCTTACGGTTTG+AGG | 0.395482 | 3.3:+87074681 | MS.gene32713:CDS |
| GTTGAGATTGAAACTGAAAC+TGG | 0.401389 | 3.3:-87073033 | None:intergenic |
| CGAACTGATAGAGGGTTTGC+AGG | 0.406206 | 3.3:+87074628 | MS.gene32713:CDS |
| AGTAGAATAGAATGATCATA+TGG | 0.408492 | 3.3:-87074502 | None:intergenic |
| ATATGATCATTCTATTCTAC+TGG | 0.410613 | 3.3:+87074504 | MS.gene32713:CDS |
| TCTGAAGGCCAGTTGATTGA+TGG | 0.416371 | 3.3:+87074131 | MS.gene32713:CDS |
| CTCAAGGTGTTATTTGGGTA+TGG | 0.419926 | 3.3:+87074383 | MS.gene32713:CDS |
| TCCATGCTGATAGTGAGGTT+TGG | 0.420466 | 3.3:+87074805 | MS.gene32713:CDS |
| ACCCCTGCGTTCTTGCTCAC+TGG | 0.427222 | 3.3:-87073174 | None:intergenic |
| GGCTGTTGCGTTAGCTGCAT+TGG | 0.431876 | 3.3:+87075281 | MS.gene32713:CDS |
| CCAAGTTTGAAAAGCTTTGA+CGG | 0.431998 | 3.3:-87075238 | None:intergenic |
| GTGCTGTGACCAAAATGATA+TGG | 0.432114 | 3.3:-87075048 | None:intergenic |
| GAGAACTTGCAGCCTATGAT+TGG | 0.435775 | 3.3:+87073201 | MS.gene32713:CDS |
| CATCCAAACAAATACTCCTT+TGG | 0.438298 | 3.3:+87072997 | MS.gene32713:CDS |
| TAGAGGGTTTGCAGGTTGGT+GGG | 0.438638 | 3.3:+87074636 | MS.gene32713:CDS |
| GCTGCATCAACTGTACTTGA+TGG | 0.444392 | 3.3:+87073119 | MS.gene32713:CDS |
| CAAGCCTTCCATCAATCAAC+TGG | 0.448979 | 3.3:-87074139 | None:intergenic |
| CGAATTGCCATCCATGATAC+AGG | 0.448989 | 3.3:-87074166 | None:intergenic |
| TCTGTTCTATCATGCGAGAT+TGG | 0.453393 | 3.3:-87074553 | None:intergenic |
| TTCAGGTATAGTTCCTTTGT+CGG | 0.454673 | 3.3:-87074958 | None:intergenic |
| TGTCTGATGATCTTAAATTC+AGG | 0.456895 | 3.3:-87074975 | None:intergenic |
| CAAAGGAGTATTTGTTTGGA+TGG | 0.457186 | 3.3:-87072996 | None:intergenic |
| CTGATAGAGGGTTTGCAGGT+TGG | 0.459478 | 3.3:+87074632 | MS.gene32713:CDS |
| CGCAACAGCCACAGCCGAAA+GGG | 0.460635 | 3.3:-87075268 | None:intergenic |
| GTACTAAGCCTAACTTCTTA+CGG | 0.464513 | 3.3:+87074674 | MS.gene32713:CDS |
| ATGGATTTCCCTTGTCCAGT+TGG | 0.465078 | 3.3:-87074787 | None:intergenic |
| TCTGCATCCCTATGCTCTGT+TGG | 0.465909 | 3.3:+87075348 | MS.gene32713:CDS |
| AAACCTTGCTTGCATTCTGA+TGG | 0.468051 | 3.3:-87074876 | None:intergenic |
| TTGAAACTGAAACTGGAAGA+TGG | 0.472271 | 3.3:-87073026 | None:intergenic |
| ATAGAGGGTTTGCAGGTTGG+TGG | 0.475534 | 3.3:+87074635 | MS.gene32713:CDS |
| GCCTCAAACCGTAAGAAGTT+AGG | 0.477957 | 3.3:-87074682 | None:intergenic |
| TTTGAGAACTTTGCAAGGCC+AGG | 0.480628 | 3.3:+87074448 | MS.gene32713:CDS |
| TCAGCTTCCTCACCTGCAAA+GGG | 0.482663 | 3.3:+87075135 | MS.gene32713:CDS |
| GTAATTGAACATGCACCTGC+TGG | 0.483939 | 3.3:+87075096 | MS.gene32713:CDS |
| CTTTGTAGGCCAACTGGACA+AGG | 0.485841 | 3.3:+87074778 | MS.gene32713:CDS |
| ACACATGGGTTGCTGAATAC+AGG | 0.486315 | 3.3:+87074995 | MS.gene32713:CDS |
| CATTGGCAATTCTTGTATCT+GGG | 0.491960 | 3.3:+87075298 | MS.gene32713:CDS |
| ATAGGGATGCAGATGCCAAC+AGG | 0.493759 | 3.3:-87075338 | None:intergenic |
| GTGACAGAACGAACTGATAG+AGG | 0.493826 | 3.3:+87074619 | MS.gene32713:CDS |
| TAGTGAAACTGTTTCCTGAA+TGG | 0.500632 | 3.3:+87074848 | MS.gene32713:CDS |
| CTGCATCAACTGTACTTGAT+GGG | 0.506544 | 3.3:+87073120 | MS.gene32713:CDS |
| AGAGGGTTTGCAGGTTGGTG+GGG | 0.507806 | 3.3:+87074637 | MS.gene32713:CDS |
| ATCAGCTTCCTCACCTGCAA+AGG | 0.509289 | 3.3:+87075134 | MS.gene32713:CDS |
| ACGCAACAGCCACAGCCGAA+AGG | 0.521750 | 3.3:-87075269 | None:intergenic |
| TGCGAGATTGGAATATGAGC+AGG | 0.522604 | 3.3:-87074541 | None:intergenic |
| CATTCTTAGTGAGGTACAAA+GGG | 0.524490 | 3.3:-87073238 | None:intergenic |
| TTCAGTTTCAATCTCAACAA+AGG | 0.530425 | 3.3:+87073038 | MS.gene32713:CDS |
| ATGAAGATCGGTGTCCTCAC+AGG | 0.533880 | 3.3:+87073345 | MS.gene32713:CDS |
| GAAAGAGAAGGTTCCGACAA+AGG | 0.535987 | 3.3:+87074945 | MS.gene32713:CDS |
| TTGATTTCACTCCATGGCGT+TGG | 0.537003 | 3.3:+87072917 | None:intergenic |
| AGCTTCCTCACCTGCAAAGG+GGG | 0.537835 | 3.3:+87075137 | MS.gene32713:CDS |
| AGGCTTGAATGCCTGTATCA+TGG | 0.538330 | 3.3:+87074155 | MS.gene32713:CDS |
| TACTTGATGGGGAAGAAGAT+CGG | 0.540392 | 3.3:+87073132 | MS.gene32713:CDS |
| TGAAACTGAAACTGGAAGAT+GGG | 0.541256 | 3.3:-87073025 | None:intergenic |
| ATGCTGATAGTGAGGTTTGG+AGG | 0.541567 | 3.3:+87074808 | MS.gene32713:CDS |
| TTGAGAACTTTGCAAGGCCA+GGG | 0.544089 | 3.3:+87074449 | MS.gene32713:CDS |
| CTGCGTTCTTGCTCACTGGA+AGG | 0.546061 | 3.3:-87073170 | None:intergenic |
| CTTGTCCAGTTGGCCTACAA+AGG | 0.550809 | 3.3:-87074777 | None:intergenic |
| AGGAGTATTTGTTTGGATGG+TGG | 0.552067 | 3.3:-87072993 | None:intergenic |
| GTACCACACGATGCACCACT+TGG | 0.552643 | 3.3:+87073260 | MS.gene32713:CDS |
| CAAATGTCAGTAAAATACCT+TGG | 0.554742 | 3.3:+87074425 | MS.gene32713:CDS |
| ATACACTCCAACAGAGCATA+GGG | 0.555383 | 3.3:-87075355 | None:intergenic |
| ACATTCTTAGTGAGGTACAA+AGG | 0.557836 | 3.3:-87073239 | None:intergenic |
| TTCTTGTATCTGGGAGACAA+TGG | 0.561754 | 3.3:+87075307 | MS.gene32713:CDS |
| GTTTGTTGTATTCAATGCAA+TGG | 0.564073 | 3.3:-87075391 | None:intergenic |
| TGCCATCTTTAAACAAAACA+AGG | 0.564133 | 3.3:-87073304 | None:intergenic |
| AGTCCTGCAACAAGTCCAGC+AGG | 0.564418 | 3.3:-87075111 | None:intergenic |
| CAAACTTTATTAGGACACAT+AGG | 0.568168 | 3.3:+87075409 | MS.gene32713:CDS |
| TCTCGCATGATAGAACAGAT+TGG | 0.569347 | 3.3:+87074557 | MS.gene32713:CDS |
| TACAGCAGGCTCTTTAGGCA+AGG | 0.570711 | 3.3:-87075076 | None:intergenic |
| GGATGGCAATTCGAAGGCGA+AGG | 0.570725 | 3.3:+87074176 | MS.gene32713:CDS |
| AGATTCAATGCTATGAAGAT+CGG | 0.573811 | 3.3:+87073333 | MS.gene32713:CDS |
| CATACACTCCAACAGAGCAT+AGG | 0.573882 | 3.3:-87075356 | None:intergenic |
| TCAAGCAGAAGAAAGCATGC+AGG | 0.578242 | 3.3:+87073068 | MS.gene32713:CDS |
| CTTCCATCAGAATGCAAGCA+AGG | 0.579730 | 3.3:+87074873 | MS.gene32713:CDS |
| GTTGAAACATCTTGAAACCC+TGG | 0.581335 | 3.3:-87074466 | None:intergenic |
| CTTGCAAAGTTCTCAAACCA+AGG | 0.582584 | 3.3:-87074442 | None:intergenic |
| GGTGCATGTTCAATTACAGC+AGG | 0.585100 | 3.3:-87075090 | None:intergenic |
| GGGTTGCTGAATACAGGAAG+TGG | 0.586558 | 3.3:+87075001 | MS.gene32713:CDS |
| TCCAAACCTCACTATCAGCA+TGG | 0.589532 | 3.3:-87074806 | None:intergenic |
| TTCCAGTGAGCAAGAACGCA+GGG | 0.590208 | 3.3:+87073172 | MS.gene32713:CDS |
| TGGAAGATGGGTTAGTCCAA+AGG | 0.593475 | 3.3:-87073013 | None:intergenic |
| TGGATGGACAAAGTGGGACA+CGG | 0.594552 | 3.3:+87075021 | MS.gene32713:CDS |
| CCTATGATTGGAAAGAGGAA+TGG | 0.595339 | 3.3:+87073213 | MS.gene32713:CDS |
| TGTTAAAACATATGAAGTGA+GGG | 0.595344 | 3.3:+87074357 | MS.gene32713:CDS |
| GTAGAATAGAATGATCATAT+GGG | 0.601415 | 3.3:-87074501 | None:intergenic |
| TGCAGCCTATGATTGGAAAG+AGG | 0.602118 | 3.3:+87073208 | MS.gene32713:CDS |
| GAAATGTGTTAAGATACCTC+AGG | 0.602755 | 3.3:+87074199 | MS.gene32713:CDS |
| TATCATGGATGGCAATTCGA+AGG | 0.603135 | 3.3:+87074170 | MS.gene32713:CDS |
| AGAAGATCGGAAAGTTCTAG+TGG | 0.603385 | 3.3:+87073145 | MS.gene32713:CDS |
| AAGGCCAGTTGATTGATGGA+AGG | 0.603495 | 3.3:+87074135 | MS.gene32713:CDS |
| AGTATTTGTTTGGATGGTGG+AGG | 0.603781 | 3.3:-87072990 | None:intergenic |
| CTTGGTTTGAGAACTTTGCA+AGG | 0.608245 | 3.3:+87074443 | MS.gene32713:CDS |
| ATTTAAGATCATCAGACACA+TGG | 0.611628 | 3.3:+87074980 | MS.gene32713:CDS |
| TGCTGAATACAGGAAGTGGA+TGG | 0.613748 | 3.3:+87075005 | MS.gene32713:CDS |
| AAATGGATTTACCAACGCCA+TGG | 0.614476 | 3.3:-87072928 | None:intergenic |
| CTTCCAGTGAGCAAGAACGC+AGG | 0.616535 | 3.3:+87073171 | MS.gene32713:CDS |
| TGCATCAACTGTACTTGATG+GGG | 0.616664 | 3.3:+87073121 | MS.gene32713:CDS |
| TGCAGGGTATGTCACCGCCA+CGG | 0.619960 | 3.3:+87073085 | MS.gene32713:CDS |
| GGATGGACAAAGTGGGACAC+GGG | 0.620612 | 3.3:+87075022 | MS.gene32713:CDS |
| GGTGAAATAAACTACTTCAG+TGG | 0.621651 | 3.3:+87074748 | MS.gene32713:CDS |
| CAAGCAGAAGAAAGCATGCA+GGG | 0.625644 | 3.3:+87073069 | MS.gene32713:CDS |
| GTGTTAAAACATATGAAGTG+AGG | 0.626515 | 3.3:+87074356 | MS.gene32713:CDS |
| GATGGCAATTCGAAGGCGAA+GGG | 0.627130 | 3.3:+87074177 | MS.gene32713:CDS |
| AGGTTAGCAAAACTATCTGA+AGG | 0.627154 | 3.3:+87074116 | MS.gene32713:intron |
| ACAATGGAAAGTCCTCCTGT+TGG | 0.632385 | 3.3:+87075323 | MS.gene32713:CDS |
| CAGGAAGTGGATGGACAAAG+TGG | 0.633627 | 3.3:+87075014 | MS.gene32713:CDS |
| TTTAAGATCATCAGACACAT+GGG | 0.641224 | 3.3:+87074981 | MS.gene32713:CDS |
| GCTTCCTCACCTGCAAAGGG+GGG | 0.641330 | 3.3:+87075138 | MS.gene32713:CDS |
| TGACAGAACGAACTGATAGA+GGG | 0.642389 | 3.3:+87074620 | MS.gene32713:CDS |
| TGCAGCTTTGACATCTGCCG+TGG | 0.643956 | 3.3:-87073102 | None:intergenic |
| TTGAATGCCTGTATCATGGA+TGG | 0.646528 | 3.3:+87074159 | MS.gene32713:CDS |
| AGCTTTGACATCTGCCGTGG+CGG | 0.646677 | 3.3:-87073099 | None:intergenic |
| GGAAATCCATGCTGATAGTG+AGG | 0.648025 | 3.3:+87074800 | MS.gene32713:CDS |
| TTTGTAGGCCAACTGGACAA+GGG | 0.655506 | 3.3:+87074779 | MS.gene32713:CDS |
| CGTGTGGTACATTCTTAGTG+AGG | 0.668970 | 3.3:-87073247 | None:intergenic |
| TCAAACACTGTGAGACCAAG+TGG | 0.669069 | 3.3:-87073275 | None:intergenic |
| GAAGATCGGAAAGTTCTAGT+GGG | 0.669887 | 3.3:+87073146 | MS.gene32713:CDS |
| AGGAAGTGGATGGACAAAGT+GGG | 0.674817 | 3.3:+87075015 | MS.gene32713:CDS |
| CAGCTTCCTCACCTGCAAAG+GGG | 0.676647 | 3.3:+87075136 | MS.gene32713:CDS |
| TATGAAGTGAGGGATTCTCA+AGG | 0.679527 | 3.3:+87074367 | MS.gene32713:CDS |
| TTGTGTTCTACAAAATAACA+GGG | 0.682628 | 3.3:+87074708 | MS.gene32713:CDS |
| TAAATTAAAACCAACCTGTG+AGG | 0.684077 | 3.3:-87073359 | None:intergenic |
| AGACCAAGTGGTGCATCGTG+TGG | 0.684416 | 3.3:-87073263 | None:intergenic |
| TGGTGGGGACGAGAGAAAGA+CGG | 0.685767 | 3.3:+87074652 | MS.gene32713:CDS |
| GGGATGCAGATGCCAACAGG+AGG | 0.688384 | 3.3:-87075335 | None:intergenic |
| TCCAGTGAGCAAGAACGCAG+GGG | 0.708243 | 3.3:+87073173 | MS.gene32713:CDS |
| AGTTTGAAAAGCTTTGACGG+CGG | 0.714074 | 3.3:-87075235 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGTAAGTAATTGAAAT+TGG | - | chr3.3:87073916-87073935 | None:intergenic | 15.0% |
| !!! | AAATATCTATTTGCTAAATT+TGG | - | chr3.3:87075183-87075202 | None:intergenic | 15.0% |
| !!! | TTTCAAAAGAATTTCATTTT+GGG | - | chr3.3:87074929-87074948 | None:intergenic | 15.0% |
| !! | AATTATGAACTCTTACTTAT+GGG | - | chr3.3:87073444-87073463 | None:intergenic | 20.0% |
| !! | ACATACTATCATTATTCATT+AGG | - | chr3.3:87073892-87073911 | None:intergenic | 20.0% |
| !! | AGATCTATATTACTCTATTT+AGG | + | chr3.3:87073671-87073690 | MS.gene32713:intron | 20.0% |
| !! | ATTGGTATTAATAAAGTTAG+TGG | + | chr3.3:87073702-87073721 | MS.gene32713:intron | 20.0% |
| !! | ATTTAGCAAATAGATATTTC+AGG | + | chr3.3:87075184-87075203 | MS.gene32713:CDS | 20.0% |
| !! | TCTATTTAGGAATAAGATAT+TGG | + | chr3.3:87073684-87073703 | MS.gene32713:intron | 20.0% |
| !! | TGAATACAACAAACTTTATT+AGG | + | chr3.3:87075400-87075419 | MS.gene32713:CDS | 20.0% |
| !! | TTAATATTTGTATCTTTCCT+AGG | + | chr3.3:87073850-87073869 | MS.gene32713:intron | 20.0% |
| !!! | CTTTCAAAAGAATTTCATTT+TGG | - | chr3.3:87074930-87074949 | None:intergenic | 20.0% |
| ! | AAAAAATAAACCCGAACATT+AGG | - | chr3.3:87073587-87073606 | None:intergenic | 25.0% |
| ! | AGGGAAATTGTAGATAAAAA+TGG | + | chr3.3:87074727-87074746 | MS.gene32713:CDS | 25.0% |
| ! | AGTAGAATAGAATGATCATA+TGG | - | chr3.3:87074505-87074524 | None:intergenic | 25.0% |
| ! | ATAAATATTCTCACGTTAAC+TGG | + | chr3.3:87073977-87073996 | MS.gene32713:intron | 25.0% |
| ! | ATATCATGAATGTCCTTATA+TGG | + | chr3.3:87074253-87074272 | MS.gene32713:intron | 25.0% |
| ! | ATATGATCATTCTATTCTAC+TGG | + | chr3.3:87074504-87074523 | MS.gene32713:CDS | 25.0% |
| ! | ATCAAACCATCTAAATTGAT+TGG | + | chr3.3:87074019-87074038 | MS.gene32713:intron | 25.0% |
| ! | CAATTATGAACTCTTACTTA+TGG | - | chr3.3:87073445-87073464 | None:intergenic | 25.0% |
| ! | CCTGAATCATGTAAAATATA+AGG | - | chr3.3:87074099-87074118 | None:intergenic | 25.0% |
| ! | GTAGAATAGAATGATCATAT+GGG | - | chr3.3:87074504-87074523 | None:intergenic | 25.0% |
| ! | TATAAGGACATTCATGATAT+AGG | - | chr3.3:87074253-87074272 | None:intergenic | 25.0% |
| ! | TGTTAAAACATATGAAGTGA+GGG | + | chr3.3:87074357-87074376 | MS.gene32713:CDS | 25.0% |
| ! | TTGTGTTCTACAAAATAACA+GGG | + | chr3.3:87074708-87074727 | MS.gene32713:CDS | 25.0% |
| !! | CCTTATATTTTACATGATTC+AGG | + | chr3.3:87074096-87074115 | MS.gene32713:intron | 25.0% |
| !!! | AACCTTGTTTTGTTTAAAGA+TGG | + | chr3.3:87073302-87073321 | MS.gene32713:CDS | 25.0% |
| !!! | TGAAATTCTTTTGAAAGAGA+AGG | + | chr3.3:87074933-87074952 | MS.gene32713:CDS | 25.0% |
| AGATTCAATGCTATGAAGAT+CGG | + | chr3.3:87073333-87073352 | MS.gene32713:CDS | 30.0% | |
| ATGATGTGAAATCAAACTCA+AGG | + | chr3.3:87073613-87073632 | MS.gene32713:intron | 30.0% | |
| CAAACTTTATTAGGACACAT+AGG | + | chr3.3:87075409-87075428 | MS.gene32713:CDS | 30.0% | |
| CAAATGTCAGTAAAATACCT+TGG | + | chr3.3:87074425-87074444 | MS.gene32713:CDS | 30.0% | |
| CAGTAGCAGTATTGTAAATA+AGG | - | chr3.3:87073760-87073779 | None:intergenic | 30.0% | |
| CTGTATACTGTGTATATACT+TGG | + | chr3.3:87073557-87073576 | MS.gene32713:intron | 30.0% | |
| CTTGTGTTCTACAAAATAAC+AGG | + | chr3.3:87074707-87074726 | MS.gene32713:CDS | 30.0% | |
| GTGTTAAAACATATGAAGTG+AGG | + | chr3.3:87074356-87074375 | MS.gene32713:CDS | 30.0% | |
| TAAATTAAAACCAACCTGTG+AGG | - | chr3.3:87073362-87073381 | None:intergenic | 30.0% | |
| TACTTGCCAATCAATTTAGA+TGG | - | chr3.3:87074028-87074047 | None:intergenic | 30.0% | |
| TATTCTACTGGAAAACTTGA+TGG | + | chr3.3:87074516-87074535 | MS.gene32713:CDS | 30.0% | |
| TCATTATCAGACAAACACAT+TGG | - | chr3.3:87073652-87073671 | None:intergenic | 30.0% | |
| TGCCATCTTTAAACAAAACA+AGG | - | chr3.3:87073307-87073326 | None:intergenic | 30.0% | |
| TGTCTGATGATCTTAAATTC+AGG | - | chr3.3:87074978-87074997 | None:intergenic | 30.0% | |
| TGTTAGCATCAAACCATATA+AGG | - | chr3.3:87074269-87074288 | None:intergenic | 30.0% | |
| TTCAGTTTCAATCTCAACAA+AGG | + | chr3.3:87073038-87073057 | MS.gene32713:CDS | 30.0% | |
| ! | AAGGTTTTTGAACAAGACAT+GGG | + | chr3.3:87074892-87074911 | MS.gene32713:CDS | 30.0% |
| ! | ATGCAAAGCAAAATGAGTTT+TGG | - | chr3.3:87072964-87072983 | None:intergenic | 30.0% |
| ! | ATTTAAGATCATCAGACACA+TGG | + | chr3.3:87074980-87074999 | MS.gene32713:CDS | 30.0% |
| ! | TTGAGTTTGATTTCACATCA+TGG | - | chr3.3:87073614-87073633 | None:intergenic | 30.0% |
| ! | TTTAAGATCATCAGACACAT+GGG | + | chr3.3:87074981-87075000 | MS.gene32713:CDS | 30.0% |
| ! | TTTTATTCCTTTCACAATGC+TGG | + | chr3.3:87074067-87074086 | MS.gene32713:intron | 30.0% |
| !! | AAAGCAAAATGAGTTTTGGT+GGG | - | chr3.3:87072960-87072979 | None:intergenic | 30.0% |
| !! | CAAGGTATTTTACTGACATT+TGG | - | chr3.3:87074427-87074446 | None:intergenic | 30.0% |
| !! | GTTTGTTGTATTCAATGCAA+TGG | - | chr3.3:87075394-87075413 | None:intergenic | 30.0% |
| !!! | CACTTCATATGTTTTAACAC+AGG | - | chr3.3:87074356-87074375 | None:intergenic | 30.0% |
| !!! | CTGTTATTTTGTAGAACACA+AGG | - | chr3.3:87074709-87074728 | None:intergenic | 30.0% |
| AACTTGGAAAAATGCCCTTT+CGG | + | chr3.3:87075254-87075273 | MS.gene32713:CDS | 35.0% | |
| AATCACATAGCATGCAACTT+TGG | - | chr3.3:87073474-87073493 | None:intergenic | 35.0% | |
| ACATTCTTAGTGAGGTACAA+AGG | - | chr3.3:87073242-87073261 | None:intergenic | 35.0% | |
| AGGTTAGCAAAACTATCTGA+AGG | + | chr3.3:87074116-87074135 | MS.gene32713:intron | 35.0% | |
| CATCCAAACAAATACTCCTT+TGG | + | chr3.3:87072997-87073016 | MS.gene32713:CDS | 35.0% | |
| CATTCTTAGTGAGGTACAAA+GGG | - | chr3.3:87073241-87073260 | None:intergenic | 35.0% | |
| CATTGGCAATTCTTGTATCT+GGG | + | chr3.3:87075298-87075317 | MS.gene32713:CDS | 35.0% | |
| GAAATGTGTTAAGATACCTC+AGG | + | chr3.3:87074199-87074218 | MS.gene32713:CDS | 35.0% | |
| GGTGAAATAAACTACTTCAG+TGG | + | chr3.3:87074748-87074767 | MS.gene32713:CDS | 35.0% | |
| GTACTAAGCCTAACTTCTTA+CGG | + | chr3.3:87074674-87074693 | MS.gene32713:CDS | 35.0% | |
| GTTGAGATTGAAACTGAAAC+TGG | - | chr3.3:87073036-87073055 | None:intergenic | 35.0% | |
| TAGTGAAACTGTTTCCTGAA+TGG | + | chr3.3:87074848-87074867 | MS.gene32713:CDS | 35.0% | |
| TCAGGAAACAGTTTCACTAT+TGG | - | chr3.3:87074847-87074866 | None:intergenic | 35.0% | |
| TGAAACTGAAACTGGAAGAT+GGG | - | chr3.3:87073028-87073047 | None:intergenic | 35.0% | |
| TTCAGGTATAGTTCCTTTGT+CGG | - | chr3.3:87074961-87074980 | None:intergenic | 35.0% | |
| TTGAAACTGAAACTGGAAGA+TGG | - | chr3.3:87073029-87073048 | None:intergenic | 35.0% | |
| ! | CAAGGTTTTTGAACAAGACA+TGG | + | chr3.3:87074891-87074910 | MS.gene32713:CDS | 35.0% |
| ! | CCAAGTTTGAAAAGCTTTGA+CGG | - | chr3.3:87075241-87075260 | None:intergenic | 35.0% |
| ! | GGTATTTTACTGACATTTGG+AGG | - | chr3.3:87074424-87074443 | None:intergenic | 35.0% |
| !! | AAGCAAAATGAGTTTTGGTG+GGG | - | chr3.3:87072959-87072978 | None:intergenic | 35.0% |
| !! | AGTCCAAAGGAGTATTTGTT+TGG | - | chr3.3:87073003-87073022 | None:intergenic | 35.0% |
| !! | CAAAGCAAAATGAGTTTTGG+TGG | - | chr3.3:87072961-87072980 | None:intergenic | 35.0% |
| !! | CAAAGGAGTATTTGTTTGGA+TGG | - | chr3.3:87072999-87073018 | None:intergenic | 35.0% |
| !! | GGATTCTCAAGGTGTTATTT+GGG | + | chr3.3:87074378-87074397 | MS.gene32713:CDS | 35.0% |
| AAACCTTGCTTGCATTCTGA+TGG | - | chr3.3:87074879-87074898 | None:intergenic | 40.0% | |
| ATACACTCCAACAGAGCATA+GGG | - | chr3.3:87075358-87075377 | None:intergenic | 40.0% | |
| CATGAAAACTACTAGCACAG+GGG | - | chr3.3:87073940-87073959 | None:intergenic | 40.0% | |
| CCATGAAAACTACTAGCACA+GGG | - | chr3.3:87073941-87073960 | None:intergenic | 40.0% | |
| CCATTCCTCTTTCCAATCAT+AGG | - | chr3.3:87073216-87073235 | None:intergenic | 40.0% | |
| CCTATGATTGGAAAGAGGAA+TGG | + | chr3.3:87073213-87073232 | MS.gene32713:CDS | 40.0% | |
| CTGCATCAACTGTACTTGAT+GGG | + | chr3.3:87073120-87073139 | MS.gene32713:CDS | 40.0% | |
| CTTGCAAAGTTCTCAAACCA+AGG | - | chr3.3:87074445-87074464 | None:intergenic | 40.0% | |
| GTGCTGTGACCAAAATGATA+TGG | - | chr3.3:87075051-87075070 | None:intergenic | 40.0% | |
| GTTGAAACATCTTGAAACCC+TGG | - | chr3.3:87074469-87074488 | None:intergenic | 40.0% | |
| TACTTGATGGGGAAGAAGAT+CGG | + | chr3.3:87073132-87073151 | MS.gene32713:CDS | 40.0% | |
| TATCATGGATGGCAATTCGA+AGG | + | chr3.3:87074170-87074189 | MS.gene32713:CDS | 40.0% | |
| TATGAAGTGAGGGATTCTCA+AGG | + | chr3.3:87074367-87074386 | MS.gene32713:CDS | 40.0% | |
| TCAATTACAGCAGGCTCTTT+AGG | - | chr3.3:87075084-87075103 | None:intergenic | 40.0% | |
| TCTCGCATGATAGAACAGAT+TGG | + | chr3.3:87074557-87074576 | MS.gene32713:CDS | 40.0% | |
| TCTGTCACCTCAAAAAGTAG+CGG | - | chr3.3:87074607-87074626 | None:intergenic | 40.0% | |
| TCTGTTCTATCATGCGAGAT+TGG | - | chr3.3:87074556-87074575 | None:intergenic | 40.0% | |
| TGACAGAACGAACTGATAGA+GGG | + | chr3.3:87074620-87074639 | MS.gene32713:CDS | 40.0% | |
| TGCATCAACTGTACTTGATG+GGG | + | chr3.3:87073121-87073140 | MS.gene32713:CDS | 40.0% | |
| TGTGTTAAGATACCTCAGGT+AGG | + | chr3.3:87074203-87074222 | MS.gene32713:intron | 40.0% | |
| TTCTTGTATCTGGGAGACAA+TGG | + | chr3.3:87075307-87075326 | MS.gene32713:CDS | 40.0% | |
| TTGAATGCCTGTATCATGGA+TGG | + | chr3.3:87074159-87074178 | MS.gene32713:CDS | 40.0% | |
| ! | AGAAGATCGGAAAGTTCTAG+TGG | + | chr3.3:87073145-87073164 | MS.gene32713:CDS | 40.0% |
| ! | AGTATTTGTTTGGATGGTGG+AGG | - | chr3.3:87072993-87073012 | None:intergenic | 40.0% |
| ! | AGTTTGAAAAGCTTTGACGG+CGG | - | chr3.3:87075238-87075257 | None:intergenic | 40.0% |
| ! | CCGTCAAAGCTTTTCAAACT+TGG | + | chr3.3:87075238-87075257 | MS.gene32713:CDS | 40.0% |
| ! | CCTGTGCTAGTAGTTTTCAT+GGG | + | chr3.3:87073939-87073958 | MS.gene32713:intron | 40.0% |
| ! | CTTGGTTTGAGAACTTTGCA+AGG | + | chr3.3:87074443-87074462 | MS.gene32713:CDS | 40.0% |
| ! | GAAGATCGGAAAGTTCTAGT+GGG | + | chr3.3:87073146-87073165 | MS.gene32713:CDS | 40.0% |
| ! | GCATTGGCAATTCTTGTATC+TGG | + | chr3.3:87075297-87075316 | MS.gene32713:CDS | 40.0% |
| !! | AGGAGTATTTGTTTGGATGG+TGG | - | chr3.3:87072996-87073015 | None:intergenic | 40.0% |
| !! | CTCAAGGTGTTATTTGGGTA+TGG | + | chr3.3:87074383-87074402 | MS.gene32713:CDS | 40.0% |
| !! | GGGATTCTCAAGGTGTTATT+TGG | + | chr3.3:87074377-87074396 | MS.gene32713:CDS | 40.0% |
| !! | TACTTGGTGCTCCTAATGTT+CGG | + | chr3.3:87073573-87073592 | MS.gene32713:intron | 40.0% |
| !! | TTCTGATGGAAGTACCATTC+AGG | - | chr3.3:87074865-87074884 | None:intergenic | 40.0% |
| AAGGCCAGTTGATTGATGGA+AGG | + | chr3.3:87074135-87074154 | MS.gene32713:CDS | 45.0% | |
| ACAATACTGCTACTGCTGAC+AGG | + | chr3.3:87073765-87073784 | MS.gene32713:intron | 45.0% | |
| ACAATGGAAAGTCCTCCTGT+TGG | + | chr3.3:87075323-87075342 | MS.gene32713:CDS | 45.0% | |
| AGGAAGTGGATGGACAAAGT+GGG | + | chr3.3:87075015-87075034 | MS.gene32713:CDS | 45.0% | |
| AGGCTTGAATGCCTGTATCA+TGG | + | chr3.3:87074155-87074174 | MS.gene32713:CDS | 45.0% | |
| ATGGATTTCCCTTGTCCAGT+TGG | - | chr3.3:87074790-87074809 | None:intergenic | 45.0% | |
| CAAGCCTTCCATCAATCAAC+TGG | - | chr3.3:87074142-87074161 | None:intergenic | 45.0% | |
| CAGCTGATGCAAAAATTCCC+AGG | + | chr3.3:87074326-87074345 | MS.gene32713:CDS | 45.0% | |
| CATACACTCCAACAGAGCAT+AGG | - | chr3.3:87075359-87075378 | None:intergenic | 45.0% | |
| CCCATGAAAACTACTAGCAC+AGG | - | chr3.3:87073942-87073961 | None:intergenic | 45.0% | |
| CGAATTGCCATCCATGATAC+AGG | - | chr3.3:87074169-87074188 | None:intergenic | 45.0% | |
| CGTGTGGTACATTCTTAGTG+AGG | - | chr3.3:87073250-87073269 | None:intergenic | 45.0% | |
| CTTCCATCAGAATGCAAGCA+AGG | + | chr3.3:87074873-87074892 | MS.gene32713:CDS | 45.0% | |
| GAAAGAGAAGGTTCCGACAA+AGG | + | chr3.3:87074945-87074964 | MS.gene32713:CDS | 45.0% | |
| GAGAACTTGCAGCCTATGAT+TGG | + | chr3.3:87073201-87073220 | MS.gene32713:CDS | 45.0% | |
| GCCTAACTTCTTACGGTTTG+AGG | + | chr3.3:87074681-87074700 | MS.gene32713:CDS | 45.0% | |
| GCCTCAAACCGTAAGAAGTT+AGG | - | chr3.3:87074685-87074704 | None:intergenic | 45.0% | |
| GCTGCATCAACTGTACTTGA+TGG | + | chr3.3:87073119-87073138 | MS.gene32713:CDS | 45.0% | |
| GGTGCATGTTCAATTACAGC+AGG | - | chr3.3:87075093-87075112 | None:intergenic | 45.0% | |
| GTAATTGAACATGCACCTGC+TGG | + | chr3.3:87075096-87075115 | MS.gene32713:CDS | 45.0% | |
| GTGAACTTAGTGACTGTCCT+AGG | - | chr3.3:87073870-87073889 | None:intergenic | 45.0% | |
| GTGACAGAACGAACTGATAG+AGG | + | chr3.3:87074619-87074638 | MS.gene32713:CDS | 45.0% | |
| TAAAGTCAGTAGCCTACCTG+AGG | - | chr3.3:87074218-87074237 | None:intergenic | 45.0% | |
| TCAAACACTGTGAGACCAAG+TGG | - | chr3.3:87073278-87073297 | None:intergenic | 45.0% | |
| TCAGTGGTCTGTTCCTTTGT+AGG | + | chr3.3:87074764-87074783 | MS.gene32713:CDS | 45.0% | |
| TCCAAACCTCACTATCAGCA+TGG | - | chr3.3:87074809-87074828 | None:intergenic | 45.0% | |
| TCTGAAGGCCAGTTGATTGA+TGG | + | chr3.3:87074131-87074150 | MS.gene32713:CDS | 45.0% | |
| TGCAGCCTATGATTGGAAAG+AGG | + | chr3.3:87073208-87073227 | MS.gene32713:CDS | 45.0% | |
| TGCGAGATTGGAATATGAGC+AGG | - | chr3.3:87074544-87074563 | None:intergenic | 45.0% | |
| TGCTGAATACAGGAAGTGGA+TGG | + | chr3.3:87075005-87075024 | MS.gene32713:CDS | 45.0% | |
| TTCCTTTCACAATGCTGGAC+TGG | + | chr3.3:87074072-87074091 | MS.gene32713:intron | 45.0% | |
| TTGAGAACTTTGCAAGGCCA+GGG | + | chr3.3:87074449-87074468 | MS.gene32713:CDS | 45.0% | |
| TTTGAGAACTTTGCAAGGCC+AGG | + | chr3.3:87074448-87074467 | MS.gene32713:CDS | 45.0% | |
| TTTGTAGGCCAACTGGACAA+GGG | + | chr3.3:87074779-87074798 | MS.gene32713:CDS | 45.0% | |
| ! | ACACATGGGTTGCTGAATAC+AGG | + | chr3.3:87074995-87075014 | MS.gene32713:CDS | 45.0% |
| ! | ATGCTGATAGTGAGGTTTGG+AGG | + | chr3.3:87074808-87074827 | MS.gene32713:CDS | 45.0% |
| ! | CAAGCAGAAGAAAGCATGCA+GGG | + | chr3.3:87073069-87073088 | MS.gene32713:CDS | 45.0% |
| ! | CACGGGATGCCATATCATTT+TGG | + | chr3.3:87075039-87075058 | MS.gene32713:CDS | 45.0% |
| ! | CCCTGTGCTAGTAGTTTTCA+TGG | + | chr3.3:87073938-87073957 | MS.gene32713:intron | 45.0% |
| ! | CTGGGAATTTTTGCATCAGC+TGG | - | chr3.3:87074328-87074347 | None:intergenic | 45.0% |
| ! | GGAAATCCATGCTGATAGTG+AGG | + | chr3.3:87074800-87074819 | MS.gene32713:CDS | 45.0% |
| ! | TCAAGCAGAAGAAAGCATGC+AGG | + | chr3.3:87073068-87073087 | MS.gene32713:CDS | 45.0% |
| ! | TCCATGCTGATAGTGAGGTT+TGG | + | chr3.3:87074805-87074824 | MS.gene32713:CDS | 45.0% |
| !! | ACTTGGTGCTCCTAATGTTC+GGG | + | chr3.3:87073574-87073593 | MS.gene32713:intron | 45.0% |
| !! | GTTTTAACACAGGCTGACCT+GGG | - | chr3.3:87074346-87074365 | None:intergenic | 45.0% |
| !! | GTTTTGGTGGGGAGAAGAAA+TGG | - | chr3.3:87072948-87072967 | None:intergenic | 45.0% |
| !! | TGGAAGATGGGTTAGTCCAA+AGG | - | chr3.3:87073016-87073035 | None:intergenic | 45.0% |
| !!! | TGCACAACCGCTACTTTTTG+AGG | + | chr3.3:87074597-87074616 | MS.gene32713:CDS | 45.0% |
| !!! | TGTTTTAACACAGGCTGACC+TGG | - | chr3.3:87074347-87074366 | None:intergenic | 45.0% |
| ATACTGCTACTGCTGACAGG+AGG | + | chr3.3:87073768-87073787 | MS.gene32713:intron | 50.0% | |
| ATAGGGATGCAGATGCCAAC+AGG | - | chr3.3:87075341-87075360 | None:intergenic | 50.0% | |
| ATCAGCTTCCTCACCTGCAA+AGG | + | chr3.3:87075134-87075153 | MS.gene32713:CDS | 50.0% | |
| CAGGAAGTGGATGGACAAAG+TGG | + | chr3.3:87075014-87075033 | MS.gene32713:CDS | 50.0% | |
| CGAACTGATAGAGGGTTTGC+AGG | + | chr3.3:87074628-87074647 | MS.gene32713:CDS | 50.0% | |
| CTGATAGAGGGTTTGCAGGT+TGG | + | chr3.3:87074632-87074651 | MS.gene32713:CDS | 50.0% | |
| CTGTTCCTTTGTAGGCCAAC+TGG | + | chr3.3:87074772-87074791 | MS.gene32713:CDS | 50.0% | |
| CTTTGTAGGCCAACTGGACA+AGG | + | chr3.3:87074778-87074797 | MS.gene32713:CDS | 50.0% | |
| GAAAAATGCCCTTTCGGCTG+TGG | + | chr3.3:87075260-87075279 | MS.gene32713:CDS | 50.0% | |
| GATGGCAATTCGAAGGCGAA+GGG | + | chr3.3:87074177-87074196 | MS.gene32713:CDS | 50.0% | |
| GGGTTGCTGAATACAGGAAG+TGG | + | chr3.3:87075001-87075020 | MS.gene32713:CDS | 50.0% | |
| GTCCAGTCCAGCATTGTGAA+AGG | - | chr3.3:87074077-87074096 | None:intergenic | 50.0% | |
| TACAGCAGGCTCTTTAGGCA+AGG | - | chr3.3:87075079-87075098 | None:intergenic | 50.0% | |
| TCAGCTTCCTCACCTGCAAA+GGG | + | chr3.3:87075135-87075154 | MS.gene32713:CDS | 50.0% | |
| TCTGCATCCCTATGCTCTGT+TGG | + | chr3.3:87075348-87075367 | MS.gene32713:CDS | 50.0% | |
| TGGATGGACAAAGTGGGACA+CGG | + | chr3.3:87075021-87075040 | MS.gene32713:CDS | 50.0% | |
| TTCCAGTGAGCAAGAACGCA+GGG | + | chr3.3:87073172-87073191 | MS.gene32713:CDS | 50.0% | |
| ! | ATAGAGGGTTTGCAGGTTGG+TGG | + | chr3.3:87074635-87074654 | MS.gene32713:CDS | 50.0% |
| ! | ATGAAGATCGGTGTCCTCAC+AGG | + | chr3.3:87073345-87073364 | MS.gene32713:CDS | 50.0% |
| ! | CTTGTCCAGTTGGCCTACAA+AGG | - | chr3.3:87074780-87074799 | None:intergenic | 50.0% |
| !! | TAGAGGGTTTGCAGGTTGGT+GGG | + | chr3.3:87074636-87074655 | MS.gene32713:CDS | 50.0% |
| AGACCAAGTGGTGCATCGTG+TGG | - | chr3.3:87073266-87073285 | None:intergenic | 55.0% | |
| AGCTTCCTCACCTGCAAAGG+GGG | + | chr3.3:87075137-87075156 | MS.gene32713:CDS | 55.0% | |
| AGTCCTGCAACAAGTCCAGC+AGG | - | chr3.3:87075114-87075133 | None:intergenic | 55.0% | |
| CAGCTTCCTCACCTGCAAAG+GGG | + | chr3.3:87075136-87075155 | MS.gene32713:CDS | 55.0% | |
| CTACTGCTGACAGGAGGCTA+GGG | + | chr3.3:87073774-87073793 | MS.gene32713:intron | 55.0% | |
| CTGCGTTCTTGCTCACTGGA+AGG | - | chr3.3:87073173-87073192 | None:intergenic | 55.0% | |
| CTTCCAGTGAGCAAGAACGC+AGG | + | chr3.3:87073171-87073190 | MS.gene32713:CDS | 55.0% | |
| GGATGGACAAAGTGGGACAC+GGG | + | chr3.3:87075022-87075041 | MS.gene32713:CDS | 55.0% | |
| GGATGGCAATTCGAAGGCGA+AGG | + | chr3.3:87074176-87074195 | MS.gene32713:CDS | 55.0% | |
| GGCTGTTGCGTTAGCTGCAT+TGG | + | chr3.3:87075281-87075300 | MS.gene32713:CDS | 55.0% | |
| GTACCACACGATGCACCACT+TGG | + | chr3.3:87073260-87073279 | MS.gene32713:CDS | 55.0% | |
| TCCAGTGAGCAAGAACGCAG+GGG | + | chr3.3:87073173-87073192 | MS.gene32713:CDS | 55.0% | |
| TGGTGGGGACGAGAGAAAGA+CGG | + | chr3.3:87074652-87074671 | MS.gene32713:CDS | 55.0% | |
| ! | AGATCGGTGTCCTCACAGGT+TGG | + | chr3.3:87073349-87073368 | MS.gene32713:intron | 55.0% |
| ! | AGCTTTGACATCTGCCGTGG+CGG | - | chr3.3:87073102-87073121 | None:intergenic | 55.0% |
| ! | TGCAGCTTTGACATCTGCCG+TGG | - | chr3.3:87073105-87073124 | None:intergenic | 55.0% |
| !! | AGAGGGTTTGCAGGTTGGTG+GGG | + | chr3.3:87074637-87074656 | MS.gene32713:CDS | 55.0% |
| AATGCCCCCCTTTGCAGGTG+AGG | - | chr3.3:87075145-87075164 | None:intergenic | 60.0% | |
| ACCCCTGCGTTCTTGCTCAC+TGG | - | chr3.3:87073177-87073196 | None:intergenic | 60.0% | |
| ACGCAACAGCCACAGCCGAA+AGG | - | chr3.3:87075272-87075291 | None:intergenic | 60.0% | |
| CGCAACAGCCACAGCCGAAA+GGG | - | chr3.3:87075271-87075290 | None:intergenic | 60.0% | |
| GCTACTGCTGACAGGAGGCT+AGG | + | chr3.3:87073773-87073792 | MS.gene32713:intron | 60.0% | |
| GCTTCCTCACCTGCAAAGGG+GGG | + | chr3.3:87075138-87075157 | MS.gene32713:CDS | 60.0% | |
| GGGATGCAGATGCCAACAGG+AGG | - | chr3.3:87075338-87075357 | None:intergenic | 60.0% | |
| TGCAGGGTATGTCACCGCCA+CGG | + | chr3.3:87073085-87073104 | MS.gene32713:CDS | 60.0% | |
| ! | TCACCTGCAAAGGGGGGCAT+TGG | + | chr3.3:87075144-87075163 | MS.gene32713:CDS | 60.0% |
| !! | CACCTGCAAAGGGGGGCATT+GGG | + | chr3.3:87075145-87075164 | MS.gene32713:CDS | 60.0% |
| !! | GCACCTGCTGGACTTGTTGC+AGG | + | chr3.3:87075108-87075127 | MS.gene32713:CDS | 60.0% |
| GTCCCAATGCCCCCCTTTGC+AGG | - | chr3.3:87075150-87075169 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 87072930 | 87075440 | 87072930 | ID=MS.gene32713 |
| chr3.3 | mRNA | 87072930 | 87075440 | 87072930 | ID=MS.gene32713.t1;Parent=MS.gene32713 |
| chr3.3 | exon | 87072930 | 87073366 | 87072930 | ID=MS.gene32713.t1.exon1;Parent=MS.gene32713.t1 |
| chr3.3 | CDS | 87072930 | 87073366 | 87072930 | ID=cds.MS.gene32713.t1;Parent=MS.gene32713.t1 |
| chr3.3 | exon | 87074118 | 87074220 | 87074118 | ID=MS.gene32713.t1.exon2;Parent=MS.gene32713.t1 |
| chr3.3 | CDS | 87074118 | 87074220 | 87074118 | ID=cds.MS.gene32713.t1;Parent=MS.gene32713.t1 |
| chr3.3 | exon | 87074322 | 87075440 | 87074322 | ID=MS.gene32713.t1.exon3;Parent=MS.gene32713.t1 |
| chr3.3 | CDS | 87074322 | 87075440 | 87074322 | ID=cds.MS.gene32713.t1;Parent=MS.gene32713.t1 |
| Gene Sequence |
| Protein sequence |
