Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067059.t1 | RHN69307.1 | 78.9 | 1168 | 217 | 9 | 1 | 1156 | 1 | 1150 | 0.00E+00 | 1446 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067059.t1 | G7J2K7 | 78.0 | 1168 | 227 | 9 | 1 | 1156 | 1 | 1150 | 0.0e+00 | 1446.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene067059 | 0.850898 | 1.26E-60 | -1.69E-46 |
| MS.gene049159 | MS.gene067059 | 0.837231 | 5.87E-57 | -1.69E-46 |
| MS.gene049254 | MS.gene067059 | 0.83297 | 6.98E-56 | -1.69E-46 |
| MS.gene049343 | MS.gene067059 | 0.864126 | 1.52E-64 | -1.69E-46 |
| MS.gene049501 | MS.gene067059 | 0.807178 | 5.74E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene067059 | 0.847272 | 1.28E-59 | -1.69E-46 |
| MS.gene049711 | MS.gene067059 | 0.80926 | 2.07E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene067059 | 0.82414 | 9.49E-54 | -1.69E-46 |
| MS.gene049825 | MS.gene067059 | 0.823722 | 1.19E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene067059 | 0.825535 | 4.45E-54 | -1.69E-46 |
| MS.gene049873 | MS.gene067059 | 0.817693 | 2.89E-52 | -1.69E-46 |
| MS.gene050026 | MS.gene067059 | 0.804811 | 1.81E-49 | -1.69E-46 |
| MS.gene05045 | MS.gene067059 | 0.814224 | 1.72E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene067059 | 0.822452 | 2.35E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene067059 | 0.85126 | 9.97E-61 | -1.69E-46 |
| MS.gene051279 | MS.gene067059 | 0.810102 | 1.36E-50 | -1.69E-46 |
| MS.gene051332 | MS.gene067059 | 0.810571 | 1.08E-50 | -1.69E-46 |
| MS.gene051363 | MS.gene067059 | 0.804216 | 2.40E-49 | -1.69E-46 |
| MS.gene051574 | MS.gene067059 | 0.848294 | 6.72E-60 | -1.69E-46 |
| MS.gene051700 | MS.gene067059 | 0.838698 | 2.46E-57 | -1.69E-46 |
| MS.gene051719 | MS.gene067059 | 0.813304 | 2.74E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene067059 | 0.81959 | 1.07E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene067059 | 0.877295 | 7.05E-69 | -1.69E-46 |
| MS.gene05188 | MS.gene067059 | 0.822803 | 1.95E-53 | -1.69E-46 |
| MS.gene051975 | MS.gene067059 | 0.826854 | 2.16E-54 | -1.69E-46 |
| MS.gene052037 | MS.gene067059 | 0.800892 | 1.16E-48 | -1.69E-46 |
| MS.gene052519 | MS.gene067059 | 0.842806 | 2.07E-58 | -1.69E-46 |
| MS.gene052582 | MS.gene067059 | 0.840885 | 6.64E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene067059 | 0.859503 | 3.95E-63 | -1.69E-46 |
| MS.gene052611 | MS.gene067059 | 0.807081 | 6.02E-50 | -1.69E-46 |
| MS.gene052717 | MS.gene067059 | 0.821098 | 4.84E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene067059 | 0.826905 | 2.10E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene067059 | 0.817165 | 3.80E-52 | -1.69E-46 |
| MS.gene05308 | MS.gene067059 | 0.842556 | 2.41E-58 | -1.69E-46 |
| MS.gene053122 | MS.gene067059 | 0.842584 | 2.36E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene067059 | 0.906698 | 1.12E-80 | -1.69E-46 |
| MS.gene053592 | MS.gene067059 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene05364 | MS.gene067059 | 0.809405 | 1.92E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene067059 | 0.805524 | 1.28E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene067059 | 0.817432 | 3.31E-52 | -1.69E-46 |
| MS.gene05458 | MS.gene067059 | 0.823464 | 1.37E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene067059 | 0.852538 | 4.32E-61 | -1.69E-46 |
| MS.gene054775 | MS.gene067059 | 0.862534 | 4.73E-64 | -1.69E-46 |
| MS.gene055166 | MS.gene067059 | 0.802788 | 4.75E-49 | -1.69E-46 |
| MS.gene055228 | MS.gene067059 | 0.802785 | 4.76E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene067059 | 0.81259 | 3.93E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene067059 | 0.811161 | 8.04E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene067059 | 0.839489 | 1.54E-57 | -1.69E-46 |
| MS.gene055586 | MS.gene067059 | 0.818903 | 1.54E-52 | -1.69E-46 |
| MS.gene055589 | MS.gene067059 | 0.820451 | 6.81E-53 | -1.69E-46 |
| MS.gene055694 | MS.gene067059 | 0.801141 | 1.04E-48 | -1.69E-46 |
| MS.gene055778 | MS.gene067059 | 0.820604 | 6.28E-53 | -1.69E-46 |
| MS.gene055808 | MS.gene067059 | 0.805231 | 1.48E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene067059 | 0.813736 | 2.20E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene067059 | 0.868965 | 4.41E-66 | -1.69E-46 |
| MS.gene056174 | MS.gene067059 | 0.809156 | 2.18E-50 | -1.69E-46 |
| MS.gene056215 | MS.gene067059 | 0.81248 | 4.15E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene067059 | 0.827276 | 1.71E-54 | -1.69E-46 |
| MS.gene056366 | MS.gene067059 | 0.829751 | 4.32E-55 | -1.69E-46 |
| MS.gene056403 | MS.gene067059 | 0.831603 | 1.52E-55 | -1.69E-46 |
| MS.gene056553 | MS.gene067059 | 0.800547 | 1.37E-48 | -1.69E-46 |
| MS.gene05659 | MS.gene067059 | 0.817234 | 3.66E-52 | -1.69E-46 |
| MS.gene056605 | MS.gene067059 | 0.807903 | 4.03E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene067059 | 0.820321 | 7.30E-53 | -1.69E-46 |
| MS.gene05689 | MS.gene067059 | 0.833123 | 6.39E-56 | -1.69E-46 |
| MS.gene05690 | MS.gene067059 | 0.802494 | 5.46E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene067059 | 0.801478 | 8.84E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene067059 | 0.803719 | 3.05E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene067059 | 0.822917 | 1.83E-53 | -1.69E-46 |
| MS.gene057314 | MS.gene067059 | 0.836307 | 1.01E-56 | -1.69E-46 |
| MS.gene057444 | MS.gene067059 | 0.806111 | 9.64E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene067059 | 0.862752 | 4.06E-64 | -1.69E-46 |
| MS.gene058037 | MS.gene067059 | 0.823443 | 1.38E-53 | -1.69E-46 |
| MS.gene058548 | MS.gene067059 | 0.800236 | 1.58E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene067059 | 0.843776 | 1.14E-58 | -1.69E-46 |
| MS.gene058636 | MS.gene067059 | 0.809419 | 1.91E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene067059 | 0.806275 | 8.90E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene067059 | 0.802411 | 5.68E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene067059 | 0.830311 | 3.15E-55 | -1.69E-46 |
| MS.gene058979 | MS.gene067059 | 0.831521 | 1.59E-55 | -1.69E-46 |
| MS.gene05954 | MS.gene067059 | 0.814727 | 1.33E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene067059 | 0.85292 | 3.36E-61 | -1.69E-46 |
| MS.gene059725 | MS.gene067059 | 0.81506 | 1.12E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene067059 | 0.84915 | 3.89E-60 | -1.69E-46 |
| MS.gene05985 | MS.gene067059 | -0.810144 | 1.33E-50 | -1.69E-46 |
| MS.gene059935 | MS.gene067059 | 0.850961 | 1.21E-60 | -1.69E-46 |
| MS.gene060310 | MS.gene067059 | 0.802088 | 6.62E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene067059 | 0.830822 | 2.37E-55 | -1.69E-46 |
| MS.gene060429 | MS.gene067059 | 0.857747 | 1.32E-62 | -1.69E-46 |
| MS.gene060777 | MS.gene067059 | 0.802091 | 6.61E-49 | -1.69E-46 |
| MS.gene060830 | MS.gene067059 | 0.822918 | 1.83E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene067059 | 0.82635 | 2.85E-54 | -1.69E-46 |
| MS.gene060937 | MS.gene067059 | 0.81898 | 1.48E-52 | -1.69E-46 |
| MS.gene061188 | MS.gene067059 | 0.810314 | 1.23E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067059.t1 | MTR_3g086220 | 88.281 | 1169 | 105 | 10 | 1 | 1156 | 1 | 1150 | 0.0 | 1774 |
| MS.gene067059.t1 | MTR_3g086220 | 88.271 | 1168 | 105 | 10 | 1 | 1155 | 1 | 1149 | 0.0 | 1771 |
| MS.gene067059.t1 | MTR_3g086220 | 88.422 | 1166 | 103 | 10 | 1 | 1153 | 1 | 1147 | 0.0 | 1771 |
| MS.gene067059.t1 | MTR_2g036070 | 42.529 | 87 | 50 | 0 | 10 | 96 | 8 | 94 | 3.15e-18 | 88.6 |
| MS.gene067059.t1 | MTR_2g036080 | 36.449 | 107 | 53 | 1 | 4 | 95 | 1193 | 1299 | 3.75e-14 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067059.t1 | AT5G37190 | 35.570 | 149 | 92 | 2 | 12 | 159 | 15 | 160 | 2.75e-20 | 97.8 |
| MS.gene067059.t1 | AT5G37190 | 35.570 | 149 | 92 | 2 | 12 | 159 | 15 | 160 | 2.91e-20 | 97.8 |
| MS.gene067059.t1 | AT5G37190 | 35.570 | 149 | 92 | 2 | 12 | 159 | 15 | 160 | 4.16e-20 | 97.4 |
| MS.gene067059.t1 | AT4G00930 | 47.500 | 80 | 42 | 0 | 12 | 91 | 15 | 94 | 1.11e-18 | 92.8 |
| MS.gene067059.t1 | AT4G00930 | 47.500 | 80 | 42 | 0 | 12 | 91 | 15 | 94 | 1.14e-18 | 92.8 |
| MS.gene067059.t1 | AT4G00930 | 47.500 | 80 | 42 | 0 | 12 | 91 | 15 | 94 | 1.14e-18 | 92.8 |
| MS.gene067059.t1 | AT4G00930 | 47.500 | 80 | 42 | 0 | 12 | 91 | 15 | 94 | 1.25e-18 | 92.8 |
| MS.gene067059.t1 | AT4G00930 | 47.500 | 80 | 42 | 0 | 12 | 91 | 15 | 94 | 1.26e-18 | 92.8 |
| MS.gene067059.t1 | AT4G00580 | 44.444 | 90 | 48 | 2 | 5 | 92 | 1 | 90 | 2.19e-18 | 88.2 |
| MS.gene067059.t1 | AT1G30060 | 43.678 | 87 | 48 | 1 | 12 | 97 | 10 | 96 | 4.36e-18 | 83.6 |
| MS.gene067059.t1 | AT2G01800 | 44.828 | 87 | 47 | 1 | 12 | 97 | 10 | 96 | 4.80e-18 | 85.5 |
| MS.gene067059.t1 | AT2G01800 | 44.828 | 87 | 47 | 1 | 12 | 97 | 10 | 96 | 7.02e-18 | 85.9 |
| MS.gene067059.t1 | AT2G01800 | 44.828 | 87 | 47 | 1 | 12 | 97 | 10 | 96 | 7.87e-18 | 86.3 |
| MS.gene067059.t1 | AT4G00920 | 46.512 | 86 | 44 | 1 | 12 | 97 | 15 | 98 | 3.26e-17 | 84.7 |
| MS.gene067059.t1 | AT4G00580 | 42.169 | 83 | 47 | 1 | 11 | 92 | 1 | 83 | 7.67e-16 | 80.5 |
| MS.gene067059.t1 | AT2G02770 | 45.745 | 94 | 48 | 3 | 5 | 97 | 1 | 92 | 1.16e-15 | 79.3 |
| MS.gene067059.t1 | AT1G55865 | 34.091 | 88 | 58 | 0 | 12 | 99 | 9 | 96 | 2.01e-13 | 72.4 |
Find 222 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTGTATTTGTCCGATTT+TGG | 0.076793 | 3.4:-80380697 | None:intergenic |
| GTCATCCTTAGTGCCTTTAT+TGG | 0.184884 | 3.4:-80382081 | None:intergenic |
| TCACATTGAGTATGTGAATT+TGG | 0.200820 | 3.4:-80382392 | None:intergenic |
| TCACATTCAATATGTGAATT+TGG | 0.206092 | 3.4:-80382047 | None:intergenic |
| AAAAGAAGCTATAAAGAATT+TGG | 0.234461 | 3.4:+80382016 | MS.gene067059:CDS |
| TCAAGCTTTGCAGTTGAAAT+AGG | 0.236952 | 3.4:-80383903 | None:intergenic |
| AAATATCGCAACAATGCTTC+TGG | 0.279385 | 3.4:+80383843 | MS.gene067059:CDS |
| TGGATCTGATAAATGCATTA+AGG | 0.286782 | 3.4:+80382421 | MS.gene067059:CDS |
| TTCTTAGGCTTCTTCTTTAG+AGG | 0.290983 | 3.4:-80382740 | None:intergenic |
| AATAATGCTTTAGTTGGTTC+TGG | 0.300663 | 3.4:+80381003 | MS.gene067059:CDS |
| TGCAGATAAAGAAGTAATTA+AGG | 0.308455 | 3.4:+80382619 | MS.gene067059:CDS |
| GCTTGAAGGTTCCAACAAAA+TGG | 0.312808 | 3.4:+80383920 | MS.gene067059:CDS |
| TATTCTTCAACAATTGCAAC+TGG | 0.332657 | 3.4:-80381062 | None:intergenic |
| GGTTCTGGTGGCGATAATAA+TGG | 0.333510 | 3.4:+80381018 | MS.gene067059:CDS |
| TGGACCTGGTGGAGGAAATA+AGG | 0.335426 | 3.4:+80381500 | MS.gene067059:CDS |
| CATATTGAATGTGAAGTAGA+TGG | 0.341253 | 3.4:+80381717 | MS.gene067059:CDS |
| GAACACATGGGCAATCAAAA+AGG | 0.341781 | 3.4:-80382328 | None:intergenic |
| AATATTGAATGTGAAGTAGA+TGG | 0.344604 | 3.4:+80381480 | MS.gene067059:CDS |
| CAATGCTTCTGGGAAAAGTA+TGG | 0.345200 | 3.4:+80383854 | MS.gene067059:CDS |
| AATACAGATTCATGGCATTA+AGG | 0.348777 | 3.4:+80380710 | MS.gene067059:CDS |
| CGGACAATATTCCGCTTAAC+TGG | 0.348908 | 3.4:-80382578 | None:intergenic |
| CAAAACGAATCTTGACAAAA+TGG | 0.349538 | 3.4:+80383023 | MS.gene067059:CDS |
| TTCTGGGAAAAGTATGGATT+TGG | 0.352289 | 3.4:+80383860 | MS.gene067059:CDS |
| CTTTCATGCTTTCCCAAAAT+CGG | 0.353022 | 3.4:+80380684 | MS.gene067059:CDS |
| CTTCGTCAGGTGGAATCTAT+TGG | 0.359366 | 3.4:+80380973 | MS.gene067059:CDS |
| GGAAGGGATGGTAATGTTGC+AGG | 0.360140 | 3.4:+80383488 | MS.gene067059:CDS |
| ATCATCCTTATTTCTTTCAC+TGG | 0.361468 | 3.4:-80381742 | None:intergenic |
| CACCTGAAAATTGTTGAAAC+TGG | 0.364926 | 3.4:-80382267 | None:intergenic |
| TGGATCCAGTGAAAGAAATA+AGG | 0.367960 | 3.4:+80381737 | MS.gene067059:CDS |
| TACCTGAAAATCATTGAAAC+TGG | 0.372298 | 3.4:-80381922 | None:intergenic |
| TTCTGTTAGGTTAAACGTAA+TGG | 0.377573 | 3.4:+80380814 | MS.gene067059:intron |
| TCCTGTTTGTTCCTTGATTG+AGG | 0.378018 | 3.4:-80381945 | None:intergenic |
| TAAAGGAGGTGTCGCGAATA+TGG | 0.379116 | 3.4:+80381143 | MS.gene067059:CDS |
| CGCGGACAATGCTGATTCCT+TGG | 0.381471 | 3.4:+80383563 | MS.gene067059:CDS |
| GTAGAAGATTGTTTGTTGTT+TGG | 0.383134 | 3.4:-80383654 | None:intergenic |
| ATTTCAACTGCAAAGCTTGA+AGG | 0.383535 | 3.4:+80383906 | MS.gene067059:CDS |
| GTTCTTTCTGTGACTGATAA+GGG | 0.384798 | 3.4:+80383528 | MS.gene067059:CDS |
| CGTTGATAAATTCTATCAAT+TGG | 0.386782 | 3.4:+80384941 | MS.gene067059:CDS |
| GCAGAAGAAAAGCTTGTTAG+AGG | 0.387282 | 3.4:+80384004 | MS.gene067059:CDS |
| GGAGAATGGTGTCAAATTAC+TGG | 0.387636 | 3.4:+80381164 | MS.gene067059:CDS |
| GTTATCCTTCATCAGATCCT+TGG | 0.388542 | 3.4:-80383160 | None:intergenic |
| AATAAAGCAAGAAAAGCTTC+TGG | 0.390306 | 3.4:+80383948 | MS.gene067059:CDS |
| TTCTTTCTTCTCTTTGCACT+TGG | 0.393142 | 3.4:-80381564 | None:intergenic |
| ATTGAAACTGGATGTCCTTT+CGG | 0.393196 | 3.4:-80381910 | None:intergenic |
| ACCTCATGGTTCACTTCGTC+AGG | 0.399138 | 3.4:+80380960 | MS.gene067059:CDS |
| GTTCTGGTGGCGATAATAAT+GGG | 0.403199 | 3.4:+80381019 | MS.gene067059:CDS |
| GAAGTAGATGGGCTTGATAA+AGG | 0.404129 | 3.4:+80381285 | MS.gene067059:CDS |
| TGTTCTTTCTGTGACTGATA+AGG | 0.406117 | 3.4:+80383527 | MS.gene067059:CDS |
| GAAACAAGTGGGCGGTCAAA+AGG | 0.412157 | 3.4:-80381981 | None:intergenic |
| CCTATGGAATGTGAAGTAGA+TGG | 0.412757 | 3.4:+80381273 | MS.gene067059:CDS |
| ATTAACTTACCTTGCTTTGA+AGG | 0.420745 | 3.4:-80384760 | None:intergenic |
| AGAGAAAACGGAAGAGTAAG+AGG | 0.422602 | 3.4:+80381367 | MS.gene067059:CDS |
| TTATCACTTATCTGATTCAA+TGG | 0.425726 | 3.4:+80380843 | MS.gene067059:CDS |
| GAGGACATGGCGCTGTTAGA+TGG | 0.426197 | 3.4:-80383804 | None:intergenic |
| TGAAGAATAAGAAAGATAAG+AGG | 0.426865 | 3.4:+80381076 | MS.gene067059:CDS |
| CATACTCAATGTGAGGTAGA+TGG | 0.426882 | 3.4:+80382401 | MS.gene067059:CDS |
| CTTCTTCTTTGCACTTTGTA+CGG | 0.427088 | 3.4:-80382480 | None:intergenic |
| TTCTTATGATGGGAAAAGAT+TGG | 0.428177 | 3.4:+80384719 | MS.gene067059:CDS |
| ATCTGCATTCTCTGCAAAGA+TGG | 0.429838 | 3.4:-80382603 | None:intergenic |
| TAAACAAGGTGATATTGAAA+TGG | 0.432155 | 3.4:+80383110 | MS.gene067059:CDS |
| AGAAGAAGCATAAGAGTGTA+AGG | 0.435465 | 3.4:+80382495 | MS.gene067059:CDS |
| TGTCGAGTCTTGTGTGCATT+TGG | 0.436581 | 3.4:-80383762 | None:intergenic |
| AATCTTGACAAAATGGAGAT+TGG | 0.437924 | 3.4:+80383030 | MS.gene067059:CDS |
| GACTCTATTGTATGCGAGAA+AGG | 0.441711 | 3.4:+80382446 | MS.gene067059:CDS |
| GCACTTGGCACTGATATTGA+AGG | 0.443827 | 3.4:-80381549 | None:intergenic |
| TTATCCTTCATCAGATCCTT+GGG | 0.446924 | 3.4:-80383159 | None:intergenic |
| ATCGGACAAATACAGATTCA+TGG | 0.447220 | 3.4:+80380702 | MS.gene067059:CDS |
| TCCGGAAAATGCTGCAACAC+AGG | 0.447565 | 3.4:+80383440 | MS.gene067059:CDS |
| CATATCTGATGTGCTCTTTG+AGG | 0.447860 | 3.4:-80383676 | None:intergenic |
| GCACTTGGCACAGATATTGA+AGG | 0.457016 | 3.4:-80381786 | None:intergenic |
| CATACACTTAGAGCAGATAA+TGG | 0.458702 | 3.4:+80383351 | MS.gene067059:CDS |
| AAAACCAGCAAAGGAACATA+AGG | 0.459013 | 3.4:+80383296 | MS.gene067059:CDS |
| CAGTCTCCAACAAAAGAAAC+AGG | 0.460870 | 3.4:+80383078 | MS.gene067059:CDS |
| GAAGAATAAGAAAGATAAGA+GGG | 0.463642 | 3.4:+80381077 | MS.gene067059:CDS |
| AGTGTCGATTCACGACAAAA+TGG | 0.464864 | 3.4:+80384161 | MS.gene067059:CDS |
| GCTGGTAAAATCGAGGGAGC+TGG | 0.466007 | 3.4:+80383219 | MS.gene067059:CDS |
| TAATTCTATAGAACCTTTGA+AGG | 0.467020 | 3.4:+80382784 | MS.gene067059:CDS |
| GGATCTGATAAATGCATTAA+GGG | 0.470674 | 3.4:+80382422 | MS.gene067059:CDS |
| AAACCAGCAAAGGAACATAA+GGG | 0.474216 | 3.4:+80383297 | MS.gene067059:CDS |
| AGAAGCTCCAAGTTTACCTA+TGG | 0.479624 | 3.4:+80381257 | MS.gene067059:CDS |
| ACTGGATCAGGTTCTTATGA+TGG | 0.480969 | 3.4:+80384708 | MS.gene067059:intron |
| CTCTTGACCTTCATCTTCAG+AGG | 0.482855 | 3.4:-80384057 | None:intergenic |
| TCACATTCCATAGGTAAACT+TGG | 0.484317 | 3.4:-80381264 | None:intergenic |
| GGGAGATACATCATCTCAAA+AGG | 0.486619 | 3.4:+80382805 | MS.gene067059:CDS |
| ATTGTGAATAATGCTTTAGT+TGG | 0.487927 | 3.4:+80380997 | MS.gene067059:CDS |
| TAAAGAAGAAGCCTAAGAAA+AGG | 0.490052 | 3.4:+80382744 | MS.gene067059:CDS |
| TCACATTCAATATTTAAACT+TGG | 0.490981 | 3.4:-80381471 | None:intergenic |
| TTATTGGTGTCAACAAAAGC+TGG | 0.491773 | 3.4:+80380881 | MS.gene067059:CDS |
| CTGGTAAAATCGAGGGAGCT+GGG | 0.497522 | 3.4:+80383220 | MS.gene067059:CDS |
| ACCTCAATCAAGGAACAAAC+AGG | 0.501114 | 3.4:+80381944 | MS.gene067059:CDS |
| TCACATTCAATATGTAAACT+TGG | 0.505226 | 3.4:-80381708 | None:intergenic |
| TGAACTTGTAAGTAAGAGAC+TGG | 0.506719 | 3.4:+80383623 | MS.gene067059:CDS |
| AATATCGCAACAATGCTTCT+GGG | 0.507535 | 3.4:+80383844 | MS.gene067059:CDS |
| AGAAACCGTTTGTGATCCTC+CGG | 0.507621 | 3.4:+80383422 | MS.gene067059:CDS |
| CATTGTCATGAAAGTGAAGC+TGG | 0.507765 | 3.4:+80383201 | MS.gene067059:CDS |
| TCTGTGTGCTCTGGAACACA+TGG | 0.508038 | 3.4:-80382341 | None:intergenic |
| GTTTCTGAACATACTGCTAA+AGG | 0.510342 | 3.4:+80381126 | MS.gene067059:CDS |
| CTTTCGGATGGACAATCGAC+AGG | 0.511134 | 3.4:-80381894 | None:intergenic |
| ACGGTACCGGAGTCAGAAAT+CGG | 0.513527 | 3.4:-80380449 | None:intergenic |
| AAACTGGATGCCCTTTCAGA+TGG | 0.514071 | 3.4:-80382251 | None:intergenic |
| TGCAGAGTGGGAAGAGAAAA+CGG | 0.514904 | 3.4:+80381355 | MS.gene067059:CDS |
| GATACGGCGATTCCATTGCT+TGG | 0.515224 | 3.4:+80381195 | MS.gene067059:CDS |
| TAGTGTTGATGTTTCTGCAT+TGG | 0.516697 | 3.4:+80380909 | MS.gene067059:CDS |
| TATGGATTTGGATAAACAAA+GGG | 0.516899 | 3.4:+80383872 | MS.gene067059:CDS |
| AAACAAGTGGGCGGTCAAAA+GGG | 0.517875 | 3.4:-80381980 | None:intergenic |
| CTAAATCAAACTGAAGAGGA+AGG | 0.518575 | 3.4:+80383471 | MS.gene067059:CDS |
| ATCGATGAAGACGACGGTAC+CGG | 0.519160 | 3.4:-80380462 | None:intergenic |
| CTGATGGAGCTCACGAGGAA+AGG | 0.521888 | 3.4:+80382843 | MS.gene067059:CDS |
| GATGAAGCACAAACGGCTGA+TGG | 0.523174 | 3.4:+80382827 | MS.gene067059:CDS |
| TCAAAAGGATGAAGCACAAA+CGG | 0.524012 | 3.4:+80382820 | MS.gene067059:CDS |
| GACTCTATTGTATGTGAGGA+AGG | 0.524881 | 3.4:+80382101 | MS.gene067059:CDS |
| GAGGTAGATGAATCCAATAA+AGG | 0.524924 | 3.4:+80382068 | MS.gene067059:CDS |
| CATTCTCTGCAAAGATGGCT+CGG | 0.525179 | 3.4:-80382598 | None:intergenic |
| TTTCTTTCAAAGTGTCATCT+CGG | 0.526131 | 3.4:-80382535 | None:intergenic |
| AAGGATAACGAGAATGTTGT+CGG | 0.527978 | 3.4:+80383174 | MS.gene067059:CDS |
| CACACGCATACTATTTAGAC+GGG | 0.528271 | 3.4:+80384126 | MS.gene067059:CDS |
| CTCTCGACTGTCCATCTGAA+AGG | 0.528617 | 3.4:+80382240 | MS.gene067059:CDS |
| CTATGGAATGTGAAGTAGAT+GGG | 0.530261 | 3.4:+80381274 | MS.gene067059:CDS |
| AAAATCGAGGGAGCTGGGGA+AGG | 0.530324 | 3.4:+80383225 | MS.gene067059:CDS |
| CTGGATCAGGTTCTTATGAT+GGG | 0.530685 | 3.4:+80384709 | MS.gene067059:intron |
| ACATCAGATATGCTCACAAA+TGG | 0.531038 | 3.4:+80383687 | MS.gene067059:CDS |
| TGAATCCAATAAAGGCACTA+AGG | 0.531478 | 3.4:+80382076 | MS.gene067059:CDS |
| AAAAGAAGCCACTGTGGTAG+GGG | 0.532643 | 3.4:+80381599 | MS.gene067059:CDS |
| TCTCGACTGTCCATCTGAAA+GGG | 0.532726 | 3.4:+80382241 | MS.gene067059:CDS |
| CGATGTACACAGGATTGATA+AGG | 0.533392 | 3.4:+80383737 | MS.gene067059:CDS |
| GAAACACGTGGGTGATCAGA+AGG | 0.536575 | 3.4:-80381642 | None:intergenic |
| CGATAATAACACTGCGAACG+AGG | 0.536966 | 3.4:+80382676 | MS.gene067059:CDS |
| TTAACTTACCTTGCTTTGAA+GGG | 0.537573 | 3.4:-80384759 | None:intergenic |
| TCACACGCATACTATTTAGA+CGG | 0.538385 | 3.4:+80384125 | MS.gene067059:CDS |
| GATGATGTATCTCCCTTCAA+AGG | 0.545208 | 3.4:-80382797 | None:intergenic |
| AAACTGGATGTCCTTTCGGA+TGG | 0.545328 | 3.4:-80381906 | None:intergenic |
| TTGGGCTCATTCACATCTGA+AGG | 0.553810 | 3.4:-80383141 | None:intergenic |
| TAGAGCAGATAATGGTCTTG+TGG | 0.553835 | 3.4:+80383359 | MS.gene067059:CDS |
| AATCAGATAAGTGATAAAAG+TGG | 0.555386 | 3.4:-80380837 | None:intergenic |
| ACGTCTACGATCATCTGTCT+TGG | 0.557416 | 3.4:-80381226 | None:intergenic |
| AAATAAAGATGATGATAATG+TGG | 0.557657 | 3.4:+80381308 | MS.gene067059:CDS |
| GTATGGATTTGGATAAACAA+AGG | 0.561010 | 3.4:+80383871 | MS.gene067059:CDS |
| AATAAGAAAGATAAGAGGGA+AGG | 0.561237 | 3.4:+80381081 | MS.gene067059:CDS |
| GTCGGAGACGGTATCGTGAT+CGG | 0.561541 | 3.4:-80380519 | None:intergenic |
| AACATCTAATGCTGAAAATG+TGG | 0.561789 | 3.4:+80383599 | MS.gene067059:CDS |
| TACAAACCTCGATACTCACT+TGG | 0.566654 | 3.4:+80380484 | MS.gene067059:CDS |
| TAGAGGAGATTTGAGTTCTG+AGG | 0.567085 | 3.4:-80382723 | None:intergenic |
| GTCAGATGGAGTTCTAGTGC+TGG | 0.567675 | 3.4:-80384099 | None:intergenic |
| AGCTATAAAGAATTTGGAGA+TGG | 0.567916 | 3.4:+80382022 | MS.gene067059:CDS |
| AGATGATGATAATGTGGGTG+TGG | 0.568988 | 3.4:+80381314 | MS.gene067059:CDS |
| TCTTCTAAATCAAACTGAAG+AGG | 0.569044 | 3.4:+80383467 | MS.gene067059:CDS |
| AAAGAAGTCCCTTCAAAGCA+AGG | 0.570186 | 3.4:+80384751 | MS.gene067059:CDS |
| AGCTGTCACACATTTGGAGA+TGG | 0.570498 | 3.4:+80382367 | MS.gene067059:CDS |
| AATGCTTTAGTTGGTTCTGG+TGG | 0.570622 | 3.4:+80381006 | MS.gene067059:CDS |
| GACGGTATCGTGATCGGAGA+CGG | 0.572722 | 3.4:-80380513 | None:intergenic |
| CTGTTGTTGTACCAGTTAAG+CGG | 0.572827 | 3.4:+80382567 | MS.gene067059:CDS |
| ATTCTTCAACAATTGCAACT+GGG | 0.574037 | 3.4:-80381061 | None:intergenic |
| GGTTAATGCTGTGACAATGA+AGG | 0.574150 | 3.4:+80382697 | MS.gene067059:CDS |
| TTGGAGTTTGAACCAAGCAA+TGG | 0.575376 | 3.4:-80381207 | None:intergenic |
| ATTACTGGGTGATAATGATA+CGG | 0.575467 | 3.4:+80381179 | MS.gene067059:CDS |
| CCGGAAAATGCTGCAACACA+GGG | 0.576365 | 3.4:+80383441 | MS.gene067059:CDS |
| GAAGGGATGGTAATGTTGCA+GGG | 0.579243 | 3.4:+80383489 | MS.gene067059:CDS |
| GCAACACGCAGACGATCAGA+AGG | 0.583703 | 3.4:-80381405 | None:intergenic |
| AGAAAGAGCGCGATGTACAC+AGG | 0.584380 | 3.4:+80383727 | MS.gene067059:CDS |
| CTTCAATGTCTGTGCAGAGT+GGG | 0.585400 | 3.4:+80381343 | MS.gene067059:CDS |
| TCATCCTTATTTCCTCCACC+AGG | 0.586395 | 3.4:-80381504 | None:intergenic |
| TCAAACTGAAGAGGAAGGGA+TGG | 0.587094 | 3.4:+80383476 | MS.gene067059:CDS |
| TGAGCCCAAGGATCTGATGA+AGG | 0.587164 | 3.4:+80383155 | MS.gene067059:CDS |
| TGACGACGTGAATAGAATGA+AGG | 0.588356 | 3.4:+80383266 | MS.gene067059:CDS |
| AGCAGTTCCTCTGAAGATGA+AGG | 0.592851 | 3.4:+80384050 | MS.gene067059:CDS |
| CCATCTACTTCACATTCCAT+AGG | 0.594220 | 3.4:-80381273 | None:intergenic |
| AAATTCACATATTGAATGTG+AGG | 0.595332 | 3.4:+80382049 | MS.gene067059:CDS |
| AGCTTCTGGAAATCATGTCA+TGG | 0.596316 | 3.4:+80383962 | MS.gene067059:CDS |
| AAAAGTAAGAATAAAGGCGG+AGG | 0.597083 | 3.4:+80383327 | MS.gene067059:CDS |
| GGTGTCGCGAATATGGAGAA+TGG | 0.597432 | 3.4:+80381150 | MS.gene067059:CDS |
| CAGTGTTACGTGAAACAAGT+GGG | 0.602671 | 3.4:-80381992 | None:intergenic |
| CAGAAGAAAAGCTTGTTAGA+GGG | 0.603287 | 3.4:+80384005 | MS.gene067059:CDS |
| TAAATCAAACTGAAGAGGAA+GGG | 0.603370 | 3.4:+80383472 | MS.gene067059:CDS |
| AATTCTATAGAACCTTTGAA+GGG | 0.604101 | 3.4:+80382785 | MS.gene067059:CDS |
| TCATGGTTCACTTCGTCAGG+TGG | 0.604108 | 3.4:+80380963 | MS.gene067059:CDS |
| GGATGACTCTATTGTATGTG+AGG | 0.604480 | 3.4:+80382097 | MS.gene067059:CDS |
| TTCAGATGTGAATGAGCCCA+AGG | 0.607289 | 3.4:+80383143 | MS.gene067059:CDS |
| CTTTCAGATGGACAGTCGAG+AGG | 0.612247 | 3.4:-80382239 | None:intergenic |
| GTAGGGGATAGATCAAAAGA+AGG | 0.614468 | 3.4:+80381615 | MS.gene067059:CDS |
| GAAGTAGATGGACCTGGTGG+AGG | 0.614605 | 3.4:+80381492 | MS.gene067059:CDS |
| TGTTGCAGAGCAGAATGAAA+AGG | 0.617143 | 3.4:+80381422 | MS.gene067059:CDS |
| TGAAGATGAAGGTCAAGAGA+AGG | 0.620985 | 3.4:+80384061 | MS.gene067059:CDS |
| GGAACCTGTAAAACCAGCAA+AGG | 0.623921 | 3.4:+80383287 | MS.gene067059:CDS |
| CTGTCGATTGTCCATCCGAA+AGG | 0.624082 | 3.4:+80381895 | MS.gene067059:CDS |
| AAGGGATGGTAATGTTGCAG+GGG | 0.628382 | 3.4:+80383490 | MS.gene067059:CDS |
| AATAAAGATGATGATAATGT+GGG | 0.628938 | 3.4:+80381309 | MS.gene067059:CDS |
| AACGGCTGATGGAGCTCACG+AGG | 0.630247 | 3.4:+80382838 | MS.gene067059:CDS |
| AACCAGCAAAGGAACATAAG+GGG | 0.634243 | 3.4:+80383298 | MS.gene067059:CDS |
| TGGTAAAATCGAGGGAGCTG+GGG | 0.636192 | 3.4:+80383221 | MS.gene067059:CDS |
| GAGAATGGTGTCAAATTACT+GGG | 0.636399 | 3.4:+80381165 | MS.gene067059:CDS |
| AAACACGTGGGTGATCAGAA+GGG | 0.637541 | 3.4:-80381641 | None:intergenic |
| AGTGAAGCTGGTAAAATCGA+GGG | 0.640437 | 3.4:+80383213 | MS.gene067059:CDS |
| ACCAGCAAAGGAACATAAGG+GGG | 0.644082 | 3.4:+80383299 | MS.gene067059:CDS |
| TCAGTGTTACGTGAAACAAG+TGG | 0.647489 | 3.4:-80381993 | None:intergenic |
| TATGCGTGTGAATTGTCAGA+TGG | 0.648565 | 3.4:-80384113 | None:intergenic |
| CAACACGCAGACGATCAGAA+GGG | 0.649775 | 3.4:-80381404 | None:intergenic |
| AACACGCAGACGATCAGAAG+GGG | 0.653252 | 3.4:-80381403 | None:intergenic |
| TGATCTATCCCCTACCACAG+TGG | 0.654268 | 3.4:-80381607 | None:intergenic |
| GAGGAAAGGAAAGAATCAGA+AGG | 0.654785 | 3.4:+80382857 | MS.gene067059:CDS |
| AGGGATGGTAATGTTGCAGG+GGG | 0.659114 | 3.4:+80383491 | MS.gene067059:CDS |
| TAATGCTGTGACAATGAAGG+AGG | 0.660473 | 3.4:+80382700 | MS.gene067059:CDS |
| CTTGGCACTGATATTGAAGG+TGG | 0.661039 | 3.4:-80381546 | None:intergenic |
| TGACAAAATGGAGATTGGAG+CGG | 0.661881 | 3.4:+80383035 | MS.gene067059:CDS |
| TCTTCAATGTCTGTGCAGAG+TGG | 0.662030 | 3.4:+80381342 | MS.gene067059:CDS |
| AAGTGAAGCTGGTAAAATCG+AGG | 0.665943 | 3.4:+80383212 | MS.gene067059:CDS |
| GGTTCTATAGAATTATGAGT+CGG | 0.668323 | 3.4:-80382776 | None:intergenic |
| AATTGCAACTGGGAATCACA+AGG | 0.668666 | 3.4:-80381051 | None:intergenic |
| GCAGTATGTTCAGAAACACA+AGG | 0.673143 | 3.4:-80381120 | None:intergenic |
| CTGTGTGCTCTGGAACACAT+GGG | 0.676125 | 3.4:-80382340 | None:intergenic |
| ACAGGAAATAATAATAAACA+AGG | 0.678613 | 3.4:+80383096 | MS.gene067059:CDS |
| AAATTCACATACTCAATGTG+AGG | 0.682423 | 3.4:+80382394 | MS.gene067059:CDS |
| GCGACGCCGATTTCTGACTC+CGG | 0.688844 | 3.4:+80380443 | MS.gene067059:CDS |
| TCAGTGTGCTCTGAAACACG+TGG | 0.697465 | 3.4:-80381654 | None:intergenic |
| TCTGAACATACTGCTAAAGG+AGG | 0.700816 | 3.4:+80381129 | MS.gene067059:CDS |
| GAATGTGAAGTAGATGGACC+TGG | 0.706472 | 3.4:+80381486 | MS.gene067059:CDS |
| CAGTATGTTCAGAAACACAA+GGG | 0.708570 | 3.4:-80381119 | None:intergenic |
| TGAGAGCCAAGTGAGTATCG+AGG | 0.730669 | 3.4:-80380490 | None:intergenic |
| CAGTGTGCTCTGAAACACGT+GGG | 0.731588 | 3.4:-80381653 | None:intergenic |
| TGTGAAGTAGATGGACCTGG+TGG | 0.732563 | 3.4:+80381489 | MS.gene067059:CDS |
| GTTTGTATCGATGAAGACGA+CGG | 0.749057 | 3.4:-80380468 | None:intergenic |
| TGTTACGTGAAACAAGTGGG+CGG | 0.765301 | 3.4:-80381989 | None:intergenic |
| ACCTGACGAAGTGAACCATG+AGG | 0.777791 | 3.4:-80380961 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAACACAAAAATTAAT+AGG | - | chr3.4:80382923-80382942 | None:intergenic | 10.0% |
| !! | GTAAAAAAAAGTAAGAATAA+AGG | + | chr3.4:80383321-80383340 | MS.gene067059:CDS | 15.0% |
| !! | AAAAAAAGTAAGAATAAAGG+CGG | + | chr3.4:80383324-80383343 | MS.gene067059:CDS | 20.0% |
| !! | AAAAGAAGCTATAAAGAATT+TGG | + | chr3.4:80382016-80382035 | MS.gene067059:CDS | 20.0% |
| !! | ACAGGAAATAATAATAAACA+AGG | + | chr3.4:80383096-80383115 | MS.gene067059:CDS | 20.0% |
| !! | CCACAAAAATAACAATAATT+GGG | - | chr3.4:80382986-80383005 | None:intergenic | 20.0% |
| !! | TAACACAAAAATTAATAGGA+AGG | - | chr3.4:80382919-80382938 | None:intergenic | 20.0% |
| !! | TCACATTCAATATTTAAACT+TGG | - | chr3.4:80381474-80381493 | None:intergenic | 20.0% |
| !!! | AAATAAAGATGATGATAATG+TGG | + | chr3.4:80381308-80381327 | MS.gene067059:CDS | 20.0% |
| !!! | AATAAAGATGATGATAATGT+GGG | + | chr3.4:80381309-80381328 | MS.gene067059:CDS | 20.0% |
| !!! | AATTTTTCTGTTAACTACTT+GGG | + | chr3.4:80384491-80384510 | MS.gene067059:intron | 20.0% |
| !!! | CCAATTATTGTTATTTTTGT+GGG | + | chr3.4:80382984-80383003 | MS.gene067059:intron | 20.0% |
| !!! | TAATTTTTCTGTTAACTACT+TGG | + | chr3.4:80384490-80384509 | MS.gene067059:intron | 20.0% |
| !!! | TTTATTTTGAACCATTTTGT+TGG | - | chr3.4:80383934-80383953 | None:intergenic | 20.0% |
| ! | AAAGAAAAAAAAAGACACTG+TGG | + | chr3.4:80382175-80382194 | MS.gene067059:CDS | 25.0% |
| ! | AAAGAATAAGAAAAACACTG+TGG | + | chr3.4:80381830-80381849 | MS.gene067059:CDS | 25.0% |
| ! | AAATTCACATATTGAATGTG+AGG | + | chr3.4:80382049-80382068 | MS.gene067059:CDS | 25.0% |
| ! | AAGAAAAAAAAAGACACTGT+GGG | + | chr3.4:80382176-80382195 | MS.gene067059:CDS | 25.0% |
| ! | AAGAATAAGAAAAACACTGT+GGG | + | chr3.4:80381831-80381850 | MS.gene067059:CDS | 25.0% |
| ! | AATATTGAATGTGAAGTAGA+TGG | + | chr3.4:80381480-80381499 | MS.gene067059:CDS | 25.0% |
| ! | AATCAGATAAGTGATAAAAG+TGG | - | chr3.4:80380840-80380859 | None:intergenic | 25.0% |
| ! | AATCATTATTTGAACAACAG+TGG | - | chr3.4:80380751-80380770 | None:intergenic | 25.0% |
| ! | AATGAAAAATTGTTACCTCA+TGG | + | chr3.4:80380946-80380965 | MS.gene067059:CDS | 25.0% |
| ! | AATTCTATAGAACCTTTGAA+GGG | + | chr3.4:80382785-80382804 | MS.gene067059:CDS | 25.0% |
| ! | AGTGGATACAAATATTCTTT+GGG | + | chr3.4:80384239-80384258 | MS.gene067059:intron | 25.0% |
| ! | ATCAACAGATACATTAATGA+AGG | - | chr3.4:80384217-80384236 | None:intergenic | 25.0% |
| ! | ATGAAAAATGAAACTGAGTA+TGG | - | chr3.4:80384881-80384900 | None:intergenic | 25.0% |
| ! | ATTGTGAATAATGCTTTAGT+TGG | + | chr3.4:80380997-80381016 | MS.gene067059:CDS | 25.0% |
| ! | CCCACAAAAATAACAATAAT+TGG | - | chr3.4:80382987-80383006 | None:intergenic | 25.0% |
| ! | GAAGAATAAGAAAGATAAGA+GGG | + | chr3.4:80381077-80381096 | MS.gene067059:CDS | 25.0% |
| ! | TAAACAAGGTGATATTGAAA+TGG | + | chr3.4:80383110-80383129 | MS.gene067059:CDS | 25.0% |
| ! | TAATGTATCTGTTGATATAG+TGG | + | chr3.4:80384221-80384240 | MS.gene067059:intron | 25.0% |
| ! | TAATTCTATAGAACCTTTGA+AGG | + | chr3.4:80382784-80382803 | MS.gene067059:CDS | 25.0% |
| ! | TATGGATTTGGATAAACAAA+GGG | + | chr3.4:80383872-80383891 | MS.gene067059:CDS | 25.0% |
| ! | TCACATTCAATATGTAAACT+TGG | - | chr3.4:80381711-80381730 | None:intergenic | 25.0% |
| ! | TCACATTCAATATGTGAATT+TGG | - | chr3.4:80382050-80382069 | None:intergenic | 25.0% |
| ! | TGAAGAATAAGAAAGATAAG+AGG | + | chr3.4:80381076-80381095 | MS.gene067059:CDS | 25.0% |
| ! | TGCAGATAAAGAAGTAATTA+AGG | + | chr3.4:80382619-80382638 | MS.gene067059:CDS | 25.0% |
| ! | TTATCACTTATCTGATTCAA+TGG | + | chr3.4:80380843-80380862 | MS.gene067059:CDS | 25.0% |
| !! | CGTTGATAAATTCTATCAAT+TGG | + | chr3.4:80384941-80384960 | MS.gene067059:CDS | 25.0% |
| !! | TAGTGGATACAAATATTCTT+TGG | + | chr3.4:80384238-80384257 | MS.gene067059:intron | 25.0% |
| !! | TGAGGTAACAATTTTTCATT+CGG | - | chr3.4:80380946-80380965 | None:intergenic | 25.0% |
| !! | TTTTCGATTTTCAACAATTG+AGG | - | chr3.4:80383826-80383845 | None:intergenic | 25.0% |
| !!! | CCCAATTATTGTTATTTTTG+TGG | + | chr3.4:80382983-80383002 | MS.gene067059:intron | 25.0% |
| !!! | TATTCGTTTTTGTTTCTGTT+AGG | + | chr3.4:80380801-80380820 | MS.gene067059:intron | 25.0% |
| !!! | TTATTTCCTGTTTCTTTTGT+TGG | - | chr3.4:80383087-80383106 | None:intergenic | 25.0% |
| AAAGATCAGATCTCAATGAA+TGG | - | chr3.4:80384350-80384369 | None:intergenic | 30.0% | |
| AAAGGATGCTGTCAAAAATT+CGG | + | chr3.4:80381440-80381459 | MS.gene067059:CDS | 30.0% | |
| AAATTCACATACTCAATGTG+AGG | + | chr3.4:80382394-80382413 | MS.gene067059:CDS | 30.0% | |
| AACATCTAATGCTGAAAATG+TGG | + | chr3.4:80383599-80383618 | MS.gene067059:CDS | 30.0% | |
| AAGATCAGATCTCAATGAAT+GGG | - | chr3.4:80384349-80384368 | None:intergenic | 30.0% | |
| AATAAAGCAAGAAAAGCTTC+TGG | + | chr3.4:80383948-80383967 | MS.gene067059:CDS | 30.0% | |
| AATAAGAAAGATAAGAGGGA+AGG | + | chr3.4:80381081-80381100 | MS.gene067059:CDS | 30.0% | |
| AATACAGATTCATGGCATTA+AGG | + | chr3.4:80380710-80380729 | MS.gene067059:CDS | 30.0% | |
| AATCTTGACAAAATGGAGAT+TGG | + | chr3.4:80383030-80383049 | MS.gene067059:CDS | 30.0% | |
| AGAAGCTGTGAAAAATTTAG+AGG | + | chr3.4:80381680-80381699 | MS.gene067059:CDS | 30.0% | |
| AGCTATAAAGAATTTGGAGA+TGG | + | chr3.4:80382022-80382041 | MS.gene067059:CDS | 30.0% | |
| ATCTTGCCTCTTCATAAAAA+TGG | + | chr3.4:80384637-80384656 | MS.gene067059:intron | 30.0% | |
| ATTAACTTACCTTGCTTTGA+AGG | - | chr3.4:80384763-80384782 | None:intergenic | 30.0% | |
| ATTCATTGAGATCTGATCTT+TGG | + | chr3.4:80384349-80384368 | MS.gene067059:intron | 30.0% | |
| ATTCTTCAACAATTGCAACT+GGG | - | chr3.4:80381064-80381083 | None:intergenic | 30.0% | |
| CAAAACGAATCTTGACAAAA+TGG | + | chr3.4:80383023-80383042 | MS.gene067059:CDS | 30.0% | |
| CAGAAAAATTACCAAGTATG+CGG | - | chr3.4:80384481-80384500 | None:intergenic | 30.0% | |
| CAGTTTGATACAAAAAGAGA+GGG | - | chr3.4:80384692-80384711 | None:intergenic | 30.0% | |
| CATATTGAATGTGAAGTAGA+TGG | + | chr3.4:80381717-80381736 | MS.gene067059:CDS | 30.0% | |
| GGATCTGATAAATGCATTAA+GGG | + | chr3.4:80382422-80382441 | MS.gene067059:CDS | 30.0% | |
| GGTTCTATAGAATTATGAGT+CGG | - | chr3.4:80382779-80382798 | None:intergenic | 30.0% | |
| GTATGGATTTGGATAAACAA+AGG | + | chr3.4:80383871-80383890 | MS.gene067059:CDS | 30.0% | |
| TAAAGAAGAAGCCTAAGAAA+AGG | + | chr3.4:80382744-80382763 | MS.gene067059:CDS | 30.0% | |
| TAAATCAAACTGAAGAGGAA+GGG | + | chr3.4:80383472-80383491 | MS.gene067059:CDS | 30.0% | |
| TACCTGAAAATCATTGAAAC+TGG | - | chr3.4:80381925-80381944 | None:intergenic | 30.0% | |
| TATTCTTCAACAATTGCAAC+TGG | - | chr3.4:80381065-80381084 | None:intergenic | 30.0% | |
| TCACATTGAGTATGTGAATT+TGG | - | chr3.4:80382395-80382414 | None:intergenic | 30.0% | |
| TCCAGTAGATAAGAAAATAG+TGG | - | chr3.4:80384517-80384536 | None:intergenic | 30.0% | |
| TCTTCTAAATCAAACTGAAG+AGG | + | chr3.4:80383467-80383486 | MS.gene067059:CDS | 30.0% | |
| TGGATCTGATAAATGCATTA+AGG | + | chr3.4:80382421-80382440 | MS.gene067059:CDS | 30.0% | |
| TTCATGCTTCTTATATGTAG+AGG | + | chr3.4:80380644-80380663 | MS.gene067059:intron | 30.0% | |
| TTCTAACTAACTGTGTTATG+AGG | + | chr3.4:80384274-80384293 | MS.gene067059:intron | 30.0% | |
| TTCTGTTAGGTTAAACGTAA+TGG | + | chr3.4:80380814-80380833 | MS.gene067059:intron | 30.0% | |
| ! | AAAATGGTGATGTCAAACTT+TGG | + | chr3.4:80384653-80384672 | MS.gene067059:intron | 30.0% |
| ! | AATAATGCTTTAGTTGGTTC+TGG | + | chr3.4:80381003-80381022 | MS.gene067059:CDS | 30.0% |
| ! | AATCTGTATTTGTCCGATTT+TGG | - | chr3.4:80380700-80380719 | None:intergenic | 30.0% |
| ! | ATCATCCTTATTTCTTTCAC+TGG | - | chr3.4:80381745-80381764 | None:intergenic | 30.0% |
| ! | ATCCAGTTTCAACAATTTTC+AGG | + | chr3.4:80382265-80382284 | MS.gene067059:CDS | 30.0% |
| ! | ATCCAGTTTCAATGATTTTC+AGG | + | chr3.4:80381920-80381939 | MS.gene067059:CDS | 30.0% |
| ! | ATCTGTATTTGTCCGATTTT+GGG | - | chr3.4:80380699-80380718 | None:intergenic | 30.0% |
| ! | ATTACTGGGTGATAATGATA+CGG | + | chr3.4:80381179-80381198 | MS.gene067059:CDS | 30.0% |
| ! | ATTTTCAACAATTGAGGACA+TGG | - | chr3.4:80383820-80383839 | None:intergenic | 30.0% |
| ! | TTAACTTACCTTGCTTTGAA+GGG | - | chr3.4:80384762-80384781 | None:intergenic | 30.0% |
| ! | TTCTTATGATGGGAAAAGAT+TGG | + | chr3.4:80384719-80384738 | MS.gene067059:CDS | 30.0% |
| ! | TTCTTCTTTTTCTTTGCACT+TGG | - | chr3.4:80382143-80382162 | None:intergenic | 30.0% |
| ! | TTTCTTTCAAAGTGTCATCT+CGG | - | chr3.4:80382538-80382557 | None:intergenic | 30.0% |
| ! | TTTTTGTATCAAACTGGATC+AGG | + | chr3.4:80384696-80384715 | MS.gene067059:intron | 30.0% |
| !! | ACATCACCATTTTTATGAAG+AGG | - | chr3.4:80384646-80384665 | None:intergenic | 30.0% |
| !! | GTAGAAGATTGTTTGTTGTT+TGG | - | chr3.4:80383657-80383676 | None:intergenic | 30.0% |
| AAAAAAAAAGACACTGTGGG+AGG | + | chr3.4:80382179-80382198 | MS.gene067059:CDS | 35.0% | |
| AAAACCAGCAAAGGAACATA+AGG | + | chr3.4:80383296-80383315 | MS.gene067059:CDS | 35.0% | |
| AAAAGTAAGAATAAAGGCGG+AGG | + | chr3.4:80383327-80383346 | MS.gene067059:CDS | 35.0% | |
| AAACCAGCAAAGGAACATAA+GGG | + | chr3.4:80383297-80383316 | MS.gene067059:CDS | 35.0% | |
| AAAGAAAAAAGAAGCCACTG+TGG | + | chr3.4:80381593-80381612 | MS.gene067059:CDS | 35.0% | |
| AAATATCGCAACAATGCTTC+TGG | + | chr3.4:80383843-80383862 | MS.gene067059:CDS | 35.0% | |
| AAGGATAACGAGAATGTTGT+CGG | + | chr3.4:80383174-80383193 | MS.gene067059:CDS | 35.0% | |
| AATAAGAAAAACACTGTGGG+AGG | + | chr3.4:80381834-80381853 | MS.gene067059:CDS | 35.0% | |
| AATATCGCAACAATGCTTCT+GGG | + | chr3.4:80383844-80383863 | MS.gene067059:CDS | 35.0% | |
| ACAAATATTCTTTGGGTGGA+TGG | + | chr3.4:80384246-80384265 | MS.gene067059:intron | 35.0% | |
| ACATCAGATATGCTCACAAA+TGG | + | chr3.4:80383687-80383706 | MS.gene067059:CDS | 35.0% | |
| AGAAAAAGCTGTCACACATT+TGG | + | chr3.4:80382361-80382380 | MS.gene067059:CDS | 35.0% | |
| AGATCAGATCTCAATGAATG+GGG | - | chr3.4:80384348-80384367 | None:intergenic | 35.0% | |
| AGCTGTGAAAAATTTAGAGG+TGG | + | chr3.4:80381683-80381702 | MS.gene067059:CDS | 35.0% | |
| AGGTGATACTACTCAGTAAA+TGG | + | chr3.4:80382877-80382896 | MS.gene067059:intron | 35.0% | |
| ATCGGACAAATACAGATTCA+TGG | + | chr3.4:80380702-80380721 | MS.gene067059:CDS | 35.0% | |
| ATTGAAACTGGATGTCCTTT+CGG | - | chr3.4:80381913-80381932 | None:intergenic | 35.0% | |
| ATTTCAACTGCAAAGCTTGA+AGG | + | chr3.4:80383906-80383925 | MS.gene067059:CDS | 35.0% | |
| CACCTGAAAATTGTTGAAAC+TGG | - | chr3.4:80382270-80382289 | None:intergenic | 35.0% | |
| CAGTATGTTCAGAAACACAA+GGG | - | chr3.4:80381122-80381141 | None:intergenic | 35.0% | |
| CATACACTTAGAGCAGATAA+TGG | + | chr3.4:80383351-80383370 | MS.gene067059:CDS | 35.0% | |
| CCAGTTTGATACAAAAAGAG+AGG | - | chr3.4:80384693-80384712 | None:intergenic | 35.0% | |
| CTAAATCAAACTGAAGAGGA+AGG | + | chr3.4:80383471-80383490 | MS.gene067059:CDS | 35.0% | |
| CTATGGAATGTGAAGTAGAT+GGG | + | chr3.4:80381274-80381293 | MS.gene067059:CDS | 35.0% | |
| CTTCTTCTTTGCACTTTGTA+CGG | - | chr3.4:80382483-80382502 | None:intergenic | 35.0% | |
| CTTTCATGCTTTCCCAAAAT+CGG | + | chr3.4:80380684-80380703 | MS.gene067059:CDS | 35.0% | |
| GAGGTAGATGAATCCAATAA+AGG | + | chr3.4:80382068-80382087 | MS.gene067059:CDS | 35.0% | |
| GGACTTACTCAGAAAACTTT+CGG | + | chr3.4:80384534-80384553 | MS.gene067059:intron | 35.0% | |
| GGATACAAATATTCTTTGGG+TGG | + | chr3.4:80384242-80384261 | MS.gene067059:intron | 35.0% | |
| GGTGATACTACTCAGTAAAT+GGG | + | chr3.4:80382878-80382897 | MS.gene067059:intron | 35.0% | |
| GTTCTTTCTGTGACTGATAA+GGG | + | chr3.4:80383528-80383547 | MS.gene067059:CDS | 35.0% | |
| GTTTCTGAACATACTGCTAA+AGG | + | chr3.4:80381126-80381145 | MS.gene067059:CDS | 35.0% | |
| TCAAAAGGATGAAGCACAAA+CGG | + | chr3.4:80382820-80382839 | MS.gene067059:CDS | 35.0% | |
| TCAAGCTTTGCAGTTGAAAT+AGG | - | chr3.4:80383906-80383925 | None:intergenic | 35.0% | |
| TCACACGCATACTATTTAGA+CGG | + | chr3.4:80384125-80384144 | MS.gene067059:CDS | 35.0% | |
| TCACATTCCATAGGTAAACT+TGG | - | chr3.4:80381267-80381286 | None:intergenic | 35.0% | |
| TGAACTTGTAAGTAAGAGAC+TGG | + | chr3.4:80383623-80383642 | MS.gene067059:CDS | 35.0% | |
| TGGATCCAGTGAAAGAAATA+AGG | + | chr3.4:80381737-80381756 | MS.gene067059:CDS | 35.0% | |
| TGTTCTTTCTGTGACTGATA+AGG | + | chr3.4:80383527-80383546 | MS.gene067059:CDS | 35.0% | |
| TTATCCTTCATCAGATCCTT+GGG | - | chr3.4:80383162-80383181 | None:intergenic | 35.0% | |
| TTCTTAGGCTTCTTCTTTAG+AGG | - | chr3.4:80382743-80382762 | None:intergenic | 35.0% | |
| TTCTTTCTTCTCTTTGCACT+TGG | - | chr3.4:80381567-80381586 | None:intergenic | 35.0% | |
| ! | AGAAGAAGCATAAGAGTGTA+AGG | + | chr3.4:80382495-80382514 | MS.gene067059:CDS | 35.0% |
| ! | CCTCTCTTTTTGTATCAAAC+TGG | + | chr3.4:80384690-80384709 | MS.gene067059:intron | 35.0% |
| ! | GAGAATGGTGTCAAATTACT+GGG | + | chr3.4:80381165-80381184 | MS.gene067059:CDS | 35.0% |
| ! | GCCACTATTTTCTTATCTAC+TGG | + | chr3.4:80384513-80384532 | MS.gene067059:intron | 35.0% |
| ! | TTCTGGGAAAAGTATGGATT+TGG | + | chr3.4:80383860-80383879 | MS.gene067059:CDS | 35.0% |
| !! | AGAGAGAGAGATTACTTTTG+AGG | - | chr3.4:80380544-80380563 | None:intergenic | 35.0% |
| !! | CAGAAGAAAAGCTTGTTAGA+GGG | + | chr3.4:80384005-80384024 | MS.gene067059:CDS | 35.0% |
| !! | TAAGGCAACTGAAGTTTTGA+AGG | + | chr3.4:80382637-80382656 | MS.gene067059:CDS | 35.0% |
| !! | TAGTGTTGATGTTTCTGCAT+TGG | + | chr3.4:80380909-80380928 | MS.gene067059:CDS | 35.0% |
| !! | TGAATCCAATAAAGGCACTA+AGG | + | chr3.4:80382076-80382095 | MS.gene067059:CDS | 35.0% |
| !! | TTATTGGTGTCAACAAAAGC+TGG | + | chr3.4:80380881-80380900 | MS.gene067059:CDS | 35.0% |
| !!! | AGAGAGATTACTTTTGAGGT+CGG | - | chr3.4:80380540-80380559 | None:intergenic | 35.0% |
| !!! | ATTTTCAGGTACCTCAATCA+AGG | + | chr3.4:80381934-80381953 | MS.gene067059:CDS | 35.0% |
| !!! | GTTGTGAGAAGTGCTTTTAT+TGG | + | chr3.4:80380865-80380884 | MS.gene067059:CDS | 35.0% |
| !!! | TGTTGTTTTAGTTTGCTCCA+AGG | - | chr3.4:80383583-80383602 | None:intergenic | 35.0% |
| !!! | TTGCTTTTTCTCTTTGCACT+TGG | - | chr3.4:80381804-80381823 | None:intergenic | 35.0% |
| AAAAAAGAAGCCACTGTGGT+AGG | + | chr3.4:80381597-80381616 | MS.gene067059:CDS | 40.0% | |
| AAAAAGAAGCCACTGTGGTA+GGG | + | chr3.4:80381598-80381617 | MS.gene067059:CDS | 40.0% | |
| AAAGAAGTCCCTTCAAAGCA+AGG | + | chr3.4:80384751-80384770 | MS.gene067059:CDS | 40.0% | |
| AACCAGCAAAGGAACATAAG+GGG | + | chr3.4:80383298-80383317 | MS.gene067059:CDS | 40.0% | |
| AAGTGAAGCTGGTAAAATCG+AGG | + | chr3.4:80383212-80383231 | MS.gene067059:CDS | 40.0% | |
| AATTGCAACTGGGAATCACA+AGG | - | chr3.4:80381054-80381073 | None:intergenic | 40.0% | |
| ACCTCAATCAAGGAACAAAC+AGG | + | chr3.4:80381944-80381963 | MS.gene067059:CDS | 40.0% | |
| ACTGGATCAGGTTCTTATGA+TGG | + | chr3.4:80384708-80384727 | MS.gene067059:intron | 40.0% | |
| AGAAGCTCCAAGTTTACCTA+TGG | + | chr3.4:80381257-80381276 | MS.gene067059:CDS | 40.0% | |
| AGAGAAAACGGAAGAGTAAG+AGG | + | chr3.4:80381367-80381386 | MS.gene067059:CDS | 40.0% | |
| AGTGAAGCTGGTAAAATCGA+GGG | + | chr3.4:80383213-80383232 | MS.gene067059:CDS | 40.0% | |
| ATCTGCATTCTCTGCAAAGA+TGG | - | chr3.4:80382606-80382625 | None:intergenic | 40.0% | |
| CACACGCATACTATTTAGAC+GGG | + | chr3.4:80384126-80384145 | MS.gene067059:CDS | 40.0% | |
| CAGTCTCCAACAAAAGAAAC+AGG | + | chr3.4:80383078-80383097 | MS.gene067059:CDS | 40.0% | |
| CAGTGTTACGTGAAACAAGT+GGG | - | chr3.4:80381995-80382014 | None:intergenic | 40.0% | |
| CATACTCAATGTGAGGTAGA+TGG | + | chr3.4:80382401-80382420 | MS.gene067059:CDS | 40.0% | |
| CATATCTGATGTGCTCTTTG+AGG | - | chr3.4:80383679-80383698 | None:intergenic | 40.0% | |
| CATTGTCATGAAAGTGAAGC+TGG | + | chr3.4:80383201-80383220 | MS.gene067059:CDS | 40.0% | |
| CCATCTACTTCACATTCCAT+AGG | - | chr3.4:80381276-80381295 | None:intergenic | 40.0% | |
| CCTATGGAATGTGAAGTAGA+TGG | + | chr3.4:80381273-80381292 | MS.gene067059:CDS | 40.0% | |
| CGATGTACACAGGATTGATA+AGG | + | chr3.4:80383737-80383756 | MS.gene067059:CDS | 40.0% | |
| CTGGATCAGGTTCTTATGAT+GGG | + | chr3.4:80384709-80384728 | MS.gene067059:intron | 40.0% | |
| CTGTTGTTGTACCAGTTAAG+CGG | + | chr3.4:80382567-80382586 | MS.gene067059:CDS | 40.0% | |
| GAACACATGGGCAATCAAAA+AGG | - | chr3.4:80382331-80382350 | None:intergenic | 40.0% | |
| GACTCTATTGTATGCGAGAA+AGG | + | chr3.4:80382446-80382465 | MS.gene067059:CDS | 40.0% | |
| GACTCTATTGTATGTGAGGA+AGG | + | chr3.4:80382101-80382120 | MS.gene067059:CDS | 40.0% | |
| GAGGAAAGGAAAGAATCAGA+AGG | + | chr3.4:80382857-80382876 | MS.gene067059:CDS | 40.0% | |
| GATGATGTATCTCCCTTCAA+AGG | - | chr3.4:80382800-80382819 | None:intergenic | 40.0% | |
| GCAGTATGTTCAGAAACACA+AGG | - | chr3.4:80381123-80381142 | None:intergenic | 40.0% | |
| GCTTGAAGGTTCCAACAAAA+TGG | + | chr3.4:80383920-80383939 | MS.gene067059:CDS | 40.0% | |
| GGATGACTCTATTGTATGTG+AGG | + | chr3.4:80382097-80382116 | MS.gene067059:CDS | 40.0% | |
| GGGAGATACATCATCTCAAA+AGG | + | chr3.4:80382805-80382824 | MS.gene067059:CDS | 40.0% | |
| GGTTAATGCTGTGACAATGA+AGG | + | chr3.4:80382697-80382716 | MS.gene067059:CDS | 40.0% | |
| GTAGGGGATAGATCAAAAGA+AGG | + | chr3.4:80381615-80381634 | MS.gene067059:CDS | 40.0% | |
| GTCATCCTTAGTGCCTTTAT+TGG | - | chr3.4:80382084-80382103 | None:intergenic | 40.0% | |
| GTTATCCTTCATCAGATCCT+TGG | - | chr3.4:80383163-80383182 | None:intergenic | 40.0% | |
| TAATGCTGTGACAATGAAGG+AGG | + | chr3.4:80382700-80382719 | MS.gene067059:CDS | 40.0% | |
| TACAAACCTCGATACTCACT+TGG | + | chr3.4:80380484-80380503 | MS.gene067059:CDS | 40.0% | |
| TATGCGTGTGAATTGTCAGA+TGG | - | chr3.4:80384116-80384135 | None:intergenic | 40.0% | |
| TCAGTGTTACGTGAAACAAG+TGG | - | chr3.4:80381996-80382015 | None:intergenic | 40.0% | |
| TCCTGTTTGTTCCTTGATTG+AGG | - | chr3.4:80381948-80381967 | None:intergenic | 40.0% | |
| TCTCAATGAATGGGGTGAAA+AGG | - | chr3.4:80384340-80384359 | None:intergenic | 40.0% | |
| TCTGAACATACTGCTAAAGG+AGG | + | chr3.4:80381129-80381148 | MS.gene067059:CDS | 40.0% | |
| TGAAGATGAAGGTCAAGAGA+AGG | + | chr3.4:80384061-80384080 | MS.gene067059:CDS | 40.0% | |
| TGACAAAATGGAGATTGGAG+CGG | + | chr3.4:80383035-80383054 | MS.gene067059:CDS | 40.0% | |
| TGACGACGTGAATAGAATGA+AGG | + | chr3.4:80383266-80383285 | MS.gene067059:CDS | 40.0% | |
| TGCTGTCAAAAATTCGGAGA+TGG | + | chr3.4:80381446-80381465 | MS.gene067059:CDS | 40.0% | |
| TGTTGCAGAGCAGAATGAAA+AGG | + | chr3.4:80381422-80381441 | MS.gene067059:CDS | 40.0% | |
| TTGGAGTTTGAACCAAGCAA+TGG | - | chr3.4:80381210-80381229 | None:intergenic | 40.0% | |
| ! | AGATGATGATAATGTGGGTG+TGG | + | chr3.4:80381314-80381333 | MS.gene067059:CDS | 40.0% |
| ! | AGCTTCTGGAAATCATGTCA+TGG | + | chr3.4:80383962-80383981 | MS.gene067059:CDS | 40.0% |
| ! | ATTTTCCGGAGGATCACAAA+CGG | - | chr3.4:80383430-80383449 | None:intergenic | 40.0% |
| ! | CAATGCTTCTGGGAAAAGTA+TGG | + | chr3.4:80383854-80383873 | MS.gene067059:CDS | 40.0% |
| ! | GAAGTAGATGGGCTTGATAA+AGG | + | chr3.4:80381285-80381304 | MS.gene067059:CDS | 40.0% |
| ! | GGAGAATGGTGTCAAATTAC+TGG | + | chr3.4:80381164-80381183 | MS.gene067059:CDS | 40.0% |
| ! | GGAGATCTCTTCCTTTTCTT+AGG | - | chr3.4:80382758-80382777 | None:intergenic | 40.0% |
| ! | GTTAGAGGGAGCAATTTTCA+AGG | + | chr3.4:80384019-80384038 | MS.gene067059:CDS | 40.0% |
| ! | GTTCTGGTGGCGATAATAAT+GGG | + | chr3.4:80381019-80381038 | MS.gene067059:CDS | 40.0% |
| ! | GTTTGTATCGATGAAGACGA+CGG | - | chr3.4:80380471-80380490 | None:intergenic | 40.0% |
| ! | TAGAGCAGATAATGGTCTTG+TGG | + | chr3.4:80383359-80383378 | MS.gene067059:CDS | 40.0% |
| ! | TAGAGGAGATTTGAGTTCTG+AGG | - | chr3.4:80382726-80382745 | None:intergenic | 40.0% |
| ! | TTTTGTCGTGAATCGACACT+TGG | - | chr3.4:80384161-80384180 | None:intergenic | 40.0% |
| !! | AATGCTTTAGTTGGTTCTGG+TGG | + | chr3.4:80381006-80381025 | MS.gene067059:CDS | 40.0% |
| !! | AGTGTCGATTCACGACAAAA+TGG | + | chr3.4:80384161-80384180 | MS.gene067059:CDS | 40.0% |
| !! | CTATTCACGTCGTCATTTTG+TGG | - | chr3.4:80383261-80383280 | None:intergenic | 40.0% |
| !! | CTTTTTCTTTGCACTTGGTG+CGG | - | chr3.4:80382138-80382157 | None:intergenic | 40.0% |
| !! | GCAGAAGAAAAGCTTGTTAG+AGG | + | chr3.4:80384004-80384023 | MS.gene067059:CDS | 40.0% |
| !! | TAAGGGAAGTGATTTTAGCG+CGG | + | chr3.4:80383545-80383564 | MS.gene067059:CDS | 40.0% |
| !!! | ATTACTTTTGAGGTCGGAGA+CGG | - | chr3.4:80380534-80380553 | None:intergenic | 40.0% |
| !!! | TGTTCCTTTGCTGGTTTTAC+AGG | - | chr3.4:80383294-80383313 | None:intergenic | 40.0% |
| !!! | TTTTTCTTTGCACTTGGTGC+GGG | - | chr3.4:80382137-80382156 | None:intergenic | 40.0% |
| AAAAGAAGCCACTGTGGTAG+GGG | + | chr3.4:80381599-80381618 | MS.gene067059:CDS | 45.0% | |
| AAACAAGTGGGCGGTCAAAA+GGG | - | chr3.4:80381983-80382002 | None:intergenic | 45.0% | |
| AAACACGTGGGTGATCAGAA+GGG | - | chr3.4:80381644-80381663 | None:intergenic | 45.0% | |
| AAACTGGATGCCCTTTCAGA+TGG | - | chr3.4:80382254-80382273 | None:intergenic | 45.0% | |
| AAACTGGATGTCCTTTCGGA+TGG | - | chr3.4:80381909-80381928 | None:intergenic | 45.0% | |
| ACCAGCAAAGGAACATAAGG+GGG | + | chr3.4:80383299-80383318 | MS.gene067059:CDS | 45.0% | |
| ACGTCTACGATCATCTGTCT+TGG | - | chr3.4:80381229-80381248 | None:intergenic | 45.0% | |
| AGAAACCGTTTGTGATCCTC+CGG | + | chr3.4:80383422-80383441 | MS.gene067059:CDS | 45.0% | |
| AGCTGTCACACATTTGGAGA+TGG | + | chr3.4:80382367-80382386 | MS.gene067059:CDS | 45.0% | |
| ATGTTGCAGGGGGAAATACA+AGG | + | chr3.4:80383501-80383520 | MS.gene067059:CDS | 45.0% | |
| CATTCTCTGCAAAGATGGCT+CGG | - | chr3.4:80382601-80382620 | None:intergenic | 45.0% | |
| CGATAATAACACTGCGAACG+AGG | + | chr3.4:80382676-80382695 | MS.gene067059:CDS | 45.0% | |
| CGGACAATATTCCGCTTAAC+TGG | - | chr3.4:80382581-80382600 | None:intergenic | 45.0% | |
| CTCTTGACCTTCATCTTCAG+AGG | - | chr3.4:80384060-80384079 | None:intergenic | 45.0% | |
| CTTCAATGTCTGTGCAGAGT+GGG | + | chr3.4:80381343-80381362 | MS.gene067059:CDS | 45.0% | |
| CTTCGTCAGGTGGAATCTAT+TGG | + | chr3.4:80380973-80380992 | MS.gene067059:CDS | 45.0% | |
| CTTGCAGCTCTTCAAACACA+AGG | - | chr3.4:80384405-80384424 | None:intergenic | 45.0% | |
| GAATGTGAAGTAGATGGACC+TGG | + | chr3.4:80381486-80381505 | MS.gene067059:CDS | 45.0% | |
| GCACTTGGCACAGATATTGA+AGG | - | chr3.4:80381789-80381808 | None:intergenic | 45.0% | |
| GGAACCTGTAAAACCAGCAA+AGG | + | chr3.4:80383287-80383306 | MS.gene067059:CDS | 45.0% | |
| TCAAACTGAAGAGGAAGGGA+TGG | + | chr3.4:80383476-80383495 | MS.gene067059:CDS | 45.0% | |
| TCTCGACTGTCCATCTGAAA+GGG | + | chr3.4:80382241-80382260 | MS.gene067059:CDS | 45.0% | |
| TCTTCAATGTCTGTGCAGAG+TGG | + | chr3.4:80381342-80381361 | MS.gene067059:CDS | 45.0% | |
| TGCAGAGTGGGAAGAGAAAA+CGG | + | chr3.4:80381355-80381374 | MS.gene067059:CDS | 45.0% | |
| TGTTACGTGAAACAAGTGGG+CGG | - | chr3.4:80381992-80382011 | None:intergenic | 45.0% | |
| TGTTGCAGGGGGAAATACAA+GGG | + | chr3.4:80383502-80383521 | MS.gene067059:CDS | 45.0% | |
| TTCAGATGTGAATGAGCCCA+AGG | + | chr3.4:80383143-80383162 | MS.gene067059:CDS | 45.0% | |
| TTGGGCTCATTCACATCTGA+AGG | - | chr3.4:80383144-80383163 | None:intergenic | 45.0% | |
| ! | AAGGGATGGTAATGTTGCAG+GGG | + | chr3.4:80383490-80383509 | MS.gene067059:CDS | 45.0% |
| ! | AGCAGTTCCTCTGAAGATGA+AGG | + | chr3.4:80384050-80384069 | MS.gene067059:CDS | 45.0% |
| ! | GAAGGGATGGTAATGTTGCA+GGG | + | chr3.4:80383489-80383508 | MS.gene067059:CDS | 45.0% |
| ! | GGTTCTGGTGGCGATAATAA+TGG | + | chr3.4:80381018-80381037 | MS.gene067059:CDS | 45.0% |
| ! | TCATCCTTATTTCCTCCACC+AGG | - | chr3.4:80381507-80381526 | None:intergenic | 45.0% |
| ! | TGTCGAGTCTTGTGTGCATT+TGG | - | chr3.4:80383765-80383784 | None:intergenic | 45.0% |
| !! | ACAGCTTTTTCTGTGTGCTC+TGG | - | chr3.4:80382353-80382372 | None:intergenic | 45.0% |
| !! | CTTGGCACTGATATTGAAGG+TGG | - | chr3.4:80381549-80381568 | None:intergenic | 45.0% |
| !! | GCACTTGGCACTGATATTGA+AGG | - | chr3.4:80381552-80381571 | None:intergenic | 45.0% |
| !! | TAAAGGAGGTGTCGCGAATA+TGG | + | chr3.4:80381143-80381162 | MS.gene067059:CDS | 45.0% |
| !! | ATTATAAATTATAAATTAGA+AGG | - | chr3.4:80384904-80384923 | None:intergenic | 5.0% |
| AACACGCAGACGATCAGAAG+GGG | - | chr3.4:80381406-80381425 | None:intergenic | 50.0% | |
| ACAGTGCATGTCCGCATACT+TGG | + | chr3.4:80384467-80384486 | MS.gene067059:intron | 50.0% | |
| ACCCCCTTATGTTCCTTTGC+TGG | - | chr3.4:80383303-80383322 | None:intergenic | 50.0% | |
| ACCTCATGGTTCACTTCGTC+AGG | + | chr3.4:80380960-80380979 | MS.gene067059:CDS | 50.0% | |
| ACCTGACGAAGTGAACCATG+AGG | - | chr3.4:80380964-80380983 | None:intergenic | 50.0% | |
| ATCGATGAAGACGACGGTAC+CGG | - | chr3.4:80380465-80380484 | None:intergenic | 50.0% | |
| CAACACGCAGACGATCAGAA+GGG | - | chr3.4:80381407-80381426 | None:intergenic | 50.0% | |
| CCGGAAAATGCTGCAACACA+GGG | + | chr3.4:80383441-80383460 | MS.gene067059:CDS | 50.0% | |
| CTCTCGACTGTCCATCTGAA+AGG | + | chr3.4:80382240-80382259 | MS.gene067059:CDS | 50.0% | |
| CTGGTAAAATCGAGGGAGCT+GGG | + | chr3.4:80383220-80383239 | MS.gene067059:CDS | 50.0% | |
| CTTTCAGATGGACAGTCGAG+AGG | - | chr3.4:80382242-80382261 | None:intergenic | 50.0% | |
| CTTTCGGATGGACAATCGAC+AGG | - | chr3.4:80381897-80381916 | None:intergenic | 50.0% | |
| GAAACAAGTGGGCGGTCAAA+AGG | - | chr3.4:80381984-80382003 | None:intergenic | 50.0% | |
| GAAACACGTGGGTGATCAGA+AGG | - | chr3.4:80381645-80381664 | None:intergenic | 50.0% | |
| GATACGGCGATTCCATTGCT+TGG | + | chr3.4:80381195-80381214 | MS.gene067059:CDS | 50.0% | |
| GATGAAGCACAAACGGCTGA+TGG | + | chr3.4:80382827-80382846 | MS.gene067059:CDS | 50.0% | |
| TCATGGTTCACTTCGTCAGG+TGG | + | chr3.4:80380963-80380982 | MS.gene067059:CDS | 50.0% | |
| TCCGGAAAATGCTGCAACAC+AGG | + | chr3.4:80383440-80383459 | MS.gene067059:CDS | 50.0% | |
| TGAGCCCAAGGATCTGATGA+AGG | + | chr3.4:80383155-80383174 | MS.gene067059:CDS | 50.0% | |
| TGATCTATCCCCTACCACAG+TGG | - | chr3.4:80381610-80381629 | None:intergenic | 50.0% | |
| TGGACCTGGTGGAGGAAATA+AGG | + | chr3.4:80381500-80381519 | MS.gene067059:CDS | 50.0% | |
| TGGTAAAATCGAGGGAGCTG+GGG | + | chr3.4:80383221-80383240 | MS.gene067059:CDS | 50.0% | |
| TGTGAAGTAGATGGACCTGG+TGG | + | chr3.4:80381489-80381508 | MS.gene067059:CDS | 50.0% | |
| ! | ACGGTACCGGAGTCAGAAAT+CGG | - | chr3.4:80380452-80380471 | None:intergenic | 50.0% |
| ! | AGAAAGAGCGCGATGTACAC+AGG | + | chr3.4:80383727-80383746 | MS.gene067059:CDS | 50.0% |
| ! | AGGGATGGTAATGTTGCAGG+GGG | + | chr3.4:80383491-80383510 | MS.gene067059:CDS | 50.0% |
| ! | CCCTGTGTTGCAGCATTTTC+CGG | - | chr3.4:80383444-80383463 | None:intergenic | 50.0% |
| ! | CTGTCGATTGTCCATCCGAA+AGG | + | chr3.4:80381895-80381914 | MS.gene067059:CDS | 50.0% |
| ! | GGAAGGGATGGTAATGTTGC+AGG | + | chr3.4:80383488-80383507 | MS.gene067059:CDS | 50.0% |
| ! | GGTGTCGCGAATATGGAGAA+TGG | + | chr3.4:80381150-80381169 | MS.gene067059:CDS | 50.0% |
| ! | GTCAGATGGAGTTCTAGTGC+TGG | - | chr3.4:80384102-80384121 | None:intergenic | 50.0% |
| ! | TGAGAGCCAAGTGAGTATCG+AGG | - | chr3.4:80380493-80380512 | None:intergenic | 50.0% |
| ! | TGTGTTGCAGCATTTTCCGG+AGG | - | chr3.4:80383441-80383460 | None:intergenic | 50.0% |
| !! | CAGTGTGCTCTGAAACACGT+GGG | - | chr3.4:80381656-80381675 | None:intergenic | 50.0% |
| !! | CTGTGTGCTCTGGAACACAT+GGG | - | chr3.4:80382343-80382362 | None:intergenic | 50.0% |
| !! | TCAGTGTGCTCTGAAACACG+TGG | - | chr3.4:80381657-80381676 | None:intergenic | 50.0% |
| !! | TCTGTGTGCTCTGGAACACA+TGG | - | chr3.4:80382344-80382363 | None:intergenic | 50.0% |
| AAAATCGAGGGAGCTGGGGA+AGG | + | chr3.4:80383225-80383244 | MS.gene067059:CDS | 55.0% | |
| CTGATGGAGCTCACGAGGAA+AGG | + | chr3.4:80382843-80382862 | MS.gene067059:CDS | 55.0% | |
| GAAGTAGATGGACCTGGTGG+AGG | + | chr3.4:80381492-80381511 | MS.gene067059:CDS | 55.0% | |
| GACGGTATCGTGATCGGAGA+CGG | - | chr3.4:80380516-80380535 | None:intergenic | 55.0% | |
| GAGGACATGGCGCTGTTAGA+TGG | - | chr3.4:80383807-80383826 | None:intergenic | 55.0% | |
| GCAACACGCAGACGATCAGA+AGG | - | chr3.4:80381408-80381427 | None:intergenic | 55.0% | |
| GCTGGTAAAATCGAGGGAGC+TGG | + | chr3.4:80383219-80383238 | MS.gene067059:CDS | 55.0% | |
| GTCGGAGACGGTATCGTGAT+CGG | - | chr3.4:80380522-80380541 | None:intergenic | 55.0% | |
| !! | CGCGGACAATGCTGATTCCT+TGG | + | chr3.4:80383563-80383582 | MS.gene067059:CDS | 55.0% |
| AACGGCTGATGGAGCTCACG+AGG | + | chr3.4:80382838-80382857 | MS.gene067059:CDS | 60.0% | |
| !! | GCGACGCCGATTTCTGACTC+CGG | + | chr3.4:80380443-80380462 | MS.gene067059:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 80380440 | 80384981 | 80380440 | ID=MS.gene067059 |
| chr3.4 | mRNA | 80380440 | 80384981 | 80380440 | ID=MS.gene067059.t1;Parent=MS.gene067059 |
| chr3.4 | exon | 80380440 | 80380548 | 80380440 | ID=MS.gene067059.t1.exon1;Parent=MS.gene067059.t1 |
| chr3.4 | CDS | 80380440 | 80380548 | 80380440 | ID=cds.MS.gene067059.t1;Parent=MS.gene067059.t1 |
| chr3.4 | exon | 80380664 | 80380731 | 80380664 | ID=MS.gene067059.t1.exon2;Parent=MS.gene067059.t1 |
| chr3.4 | CDS | 80380664 | 80380731 | 80380664 | ID=cds.MS.gene067059.t1;Parent=MS.gene067059.t1 |
| chr3.4 | exon | 80380823 | 80382878 | 80380823 | ID=MS.gene067059.t1.exon3;Parent=MS.gene067059.t1 |
| chr3.4 | CDS | 80380823 | 80382878 | 80380823 | ID=cds.MS.gene067059.t1;Parent=MS.gene067059.t1 |
| chr3.4 | exon | 80383010 | 80384182 | 80383010 | ID=MS.gene067059.t1.exon4;Parent=MS.gene067059.t1 |
| chr3.4 | CDS | 80383010 | 80384182 | 80383010 | ID=cds.MS.gene067059.t1;Parent=MS.gene067059.t1 |
| chr3.4 | exon | 80384718 | 80384772 | 80384718 | ID=MS.gene067059.t1.exon5;Parent=MS.gene067059.t1 |
| chr3.4 | CDS | 80384718 | 80384772 | 80384718 | ID=cds.MS.gene067059.t1;Parent=MS.gene067059.t1 |
| chr3.4 | exon | 80384936 | 80384981 | 80384936 | ID=MS.gene067059.t1.exon6;Parent=MS.gene067059.t1 |
| chr3.4 | CDS | 80384936 | 80384981 | 80384936 | ID=cds.MS.gene067059.t1;Parent=MS.gene067059.t1 |
| Gene Sequence |
| Protein sequence |
