Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28381.t1 | XP_003630282.1 | 98 | 406 | 8 | 0 | 14 | 419 | 15 | 420 | 1.20E-229 | 805.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28381.t1 | Q941D6 | 70.8 | 397 | 110 | 1 | 29 | 419 | 27 | 423 | 1.8e-165 | 583.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28381.t1 | G7LE36 | 98.0 | 406 | 8 | 0 | 14 | 419 | 15 | 420 | 8.7e-230 | 805.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene28381 | 0.827126 | 1.86E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene28381 | 0.857349 | 1.73E-62 | -1.69E-46 |
| MS.gene049285 | MS.gene28381 | 0.834025 | 3.80E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene28381 | 0.828521 | 8.59E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene28381 | 0.818293 | 2.11E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene28381 | 0.801692 | 7.99E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene28381 | 0.840718 | 7.35E-58 | -1.69E-46 |
| MS.gene049865 | MS.gene28381 | 0.83381 | 4.31E-56 | -1.69E-46 |
| MS.gene05010 | MS.gene28381 | 0.828525 | 8.56E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene28381 | 0.847873 | 8.78E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene28381 | 0.839948 | 1.17E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene28381 | 0.859971 | 2.86E-63 | -1.69E-46 |
| MS.gene050502 | MS.gene28381 | 0.81878 | 1.64E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene28381 | 0.83584 | 1.33E-56 | -1.69E-46 |
| MS.gene050518 | MS.gene28381 | 0.846859 | 1.67E-59 | -1.69E-46 |
| MS.gene050577 | MS.gene28381 | 0.827614 | 1.42E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene28381 | 0.836145 | 1.11E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene28381 | 0.826385 | 2.79E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene28381 | 0.826055 | 3.35E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene28381 | 0.846934 | 1.59E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene28381 | 0.850964 | 1.21E-60 | -1.69E-46 |
| MS.gene05080 | MS.gene28381 | 0.804396 | 2.20E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene28381 | 0.830786 | 2.41E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene28381 | 0.832103 | 1.14E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene28381 | 0.809399 | 1.93E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene28381 | 0.866572 | 2.59E-65 | -1.69E-46 |
| MS.gene050986 | MS.gene28381 | 0.842865 | 1.99E-58 | -1.69E-46 |
| MS.gene052066 | MS.gene28381 | 0.806541 | 7.82E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene28381 | 0.834066 | 3.72E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene28381 | 0.851915 | 6.50E-61 | -1.69E-46 |
| MS.gene052822 | MS.gene28381 | 0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene28381 | 0.830701 | 2.53E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene28381 | 0.849208 | 3.75E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene28381 | 0.853104 | 2.98E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene28381 | 0.862183 | 6.07E-64 | -1.69E-46 |
| MS.gene053436 | MS.gene28381 | 0.822531 | 2.25E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene28381 | 0.824477 | 7.90E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene28381 | 0.873006 | 2.05E-67 | -1.69E-46 |
| MS.gene053626 | MS.gene28381 | 0.819878 | 9.22E-53 | -1.69E-46 |
| MS.gene053633 | MS.gene28381 | 0.811681 | 6.20E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene28381 | 0.815887 | 7.34E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene28381 | 0.845018 | 5.28E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene28381 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene28381 | 0.810889 | 9.21E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene28381 | 0.816769 | 4.66E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene28381 | 0.844682 | 6.50E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene28381 | 0.814045 | 1.88E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene28381 | 0.834719 | 2.55E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene28381 | 0.827379 | 1.62E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene28381 | 0.824569 | 7.52E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene28381 | 0.822793 | 1.96E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene28381 | 0.821163 | 4.67E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene28381 | 0.800095 | 1.69E-48 | -1.69E-46 |
| MS.gene05589 | MS.gene28381 | 0.825802 | 3.84E-54 | -1.69E-46 |
| MS.gene056046 | MS.gene28381 | 0.805824 | 1.11E-49 | -1.69E-46 |
| MS.gene056446 | MS.gene28381 | 0.810914 | 9.10E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene28381 | 0.855654 | 5.46E-62 | -1.69E-46 |
| MS.gene056510 | MS.gene28381 | 0.866095 | 3.66E-65 | -1.69E-46 |
| MS.gene056657 | MS.gene28381 | 0.842648 | 2.27E-58 | -1.69E-46 |
| MS.gene056692 | MS.gene28381 | 0.808415 | 3.13E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene28381 | 0.804365 | 2.24E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene28381 | 0.822701 | 2.06E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene28381 | 0.804706 | 1.90E-49 | -1.69E-46 |
| MS.gene057872 | MS.gene28381 | 0.801512 | 8.69E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene28381 | 0.824533 | 7.67E-54 | -1.69E-46 |
| MS.gene058130 | MS.gene28381 | 0.822619 | 2.15E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene28381 | 0.875961 | 2.04E-68 | -1.69E-46 |
| MS.gene058419 | MS.gene28381 | 0.822392 | 2.43E-53 | -1.69E-46 |
| MS.gene058544 | MS.gene28381 | 0.803356 | 3.62E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene28381 | 0.829726 | 4.38E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene28381 | 0.820012 | 8.59E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene28381 | 0.83536 | 1.76E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene28381 | 0.819663 | 1.03E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene28381 | 0.80281 | 4.70E-49 | -1.69E-46 |
| MS.gene059181 | MS.gene28381 | 0.803429 | 3.50E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene28381 | 0.806471 | 8.10E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene28381 | 0.834876 | 2.33E-56 | -1.69E-46 |
| MS.gene059756 | MS.gene28381 | 0.815847 | 7.49E-52 | -1.69E-46 |
| MS.gene059837 | MS.gene28381 | 0.841088 | 5.87E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene28381 | 0.851665 | 7.66E-61 | -1.69E-46 |
| MS.gene06000 | MS.gene28381 | 0.828336 | 9.51E-55 | -1.69E-46 |
| MS.gene060482 | MS.gene28381 | 0.812259 | 4.64E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene28381 | -0.817211 | 3.71E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene28381 | 0.819128 | 1.37E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene28381 | 0.827002 | 1.99E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene28381 | 0.830733 | 2.49E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene28381 | 0.864977 | 8.24E-65 | -1.69E-46 |
| MS.gene060835 | MS.gene28381 | 0.80499 | 1.66E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene28381 | 0.867741 | 1.09E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28381.t1 | MTR_8g093800 | 98.030 | 406 | 8 | 0 | 14 | 419 | 15 | 420 | 0.0 | 820 |
| MS.gene28381.t1 | MTR_4g109500 | 33.129 | 326 | 194 | 7 | 72 | 388 | 34 | 344 | 9.16e-49 | 176 |
| MS.gene28381.t1 | MTR_4g109500 | 33.129 | 326 | 194 | 7 | 72 | 388 | 34 | 344 | 1.10e-48 | 176 |
| MS.gene28381.t1 | MTR_4g111985 | 36.491 | 285 | 160 | 8 | 114 | 394 | 251 | 518 | 1.29e-42 | 158 |
| MS.gene28381.t1 | MTR_4g111985 | 36.491 | 285 | 160 | 8 | 114 | 394 | 290 | 557 | 2.74e-42 | 157 |
| MS.gene28381.t1 | MTR_2g087270 | 31.429 | 315 | 193 | 6 | 74 | 383 | 48 | 344 | 3.90e-42 | 153 |
| MS.gene28381.t1 | MTR_4g111985 | 35.424 | 271 | 147 | 8 | 114 | 380 | 251 | 497 | 7.59e-36 | 138 |
| MS.gene28381.t1 | MTR_3g077160 | 26.101 | 318 | 194 | 9 | 35 | 336 | 7 | 299 | 1.82e-18 | 87.8 |
| MS.gene28381.t1 | MTR_5g004640 | 25.658 | 304 | 196 | 8 | 43 | 335 | 5 | 289 | 2.38e-18 | 87.4 |
| MS.gene28381.t1 | MTR_3g118535 | 28.139 | 231 | 148 | 6 | 112 | 335 | 67 | 286 | 2.40e-18 | 87.4 |
| MS.gene28381.t1 | MTR_4g055080 | 29.032 | 155 | 106 | 2 | 197 | 349 | 111 | 263 | 1.02e-14 | 75.9 |
| MS.gene28381.t1 | MTR_4g055080 | 29.032 | 155 | 106 | 2 | 197 | 349 | 136 | 288 | 1.73e-14 | 75.1 |
| MS.gene28381.t1 | MTR_1g016440 | 24.921 | 317 | 201 | 11 | 73 | 382 | 49 | 335 | 6.30e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28381.t1 | AT4G33470 | 71.788 | 397 | 106 | 1 | 29 | 419 | 27 | 423 | 0.0 | 605 |
| MS.gene28381.t1 | AT5G61060 | 32.394 | 355 | 210 | 10 | 74 | 417 | 44 | 379 | 1.78e-48 | 175 |
| MS.gene28381.t1 | AT5G61060 | 32.113 | 355 | 215 | 9 | 74 | 417 | 44 | 383 | 2.02e-48 | 175 |
| MS.gene28381.t1 | AT5G61070 | 35.636 | 275 | 156 | 8 | 152 | 417 | 150 | 412 | 2.26e-45 | 167 |
| MS.gene28381.t1 | AT1G08460 | 29.745 | 353 | 219 | 8 | 74 | 418 | 37 | 368 | 3.30e-45 | 160 |
| MS.gene28381.t1 | AT3G18520 | 45.098 | 204 | 103 | 4 | 187 | 386 | 266 | 464 | 3.55e-45 | 164 |
| MS.gene28381.t1 | AT3G18520 | 45.320 | 203 | 102 | 4 | 187 | 385 | 266 | 463 | 3.94e-45 | 164 |
| MS.gene28381.t1 | AT3G18520 | 45.098 | 204 | 103 | 4 | 187 | 386 | 266 | 464 | 6.64e-45 | 164 |
| MS.gene28381.t1 | AT3G18520 | 44.974 | 189 | 95 | 4 | 187 | 371 | 266 | 449 | 2.69e-39 | 147 |
| MS.gene28381.t1 | AT1G08460 | 32.296 | 257 | 147 | 7 | 74 | 322 | 37 | 274 | 8.10e-35 | 132 |
| MS.gene28381.t1 | AT4G38130 | 26.207 | 290 | 178 | 9 | 60 | 335 | 18 | 285 | 9.43e-18 | 85.5 |
| MS.gene28381.t1 | AT5G63110 | 34.043 | 141 | 90 | 2 | 197 | 336 | 152 | 290 | 1.37e-17 | 85.1 |
| MS.gene28381.t1 | AT4G38130 | 26.552 | 290 | 177 | 9 | 60 | 335 | 18 | 285 | 1.72e-17 | 84.7 |
| MS.gene28381.t1 | AT3G44680 | 28.440 | 218 | 137 | 7 | 197 | 407 | 136 | 341 | 3.49e-16 | 80.5 |
| MS.gene28381.t1 | AT5G35600 | 25.514 | 243 | 155 | 7 | 105 | 335 | 52 | 280 | 3.11e-13 | 71.2 |
Find 106 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTCTTCATACAAAATATT+TGG | 0.067233 | 4.4:+9299426 | None:intergenic |
| CCACACCACAAGCACAATTT+TGG | 0.092746 | 4.4:+9304124 | None:intergenic |
| CATGCAAGAGCCTATGTTTC+TGG | 0.144607 | 4.4:-9303084 | MS.gene28381:CDS |
| ACTTGTTTACATGATGATTA+AGG | 0.248181 | 4.4:+9304070 | None:intergenic |
| GACATCATTCTTGTTTCTGC+TGG | 0.267199 | 4.4:-9299876 | MS.gene28381:CDS |
| TTATTCAGTTGCTCCATCTA+TGG | 0.271819 | 4.4:-9303944 | MS.gene28381:CDS |
| CTTCCTCTTCCTGGAGGTTC+AGG | 0.276489 | 4.4:-9299963 | MS.gene28381:CDS |
| GACACATTTCGTGCTCTTCT+TGG | 0.276981 | 4.4:-9299480 | MS.gene28381:CDS |
| ACACATTTCGTGCTCTTCTT+GGG | 0.305035 | 4.4:-9299479 | MS.gene28381:CDS |
| AATCATGGTGCAGACCTTTC+AGG | 0.312463 | 4.4:-9302202 | MS.gene28381:intron |
| CAGAAGCCCATAGGTCCTTT+TGG | 0.312668 | 4.4:+9301385 | None:intergenic |
| GGAACTCTAAAATGTGATTC+TGG | 0.327663 | 4.4:+9303812 | None:intergenic |
| ACATTAAATCTTCCTCTTCC+TGG | 0.333702 | 4.4:-9299972 | MS.gene28381:CDS |
| CTTATTGTCGTTGATGGTTC+GGG | 0.337854 | 4.4:-9302340 | MS.gene28381:CDS |
| CGTCATGCTCAGCGTGTTCA+TGG | 0.349689 | 4.4:-9301334 | MS.gene28381:CDS |
| ACTTATTGTCGTTGATGGTT+CGG | 0.352826 | 4.4:-9302341 | MS.gene28381:CDS |
| GCTCTTCATACAAAATATTT+GGG | 0.352989 | 4.4:+9299427 | None:intergenic |
| ACCTGATTGTGGCCCATAGA+TGG | 0.365380 | 4.4:+9303931 | None:intergenic |
| TCCATCTATGGGCCACAATC+AGG | 0.365718 | 4.4:-9303932 | MS.gene28381:intron |
| TGGAGGGCAGTGAGAATTGC+AGG | 0.379250 | 4.4:+9303791 | None:intergenic |
| AAAGGTGTGAAGAAATGTTT+AGG | 0.380313 | 4.4:-9304030 | MS.gene28381:CDS |
| AAATTTGATGAGGTGGGTGC+TGG | 0.381934 | 4.4:-9300011 | MS.gene28381:CDS |
| AAGGGACTTATTGTCGTTGA+TGG | 0.384109 | 4.4:-9302346 | MS.gene28381:CDS |
| CGCCATTCCAAAAGGACCTA+TGG | 0.385432 | 4.4:-9301392 | MS.gene28381:CDS |
| TGGAAGAATCAGAGAAATAA+AGG | 0.387450 | 4.4:-9304048 | MS.gene28381:CDS |
| TTGAAGTGAGCTTCATTTGT+TGG | 0.400600 | 4.4:+9303771 | None:intergenic |
| ATGCAAGAGCCTATGTTTCT+GGG | 0.402764 | 4.4:-9303083 | MS.gene28381:CDS |
| GATGAGGTGGGTGCTGGGGA+TGG | 0.407309 | 4.4:-9300005 | MS.gene28381:CDS |
| ACAGGTTATGGATCAAGCTT+TGG | 0.409172 | 4.4:-9302371 | MS.gene28381:intron |
| ACCCACCTCATCAAATTTGC+CGG | 0.409422 | 4.4:+9300016 | None:intergenic |
| GGTGTGGACCGTGGTATAAC+AGG | 0.423351 | 4.4:-9304108 | MS.gene28381:CDS |
| TCATCAAATTTGCCGGTACC+TGG | 0.425503 | 4.4:+9300023 | None:intergenic |
| GCTAATCTTCAATTAACAAC+GGG | 0.447179 | 4.4:-9299621 | MS.gene28381:CDS |
| TGATGATTAAGGATAAAGAT+TGG | 0.449045 | 4.4:+9304081 | None:intergenic |
| TTTGGAATGGCGTGATGTCC+TGG | 0.452922 | 4.4:+9301403 | None:intergenic |
| CTATGTTTCTGGGCTTGAAA+AGG | 0.464599 | 4.4:-9303073 | MS.gene28381:intron |
| ATGACTCAATTGCTGAATAG+AGG | 0.465153 | 4.4:+9303978 | None:intergenic |
| ACATCATTCTTGTTTCTGCT+GGG | 0.466289 | 4.4:-9299875 | MS.gene28381:intron |
| AATTTGATGAGGTGGGTGCT+GGG | 0.470063 | 4.4:-9300010 | MS.gene28381:CDS |
| TATTCAGTTGCTCCATCTAT+GGG | 0.475551 | 4.4:-9303943 | MS.gene28381:CDS |
| TCAATAGTAGCAGCTGGTGC+TGG | 0.476526 | 4.4:-9302177 | MS.gene28381:CDS |
| TTTGATGTTCACCACGGGAA+TGG | 0.481143 | 4.4:-9301286 | MS.gene28381:CDS |
| GCTCAGGATGGAAGCTATCC+AGG | 0.481149 | 4.4:-9300041 | MS.gene28381:intron |
| AGCTTACTTGATGGAAGGAA+AGG | 0.484055 | 4.4:+9301224 | None:intergenic |
| CACATTTCGTGCTCTTCTTG+GGG | 0.488682 | 4.4:-9299478 | MS.gene28381:CDS |
| ATTTCGTTTGTCAGGTATGA+TGG | 0.492454 | 4.4:-9299663 | MS.gene28381:intron |
| AACTAGCAAAAGACTTATGT+GGG | 0.492815 | 4.4:-9299566 | MS.gene28381:CDS |
| CAACTAGCAAAAGACTTATG+TGG | 0.495347 | 4.4:-9299567 | MS.gene28381:CDS |
| CTGAGCATGACGAGCTGCAA+TGG | 0.497183 | 4.4:+9301345 | None:intergenic |
| TCTTCTTGGGGACAAAAGCT+TGG | 0.502408 | 4.4:-9299466 | MS.gene28381:CDS |
| TACCGGCAAATTTGATGAGG+TGG | 0.518143 | 4.4:-9300018 | MS.gene28381:CDS |
| TTCAGCAATTGAGTCATGCT+CGG | 0.524641 | 4.4:-9303972 | MS.gene28381:CDS |
| GTGGGTGCTGGGGATGGTGA+AGG | 0.527108 | 4.4:-9299999 | MS.gene28381:CDS |
| GGACATCACGCCATTCCAAA+AGG | 0.528420 | 4.4:-9301400 | MS.gene28381:CDS |
| CTTATAGCTTACTTGATGGA+AGG | 0.536704 | 4.4:+9301219 | None:intergenic |
| GTTAATTGAAGATTAGCTAG+TGG | 0.538185 | 4.4:+9299627 | None:intergenic |
| GCAGTATCACCTGAACCTCC+AGG | 0.541210 | 4.4:+9299954 | None:intergenic |
| ATGGATCAAGCTTTGGAGAA+GGG | 0.542742 | 4.4:-9302364 | MS.gene28381:CDS |
| ACAAATGAAGCTCACTTCAA+AGG | 0.545527 | 4.4:-9303768 | MS.gene28381:intron |
| TCACCTGAACCTCCAGGAAG+AGG | 0.547363 | 4.4:+9299960 | None:intergenic |
| GCCATTCCAAAAGGACCTAT+GGG | 0.549537 | 4.4:-9301391 | MS.gene28381:CDS |
| TTGTGCTCAAAGATTTAAGC+CGG | 0.553693 | 4.4:-9299898 | MS.gene28381:CDS |
| CAGGAGTCAATAGTAGCAGC+TGG | 0.555060 | 4.4:-9302183 | MS.gene28381:CDS |
| TTAATCATCATGTAAACAAG+TGG | 0.557141 | 4.4:-9304068 | MS.gene28381:CDS |
| GCAGAAACAAGAATGATGTC+CGG | 0.559247 | 4.4:+9299879 | None:intergenic |
| GATGGAAGCTATCCAGGTAC+CGG | 0.560974 | 4.4:-9300035 | MS.gene28381:CDS |
| GCAATGTCATCGGTAGAAGC+AGG | 0.562346 | 4.4:+9303114 | None:intergenic |
| GATCACCACTGAGTCAACTA+AGG | 0.563005 | 4.4:+9302149 | None:intergenic |
| CAAGTCTCTTTCATATTCAG+TGG | 0.567575 | 4.4:-9299505 | MS.gene28381:CDS |
| CCAAAATTGTGCTTGTGGTG+TGG | 0.570945 | 4.4:-9304124 | MS.gene28381:CDS |
| AGCTAATCTTCAATTAACAA+CGG | 0.571327 | 4.4:-9299622 | MS.gene28381:CDS |
| GGCTTAAATCTTTGAGCACA+AGG | 0.573135 | 4.4:+9299900 | None:intergenic |
| TATGGATCAAGCTTTGGAGA+AGG | 0.575070 | 4.4:-9302365 | MS.gene28381:CDS |
| AAGTGAGCTTCATTTGTTGG+AGG | 0.580694 | 4.4:+9303774 | None:intergenic |
| ATTTGATGAGGTGGGTGCTG+GGG | 0.581878 | 4.4:-9300009 | MS.gene28381:CDS |
| AGTGAGCTTCATTTGTTGGA+GGG | 0.589485 | 4.4:+9303775 | None:intergenic |
| TCGACTTTGATGTTCACCAC+GGG | 0.590785 | 4.4:-9301291 | MS.gene28381:CDS |
| TGACTCAATTGCTGAATAGA+GGG | 0.593945 | 4.4:+9303979 | None:intergenic |
| CATCATTTGTTCCATTCCCG+TGG | 0.594263 | 4.4:+9301275 | None:intergenic |
| TTATGCATGATTCAGTTCCG+TGG | 0.595575 | 4.4:-9303168 | MS.gene28381:intron |
| TTAAATCTTCCTCTTCCTGG+AGG | 0.612077 | 4.4:-9299969 | MS.gene28381:CDS |
| TGCTACTATTGACTCCTGAA+AGG | 0.616068 | 4.4:+9302188 | None:intergenic |
| CTTATCAATGCAAAACCAGT+GGG | 0.618120 | 4.4:+9301430 | None:intergenic |
| ACCGGCAAATTTGATGAGGT+GGG | 0.619088 | 4.4:-9300017 | MS.gene28381:CDS |
| ATCAATGCAAAACCAGTGGG+TGG | 0.619217 | 4.4:+9301433 | None:intergenic |
| ATGCACACTTGCAATGTCAT+CGG | 0.619609 | 4.4:+9303104 | None:intergenic |
| ACAGTGGAAGTAGCATATGT+TGG | 0.624738 | 4.4:+9302316 | None:intergenic |
| GATTCAGTTCCGTGGCTCTG+AGG | 0.633784 | 4.4:-9303160 | MS.gene28381:intron |
| TTGGTTTCCCTGTTATACCA+CGG | 0.635903 | 4.4:+9304100 | None:intergenic |
| ATAATGAAAGATCCACCCAC+TGG | 0.638098 | 4.4:-9301445 | MS.gene28381:CDS |
| AGATTAAGCAAGCTATTCAG+AGG | 0.639466 | 4.4:-9299395 | MS.gene28381:CDS |
| ATGACCCAAAATTGTGCTTG+TGG | 0.640749 | 4.4:-9304129 | MS.gene28381:CDS |
| GTTCAATGACCTCAGAGCCA+CGG | 0.650360 | 4.4:+9303151 | None:intergenic |
| AGGAAGAGGAAGATTTAATG+TGG | 0.653031 | 4.4:+9299974 | None:intergenic |
| TCTTATCAATGCAAAACCAG+TGG | 0.657521 | 4.4:+9301429 | None:intergenic |
| TTTGCATTGATAAGACCACC+AGG | 0.661033 | 4.4:-9301421 | MS.gene28381:CDS |
| AGGTACCGGCAAATTTGATG+AGG | 0.666762 | 4.4:-9300021 | MS.gene28381:CDS |
| ATCGACTTTGATGTTCACCA+CGG | 0.667897 | 4.4:-9301292 | MS.gene28381:CDS |
| TGTGCTTGTGGTGTGGACCG+TGG | 0.692095 | 4.4:-9304117 | MS.gene28381:CDS |
| ATTAGCCTTAGTTGACTCAG+TGG | 0.692844 | 4.4:-9302154 | MS.gene28381:intron |
| GTGTGGACCGTGGTATAACA+GGG | 0.697433 | 4.4:-9304107 | MS.gene28381:CDS |
| CTAGCAAAAGACTTATGTGG+GGG | 0.704013 | 4.4:-9299564 | MS.gene28381:CDS |
| ACTAGCAAAAGACTTATGTG+GGG | 0.708262 | 4.4:-9299565 | MS.gene28381:CDS |
| GGAATGGCGTGATGTCCTGG+TGG | 0.728966 | 4.4:+9301406 | None:intergenic |
| TAGCTAGTGGATCTAACACG+TGG | 0.729738 | 4.4:+9299640 | None:intergenic |
| ATTGTGCAGAAACCTGATTG+TGG | 0.764552 | 4.4:+9303920 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATAACTTCAATTTAA+TGG | - | chr4.4:9303437-9303456 | MS.gene28381:intron | 10.0% |
| !! | TTAATAATAAATACTTTGTT+TGG | - | chr4.4:9299861-9299880 | MS.gene28381:intron | 10.0% |
| !! | AAATTGAAAGAAAAAAAACA+TGG | + | chr4.4:9302581-9302600 | None:intergenic | 15.0% |
| !! | ATTTCAATATAGTAGTAATA+AGG | + | chr4.4:9302951-9302970 | None:intergenic | 15.0% |
| !! | TAGAAAATACAATTATTCTA+TGG | - | chr4.4:9301233-9301252 | MS.gene28381:CDS | 15.0% |
| !! | TTAAAATTAACGAAAGAAAA+TGG | + | chr4.4:9300113-9300132 | None:intergenic | 15.0% |
| !! | TTTATATCTCTTAAGAAATT+TGG | + | chr4.4:9301883-9301902 | None:intergenic | 15.0% |
| !!! | ATAATCTATGTTTTATTTTG+GGG | - | chr4.4:9301403-9301422 | MS.gene28381:CDS | 15.0% |
| !!! | GATAATCTATGTTTTATTTT+GGG | - | chr4.4:9301402-9301421 | MS.gene28381:CDS | 15.0% |
| !!! | TGATAATCTATGTTTTATTT+TGG | - | chr4.4:9301401-9301420 | MS.gene28381:CDS | 15.0% |
| !! | AAAATAACTTATGTTTGAAC+TGG | + | chr4.4:9300072-9300091 | None:intergenic | 20.0% |
| !! | AAAATGAAAAAGAAATATCC+TGG | - | chr4.4:9302384-9302403 | MS.gene28381:intron | 20.0% |
| !! | AAATAACTTATGTTTGAACT+GGG | + | chr4.4:9300071-9300090 | None:intergenic | 20.0% |
| !! | AAATACAAATCAACTTCAAT+GGG | - | chr4.4:9300151-9300170 | MS.gene28381:intron | 20.0% |
| !! | AAATGAAAAAGAAATATCCT+GGG | - | chr4.4:9302385-9302404 | MS.gene28381:intron | 20.0% |
| !! | AGAATAAATTAGTCAAAACA+TGG | + | chr4.4:9300959-9300978 | None:intergenic | 20.0% |
| !! | CTTAAAAAATAAAGAGATTC+AGG | + | chr4.4:9299766-9299785 | None:intergenic | 20.0% |
| !! | GATTTGTATTTCAAACAAAT+AGG | + | chr4.4:9300142-9300161 | None:intergenic | 20.0% |
| !! | GCTAAAATACAATTTAATTC+TGG | + | chr4.4:9301803-9301822 | None:intergenic | 20.0% |
| !! | TAAATAATGTCATCAAAGTA+TGG | + | chr4.4:9300264-9300283 | None:intergenic | 20.0% |
| !! | TAAATGTTTCAAGAATTGTA+TGG | - | chr4.4:9301960-9301979 | MS.gene28381:intron | 20.0% |
| !! | TACAAAATAATAGTATAAGC+AGG | - | chr4.4:9303253-9303272 | MS.gene28381:intron | 20.0% |
| !! | TATTCTATGGAAATTCATAA+TGG | - | chr4.4:9301246-9301265 | MS.gene28381:CDS | 20.0% |
| !! | TGAATATGTAAATGAGAAAT+AGG | - | chr4.4:9302751-9302770 | MS.gene28381:intron | 20.0% |
| !! | TGATGACATTATTTAGTAAT+TGG | - | chr4.4:9300269-9300288 | MS.gene28381:intron | 20.0% |
| !!! | AAAACATAGTTGATATAGAT+TGG | + | chr4.4:9300826-9300845 | None:intergenic | 20.0% |
| !!! | AAAATTAGGTATTGAAGTTA+TGG | + | chr4.4:9299607-9299626 | None:intergenic | 20.0% |
| !!! | AATAAATACTTTGTTTGGAA+AGG | - | chr4.4:9299866-9299885 | MS.gene28381:intron | 20.0% |
| !!! | AATTTAATTCTGGAAAATAG+GGG | + | chr4.4:9301793-9301812 | None:intergenic | 20.0% |
| !!! | ACAATTTAATTCTGGAAAAT+AGG | + | chr4.4:9301795-9301814 | None:intergenic | 20.0% |
| !!! | AGGTTTTGTATTCTAAATTA+TGG | - | chr4.4:9300496-9300515 | MS.gene28381:intron | 20.0% |
| !!! | CAATTTAATTCTGGAAAATA+GGG | + | chr4.4:9301794-9301813 | None:intergenic | 20.0% |
| !!! | TATTTTCTTGTTTTCCTTAT+TGG | - | chr4.4:9302324-9302343 | MS.gene28381:CDS | 20.0% |
| !!! | TTTGATTTGATTTTTCATTC+AGG | - | chr4.4:9303759-9303778 | MS.gene28381:intron | 20.0% |
| ! | AAGAAAATGGTGATATATTC+TGG | + | chr4.4:9300100-9300119 | None:intergenic | 25.0% |
| ! | ACTTGTTTACATGATGATTA+AGG | + | chr4.4:9299433-9299452 | None:intergenic | 25.0% |
| ! | AGAATAAAATAGTTTCCGAT+AGG | + | chr4.4:9301483-9301502 | None:intergenic | 25.0% |
| ! | AGAGAAAATTAGATCATACA+AGG | + | chr4.4:9299903-9299922 | None:intergenic | 25.0% |
| ! | AGCTAATCTTCAATTAACAA+CGG | - | chr4.4:9303878-9303897 | MS.gene28381:intron | 25.0% |
| ! | AGTGTGCTAATTATGAAAAA+AGG | - | chr4.4:9303382-9303401 | MS.gene28381:intron | 25.0% |
| ! | ATTGTGATTCTAACAATAAC+AGG | - | chr4.4:9299657-9299676 | MS.gene28381:intron | 25.0% |
| ! | CAATATAGTAGTAATAAGGA+TGG | + | chr4.4:9302947-9302966 | None:intergenic | 25.0% |
| ! | CATAATTATCAAAGCAAAGA+TGG | - | chr4.4:9303665-9303684 | MS.gene28381:intron | 25.0% |
| ! | CCATTTAAAGGTAAAAAGAA+AGG | + | chr4.4:9301568-9301587 | None:intergenic | 25.0% |
| ! | CTTAAAGTTGAATCAAAGAT+CGG | + | chr4.4:9302665-9302684 | None:intergenic | 25.0% |
| ! | CTTCATATTCAATCTACTAT+CGG | - | chr4.4:9299963-9299982 | MS.gene28381:CDS | 25.0% |
| ! | GAAATACAAATCAACTTCAA+TGG | - | chr4.4:9300150-9300169 | MS.gene28381:intron | 25.0% |
| ! | GATACATCATAAGAATTACT+TGG | - | chr4.4:9300675-9300694 | MS.gene28381:intron | 25.0% |
| ! | GATTGGAGACATTAATATAT+TGG | + | chr4.4:9303147-9303166 | None:intergenic | 25.0% |
| ! | GCTCTTCATACAAAATATTT+GGG | + | chr4.4:9304076-9304095 | None:intergenic | 25.0% |
| ! | TACATATGGTCCTAATTATT+CGG | - | chr4.4:9302989-9303008 | MS.gene28381:intron | 25.0% |
| ! | TCCATATGTAAAAACAACAT+TGG | + | chr4.4:9303807-9303826 | None:intergenic | 25.0% |
| ! | TGAAGTTTGAACAAAAAAGA+AGG | + | chr4.4:9300989-9301008 | None:intergenic | 25.0% |
| ! | TGATGATTAAGGATAAAGAT+TGG | + | chr4.4:9299422-9299441 | None:intergenic | 25.0% |
| ! | TGCTCTTTCTATAAATTCTA+GGG | - | chr4.4:9300794-9300813 | MS.gene28381:intron | 25.0% |
| ! | TTAAAGTTGAATCAAAGATC+GGG | + | chr4.4:9302664-9302683 | None:intergenic | 25.0% |
| ! | TTAATCATCATGTAAACAAG+TGG | - | chr4.4:9299432-9299451 | MS.gene28381:CDS | 25.0% |
| !! | AAGCATTTTCAGTCAATATT+TGG | + | chr4.4:9301531-9301550 | None:intergenic | 25.0% |
| !! | CCTTTCTTTTTACCTTTAAA+TGG | - | chr4.4:9301565-9301584 | MS.gene28381:intron | 25.0% |
| !! | CTTTTTACCTTTAAATGGTT+GGG | - | chr4.4:9301570-9301589 | MS.gene28381:intron | 25.0% |
| !! | GAAACTATTTTATTCTCTGT+TGG | - | chr4.4:9301487-9301506 | MS.gene28381:intron | 25.0% |
| !! | TAAAAGGAAGTATGAGATAA+AGG | + | chr4.4:9300606-9300625 | None:intergenic | 25.0% |
| !! | TCTTTTTACCTTTAAATGGT+TGG | - | chr4.4:9301569-9301588 | MS.gene28381:intron | 25.0% |
| !! | TTTATTCTCTGTTGGAATTT+TGG | - | chr4.4:9301495-9301514 | MS.gene28381:intron | 25.0% |
| !! | TTTTGCTAGTTGTTTAATAC+TGG | + | chr4.4:9303925-9303944 | None:intergenic | 25.0% |
| !! | TTTTTACCTTTAAATGGTTG+GGG | - | chr4.4:9301571-9301590 | MS.gene28381:intron | 25.0% |
| !!! | AAGAGATATAAAAGTATTCC+AGG | - | chr4.4:9301891-9301910 | MS.gene28381:intron | 25.0% |
| !!! | AGAGATATAAAAGTATTCCA+GGG | - | chr4.4:9301892-9301911 | MS.gene28381:intron | 25.0% |
| !!! | GAAGTTCTGTTTTTTCAAAA+TGG | - | chr4.4:9303289-9303308 | MS.gene28381:intron | 25.0% |
| !!! | TAGCTTAAGTTTTAGAAACA+TGG | - | chr4.4:9301721-9301740 | MS.gene28381:intron | 25.0% |
| !!! | TAGTCTATTTAAGCTTTGTT+TGG | + | chr4.4:9300040-9300059 | None:intergenic | 25.0% |
| AAAAAAAACATGGATGCCAT+GGG | + | chr4.4:9302571-9302590 | None:intergenic | 30.0% | |
| AACTAGCAAAAGACTTATGT+GGG | - | chr4.4:9303934-9303953 | MS.gene28381:CDS | 30.0% | |
| AATTAAGTTTGTAACTGTGC+TGG | + | chr4.4:9303728-9303747 | None:intergenic | 30.0% | |
| ACAGTGATGATATAACATCA+AGG | - | chr4.4:9300922-9300941 | MS.gene28381:intron | 30.0% | |
| ACATATACATGTCTAATAGG+CGG | - | chr4.4:9303023-9303042 | MS.gene28381:intron | 30.0% | |
| ACATATGGTCCTAATTATTC+GGG | - | chr4.4:9302990-9303009 | MS.gene28381:intron | 30.0% | |
| AGAATTTATAGAAAGAGCAG+AGG | + | chr4.4:9300793-9300812 | None:intergenic | 30.0% | |
| AGGAAGATATTGAAGAACAA+AGG | - | chr4.4:9302771-9302790 | MS.gene28381:intron | 30.0% | |
| AGTTCAGTTCAGACAAAATT+AGG | + | chr4.4:9299621-9299640 | None:intergenic | 30.0% | |
| ATATTGAAGAACAAAGGCTT+CGG | - | chr4.4:9302777-9302796 | MS.gene28381:intron | 30.0% | |
| CAAACTTATAGCTTACTTGA+TGG | + | chr4.4:9302288-9302307 | None:intergenic | 30.0% | |
| CAAGAATTGTATGGAACTAA+TGG | - | chr4.4:9301969-9301988 | MS.gene28381:intron | 30.0% | |
| CTAAAACTTAAGCTAGAATG+TGG | + | chr4.4:9301716-9301735 | None:intergenic | 30.0% | |
| CTATTAGACATGTATATGTC+AGG | + | chr4.4:9303022-9303041 | None:intergenic | 30.0% | |
| CTGACATATACATGTCTAAT+AGG | - | chr4.4:9303020-9303039 | MS.gene28381:intron | 30.0% | |
| CTGCTCTTTCTATAAATTCT+AGG | - | chr4.4:9300793-9300812 | MS.gene28381:intron | 30.0% | |
| GATGCACTAACAAATACATA+TGG | - | chr4.4:9302975-9302994 | MS.gene28381:intron | 30.0% | |
| GCTAATCTTCAATTAACAAC+GGG | - | chr4.4:9303879-9303898 | MS.gene28381:intron | 30.0% | |
| GGCTCTTCATACAAAATATT+TGG | + | chr4.4:9304077-9304096 | None:intergenic | 30.0% | |
| TAAAGTTGAATCAAAGATCG+GGG | + | chr4.4:9302663-9302682 | None:intergenic | 30.0% | |
| TAACTTCAATTTAATGGCTC+AGG | - | chr4.4:9303443-9303462 | MS.gene28381:intron | 30.0% | |
| TATGATGTATCATGTATTGC+TGG | + | chr4.4:9300666-9300685 | None:intergenic | 30.0% | |
| TCTTATTCGATTTCACATTC+AGG | - | chr4.4:9302018-9302037 | MS.gene28381:intron | 30.0% | |
| TGAAAAAGACCAACTTAACT+GGG | - | chr4.4:9300211-9300230 | MS.gene28381:intron | 30.0% | |
| TGGAAGAATCAGAGAAATAA+AGG | - | chr4.4:9299452-9299471 | MS.gene28381:CDS | 30.0% | |
| TTGAAAAAGACCAACTTAAC+TGG | - | chr4.4:9300210-9300229 | MS.gene28381:intron | 30.0% | |
| TTGAGTAAAATTAGTGGTTG+AGG | + | chr4.4:9299941-9299960 | None:intergenic | 30.0% | |
| TTTAGACAGAATTACTCCAT+AGG | - | chr4.4:9300578-9300597 | MS.gene28381:intron | 30.0% | |
| TTTATAGTATGCTGATATGC+AGG | + | chr4.4:9303183-9303202 | None:intergenic | 30.0% | |
| ! | AAAGGTGTGAAGAAATGTTT+AGG | - | chr4.4:9299470-9299489 | MS.gene28381:CDS | 30.0% |
| ! | CAAATGATTTTACCATGACA+TGG | - | chr4.4:9301063-9301082 | MS.gene28381:intron | 30.0% |
| ! | GTTAATTGAAGATTAGCTAG+TGG | + | chr4.4:9303876-9303895 | None:intergenic | 30.0% |
| ! | TGTTCAGAAGTACACATTAT+AGG | + | chr4.4:9300851-9300870 | None:intergenic | 30.0% |
| ! | TTTTACCTTTAAATGGTTGG+GGG | - | chr4.4:9301572-9301591 | MS.gene28381:intron | 30.0% |
| !! | AATAGTTTGCTGAAAGATCT+TGG | - | chr4.4:9302720-9302739 | MS.gene28381:intron | 30.0% |
| !! | GAAGTGTTGAGTAAAATTAG+TGG | + | chr4.4:9299947-9299966 | None:intergenic | 30.0% |
| !!! | ATCTATGTTTTATTTTGGGG+AGG | - | chr4.4:9301406-9301425 | MS.gene28381:CDS | 30.0% |
| !!! | GCCAATGTTGTTTTTACATA+TGG | - | chr4.4:9303803-9303822 | MS.gene28381:CDS | 30.0% |
| !!! | GCTTGCTTAATCTTTTTTGT+TGG | + | chr4.4:9304098-9304117 | None:intergenic | 30.0% |
| !!! | TCTATGTTTTATTTTGGGGA+GGG | - | chr4.4:9301407-9301426 | MS.gene28381:CDS | 30.0% |
| !!! | TGCTATTTCATTTTTGCGAA+TGG | + | chr4.4:9302362-9302381 | None:intergenic | 30.0% |
| AAAGTTGAATCAAAGATCGG+GGG | + | chr4.4:9302662-9302681 | None:intergenic | 35.0% | |
| AACTTCACATCACTAACTGT+TGG | - | chr4.4:9301002-9301021 | MS.gene28381:intron | 35.0% | |
| AAGAATTGGACAGAAAAGTG+GGG | + | chr4.4:9300631-9300650 | None:intergenic | 35.0% | |
| AAGGAAAGGAAAAATACGTC+TGG | + | chr4.4:9302265-9302284 | None:intergenic | 35.0% | |
| AATGGGCAATCTGTGATTAT+AGG | - | chr4.4:9300168-9300187 | MS.gene28381:intron | 35.0% | |
| ACAAATGAAGCTCACTTCAA+AGG | - | chr4.4:9299732-9299751 | MS.gene28381:intron | 35.0% | |
| ACATTAAATCTTCCTCTTCC+TGG | - | chr4.4:9303528-9303547 | MS.gene28381:intron | 35.0% | |
| ACTAGCAAAAGACTTATGTG+GGG | - | chr4.4:9303935-9303954 | MS.gene28381:CDS | 35.0% | |
| AGAAAAGTGAGGATATAGAG+GGG | + | chr4.4:9302479-9302498 | None:intergenic | 35.0% | |
| AGAACAAGAATTCCATGTCA+TGG | + | chr4.4:9301078-9301097 | None:intergenic | 35.0% | |
| AGATTAAGCAAGCTATTCAG+AGG | - | chr4.4:9304105-9304124 | MS.gene28381:CDS | 35.0% | |
| AGGAAGAGGAAGATTTAATG+TGG | + | chr4.4:9303529-9303548 | None:intergenic | 35.0% | |
| ATCAACCATACCAAAAGCTT+AGG | + | chr4.4:9301932-9301951 | None:intergenic | 35.0% | |
| ATGACTCAATTGCTGAATAG+AGG | + | chr4.4:9299525-9299544 | None:intergenic | 35.0% | |
| ATTTCGTTTGTCAGGTATGA+TGG | - | chr4.4:9303837-9303856 | MS.gene28381:intron | 35.0% | |
| CAACTAGCAAAAGACTTATG+TGG | - | chr4.4:9303933-9303952 | MS.gene28381:CDS | 35.0% | |
| CAAGAATTGGACAGAAAAGT+GGG | + | chr4.4:9300632-9300651 | None:intergenic | 35.0% | |
| CAAGTCTCTTTCATATTCAG+TGG | - | chr4.4:9303995-9304014 | MS.gene28381:CDS | 35.0% | |
| CATAGATTATCACCAAGAGA+TGG | + | chr4.4:9301393-9301412 | None:intergenic | 35.0% | |
| CATATGAAATAGCTGAAGGA+AGG | + | chr4.4:9300472-9300491 | None:intergenic | 35.0% | |
| CTAGATTCTCTAATTCCTAG+CGG | + | chr4.4:9302875-9302894 | None:intergenic | 35.0% | |
| CTCACATATGAAATAGCTGA+AGG | + | chr4.4:9300476-9300495 | None:intergenic | 35.0% | |
| CTTATAGCTTACTTGATGGA+AGG | + | chr4.4:9302284-9302303 | None:intergenic | 35.0% | |
| CTTATCAATGCAAAACCAGT+GGG | + | chr4.4:9302073-9302092 | None:intergenic | 35.0% | |
| GAAAAAAAACATGGATGCCA+TGG | + | chr4.4:9302572-9302591 | None:intergenic | 35.0% | |
| GAGAAAAGTGAGGATATAGA+GGG | + | chr4.4:9302480-9302499 | None:intergenic | 35.0% | |
| GGCTATTACAAACACCAATA+AGG | + | chr4.4:9302341-9302360 | None:intergenic | 35.0% | |
| GTATGAGATAAAGGAACCTA+TGG | + | chr4.4:9300597-9300616 | None:intergenic | 35.0% | |
| TAAAAATAGCAGTGACAGAG+AGG | - | chr4.4:9300708-9300727 | MS.gene28381:intron | 35.0% | |
| TAATAGTATAAGCAGGCACA+TGG | - | chr4.4:9303260-9303279 | MS.gene28381:intron | 35.0% | |
| TACCAAAAGCTTAGGCTATT+AGG | + | chr4.4:9301924-9301943 | None:intergenic | 35.0% | |
| TATTCAGTTGCTCCATCTAT+GGG | - | chr4.4:9299557-9299576 | MS.gene28381:CDS | 35.0% | |
| TCAAGAATTGGACAGAAAAG+TGG | + | chr4.4:9300633-9300652 | None:intergenic | 35.0% | |
| TCTTATAGTGATGTGCCTAT+CGG | - | chr4.4:9301465-9301484 | MS.gene28381:intron | 35.0% | |
| TCTTATCAATGCAAAACCAG+TGG | + | chr4.4:9302074-9302093 | None:intergenic | 35.0% | |
| TGACTCAATTGCTGAATAGA+GGG | + | chr4.4:9299524-9299543 | None:intergenic | 35.0% | |
| TTATTCAGTTGCTCCATCTA+TGG | - | chr4.4:9299556-9299575 | MS.gene28381:CDS | 35.0% | |
| TTCAATTTAATGGCTCAGGA+TGG | - | chr4.4:9303447-9303466 | MS.gene28381:intron | 35.0% | |
| TTCATGTGATTTCGTTTGTC+AGG | - | chr4.4:9303829-9303848 | MS.gene28381:intron | 35.0% | |
| TTGAAGTGAGCTTCATTTGT+TGG | + | chr4.4:9299732-9299751 | None:intergenic | 35.0% | |
| TTGTGCTCAAAGATTTAAGC+CGG | - | chr4.4:9303602-9303621 | MS.gene28381:intron | 35.0% | |
| ! | AATAGCCTAAGCTTTTGGTA+TGG | - | chr4.4:9301924-9301943 | MS.gene28381:intron | 35.0% |
| ! | ACATTTTTGCGTGCTTATTG+TGG | - | chr4.4:9301274-9301293 | MS.gene28381:CDS | 35.0% |
| ! | CGATGTGTATTTTTCTTGGA+AGG | - | chr4.4:9303960-9303979 | MS.gene28381:CDS | 35.0% |
| ! | GGAAGTACAACATCAAGAAT+TGG | + | chr4.4:9300645-9300664 | None:intergenic | 35.0% |
| ! | TCAGCTATTTCATATGTGAG+AGG | - | chr4.4:9300476-9300495 | MS.gene28381:intron | 35.0% |
| ! | TGCATGAATGTTTTCCTGTA+GGG | + | chr4.4:9303066-9303085 | None:intergenic | 35.0% |
| ! | TGTGTATTTTTCTTGGAAGG+AGG | - | chr4.4:9303963-9303982 | MS.gene28381:CDS | 35.0% |
| ! | TTTTCAAAATGGTCCCTTGA+GGG | - | chr4.4:9303300-9303319 | MS.gene28381:intron | 35.0% |
| !! | ACATCATTCTTGTTTCTGCT+GGG | - | chr4.4:9303625-9303644 | MS.gene28381:intron | 35.0% |
| !! | ACTTATTGTCGTTGATGGTT+CGG | - | chr4.4:9301159-9301178 | MS.gene28381:intron | 35.0% |
| !! | AGAGAAATGCTTTGAGTTGA+GGG | + | chr4.4:9302444-9302463 | None:intergenic | 35.0% |
| !! | CTTCTGCATTTTTGGAAATG+TGG | - | chr4.4:9302132-9302151 | MS.gene28381:intron | 35.0% |
| !! | GGAACTCTAAAATGTGATTC+TGG | + | chr4.4:9299691-9299710 | None:intergenic | 35.0% |
| !! | GGCATAGGTTTTGATACTTA+TGG | - | chr4.4:9301023-9301042 | MS.gene28381:intron | 35.0% |
| !! | GGTTGGTTAATTTGTTCAGT+TGG | + | chr4.4:9302854-9302873 | None:intergenic | 35.0% |
| !! | TTTGTTCATGTGGTTTGGTT+GGG | + | chr4.4:9302903-9302922 | None:intergenic | 35.0% |
| !! | TTTTTCAAAATGGTCCCTTG+AGG | - | chr4.4:9303299-9303318 | MS.gene28381:intron | 35.0% |
| !!! | AGTTGGTCTTTTTCAAAGAC+TGG | + | chr4.4:9300206-9300225 | None:intergenic | 35.0% |
| !!! | CTATGTTTTATTTTGGGGAG+GGG | - | chr4.4:9301408-9301427 | MS.gene28381:CDS | 35.0% |
| !!! | CTGGTGATTCCTTGTTTTTT+CGG | - | chr4.4:9300747-9300766 | MS.gene28381:intron | 35.0% |
| !!! | TGTATTTTAGCACAAGCTGA+AGG | - | chr4.4:9301812-9301831 | MS.gene28381:intron | 35.0% |
| AAAAGTGAGGATATAGAGGG+GGG | + | chr4.4:9302477-9302496 | None:intergenic | 40.0% | |
| AAGGGACTTATTGTCGTTGA+TGG | - | chr4.4:9301154-9301173 | MS.gene28381:intron | 40.0% | |
| AAGTTGAATCAAAGATCGGG+GGG | + | chr4.4:9302661-9302680 | None:intergenic | 40.0% | |
| ACACATTTCGTGCTCTTCTT+GGG | - | chr4.4:9304021-9304040 | MS.gene28381:CDS | 40.0% | |
| ACAGAAAAGTGGGGCATAAA+AGG | + | chr4.4:9300622-9300641 | None:intergenic | 40.0% | |
| ACAGGTTATGGATCAAGCTT+TGG | - | chr4.4:9301129-9301148 | MS.gene28381:intron | 40.0% | |
| ACAGTGGAAGTAGCATATGT+TGG | + | chr4.4:9301187-9301206 | None:intergenic | 40.0% | |
| ACATCACTAACTGTTGGCAT+AGG | - | chr4.4:9301008-9301027 | MS.gene28381:intron | 40.0% | |
| AGCTTACTTGATGGAAGGAA+AGG | + | chr4.4:9302279-9302298 | None:intergenic | 40.0% | |
| ATAATGAAAGATCCACCCAC+TGG | - | chr4.4:9302055-9302074 | MS.gene28381:intron | 40.0% | |
| ATATCCTGGGATCTATTGAG+AGG | - | chr4.4:9302398-9302417 | MS.gene28381:intron | 40.0% | |
| ATGACCCAAAATTGTGCTTG+TGG | - | chr4.4:9299371-9299390 | MS.gene28381:CDS | 40.0% | |
| ATGCAAGAGCCTATGTTTCT+GGG | - | chr4.4:9300417-9300436 | MS.gene28381:intron | 40.0% | |
| ATGCACACTTGCAATGTCAT+CGG | + | chr4.4:9300399-9300418 | None:intergenic | 40.0% | |
| ATTCTCTAATTCCTAGCGGT+TGG | + | chr4.4:9302871-9302890 | None:intergenic | 40.0% | |
| ATTGTGCAGAAACCTGATTG+TGG | + | chr4.4:9299583-9299602 | None:intergenic | 40.0% | |
| CAAAAGCTTAGGCTATTAGG+TGG | + | chr4.4:9301921-9301940 | None:intergenic | 40.0% | |
| CAGGAAAACATTCATGCAGT+CGG | - | chr4.4:9303068-9303087 | MS.gene28381:intron | 40.0% | |
| CGAAAAAACAAGGAATCACC+AGG | + | chr4.4:9300749-9300768 | None:intergenic | 40.0% | |
| CGTGCTTATTGTGGTAATCA+TGG | - | chr4.4:9301283-9301302 | MS.gene28381:CDS | 40.0% | |
| CTAGCAAAAGACTTATGTGG+GGG | - | chr4.4:9303936-9303955 | MS.gene28381:CDS | 40.0% | |
| CTTCGGTTGTAAATTCAGCA+AGG | - | chr4.4:9302794-9302813 | MS.gene28381:intron | 40.0% | |
| GAAAAGTGAGGATATAGAGG+GGG | + | chr4.4:9302478-9302497 | None:intergenic | 40.0% | |
| GAACAAATTAACCAACCGCT+AGG | - | chr4.4:9302857-9302876 | MS.gene28381:intron | 40.0% | |
| GATAGTCGATGAGCTTATAG+CGG | + | chr4.4:9300005-9300024 | None:intergenic | 40.0% | |
| GATGATATAACATCAAGGCG+AGG | - | chr4.4:9300927-9300946 | MS.gene28381:intron | 40.0% | |
| GATGGCAGATGTAAGTCATT+GGG | + | chr4.4:9302929-9302948 | None:intergenic | 40.0% | |
| GCAGAAACAAGAATGATGTC+CGG | + | chr4.4:9303624-9303643 | None:intergenic | 40.0% | |
| GCTTGATCCATAACCTGTAA+AGG | + | chr4.4:9301127-9301146 | None:intergenic | 40.0% | |
| GGAGAAAAGTGAGGATATAG+AGG | + | chr4.4:9302481-9302500 | None:intergenic | 40.0% | |
| GGCTTAAATCTTTGAGCACA+AGG | + | chr4.4:9303603-9303622 | None:intergenic | 40.0% | |
| GGTTGTTTGTTCATGTGGTT+TGG | + | chr4.4:9302908-9302927 | None:intergenic | 40.0% | |
| GTAGGGAGGCTAATATTAGA+AGG | + | chr4.4:9303049-9303068 | None:intergenic | 40.0% | |
| TAAGTGCCTCTATAAGCAAG+TGG | - | chr4.4:9301746-9301765 | MS.gene28381:intron | 40.0% | |
| TACCACAATAAGCTTGAGCA+TGG | + | chr4.4:9301215-9301234 | None:intergenic | 40.0% | |
| TACCATGCTCAAGCTTATTG+TGG | - | chr4.4:9301210-9301229 | MS.gene28381:intron | 40.0% | |
| TATGCTGATATGCAGGAGTT+TGG | + | chr4.4:9303176-9303195 | None:intergenic | 40.0% | |
| TCCACCAACTCAGAATACAT+AGG | + | chr4.4:9301664-9301683 | None:intergenic | 40.0% | |
| TCCATAACCTGTAAAGGTTC+AGG | + | chr4.4:9301121-9301140 | None:intergenic | 40.0% | |
| TCCTGAACCTTTACAGGTTA+TGG | - | chr4.4:9301117-9301136 | MS.gene28381:intron | 40.0% | |
| TCTTGACCACTTGCTTATAG+AGG | + | chr4.4:9301755-9301774 | None:intergenic | 40.0% | |
| TGTCTAGTCTCAATCCCAAA+CGG | - | chr4.4:9301845-9301864 | MS.gene28381:intron | 40.0% | |
| TTAAATCTTCCTCTTCCTGG+AGG | - | chr4.4:9303531-9303550 | MS.gene28381:intron | 40.0% | |
| TTATGCATGATTCAGTTCCG+TGG | - | chr4.4:9300332-9300351 | MS.gene28381:intron | 40.0% | |
| TTCAGCAATTGAGTCATGCT+CGG | - | chr4.4:9299528-9299547 | MS.gene28381:CDS | 40.0% | |
| TTGGTTTCCCTGTTATACCA+CGG | + | chr4.4:9299403-9299422 | None:intergenic | 40.0% | |
| TTTCAAAATGGTCCCTTGAG+GGG | - | chr4.4:9303301-9303320 | MS.gene28381:intron | 40.0% | |
| ! | AAGTGAGCTTCATTTGTTGG+AGG | + | chr4.4:9299729-9299748 | None:intergenic | 40.0% |
| ! | AGTGAGCTTCATTTGTTGGA+GGG | + | chr4.4:9299728-9299747 | None:intergenic | 40.0% |
| ! | ATCGACTTTGATGTTCACCA+CGG | - | chr4.4:9302208-9302227 | MS.gene28381:intron | 40.0% |
| ! | ATGAATGTTTTCCTGTAGGG+AGG | + | chr4.4:9303063-9303082 | None:intergenic | 40.0% |
| ! | CACACCACAAGCACAATTTT+GGG | + | chr4.4:9299378-9299397 | None:intergenic | 40.0% |
| ! | CACCTAATAGCCTAAGCTTT+TGG | - | chr4.4:9301919-9301938 | MS.gene28381:intron | 40.0% |
| ! | CATTGGGTTGTTTGTTCATG+TGG | + | chr4.4:9302913-9302932 | None:intergenic | 40.0% |
| ! | CTGCATGAATGTTTTCCTGT+AGG | + | chr4.4:9303067-9303086 | None:intergenic | 40.0% |
| ! | GCAAGCTCAGCATTTTGTTA+AGG | - | chr4.4:9302531-9302550 | MS.gene28381:intron | 40.0% |
| ! | GGGACGATGTGTATTTTTCT+TGG | - | chr4.4:9303956-9303975 | MS.gene28381:CDS | 40.0% |
| ! | TCCTATGTATTCTGAGTTGG+TGG | - | chr4.4:9301660-9301679 | MS.gene28381:intron | 40.0% |
| ! | TCTAATATTAGCCTCCCTAC+AGG | - | chr4.4:9303049-9303068 | MS.gene28381:intron | 40.0% |
| ! | TTTGCATTGATAAGACCACC+AGG | - | chr4.4:9302079-9302098 | MS.gene28381:intron | 40.0% |
| !! | ATGGATCAAGCTTTGGAGAA+GGG | - | chr4.4:9301136-9301155 | MS.gene28381:intron | 40.0% |
| !! | ATTAGCCTTAGTTGACTCAG+TGG | - | chr4.4:9301346-9301365 | MS.gene28381:CDS | 40.0% |
| !! | CTATGTTTCTGGGCTTGAAA+AGG | - | chr4.4:9300427-9300446 | MS.gene28381:intron | 40.0% |
| !! | CTTATTGTCGTTGATGGTTC+GGG | - | chr4.4:9301160-9301179 | MS.gene28381:intron | 40.0% |
| !! | CTTTTCAAGCCCAGAAACAT+AGG | + | chr4.4:9300429-9300448 | None:intergenic | 40.0% |
| !! | GACATCATTCTTGTTTCTGC+TGG | - | chr4.4:9303624-9303643 | MS.gene28381:intron | 40.0% |
| !! | GAGAGAAATGCTTTGAGTTG+AGG | + | chr4.4:9302445-9302464 | None:intergenic | 40.0% |
| !! | GTTTGTTCATGTGGTTTGGT+TGG | + | chr4.4:9302904-9302923 | None:intergenic | 40.0% |
| !! | TATGGATCAAGCTTTGGAGA+AGG | - | chr4.4:9301135-9301154 | MS.gene28381:intron | 40.0% |
| !! | TGCTACTATTGACTCCTGAA+AGG | + | chr4.4:9301315-9301334 | None:intergenic | 40.0% |
| !!! | CTTGTTTTTTCGGCTGCTAT+GGG | - | chr4.4:9300757-9300776 | MS.gene28381:intron | 40.0% |
| AAACATGGATGCCATGGGTT+TGG | + | chr4.4:9302566-9302585 | None:intergenic | 45.0% | |
| AAATTTGATGAGGTGGGTGC+TGG | - | chr4.4:9303489-9303508 | MS.gene28381:intron | 45.0% | |
| AACCTGTAAAGGTTCAGGAG+AGG | + | chr4.4:9301116-9301135 | None:intergenic | 45.0% | |
| AAGCTTAGGCTATTAGGTGG+AGG | + | chr4.4:9301918-9301937 | None:intergenic | 45.0% | |
| AATCATGGTGCAGACCTTTC+AGG | - | chr4.4:9301298-9301317 | MS.gene28381:CDS | 45.0% | |
| AATTTGATGAGGTGGGTGCT+GGG | - | chr4.4:9303490-9303509 | MS.gene28381:intron | 45.0% | |
| ACCCACCTCATCAAATTTGC+CGG | + | chr4.4:9303487-9303506 | None:intergenic | 45.0% | |
| ACCGGCAAATTTGATGAGGT+GGG | - | chr4.4:9303483-9303502 | MS.gene28381:intron | 45.0% | |
| AGGACGCTTACGAAGCAAAA+TGG | + | chr4.4:9301644-9301663 | None:intergenic | 45.0% | |
| AGGCACATGCCCGAATAATT+AGG | + | chr4.4:9303002-9303021 | None:intergenic | 45.0% | |
| AGTTGAATCAAAGATCGGGG+GGG | + | chr4.4:9302660-9302679 | None:intergenic | 45.0% | |
| ATAAGCAGGCACATGGCATT+TGG | - | chr4.4:9303267-9303286 | MS.gene28381:intron | 45.0% | |
| ATATAGAGGGGGGAAGAATG+GGG | + | chr4.4:9302467-9302486 | None:intergenic | 45.0% | |
| ATCAATGCAAAACCAGTGGG+TGG | + | chr4.4:9302070-9302089 | None:intergenic | 45.0% | |
| ATGTGCAAGTGCAAACAGAG+TGG | + | chr4.4:9303226-9303245 | None:intergenic | 45.0% | |
| CACATAGAGCCCAGTTAAGT+TGG | + | chr4.4:9300223-9300242 | None:intergenic | 45.0% | |
| CACATTTCGTGCTCTTCTTG+GGG | - | chr4.4:9304022-9304041 | MS.gene28381:CDS | 45.0% | |
| CAGAAGTTAGTGGGAGAGAA+GGG | + | chr4.4:9302512-9302531 | None:intergenic | 45.0% | |
| CATCATTTGTTCCATTCCCG+TGG | + | chr4.4:9302228-9302247 | None:intergenic | 45.0% | |
| CATGCAAGAGCCTATGTTTC+TGG | - | chr4.4:9300416-9300435 | MS.gene28381:intron | 45.0% | |
| CCAAAAATGCAGAAGCCCAT+AGG | + | chr4.4:9302127-9302146 | None:intergenic | 45.0% | |
| CCAAAATTGTGCTTGTGGTG+TGG | - | chr4.4:9299376-9299395 | MS.gene28381:CDS | 45.0% | |
| CCATAGCAGCCGAAAAAACA+AGG | + | chr4.4:9300759-9300778 | None:intergenic | 45.0% | |
| CTGAGCTTGCAGAAGTTAGT+GGG | + | chr4.4:9302521-9302540 | None:intergenic | 45.0% | |
| CTTGAGCATGGTACTTACAG+TGG | + | chr4.4:9301203-9301222 | None:intergenic | 45.0% | |
| GACACATTTCGTGCTCTTCT+TGG | - | chr4.4:9304020-9304039 | MS.gene28381:CDS | 45.0% | |
| GACGCTTACGAAGCAAAATG+GGG | + | chr4.4:9301642-9301661 | None:intergenic | 45.0% | |
| GATATAGAGGGGGGAAGAAT+GGG | + | chr4.4:9302468-9302487 | None:intergenic | 45.0% | |
| GATCACCACTGAGTCAACTA+AGG | + | chr4.4:9301354-9301373 | None:intergenic | 45.0% | |
| GCCATTCCAAAAGGACCTAT+GGG | - | chr4.4:9302109-9302128 | MS.gene28381:intron | 45.0% | |
| GCGTCCTATGTATTCTGAGT+TGG | - | chr4.4:9301657-9301676 | MS.gene28381:intron | 45.0% | |
| GGACGCTTACGAAGCAAAAT+GGG | + | chr4.4:9301643-9301662 | None:intergenic | 45.0% | |
| GGATCACACAAAAGCCGTTT+GGG | + | chr4.4:9301862-9301881 | None:intergenic | 45.0% | |
| GGATGGCAGATGTAAGTCAT+TGG | + | chr4.4:9302930-9302949 | None:intergenic | 45.0% | |
| TACCGGCAAATTTGATGAGG+TGG | - | chr4.4:9303482-9303501 | MS.gene28381:intron | 45.0% | |
| TCACCAGGTATTTGAGAGTC+TGG | + | chr4.4:9300734-9300753 | None:intergenic | 45.0% | |
| TCATCAAATTTGCCGGTACC+TGG | + | chr4.4:9303480-9303499 | None:intergenic | 45.0% | |
| TCGACTTTGATGTTCACCAC+GGG | - | chr4.4:9302209-9302228 | MS.gene28381:intron | 45.0% | |
| TCTTCTTGGGGACAAAAGCT+TGG | - | chr4.4:9304034-9304053 | MS.gene28381:CDS | 45.0% | |
| TGGATCACACAAAAGCCGTT+TGG | + | chr4.4:9301863-9301882 | None:intergenic | 45.0% | |
| TTCAAAATGGTCCCTTGAGG+GGG | - | chr4.4:9303302-9303321 | MS.gene28381:intron | 45.0% | |
| TTCCTCTCCTGAACCTTTAC+AGG | - | chr4.4:9301111-9301130 | MS.gene28381:intron | 45.0% | |
| TTTAAATGGTTGGGGGCAGT+GGG | - | chr4.4:9301579-9301598 | MS.gene28381:intron | 45.0% | |
| TTTGATGTTCACCACGGGAA+TGG | - | chr4.4:9302214-9302233 | MS.gene28381:intron | 45.0% | |
| ! | CCACACCACAAGCACAATTT+TGG | + | chr4.4:9299379-9299398 | None:intergenic | 45.0% |
| ! | CCTATGGGCTTCTGCATTTT+TGG | - | chr4.4:9302124-9302143 | MS.gene28381:intron | 45.0% |
| ! | TAGCTAGTGGATCTAACACG+TGG | + | chr4.4:9303863-9303882 | None:intergenic | 45.0% |
| !! | AGGTACCGGCAAATTTGATG+AGG | - | chr4.4:9303479-9303498 | MS.gene28381:intron | 45.0% |
| !! | ATATGCAGGAGTTTGGTGCA+AGG | + | chr4.4:9303169-9303188 | None:intergenic | 45.0% |
| !!! | CCTTGTTTTTTCGGCTGCTA+TGG | - | chr4.4:9300756-9300775 | MS.gene28381:intron | 45.0% |
| AACCTGGCATGTCCATCTCT+TGG | - | chr4.4:9301378-9301397 | MS.gene28381:CDS | 50.0% | |
| AAGTGCAAACAGAGTGGAGG+GGG | + | chr4.4:9303220-9303239 | None:intergenic | 50.0% | |
| ACCTGATTGTGGCCCATAGA+TGG | + | chr4.4:9299572-9299591 | None:intergenic | 50.0% | |
| AGGCCAGACTCTCAAATACC+TGG | - | chr4.4:9300728-9300747 | MS.gene28381:intron | 50.0% | |
| CAAGTGCAAACAGAGTGGAG+GGG | + | chr4.4:9303221-9303240 | None:intergenic | 50.0% | |
| CACTGCCCCCAACCATTTAA+AGG | + | chr4.4:9301580-9301599 | None:intergenic | 50.0% | |
| CAGACCTCTCAATAGATCCC+AGG | + | chr4.4:9302405-9302424 | None:intergenic | 50.0% | |
| CAGGAGTCAATAGTAGCAGC+TGG | - | chr4.4:9301317-9301336 | MS.gene28381:CDS | 50.0% | |
| CGCCATTCCAAAAGGACCTA+TGG | - | chr4.4:9302108-9302127 | MS.gene28381:intron | 50.0% | |
| CTTTAAATGGTTGGGGGCAG+TGG | - | chr4.4:9301578-9301597 | MS.gene28381:intron | 50.0% | |
| GAGGGGTAAGTGAGTGGATA+TGG | - | chr4.4:9301425-9301444 | MS.gene28381:CDS | 50.0% | |
| GAGTTCTGCGGAGAAAAGTG+AGG | + | chr4.4:9302490-9302509 | None:intergenic | 50.0% | |
| GATGGAAGCTATCCAGGTAC+CGG | - | chr4.4:9303465-9303484 | MS.gene28381:intron | 50.0% | |
| GCAAGTGCAAACAGAGTGGA+GGG | + | chr4.4:9303222-9303241 | None:intergenic | 50.0% | |
| GCAATGTCATCGGTAGAAGC+AGG | + | chr4.4:9300389-9300408 | None:intergenic | 50.0% | |
| GCAGAAGTTAGTGGGAGAGA+AGG | + | chr4.4:9302513-9302532 | None:intergenic | 50.0% | |
| GCTGAGCTTGCAGAAGTTAG+TGG | + | chr4.4:9302522-9302541 | None:intergenic | 50.0% | |
| GGACATCACGCCATTCCAAA+AGG | - | chr4.4:9302100-9302119 | MS.gene28381:intron | 50.0% | |
| GGATATAGAGGGGGGAAGAA+TGG | + | chr4.4:9302469-9302488 | None:intergenic | 50.0% | |
| GGCTCAAACATCCAAACCCA+TGG | - | chr4.4:9302552-9302571 | MS.gene28381:intron | 50.0% | |
| GTGTGGACCGTGGTATAACA+GGG | - | chr4.4:9299393-9299412 | MS.gene28381:CDS | 50.0% | |
| GTTCAATGACCTCAGAGCCA+CGG | + | chr4.4:9300352-9300371 | None:intergenic | 50.0% | |
| TCAATAGTAGCAGCTGGTGC+TGG | - | chr4.4:9301323-9301342 | MS.gene28381:CDS | 50.0% | |
| TCAGTGGTGATCTCTCAACC+TGG | - | chr4.4:9301362-9301381 | MS.gene28381:CDS | 50.0% | |
| TCCATCTATGGGCCACAATC+AGG | - | chr4.4:9299568-9299587 | MS.gene28381:CDS | 50.0% | |
| TCTGGAAAATAGGGGCAGCA+AGG | + | chr4.4:9301785-9301804 | None:intergenic | 50.0% | |
| TGCAAGTGCAAACAGAGTGG+AGG | + | chr4.4:9303223-9303242 | None:intergenic | 50.0% | |
| TTAAATGGTTGGGGGCAGTG+GGG | - | chr4.4:9301580-9301599 | MS.gene28381:intron | 50.0% | |
| ! | ATTTGATGAGGTGGGTGCTG+GGG | - | chr4.4:9303491-9303510 | MS.gene28381:intron | 50.0% |
| ! | CAGAAGCCCATAGGTCCTTT+TGG | + | chr4.4:9302118-9302137 | None:intergenic | 50.0% |
| ! | TTTGGAATGGCGTGATGTCC+TGG | + | chr4.4:9302100-9302119 | None:intergenic | 50.0% |
| !! | CAGGAGTTTGGTGCAAGGAT+TGG | + | chr4.4:9303164-9303183 | None:intergenic | 50.0% |
| !! | GCCCATAGGTCCTTTTGGAA+TGG | + | chr4.4:9302113-9302132 | None:intergenic | 50.0% |
| !! | TCATGTGGTTTGGTTGGGAG+AGG | + | chr4.4:9302898-9302917 | None:intergenic | 50.0% |
| AAAATGGTCCCTTGAGGGGG+AGG | - | chr4.4:9303305-9303324 | MS.gene28381:intron | 55.0% | |
| AAATGGTCCCTTGAGGGGGA+GGG | - | chr4.4:9303306-9303325 | MS.gene28381:intron | 55.0% | |
| CACCAAGAGATGGACATGCC+AGG | + | chr4.4:9301383-9301402 | None:intergenic | 55.0% | |
| CGTCATGCTCAGCGTGTTCA+TGG | - | chr4.4:9302166-9302185 | MS.gene28381:CDS | 55.0% | |
| CTGAGCATGACGAGCTGCAA+TGG | + | chr4.4:9302158-9302177 | None:intergenic | 55.0% | |
| CTTCCTCTTCCTGGAGGTTC+AGG | - | chr4.4:9303537-9303556 | MS.gene28381:intron | 55.0% | |
| GCAGTATCACCTGAACCTCC+AGG | + | chr4.4:9303549-9303568 | None:intergenic | 55.0% | |
| GCTCAGGATGGAAGCTATCC+AGG | - | chr4.4:9303459-9303478 | MS.gene28381:intron | 55.0% | |
| GGTGTGGACCGTGGTATAAC+AGG | - | chr4.4:9299392-9299411 | MS.gene28381:CDS | 55.0% | |
| TAAATGGTTGGGGGCAGTGG+GGG | - | chr4.4:9301581-9301600 | MS.gene28381:intron | 55.0% | |
| TCACCTGAACCTCCAGGAAG+AGG | + | chr4.4:9303543-9303562 | None:intergenic | 55.0% | |
| TGGAGGGCAGTGAGAATTGC+AGG | + | chr4.4:9299712-9299731 | None:intergenic | 55.0% | |
| TGGGAGAGAAGGGAGTTCTG+CGG | + | chr4.4:9302502-9302521 | None:intergenic | 55.0% | |
| TTTGGGGAGGGGTAAGTGAG+TGG | - | chr4.4:9301419-9301438 | MS.gene28381:CDS | 55.0% | |
| ! | GATTCAGTTCCGTGGCTCTG+AGG | - | chr4.4:9300340-9300359 | MS.gene28381:intron | 55.0% |
| AATGGTCCCTTGAGGGGGAG+GGG | - | chr4.4:9303307-9303326 | MS.gene28381:intron | 60.0% | |
| AGGCTATTAGGTGGAGGCCC+TGG | + | chr4.4:9301912-9301931 | None:intergenic | 60.0% | |
| GGAATGGCGTGATGTCCTGG+TGG | + | chr4.4:9302097-9302116 | None:intergenic | 60.0% | |
| TGTGCTTGTGGTGTGGACCG+TGG | - | chr4.4:9299383-9299402 | MS.gene28381:CDS | 60.0% | |
| ! | AGGGGGCTTGGTAATTGGGC+GGG | - | chr4.4:9303325-9303344 | MS.gene28381:intron | 60.0% |
| ! | GAGGGGGCTTGGTAATTGGG+CGG | - | chr4.4:9303324-9303343 | MS.gene28381:intron | 60.0% |
| ! | GCTTGGTAATTGGGCGGGGA+AGG | - | chr4.4:9303330-9303349 | MS.gene28381:intron | 60.0% |
| ! | GGGGAGGGGGCTTGGTAATT+GGG | - | chr4.4:9303321-9303340 | MS.gene28381:intron | 60.0% |
| ATGGTCCCTTGAGGGGGAGG+GGG | - | chr4.4:9303308-9303327 | MS.gene28381:intron | 65.0% | |
| ! | GGGGGAGGGGGCTTGGTAAT+TGG | - | chr4.4:9303320-9303339 | MS.gene28381:intron | 65.0% |
| ! | GGGGGCTTGGTAATTGGGCG+GGG | - | chr4.4:9303326-9303345 | MS.gene28381:intron | 65.0% |
| !! | GATGAGGTGGGTGCTGGGGA+TGG | - | chr4.4:9303495-9303514 | MS.gene28381:intron | 65.0% |
| !! | GTGGGTGCTGGGGATGGTGA+AGG | - | chr4.4:9303501-9303520 | MS.gene28381:intron | 65.0% |
| ACCAAGCCCCCTCCCCCTCA+AGG | + | chr4.4:9303317-9303336 | None:intergenic | 70.0% | |
| CCAAGCCCCCTCCCCCTCAA+GGG | + | chr4.4:9303316-9303335 | None:intergenic | 70.0% | |
| CCCTTGAGGGGGAGGGGGCT+TGG | - | chr4.4:9303313-9303332 | MS.gene28381:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 9299371 | 9304151 | 9299371 | ID=MS.gene28381 |
| chr4.4 | mRNA | 9299371 | 9304151 | 9299371 | ID=MS.gene28381.t1;Parent=MS.gene28381 |
| chr4.4 | exon | 9303933 | 9304151 | 9303933 | ID=MS.gene28381.t1.exon1;Parent=MS.gene28381.t1 |
| chr4.4 | CDS | 9303933 | 9304151 | 9303933 | ID=cds.MS.gene28381.t1;Parent=MS.gene28381.t1 |
| chr4.4 | exon | 9303769 | 9303843 | 9303769 | ID=MS.gene28381.t1.exon2;Parent=MS.gene28381.t1 |
| chr4.4 | CDS | 9303769 | 9303843 | 9303769 | ID=cds.MS.gene28381.t1;Parent=MS.gene28381.t1 |
| chr4.4 | exon | 9303074 | 9303175 | 9303074 | ID=MS.gene28381.t1.exon3;Parent=MS.gene28381.t1 |
| chr4.4 | CDS | 9303074 | 9303175 | 9303074 | ID=cds.MS.gene28381.t1;Parent=MS.gene28381.t1 |
| chr4.4 | exon | 9302318 | 9302389 | 9302318 | ID=MS.gene28381.t1.exon4;Parent=MS.gene28381.t1 |
| chr4.4 | CDS | 9302318 | 9302389 | 9302318 | ID=cds.MS.gene28381.t1;Parent=MS.gene28381.t1 |
| chr4.4 | exon | 9302155 | 9302211 | 9302155 | ID=MS.gene28381.t1.exon5;Parent=MS.gene28381.t1 |
| chr4.4 | CDS | 9302155 | 9302211 | 9302155 | ID=cds.MS.gene28381.t1;Parent=MS.gene28381.t1 |
| chr4.4 | exon | 9301231 | 9301482 | 9301231 | ID=MS.gene28381.t1.exon6;Parent=MS.gene28381.t1 |
| chr4.4 | CDS | 9301231 | 9301482 | 9301231 | ID=cds.MS.gene28381.t1;Parent=MS.gene28381.t1 |
| chr4.4 | exon | 9299876 | 9300057 | 9299876 | ID=MS.gene28381.t1.exon7;Parent=MS.gene28381.t1 |
| chr4.4 | CDS | 9299876 | 9300057 | 9299876 | ID=cds.MS.gene28381.t1;Parent=MS.gene28381.t1 |
| chr4.4 | exon | 9299371 | 9299671 | 9299371 | ID=MS.gene28381.t1.exon8;Parent=MS.gene28381.t1 |
| chr4.4 | CDS | 9299371 | 9299671 | 9299371 | ID=cds.MS.gene28381.t1;Parent=MS.gene28381.t1 |
| Gene Sequence |
| Protein sequence |
