Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35114.t1 | RHN62821.1 | 98.5 | 531 | 8 | 0 | 1 | 531 | 32 | 562 | 1.1e-309 | 1071.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35114.t1 | Q93ZA3 | 63.6 | 530 | 183 | 6 | 1 | 525 | 6 | 530 | 3.1e-194 | 679.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35114.t1 | A0A072UQL2 | 98.5 | 531 | 8 | 0 | 1 | 531 | 6 | 536 | 7.9e-310 | 1071.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene35114 | 0.814979 | 1.17E-51 | -1.69E-46 |
MS.gene049227 | MS.gene35114 | 0.837424 | 5.24E-57 | -1.69E-46 |
MS.gene049350 | MS.gene35114 | 0.828272 | 9.86E-55 | -1.69E-46 |
MS.gene049499 | MS.gene35114 | 0.809851 | 1.54E-50 | -1.69E-46 |
MS.gene049711 | MS.gene35114 | 0.827643 | 1.40E-54 | -1.69E-46 |
MS.gene049807 | MS.gene35114 | 0.818019 | 2.44E-52 | -1.69E-46 |
MS.gene050238 | MS.gene35114 | 0.804682 | 1.92E-49 | -1.69E-46 |
MS.gene050414 | MS.gene35114 | 0.804811 | 1.81E-49 | -1.69E-46 |
MS.gene050646 | MS.gene35114 | 0.807293 | 5.43E-50 | -1.69E-46 |
MS.gene050657 | MS.gene35114 | 0.805995 | 1.02E-49 | -1.69E-46 |
MS.gene051279 | MS.gene35114 | 0.825498 | 4.54E-54 | -1.69E-46 |
MS.gene051852 | MS.gene35114 | 0.813442 | 2.55E-51 | -1.69E-46 |
MS.gene052016 | MS.gene35114 | 0.81885 | 1.58E-52 | -1.69E-46 |
MS.gene052463 | MS.gene35114 | 0.829502 | 4.97E-55 | -1.69E-46 |
MS.gene053143 | MS.gene35114 | 0.806032 | 1.00E-49 | -1.69E-46 |
MS.gene053144 | MS.gene35114 | 0.812181 | 4.82E-51 | -1.69E-46 |
MS.gene054584 | MS.gene35114 | 0.802923 | 4.46E-49 | -1.69E-46 |
MS.gene054709 | MS.gene35114 | 0.822401 | 2.42E-53 | -1.69E-46 |
MS.gene055141 | MS.gene35114 | 0.824696 | 7.02E-54 | -1.69E-46 |
MS.gene055469 | MS.gene35114 | 0.801933 | 7.13E-49 | -1.69E-46 |
MS.gene056677 | MS.gene35114 | 0.819385 | 1.19E-52 | -1.69E-46 |
MS.gene057102 | MS.gene35114 | 0.811326 | 7.40E-51 | -1.69E-46 |
MS.gene059170 | MS.gene35114 | 0.820853 | 5.51E-53 | -1.69E-46 |
MS.gene061100 | MS.gene35114 | 0.825034 | 5.84E-54 | -1.69E-46 |
MS.gene061188 | MS.gene35114 | 0.818756 | 1.66E-52 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35114.t1 | MTR_4g094520 | 98.493 | 531 | 8 | 0 | 1 | 531 | 6 | 536 | 0.0 | 1087 |
MS.gene35114.t1 | MTR_2g031390 | 71.132 | 530 | 152 | 1 | 1 | 529 | 2 | 531 | 0.0 | 777 |
MS.gene35114.t1 | MTR_4g094518 | 70.472 | 508 | 143 | 2 | 26 | 529 | 28 | 532 | 0.0 | 712 |
MS.gene35114.t1 | MTR_3g009820 | 51.136 | 528 | 247 | 8 | 5 | 527 | 1 | 522 | 0.0 | 544 |
MS.gene35114.t1 | MTR_3g009760 | 51.136 | 528 | 247 | 8 | 5 | 527 | 1 | 522 | 0.0 | 541 |
MS.gene35114.t1 | MTR_4g094488 | 52.700 | 537 | 237 | 9 | 4 | 525 | 1 | 535 | 0.0 | 540 |
MS.gene35114.t1 | MTR_4g094492 | 50.755 | 530 | 251 | 6 | 5 | 527 | 10 | 536 | 0.0 | 539 |
MS.gene35114.t1 | MTR_2g031590 | 49.713 | 523 | 255 | 4 | 12 | 528 | 13 | 533 | 0.0 | 536 |
MS.gene35114.t1 | MTR_4g094478 | 51.955 | 537 | 243 | 7 | 4 | 527 | 1 | 535 | 0.0 | 535 |
MS.gene35114.t1 | MTR_4g094498 | 49.814 | 538 | 255 | 5 | 1 | 527 | 1 | 534 | 0.0 | 531 |
MS.gene35114.t1 | MTR_4g094480 | 50.758 | 528 | 251 | 6 | 4 | 525 | 9 | 533 | 0.0 | 530 |
MS.gene35114.t1 | MTR_2g031560 | 48.381 | 525 | 265 | 5 | 7 | 527 | 1 | 523 | 0.0 | 530 |
MS.gene35114.t1 | MTR_3g009880 | 50.951 | 526 | 249 | 7 | 5 | 527 | 1 | 520 | 0.0 | 530 |
MS.gene35114.t1 | MTR_2g031420 | 52.756 | 508 | 234 | 5 | 21 | 527 | 25 | 527 | 0.0 | 523 |
MS.gene35114.t1 | MTR_4g094495 | 50.473 | 529 | 250 | 7 | 7 | 525 | 12 | 538 | 0.0 | 521 |
MS.gene35114.t1 | MTR_2g031460 | 49.713 | 523 | 255 | 6 | 8 | 527 | 10 | 527 | 1.66e-178 | 513 |
MS.gene35114.t1 | MTR_4g091150 | 51.473 | 509 | 234 | 8 | 27 | 527 | 37 | 540 | 7.14e-174 | 501 |
MS.gene35114.t1 | MTR_4g094515 | 50.189 | 530 | 254 | 4 | 7 | 528 | 624 | 1151 | 8.57e-174 | 521 |
MS.gene35114.t1 | MTR_4g094515 | 48.282 | 524 | 257 | 6 | 13 | 528 | 24 | 541 | 2.39e-156 | 476 |
MS.gene35114.t1 | MTR_4g094418 | 54.462 | 437 | 188 | 6 | 100 | 527 | 1 | 435 | 6.52e-171 | 497 |
MS.gene35114.t1 | MTR_2g031510 | 49.412 | 510 | 250 | 5 | 24 | 528 | 35 | 541 | 9.60e-171 | 494 |
MS.gene35114.t1 | MTR_2g031490 | 48.381 | 525 | 258 | 6 | 14 | 528 | 18 | 539 | 1.26e-167 | 486 |
MS.gene35114.t1 | MTR_4g091200 | 47.368 | 532 | 262 | 8 | 1 | 525 | 4 | 524 | 1.76e-167 | 485 |
MS.gene35114.t1 | MTR_6g017205 | 48.000 | 525 | 257 | 8 | 7 | 525 | 10 | 524 | 1.39e-166 | 483 |
MS.gene35114.t1 | MTR_4g091190 | 46.792 | 530 | 270 | 7 | 1 | 525 | 4 | 526 | 1.53e-165 | 480 |
MS.gene35114.t1 | MTR_4g088355 | 48.611 | 504 | 247 | 7 | 29 | 525 | 33 | 531 | 4.00e-163 | 474 |
MS.gene35114.t1 | MTR_4g057990 | 46.970 | 528 | 269 | 7 | 1 | 525 | 1 | 520 | 4.62e-163 | 473 |
MS.gene35114.t1 | MTR_4g091170 | 47.368 | 456 | 213 | 7 | 75 | 525 | 107 | 540 | 2.08e-150 | 443 |
MS.gene35114.t1 | MTR_2g023590 | 47.097 | 465 | 239 | 5 | 64 | 525 | 4 | 464 | 9.22e-148 | 432 |
MS.gene35114.t1 | MTR_1g076830 | 39.429 | 525 | 302 | 9 | 15 | 530 | 21 | 538 | 3.77e-120 | 364 |
MS.gene35114.t1 | MTR_3g009850 | 52.193 | 228 | 107 | 2 | 302 | 527 | 1 | 228 | 1.22e-79 | 249 |
MS.gene35114.t1 | MTR_2g031600 | 53.648 | 233 | 106 | 1 | 12 | 244 | 14 | 244 | 1.40e-79 | 255 |
MS.gene35114.t1 | MTR_2g031600 | 47.531 | 162 | 84 | 1 | 368 | 528 | 240 | 401 | 3.17e-47 | 169 |
MS.gene35114.t1 | MTR_2g084370 | 41.441 | 111 | 43 | 2 | 126 | 236 | 1 | 89 | 4.82e-26 | 102 |
MS.gene35114.t1 | MTR_8g062280 | 46.392 | 97 | 24 | 1 | 428 | 524 | 4 | 72 | 2.07e-22 | 91.7 |
MS.gene35114.t1 | MTR_2g084405 | 50.633 | 79 | 39 | 0 | 126 | 204 | 1 | 79 | 2.86e-19 | 83.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35114.t1 | AT1G30760 | 64.752 | 505 | 171 | 3 | 24 | 525 | 48 | 548 | 0.0 | 665 |
MS.gene35114.t1 | AT1G30760 | 64.752 | 505 | 171 | 3 | 24 | 525 | 30 | 530 | 0.0 | 664 |
MS.gene35114.t1 | AT2G34790 | 62.141 | 523 | 190 | 4 | 6 | 525 | 11 | 528 | 0.0 | 662 |
MS.gene35114.t1 | AT5G44400 | 61.017 | 531 | 197 | 7 | 4 | 527 | 9 | 536 | 0.0 | 655 |
MS.gene35114.t1 | AT5G44390 | 56.262 | 535 | 223 | 7 | 3 | 529 | 11 | 542 | 0.0 | 605 |
MS.gene35114.t1 | AT5G44380 | 57.558 | 516 | 212 | 6 | 18 | 528 | 67 | 580 | 0.0 | 579 |
MS.gene35114.t1 | AT5G44380 | 57.558 | 516 | 212 | 6 | 18 | 528 | 27 | 540 | 0.0 | 579 |
MS.gene35114.t1 | AT1G30700 | 50.095 | 525 | 256 | 4 | 7 | 528 | 6 | 527 | 6.17e-177 | 509 |
MS.gene35114.t1 | AT5G44360 | 48.496 | 532 | 259 | 9 | 5 | 529 | 9 | 532 | 6.61e-170 | 491 |
MS.gene35114.t1 | AT5G44360 | 48.496 | 532 | 259 | 9 | 5 | 529 | 25 | 548 | 8.78e-170 | 491 |
MS.gene35114.t1 | AT1G26380 | 48.864 | 528 | 258 | 7 | 6 | 527 | 4 | 525 | 8.54e-169 | 488 |
MS.gene35114.t1 | AT4G20860 | 49.126 | 515 | 246 | 9 | 22 | 527 | 22 | 529 | 2.69e-168 | 487 |
MS.gene35114.t1 | AT4G20800 | 49.203 | 502 | 249 | 4 | 27 | 526 | 27 | 524 | 1.12e-166 | 483 |
MS.gene35114.t1 | AT4G20820 | 47.547 | 530 | 261 | 8 | 3 | 527 | 9 | 526 | 1.05e-165 | 481 |
MS.gene35114.t1 | AT1G26400 | 47.826 | 529 | 267 | 6 | 1 | 526 | 1 | 523 | 8.87e-165 | 478 |
MS.gene35114.t1 | AT1G26420 | 48.000 | 525 | 260 | 6 | 14 | 529 | 7 | 527 | 9.80e-165 | 478 |
MS.gene35114.t1 | AT1G11770 | 47.103 | 535 | 267 | 7 | 5 | 528 | 1 | 530 | 1.28e-163 | 475 |
MS.gene35114.t1 | AT1G26390 | 49.008 | 504 | 251 | 4 | 29 | 529 | 29 | 529 | 8.73e-163 | 473 |
MS.gene35114.t1 | AT1G26410 | 47.913 | 503 | 256 | 5 | 29 | 529 | 53 | 551 | 1.47e-161 | 471 |
MS.gene35114.t1 | AT1G34575 | 45.180 | 529 | 264 | 10 | 7 | 525 | 10 | 522 | 2.30e-160 | 467 |
MS.gene35114.t1 | AT1G30730 | 46.110 | 527 | 275 | 6 | 4 | 525 | 1 | 523 | 2.71e-159 | 464 |
MS.gene35114.t1 | AT4G20840 | 48.323 | 507 | 253 | 6 | 25 | 527 | 34 | 535 | 4.89e-159 | 464 |
MS.gene35114.t1 | AT1G30710 | 45.247 | 526 | 268 | 9 | 12 | 527 | 13 | 528 | 2.33e-158 | 462 |
MS.gene35114.t1 | AT5G44440 | 45.301 | 532 | 277 | 7 | 1 | 525 | 3 | 527 | 1.15e-156 | 457 |
MS.gene35114.t1 | AT1G30720 | 46.784 | 513 | 266 | 5 | 16 | 525 | 16 | 524 | 1.90e-156 | 457 |
MS.gene35114.t1 | AT5G44440 | 45.301 | 532 | 277 | 7 | 1 | 525 | 73 | 597 | 2.10e-155 | 457 |
MS.gene35114.t1 | AT1G30740 | 47.419 | 523 | 258 | 8 | 15 | 528 | 15 | 529 | 2.76e-151 | 444 |
MS.gene35114.t1 | AT1G30740 | 47.419 | 523 | 258 | 8 | 15 | 528 | 18 | 532 | 2.91e-151 | 444 |
MS.gene35114.t1 | AT5G44410 | 47.059 | 544 | 252 | 12 | 1 | 525 | 1 | 527 | 4.96e-151 | 443 |
MS.gene35114.t1 | AT4G20830 | 47.451 | 510 | 259 | 6 | 22 | 527 | 32 | 536 | 4.39e-150 | 441 |
MS.gene35114.t1 | AT1G01980 | 47.093 | 516 | 259 | 8 | 22 | 528 | 25 | 535 | 1.09e-149 | 440 |
MS.gene35114.t1 | AT4G20830 | 47.451 | 510 | 259 | 6 | 22 | 527 | 32 | 536 | 1.85e-149 | 441 |
MS.gene35114.t1 | AT2G34810 | 44.788 | 518 | 268 | 9 | 22 | 527 | 28 | 539 | 8.43e-143 | 422 |
Find 114 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATGGGAGAAGACCTATTT+TGG | 0.145172 | 4.4:-19828997 | MS.gene35114:CDS |
TTGCTAACTCTTGGGGTTAT+AGG | 0.226534 | 4.4:-19828184 | MS.gene35114:CDS |
TACAAAATTCAGTACTTATC+TGG | 0.232561 | 4.4:-19828368 | MS.gene35114:CDS |
AGGGAATTGAGGGAAGTTTC+TGG | 0.233163 | 4.4:+19828506 | None:intergenic |
GATTGAAGTGTAAGACTTAT+TGG | 0.240801 | 4.4:+19829498 | None:intergenic |
GCAGGCCTTTGTACATCTTT+AGG | 0.242864 | 4.4:-19829142 | MS.gene35114:CDS |
TATAGATTGAAGAGGGAAAT+TGG | 0.267535 | 4.4:+19829527 | None:intergenic |
TTTCTTGTTAAACCCAATTC+AGG | 0.270282 | 4.4:+19828674 | None:intergenic |
TTTCCCTGGAGCAGAACTTC+TGG | 0.282559 | 4.4:+19828584 | None:intergenic |
TTGATCCATCTAATTTCTTT+AGG | 0.288821 | 4.4:-19828115 | MS.gene35114:CDS |
GTCTTTCTCTTGCTAACTCT+TGG | 0.294277 | 4.4:-19828193 | MS.gene35114:CDS |
AATTATAGAGATTTGGATAT+AGG | 0.299944 | 4.4:-19828239 | MS.gene35114:CDS |
TCTTACCAAGCTCTATTTCT+TGG | 0.303983 | 4.4:-19828737 | MS.gene35114:CDS |
TAGGGATTCCATATCATTAA+AGG | 0.306572 | 4.4:+19828455 | None:intergenic |
ATGATGGTCCTTTAATGATA+TGG | 0.309466 | 4.4:-19828463 | MS.gene35114:CDS |
GCTAAAATCGTTAATGCTAA+TGG | 0.309493 | 4.4:-19829040 | MS.gene35114:CDS |
CCAGGCAATGGTAGTGTTCC+TGG | 0.320965 | 4.4:-19828779 | MS.gene35114:CDS |
TCTTTCTCTTGCTAACTCTT+GGG | 0.323097 | 4.4:-19828192 | MS.gene35114:CDS |
CTATGTGAATTATAGAGATT+TGG | 0.331419 | 4.4:-19828246 | MS.gene35114:CDS |
TTTAACAAGAAAGGATTGTT+TGG | 0.345762 | 4.4:-19828663 | MS.gene35114:CDS |
ACTTCTGGAGGTGTTGTATT+GGG | 0.356109 | 4.4:+19828599 | None:intergenic |
GATTGATGGAGAAAAGAATA+TGG | 0.359004 | 4.4:-19828342 | MS.gene35114:CDS |
GTGAATATGAAATCTGGTTT+TGG | 0.363570 | 4.4:+19829430 | None:intergenic |
GGAGGCGGAGGAGGCAGCTT+CGG | 0.369626 | 4.4:-19828965 | MS.gene35114:CDS |
ATTGAAGAGGGAAATTGGTT+TGG | 0.371420 | 4.4:+19829532 | None:intergenic |
GAAACAAGCTTCTTTATAGA+TGG | 0.373043 | 4.4:-19828856 | MS.gene35114:CDS |
ATTCAAGTGGGCGCAACTAT+TGG | 0.377296 | 4.4:-19829214 | MS.gene35114:CDS |
TCTCTGGTGGAAGATCAAAT+TGG | 0.387633 | 4.4:-19828936 | MS.gene35114:CDS |
ATTATAGAGATTTGGATATA+GGG | 0.388143 | 4.4:-19828238 | MS.gene35114:CDS |
TGAATTGGGTTTAACAAGAA+AGG | 0.388314 | 4.4:-19828672 | MS.gene35114:CDS |
GAATTTGAGCATGAAGTGAT+AGG | 0.400466 | 4.4:+19829554 | None:intergenic |
ACACTTTCTTACTTACCAAT+TGG | 0.404020 | 4.4:+19828068 | None:intergenic |
CTCATTACCGGAGGTGCTTA+CGG | 0.407070 | 4.4:-19829109 | MS.gene35114:CDS |
AGGATTGTTTGGAAACTAGT+TGG | 0.409589 | 4.4:-19828652 | MS.gene35114:CDS |
TACTTATCTGGATGGATTGA+TGG | 0.410447 | 4.4:-19828356 | MS.gene35114:CDS |
GAAAACTCTGCTTCATAACT+TGG | 0.419933 | 4.4:+19828696 | None:intergenic |
AACTTCTGGAGGTGTTGTAT+TGG | 0.421717 | 4.4:+19828598 | None:intergenic |
TCAGTTCATGGCTTCCCTGC+AGG | 0.425476 | 4.4:-19829160 | MS.gene35114:CDS |
GGTTCTATGATGAGAAAGTA+TGG | 0.433505 | 4.4:-19829088 | MS.gene35114:CDS |
GGTATCGGTGGCCTCATTAC+CGG | 0.435936 | 4.4:-19829121 | MS.gene35114:CDS |
TACCAAGCTCTATTTCTTGG+TGG | 0.445176 | 4.4:-19828734 | MS.gene35114:CDS |
CCTACTCATCATTCCTCCAT+AGG | 0.458631 | 4.4:+19828436 | None:intergenic |
CTTTCTCTTGCTAACTCTTG+GGG | 0.458680 | 4.4:-19828191 | MS.gene35114:CDS |
CTCCTCTTATTGCCCAAAAT+AGG | 0.459368 | 4.4:+19828984 | None:intergenic |
GCAGCTTCGGAGTTATTCTC+TGG | 0.461190 | 4.4:-19828952 | MS.gene35114:CDS |
GCAATAAGAGGAGGCGGAGG+AGG | 0.463947 | 4.4:-19828974 | MS.gene35114:CDS |
GGAAACTAGTTGGATCAAAT+CGG | 0.466810 | 4.4:-19828642 | MS.gene35114:CDS |
AGGTGTTGTATTGGGATAAC+CGG | 0.468626 | 4.4:+19828607 | None:intergenic |
CTTTGTACATCTTTAGGTAT+CGG | 0.472738 | 4.4:-19829136 | MS.gene35114:CDS |
TCATGCCTAAAGAAATTAGA+TGG | 0.473346 | 4.4:+19828110 | None:intergenic |
ACCTCCAGAAGTTCTGCTCC+AGG | 0.474916 | 4.4:-19828588 | MS.gene35114:CDS |
ATATTCCACATAACACGGCT+TGG | 0.479287 | 4.4:-19829237 | MS.gene35114:CDS |
AAAGATGTACAAAGGCCTGC+AGG | 0.483734 | 4.4:+19829145 | None:intergenic |
TTGAAGTAAGCCTTGGATGT+AGG | 0.484349 | 4.4:+19828560 | None:intergenic |
TTCTTCAATTGAAACTGAAG+TGG | 0.484924 | 4.4:+19829591 | None:intergenic |
ATGAAGGCAATAGATACCTT+AGG | 0.486269 | 4.4:+19829455 | None:intergenic |
CCCTGGAGCAGAACTTCTGG+AGG | 0.490999 | 4.4:+19828587 | None:intergenic |
TACTTACCAATTGGAAGTGG+AGG | 0.497327 | 4.4:+19828077 | None:intergenic |
CATAGAACCGTAAGCACCTC+CGG | 0.501126 | 4.4:+19829102 | None:intergenic |
AAACTTCCCTCAATTCCCTA+TGG | 0.503759 | 4.4:-19828502 | MS.gene35114:CDS |
AATGGTGTGAATATGAAATC+TGG | 0.504260 | 4.4:+19829424 | None:intergenic |
TGAATCCAAGCCGTGTTATG+TGG | 0.508263 | 4.4:+19829232 | None:intergenic |
GAACTACGAAAGTTGCTAAG+AGG | 0.515266 | 4.4:+19829632 | None:intergenic |
CCAGGAACACTACCATTGCC+TGG | 0.516099 | 4.4:+19828779 | None:intergenic |
AGTATCCCTCCACTTCCAAT+TGG | 0.521965 | 4.4:-19828083 | MS.gene35114:CDS |
CGTAAGCACCTCCGGTAATG+AGG | 0.522399 | 4.4:+19829110 | None:intergenic |
CACGTAGTTTAGCCAGGTCT+AGG | 0.524645 | 4.4:+19829272 | None:intergenic |
CTCCACCAAGAAATAGAGCT+TGG | 0.526513 | 4.4:+19828732 | None:intergenic |
TCTTACTTACCAATTGGAAG+TGG | 0.527064 | 4.4:+19828074 | None:intergenic |
TTAATGATATGGAATCCCTA+TGG | 0.528439 | 4.4:-19828452 | MS.gene35114:CDS |
ATTCTTGACAGAAAAGCAAT+GGG | 0.529934 | 4.4:-19829013 | MS.gene35114:CDS |
ATATGGCAAAACATATGAGT+TGG | 0.530345 | 4.4:-19828325 | MS.gene35114:CDS |
ATTGAAACTGAAGTGGAAAG+TGG | 0.535886 | 4.4:+19829598 | None:intergenic |
AAATCGGTTCTTTATATCGC+CGG | 0.536045 | 4.4:-19828626 | MS.gene35114:CDS |
GCTTCGGAGTTATTCTCTGG+TGG | 0.536428 | 4.4:-19828949 | MS.gene35114:CDS |
TTACTGCACGTAGTTTAGCC+AGG | 0.536709 | 4.4:+19829266 | None:intergenic |
CTACTCATCATTCCTCCATA+GGG | 0.537440 | 4.4:+19828437 | None:intergenic |
AAATTCAGTACTTATCTGGA+TGG | 0.539864 | 4.4:-19828364 | MS.gene35114:CDS |
CGTTGATATTCCACATAACA+CGG | 0.539970 | 4.4:-19829242 | MS.gene35114:CDS |
TAACTTCAATAGGTTAGTAA+AGG | 0.543846 | 4.4:-19828150 | MS.gene35114:CDS |
AATTCTTGACAGAAAAGCAA+TGG | 0.545747 | 4.4:-19829014 | MS.gene35114:CDS |
TTGCACATATCACAGCTGCT+TGG | 0.546395 | 4.4:+19829386 | None:intergenic |
ATGATGAGAAAGTATGGCCT+CGG | 0.549358 | 4.4:-19829082 | MS.gene35114:CDS |
CTGCTTGGACTTGTGAGTCA+TGG | 0.555171 | 4.4:+19829401 | None:intergenic |
AGTGTAAGACTTATTGGTTG+AGG | 0.555975 | 4.4:+19829504 | None:intergenic |
AGCGGAGGACACGACTATGA+AGG | 0.557599 | 4.4:-19829334 | MS.gene35114:CDS |
GTTGAGGTATAGATTGAAGA+GGG | 0.560414 | 4.4:+19829520 | None:intergenic |
AATCCACTGCTCAAAACCTA+AGG | 0.560820 | 4.4:-19829471 | MS.gene35114:CDS |
ACCGTTCATGATCCTAGACC+TGG | 0.569999 | 4.4:-19829284 | MS.gene35114:CDS |
TGGGCAATAAGAGGAGGCGG+AGG | 0.574351 | 4.4:-19828977 | MS.gene35114:CDS |
AACTACGAAAGTTGCTAAGA+GGG | 0.580812 | 4.4:+19829633 | None:intergenic |
TGTACATCTTTAGGTATCGG+TGG | 0.582234 | 4.4:-19829133 | MS.gene35114:CDS |
CCTATGGAGGAATGATGAGT+AGG | 0.584439 | 4.4:-19828436 | MS.gene35114:CDS |
CAAAACATATGAGTTGGATG+AGG | 0.585356 | 4.4:-19828319 | MS.gene35114:CDS |
GTCTTGATTCAACCAGGCAA+TGG | 0.587697 | 4.4:-19828791 | MS.gene35114:CDS |
GCCAGGTCTAGGATCATGAA+CGG | 0.594071 | 4.4:+19829283 | None:intergenic |
GTAGTTACAGTTCTTTGACC+AGG | 0.595410 | 4.4:+19828761 | None:intergenic |
ATCAGAGTCTTGATTCAACC+AGG | 0.596708 | 4.4:-19828797 | MS.gene35114:CDS |
ACTTACCAATTGGAAGTGGA+GGG | 0.597383 | 4.4:+19828078 | None:intergenic |
TGGACTTGTGAGTCATGGAA+TGG | 0.604528 | 4.4:+19829406 | None:intergenic |
AAGATGTACAAAGGCCTGCA+GGG | 0.604713 | 4.4:+19829146 | None:intergenic |
CCAGGGAAAACCTACATCCA+AGG | 0.606686 | 4.4:-19828570 | MS.gene35114:CDS |
CCTCCAGAAGTTCTGCTCCA+GGG | 0.608247 | 4.4:-19828587 | MS.gene35114:CDS |
GGTTGAGGTATAGATTGAAG+AGG | 0.611987 | 4.4:+19829519 | None:intergenic |
ATCGGTGGCCTCATTACCGG+AGG | 0.636534 | 4.4:-19829118 | MS.gene35114:CDS |
AACACGGCTTGGATTCAAGT+GGG | 0.646968 | 4.4:-19829226 | MS.gene35114:CDS |
ATGATATGGAATCCCTATGG+AGG | 0.647237 | 4.4:-19828449 | MS.gene35114:CDS |
TAACACGGCTTGGATTCAAG+TGG | 0.652527 | 4.4:-19829227 | MS.gene35114:CDS |
CATATGAGAATACGAAGCGG+AGG | 0.688013 | 4.4:-19829349 | MS.gene35114:CDS |
CGATACCTAAAGATGTACAA+AGG | 0.714905 | 4.4:+19829137 | None:intergenic |
ACAAAGAGTCTAGAACAAGG+TGG | 0.730420 | 4.4:-19828878 | MS.gene35114:CDS |
ATTCATATGAGAATACGAAG+CGG | 0.748676 | 4.4:-19829352 | MS.gene35114:CDS |
GTAACAAAGAGTCTAGAACA+AGG | 0.765309 | 4.4:-19828881 | MS.gene35114:CDS |
CAACAACGTTGTCAACACCG+AGG | 0.799916 | 4.4:+19829065 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATAGAGATTTGGATAT+AGG | - | chr4.4:19829486-19829505 | MS.gene35114:CDS | 20.0% |
!! | ATTATAGAGATTTGGATATA+GGG | - | chr4.4:19829487-19829506 | MS.gene35114:CDS | 20.0% |
!!! | AAAATTTTTCTTCAAGATGA+TGG | - | chr4.4:19829246-19829265 | MS.gene35114:CDS | 20.0% |
!!! | AAGAGATTTTCATCAATATT+TGG | + | chr4.4:19828907-19828926 | None:intergenic | 20.0% |
!!! | TTGAAGAAAAATTTTCCATA+GGG | + | chr4.4:19829241-19829260 | None:intergenic | 20.0% |
! | CTATGTGAATTATAGAGATT+TGG | - | chr4.4:19829479-19829498 | MS.gene35114:CDS | 25.0% |
! | TAACTTCAATAGGTTAGTAA+AGG | - | chr4.4:19829575-19829594 | MS.gene35114:CDS | 25.0% |
! | TACAAAATTCAGTACTTATC+TGG | - | chr4.4:19829357-19829376 | MS.gene35114:CDS | 25.0% |
! | TTATGCATCAAAAAATCCAA+GGG | - | chr4.4:19829452-19829471 | MS.gene35114:CDS | 25.0% |
! | TTGATCCATCTAATTTCTTT+AGG | - | chr4.4:19829610-19829629 | MS.gene35114:CDS | 25.0% |
! | TTTAACAAGAAAGGATTGTT+TGG | - | chr4.4:19829062-19829081 | MS.gene35114:CDS | 25.0% |
!! | CTTGAAGAAAAATTTTCCAT+AGG | + | chr4.4:19829242-19829261 | None:intergenic | 25.0% |
!!! | ATTTTAAGGGTAACTTCAAT+AGG | - | chr4.4:19829565-19829584 | MS.gene35114:CDS | 25.0% |
AAATTCAGTACTTATCTGGA+TGG | - | chr4.4:19829361-19829380 | MS.gene35114:CDS | 30.0% | |
AATGGTGTGAATATGAAATC+TGG | + | chr4.4:19828304-19828323 | None:intergenic | 30.0% | |
AATTCTTGACAGAAAAGCAA+TGG | - | chr4.4:19828711-19828730 | MS.gene35114:CDS | 30.0% | |
ATATGGCAAAACATATGAGT+TGG | - | chr4.4:19829400-19829419 | MS.gene35114:CDS | 30.0% | |
ATGATGGTCCTTTAATGATA+TGG | - | chr4.4:19829262-19829281 | MS.gene35114:CDS | 30.0% | |
ATTCATATGAGAATACGAAG+CGG | - | chr4.4:19828373-19828392 | MS.gene35114:CDS | 30.0% | |
ATTCTTGACAGAAAAGCAAT+GGG | - | chr4.4:19828712-19828731 | MS.gene35114:CDS | 30.0% | |
CTTATGCATCAAAAAATCCA+AGG | - | chr4.4:19829451-19829470 | MS.gene35114:CDS | 30.0% | |
CTTTGTACATCTTTAGGTAT+CGG | - | chr4.4:19828589-19828608 | MS.gene35114:CDS | 30.0% | |
GAAACAAGCTTCTTTATAGA+TGG | - | chr4.4:19828869-19828888 | MS.gene35114:CDS | 30.0% | |
GATTGAAGTGTAAGACTTAT+TGG | + | chr4.4:19828230-19828249 | None:intergenic | 30.0% | |
GATTGATGGAGAAAAGAATA+TGG | - | chr4.4:19829383-19829402 | MS.gene35114:CDS | 30.0% | |
GCTAAAATCGTTAATGCTAA+TGG | - | chr4.4:19828685-19828704 | MS.gene35114:CDS | 30.0% | |
GTGATATGTGCAAAAAAACA+TGG | - | chr4.4:19828349-19828368 | MS.gene35114:CDS | 30.0% | |
TAGGGATTCCATATCATTAA+AGG | + | chr4.4:19829273-19829292 | None:intergenic | 30.0% | |
TATAGATTGAAGAGGGAAAT+TGG | + | chr4.4:19828201-19828220 | None:intergenic | 30.0% | |
TCATGCCTAAAGAAATTAGA+TGG | + | chr4.4:19829618-19829637 | None:intergenic | 30.0% | |
TGAATTGGGTTTAACAAGAA+AGG | - | chr4.4:19829053-19829072 | MS.gene35114:CDS | 30.0% | |
TTAATGATATGGAATCCCTA+TGG | - | chr4.4:19829273-19829292 | MS.gene35114:CDS | 30.0% | |
TTCTTCAATTGAAACTGAAG+TGG | + | chr4.4:19828137-19828156 | None:intergenic | 30.0% | |
TTTCTTGTTAAACCCAATTC+AGG | + | chr4.4:19829054-19829073 | None:intergenic | 30.0% | |
! | AAAAACTGTGACAGTTTTCA+CGG | - | chr4.4:19828822-19828841 | MS.gene35114:CDS | 30.0% |
! | AAATTTTCCATAGGGAATTG+AGG | + | chr4.4:19829233-19829252 | None:intergenic | 30.0% |
! | AATTTTCCATAGGGAATTGA+GGG | + | chr4.4:19829232-19829251 | None:intergenic | 30.0% |
! | TAATTCACATAGTTTTCCCT+TGG | + | chr4.4:19829471-19829490 | None:intergenic | 30.0% |
! | TTGGGGTTATAGGTATTTTA+AGG | - | chr4.4:19829551-19829570 | MS.gene35114:CDS | 30.0% |
!! | GTGAATATGAAATCTGGTTT+TGG | + | chr4.4:19828298-19828317 | None:intergenic | 30.0% |
!! | TGGGGTTATAGGTATTTTAA+GGG | - | chr4.4:19829552-19829571 | MS.gene35114:CDS | 30.0% |
!!! | CTTGGATTTTTTGATGCATA+AGG | + | chr4.4:19829453-19829472 | None:intergenic | 30.0% |
AACTACGAAAGTTGCTAAGA+GGG | + | chr4.4:19828095-19828114 | None:intergenic | 35.0% | |
AGGATTGTTTGGAAACTAGT+TGG | - | chr4.4:19829073-19829092 | MS.gene35114:CDS | 35.0% | |
ATGAAGGCAATAGATACCTT+AGG | + | chr4.4:19828273-19828292 | None:intergenic | 35.0% | |
ATTGAAACTGAAGTGGAAAG+TGG | + | chr4.4:19828130-19828149 | None:intergenic | 35.0% | |
ATTGAAGAGGGAAATTGGTT+TGG | + | chr4.4:19828196-19828215 | None:intergenic | 35.0% | |
CGATACCTAAAGATGTACAA+AGG | + | chr4.4:19828591-19828610 | None:intergenic | 35.0% | |
CGTTGATATTCCACATAACA+CGG | - | chr4.4:19828483-19828502 | MS.gene35114:CDS | 35.0% | |
GAAAACTCTGCTTCATAACT+TGG | + | chr4.4:19829032-19829051 | None:intergenic | 35.0% | |
GAATTTGAGCATGAAGTGAT+AGG | + | chr4.4:19828174-19828193 | None:intergenic | 35.0% | |
GGAAACTAGTTGGATCAAAT+CGG | - | chr4.4:19829083-19829102 | MS.gene35114:CDS | 35.0% | |
GGTTCTATGATGAGAAAGTA+TGG | - | chr4.4:19828637-19828656 | MS.gene35114:CDS | 35.0% | |
GTTGAGGTATAGATTGAAGA+GGG | + | chr4.4:19828208-19828227 | None:intergenic | 35.0% | |
TCTTTCTCTTGCTAACTCTT+GGG | - | chr4.4:19829533-19829552 | MS.gene35114:CDS | 35.0% | |
! | AAATCGGTTCTTTATATCGC+CGG | - | chr4.4:19829099-19829118 | MS.gene35114:CDS | 35.0% |
! | AAGCAGAGTTTTCCTGAATT+GGG | - | chr4.4:19829039-19829058 | MS.gene35114:CDS | 35.0% |
! | AATGGGAGAAGACCTATTTT+GGG | - | chr4.4:19828729-19828748 | MS.gene35114:CDS | 35.0% |
! | AGTGTAAGACTTATTGGTTG+AGG | + | chr4.4:19828224-19828243 | None:intergenic | 35.0% |
! | CAAAACATATGAGTTGGATG+AGG | - | chr4.4:19829406-19829425 | MS.gene35114:CDS | 35.0% |
! | GTAACAAAGAGTCTAGAACA+AGG | - | chr4.4:19828844-19828863 | MS.gene35114:CDS | 35.0% |
! | GTGAAAACTGTCACAGTTTT+TGG | + | chr4.4:19828823-19828842 | None:intergenic | 35.0% |
! | TAAAGAGTTCCTTTTCTGTG+AGG | + | chr4.4:19829339-19829358 | None:intergenic | 35.0% |
! | TCTTACCAAGCTCTATTTCT+TGG | - | chr4.4:19828988-19829007 | MS.gene35114:CDS | 35.0% |
!! | TACTTATCTGGATGGATTGA+TGG | - | chr4.4:19829369-19829388 | MS.gene35114:CDS | 35.0% |
!!! | AAATCTGGTTTTGGCAATGA+AGG | + | chr4.4:19828289-19828308 | None:intergenic | 35.0% |
!!! | TTTTGCTTTGAAGTAAGCCT+TGG | + | chr4.4:19829175-19829194 | None:intergenic | 35.0% |
AAACTTCCCTCAATTCCCTA+TGG | - | chr4.4:19829223-19829242 | MS.gene35114:CDS | 40.0% | |
AATCCACTGCTCAAAACCTA+AGG | - | chr4.4:19828254-19828273 | MS.gene35114:CDS | 40.0% | |
ACTTACCAATTGGAAGTGGA+GGG | + | chr4.4:19829650-19829669 | None:intergenic | 40.0% | |
ATATTCCACATAACACGGCT+TGG | - | chr4.4:19828488-19828507 | MS.gene35114:CDS | 40.0% | |
ATCAGAGTCTTGATTCAACC+AGG | - | chr4.4:19828928-19828947 | MS.gene35114:CDS | 40.0% | |
ATGATATGGAATCCCTATGG+AGG | - | chr4.4:19829276-19829295 | MS.gene35114:CDS | 40.0% | |
CTACTCATCATTCCTCCATA+GGG | + | chr4.4:19829291-19829310 | None:intergenic | 40.0% | |
CTCCTCTTATTGCCCAAAAT+AGG | + | chr4.4:19828744-19828763 | None:intergenic | 40.0% | |
CTTTCTCTTGCTAACTCTTG+GGG | - | chr4.4:19829534-19829553 | MS.gene35114:CDS | 40.0% | |
GAACTACGAAAGTTGCTAAG+AGG | + | chr4.4:19828096-19828115 | None:intergenic | 40.0% | |
GGTTGAGGTATAGATTGAAG+AGG | + | chr4.4:19828209-19828228 | None:intergenic | 40.0% | |
GTAGTTACAGTTCTTTGACC+AGG | + | chr4.4:19828967-19828986 | None:intergenic | 40.0% | |
GTCTTTCTCTTGCTAACTCT+TGG | - | chr4.4:19829532-19829551 | MS.gene35114:CDS | 40.0% | |
TACTTACCAATTGGAAGTGG+AGG | + | chr4.4:19829651-19829670 | None:intergenic | 40.0% | |
TCCGCAAAAAGTTCAGTTCA+TGG | - | chr4.4:19828553-19828572 | MS.gene35114:CDS | 40.0% | |
TCTCTGGTGGAAGATCAAAT+TGG | - | chr4.4:19828789-19828808 | MS.gene35114:CDS | 40.0% | |
TTGAAGTAAGCCTTGGATGT+AGG | + | chr4.4:19829168-19829187 | None:intergenic | 40.0% | |
TTGCTAACTCTTGGGGTTAT+AGG | - | chr4.4:19829541-19829560 | MS.gene35114:CDS | 40.0% | |
! | ACAAAGAGTCTAGAACAAGG+TGG | - | chr4.4:19828847-19828866 | MS.gene35114:CDS | 40.0% |
! | ACACCTTTTCCTCACAGAAA+AGG | - | chr4.4:19829327-19829346 | MS.gene35114:CDS | 40.0% |
! | AGGTGTTGTATTGGGATAAC+CGG | + | chr4.4:19829121-19829140 | None:intergenic | 40.0% |
! | ATGATGAGAAAGTATGGCCT+CGG | - | chr4.4:19828643-19828662 | MS.gene35114:CDS | 40.0% |
! | CAATGGGAGAAGACCTATTT+TGG | - | chr4.4:19828728-19828747 | MS.gene35114:CDS | 40.0% |
! | GAAGCAGAGTTTTCCTGAAT+TGG | - | chr4.4:19829038-19829057 | MS.gene35114:CDS | 40.0% |
! | GCCATGAACTGAACTTTTTG+CGG | + | chr4.4:19828557-19828576 | None:intergenic | 40.0% |
! | GTTCCTTTTCTGTGAGGAAA+AGG | + | chr4.4:19829333-19829352 | None:intergenic | 40.0% |
! | TACCAAGCTCTATTTCTTGG+TGG | - | chr4.4:19828991-19829010 | MS.gene35114:CDS | 40.0% |
!! | AACTTCTGGAGGTGTTGTAT+TGG | + | chr4.4:19829130-19829149 | None:intergenic | 40.0% |
!! | ACTTCTGGAGGTGTTGTATT+GGG | + | chr4.4:19829129-19829148 | None:intergenic | 40.0% |
!! | CTATTTTGGGCAATAAGAGG+AGG | - | chr4.4:19828742-19828761 | MS.gene35114:CDS | 40.0% |
!! | GACCTATTTTGGGCAATAAG+AGG | - | chr4.4:19828739-19828758 | MS.gene35114:CDS | 40.0% |
!! | TGTACATCTTTAGGTATCGG+TGG | - | chr4.4:19828592-19828611 | MS.gene35114:CDS | 40.0% |
!!! | ATACCTTAGGTTTTGAGCAG+TGG | + | chr4.4:19828260-19828279 | None:intergenic | 40.0% |
AAAGATGTACAAAGGCCTGC+AGG | + | chr4.4:19828583-19828602 | None:intergenic | 45.0% | |
AAGATGTACAAAGGCCTGCA+GGG | + | chr4.4:19828582-19828601 | None:intergenic | 45.0% | |
AGGGAATTGAGGGAAGTTTC+TGG | + | chr4.4:19829222-19829241 | None:intergenic | 45.0% | |
AGTATCCCTCCACTTCCAAT+TGG | - | chr4.4:19829642-19829661 | MS.gene35114:CDS | 45.0% | |
ATTCAAGTGGGCGCAACTAT+TGG | - | chr4.4:19828511-19828530 | MS.gene35114:CDS | 45.0% | |
CATATGAGAATACGAAGCGG+AGG | - | chr4.4:19828376-19828395 | MS.gene35114:CDS | 45.0% | |
CCTACTCATCATTCCTCCAT+AGG | + | chr4.4:19829292-19829311 | None:intergenic | 45.0% | |
CCTATGGAGGAATGATGAGT+AGG | - | chr4.4:19829289-19829308 | MS.gene35114:CDS | 45.0% | |
CTCCACCAAGAAATAGAGCT+TGG | + | chr4.4:19828996-19829015 | None:intergenic | 45.0% | |
GCAGGCCTTTGTACATCTTT+AGG | - | chr4.4:19828583-19828602 | MS.gene35114:CDS | 45.0% | |
GTCTTGATTCAACCAGGCAA+TGG | - | chr4.4:19828934-19828953 | MS.gene35114:CDS | 45.0% | |
TGAATCCAAGCCGTGTTATG+TGG | + | chr4.4:19828496-19828515 | None:intergenic | 45.0% | |
TGGACTTGTGAGTCATGGAA+TGG | + | chr4.4:19828322-19828341 | None:intergenic | 45.0% | |
TTACTGCACGTAGTTTAGCC+AGG | + | chr4.4:19828462-19828481 | None:intergenic | 45.0% | |
TTGCACATATCACAGCTGCT+TGG | + | chr4.4:19828342-19828361 | None:intergenic | 45.0% | |
! | AACACGGCTTGGATTCAAGT+GGG | - | chr4.4:19828499-19828518 | MS.gene35114:CDS | 45.0% |
! | TAACACGGCTTGGATTCAAG+TGG | - | chr4.4:19828498-19828517 | MS.gene35114:CDS | 45.0% |
! | TTTTGGGCAATAAGAGGAGG+CGG | - | chr4.4:19828745-19828764 | MS.gene35114:CDS | 45.0% |
!!! | ACTGTCACAGTTTTTGGCAC+AGG | + | chr4.4:19828817-19828836 | None:intergenic | 45.0% |
!!! | GGTTTTGAGCAGTGGATTCA+AGG | + | chr4.4:19828252-19828271 | None:intergenic | 45.0% |
ACCGTTCATGATCCTAGACC+TGG | - | chr4.4:19828441-19828460 | MS.gene35114:CDS | 50.0% | |
CAACAACGTTGTCAACACCG+AGG | + | chr4.4:19828663-19828682 | None:intergenic | 50.0% | |
CACGTAGTTTAGCCAGGTCT+AGG | + | chr4.4:19828456-19828475 | None:intergenic | 50.0% | |
CATAGAACCGTAAGCACCTC+CGG | + | chr4.4:19828626-19828645 | None:intergenic | 50.0% | |
CCAGGGAAAACCTACATCCA+AGG | - | chr4.4:19829155-19829174 | MS.gene35114:CDS | 50.0% | |
CTGCTTGGACTTGTGAGTCA+TGG | + | chr4.4:19828327-19828346 | None:intergenic | 50.0% | |
GCAGCTTCGGAGTTATTCTC+TGG | - | chr4.4:19828773-19828792 | MS.gene35114:CDS | 50.0% | |
GCTTCGGAGTTATTCTCTGG+TGG | - | chr4.4:19828776-19828795 | MS.gene35114:CDS | 50.0% | |
TTTCCCTGGAGCAGAACTTC+TGG | + | chr4.4:19829144-19829163 | None:intergenic | 50.0% | |
! | CCTTGGATGTAGGTTTTCCC+TGG | + | chr4.4:19829158-19829177 | None:intergenic | 50.0% |
! | GCCAGGTCTAGGATCATGAA+CGG | + | chr4.4:19828445-19828464 | None:intergenic | 50.0% |
!! | CTCATTACCGGAGGTGCTTA+CGG | - | chr4.4:19828616-19828635 | MS.gene35114:CDS | 50.0% |
ACCTCCAGAAGTTCTGCTCC+AGG | - | chr4.4:19829137-19829156 | MS.gene35114:CDS | 55.0% | |
AGCGGAGGACACGACTATGA+AGG | - | chr4.4:19828391-19828410 | MS.gene35114:CDS | 55.0% | |
CCAGGAACACTACCATTGCC+TGG | + | chr4.4:19828949-19828968 | None:intergenic | 55.0% | |
CCTCCAGAAGTTCTGCTCCA+GGG | - | chr4.4:19829138-19829157 | MS.gene35114:CDS | 55.0% | |
CGTAAGCACCTCCGGTAATG+AGG | + | chr4.4:19828618-19828637 | None:intergenic | 55.0% | |
TCAGTTCATGGCTTCCCTGC+AGG | - | chr4.4:19828565-19828584 | MS.gene35114:CDS | 55.0% | |
! | CCAGGCAATGGTAGTGTTCC+TGG | - | chr4.4:19828946-19828965 | MS.gene35114:CDS | 55.0% |
!! | GGTATCGGTGGCCTCATTAC+CGG | - | chr4.4:19828604-19828623 | MS.gene35114:CDS | 55.0% |
ATCGGTGGCCTCATTACCGG+AGG | - | chr4.4:19828607-19828626 | MS.gene35114:CDS | 60.0% | |
CCCTGGAGCAGAACTTCTGG+AGG | + | chr4.4:19829141-19829160 | None:intergenic | 60.0% | |
GCAATAAGAGGAGGCGGAGG+AGG | - | chr4.4:19828751-19828770 | MS.gene35114:CDS | 60.0% | |
TGGGCAATAAGAGGAGGCGG+AGG | - | chr4.4:19828748-19828767 | MS.gene35114:CDS | 60.0% | |
GGAGGCGGAGGAGGCAGCTT+CGG | - | chr4.4:19828760-19828779 | MS.gene35114:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 19828076 | 19829671 | 19828076 | ID=MS.gene35114 |
chr4.4 | mRNA | 19828076 | 19829671 | 19828076 | ID=MS.gene35114.t1;Parent=MS.gene35114 |
chr4.4 | exon | 19828076 | 19829671 | 19828076 | ID=MS.gene35114.t1.exon1;Parent=MS.gene35114.t1 |
chr4.4 | CDS | 19828076 | 19829671 | 19828076 | ID=cds.MS.gene35114.t1;Parent=MS.gene35114.t1 |
Gene Sequence |
Protein sequence |