Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36818.t1 | XP_003627006.2 | 95.4 | 195 | 8 | 1 | 1 | 195 | 1 | 194 | 7.90E-99 | 369.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36818.t1 | G7LFY6 | 95.4 | 195 | 8 | 1 | 1 | 195 | 1 | 194 | 5.7e-99 | 369.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene36818 | 0.811545 | 6.63E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene36818 | 0.821259 | 4.44E-53 | -1.69E-46 |
| MS.gene049356 | MS.gene36818 | 0.852633 | 4.06E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene36818 | 0.832473 | 9.27E-56 | -1.69E-46 |
| MS.gene049910 | MS.gene36818 | 0.801467 | 8.88E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene36818 | 0.819092 | 1.39E-52 | -1.69E-46 |
| MS.gene050426 | MS.gene36818 | -0.830633 | 2.63E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene36818 | 0.870488 | 1.41E-66 | -1.69E-46 |
| MS.gene050971 | MS.gene36818 | 0.821894 | 3.17E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene36818 | 0.839692 | 1.36E-57 | -1.69E-46 |
| MS.gene051360 | MS.gene36818 | 0.808048 | 3.75E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene36818 | 0.845365 | 4.25E-59 | -1.69E-46 |
| MS.gene051582 | MS.gene36818 | 0.809186 | 2.14E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene36818 | 0.801818 | 7.53E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene36818 | -0.834596 | 2.74E-56 | -1.69E-46 |
| MS.gene052077 | MS.gene36818 | 0.825387 | 4.82E-54 | -1.69E-46 |
| MS.gene052134 | MS.gene36818 | 0.804388 | 2.21E-49 | -1.69E-46 |
| MS.gene052135 | MS.gene36818 | 0.831507 | 1.60E-55 | -1.69E-46 |
| MS.gene052136 | MS.gene36818 | 0.826324 | 2.89E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene36818 | 0.865674 | 4.98E-65 | -1.69E-46 |
| MS.gene052253 | MS.gene36818 | 0.873808 | 1.10E-67 | -1.69E-46 |
| MS.gene052255 | MS.gene36818 | 0.830633 | 2.63E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene36818 | 0.810029 | 1.41E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene36818 | 0.860174 | 2.48E-63 | -1.69E-46 |
| MS.gene052346 | MS.gene36818 | 0.806823 | 6.82E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene36818 | 0.847713 | 9.72E-60 | -1.69E-46 |
| MS.gene052421 | MS.gene36818 | 0.817711 | 2.86E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene36818 | 0.819074 | 1.41E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene36818 | 0.854587 | 1.11E-61 | -1.69E-46 |
| MS.gene053169 | MS.gene36818 | 0.821342 | 4.25E-53 | -1.69E-46 |
| MS.gene05316 | MS.gene36818 | 0.833007 | 6.83E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene36818 | 0.82823 | 1.01E-54 | -1.69E-46 |
| MS.gene053494 | MS.gene36818 | 0.81501 | 1.15E-51 | -1.69E-46 |
| MS.gene053758 | MS.gene36818 | 0.848075 | 7.72E-60 | -1.69E-46 |
| MS.gene053813 | MS.gene36818 | 0.80426 | 2.35E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene36818 | 0.800331 | 1.52E-48 | -1.69E-46 |
| MS.gene053928 | MS.gene36818 | 0.827941 | 1.18E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene36818 | 0.803176 | 3.95E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene36818 | 0.852673 | 3.96E-61 | -1.69E-46 |
| MS.gene054349 | MS.gene36818 | 0.855551 | 5.85E-62 | -1.69E-46 |
| MS.gene054556 | MS.gene36818 | 0.83726 | 5.77E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene36818 | 0.884178 | 2.39E-71 | -1.69E-46 |
| MS.gene055369 | MS.gene36818 | 0.852981 | 3.23E-61 | -1.69E-46 |
| MS.gene055539 | MS.gene36818 | 0.825697 | 4.07E-54 | -1.69E-46 |
| MS.gene05553 | MS.gene36818 | 0.831781 | 1.37E-55 | -1.69E-46 |
| MS.gene055604 | MS.gene36818 | 0.80075 | 1.24E-48 | -1.69E-46 |
| MS.gene055741 | MS.gene36818 | 0.824827 | 6.54E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene36818 | 0.834501 | 2.89E-56 | -1.69E-46 |
| MS.gene055909 | MS.gene36818 | 0.866659 | 2.42E-65 | -1.69E-46 |
| MS.gene055911 | MS.gene36818 | 0.871769 | 5.31E-67 | -1.69E-46 |
| MS.gene056191 | MS.gene36818 | 0.814147 | 1.79E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene36818 | 0.817677 | 2.91E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene36818 | 0.805611 | 1.23E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene36818 | 0.853407 | 2.44E-61 | -1.69E-46 |
| MS.gene056514 | MS.gene36818 | 0.833717 | 4.54E-56 | -1.69E-46 |
| MS.gene056659 | MS.gene36818 | 0.830078 | 3.60E-55 | -1.69E-46 |
| MS.gene056723 | MS.gene36818 | 0.867029 | 1.85E-65 | -1.69E-46 |
| MS.gene056876 | MS.gene36818 | 0.818138 | 2.29E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene36818 | 0.810906 | 9.13E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene36818 | 0.832908 | 7.23E-56 | -1.69E-46 |
| MS.gene057396 | MS.gene36818 | 0.883231 | 5.34E-71 | -1.69E-46 |
| MS.gene057448 | MS.gene36818 | 0.853065 | 3.06E-61 | -1.69E-46 |
| MS.gene057449 | MS.gene36818 | 0.845263 | 4.53E-59 | -1.69E-46 |
| MS.gene057450 | MS.gene36818 | 0.843604 | 1.27E-58 | -1.69E-46 |
| MS.gene057476 | MS.gene36818 | 0.817354 | 3.44E-52 | -1.69E-46 |
| MS.gene057610 | MS.gene36818 | 0.813516 | 2.46E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene36818 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene057749 | MS.gene36818 | 0.85109 | 1.11E-60 | -1.69E-46 |
| MS.gene057823 | MS.gene36818 | 0.855196 | 7.42E-62 | -1.69E-46 |
| MS.gene057825 | MS.gene36818 | 0.822634 | 2.13E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene36818 | 0.82598 | 3.49E-54 | -1.69E-46 |
| MS.gene058007 | MS.gene36818 | 0.885116 | 1.07E-71 | -1.69E-46 |
| MS.gene05811 | MS.gene36818 | 0.807936 | 3.96E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene36818 | 0.81881 | 1.61E-52 | -1.69E-46 |
| MS.gene05842 | MS.gene36818 | 0.802895 | 4.52E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene36818 | 0.803159 | 3.98E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene36818 | 0.832072 | 1.16E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene36818 | 0.856074 | 4.11E-62 | -1.69E-46 |
| MS.gene058948 | MS.gene36818 | 0.815658 | 8.26E-52 | -1.69E-46 |
| MS.gene058949 | MS.gene36818 | 0.838486 | 2.80E-57 | -1.69E-46 |
| MS.gene058995 | MS.gene36818 | 0.828719 | 7.69E-55 | -1.69E-46 |
| MS.gene059011 | MS.gene36818 | 0.82218 | 2.72E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene36818 | 0.843857 | 1.08E-58 | -1.69E-46 |
| MS.gene059080 | MS.gene36818 | 0.848357 | 6.45E-60 | -1.69E-46 |
| MS.gene059082 | MS.gene36818 | 0.861759 | 8.18E-64 | -1.69E-46 |
| MS.gene059141 | MS.gene36818 | 0.824957 | 6.09E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene36818 | 0.814376 | 1.59E-51 | -1.69E-46 |
| MS.gene059294 | MS.gene36818 | 0.820169 | 7.91E-53 | -1.69E-46 |
| MS.gene059366 | MS.gene36818 | 0.84921 | 3.74E-60 | -1.69E-46 |
| MS.gene059420 | MS.gene36818 | 0.897841 | 9.51E-77 | -1.69E-46 |
| MS.gene059462 | MS.gene36818 | 0.879696 | 1.01E-69 | -1.69E-46 |
| MS.gene059674 | MS.gene36818 | 0.841298 | 5.17E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene36818 | 0.86432 | 1.32E-64 | -1.69E-46 |
| MS.gene059692 | MS.gene36818 | 0.847815 | 9.11E-60 | -1.69E-46 |
| MS.gene059695 | MS.gene36818 | 0.851089 | 1.11E-60 | -1.69E-46 |
| MS.gene059807 | MS.gene36818 | 0.892341 | 1.74E-74 | -1.69E-46 |
| MS.gene05984 | MS.gene36818 | 0.805264 | 1.45E-49 | -1.69E-46 |
| MS.gene059876 | MS.gene36818 | 0.849372 | 3.37E-60 | -1.69E-46 |
| MS.gene059933 | MS.gene36818 | 0.848237 | 6.96E-60 | -1.69E-46 |
| MS.gene060247 | MS.gene36818 | 0.821691 | 3.53E-53 | -1.69E-46 |
| MS.gene060372 | MS.gene36818 | 0.806295 | 8.82E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene36818 | 0.84309 | 1.74E-58 | -1.69E-46 |
| MS.gene060495 | MS.gene36818 | 0.801874 | 7.33E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene36818 | 0.831699 | 1.44E-55 | -1.69E-46 |
| MS.gene060986 | MS.gene36818 | 0.840258 | 9.69E-58 | -1.69E-46 |
| MS.gene061049 | MS.gene36818 | 0.830298 | 3.18E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene36818 | -0.819685 | 1.02E-52 | -1.69E-46 |
| MS.gene061154 | MS.gene36818 | 0.858323 | 8.91E-63 | -1.69E-46 |
| MS.gene061159 | MS.gene36818 | 0.842751 | 2.14E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36818.t1 | MTR_8g013990 | 95.385 | 195 | 8 | 1 | 1 | 195 | 1 | 194 | 6.80e-137 | 380 |
| MS.gene36818.t1 | MTR_2g101140 | 66.332 | 199 | 58 | 5 | 3 | 195 | 1 | 196 | 2.37e-84 | 248 |
| MS.gene36818.t1 | MTR_8g021190 | 46.212 | 132 | 58 | 5 | 61 | 185 | 29 | 154 | 4.28e-31 | 111 |
| MS.gene36818.t1 | MTR_1g103550 | 47.778 | 90 | 39 | 3 | 62 | 148 | 2 | 86 | 3.48e-23 | 90.1 |
| MS.gene36818.t1 | MTR_3g105340 | 59.091 | 66 | 26 | 1 | 59 | 123 | 8 | 73 | 3.74e-22 | 87.4 |
| MS.gene36818.t1 | MTR_5g006430 | 43.750 | 96 | 45 | 3 | 62 | 154 | 2 | 91 | 2.34e-21 | 84.7 |
| MS.gene36818.t1 | MTR_3g109860 | 34.211 | 152 | 87 | 4 | 31 | 179 | 4 | 145 | 6.13e-19 | 79.7 |
| MS.gene36818.t1 | MTR_4g125030 | 47.222 | 72 | 37 | 1 | 53 | 123 | 13 | 84 | 1.43e-17 | 75.1 |
| MS.gene36818.t1 | MTR_4g125010 | 37.234 | 94 | 52 | 2 | 62 | 148 | 24 | 117 | 1.53e-17 | 76.3 |
| MS.gene36818.t1 | MTR_1g014930 | 40.217 | 92 | 47 | 2 | 47 | 134 | 1 | 88 | 9.84e-16 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36818.t1 | AT5G25840 | 50.543 | 184 | 54 | 5 | 35 | 195 | 4 | 173 | 2.52e-53 | 168 |
| MS.gene36818.t1 | AT1G79770 | 52.903 | 155 | 59 | 3 | 35 | 189 | 27 | 167 | 1.26e-46 | 151 |
| MS.gene36818.t1 | AT4G14819 | 42.727 | 110 | 51 | 3 | 62 | 171 | 2 | 99 | 1.70e-23 | 90.1 |
| MS.gene36818.t1 | AT2G25780 | 36.774 | 155 | 83 | 4 | 35 | 184 | 7 | 151 | 2.23e-22 | 88.6 |
| MS.gene36818.t1 | AT3G22540 | 40.449 | 89 | 50 | 1 | 62 | 150 | 2 | 87 | 2.19e-21 | 84.7 |
| MS.gene36818.t1 | AT1G72510 | 39.706 | 136 | 67 | 7 | 62 | 185 | 33 | 165 | 1.19e-20 | 84.7 |
| MS.gene36818.t1 | AT1G72510 | 39.706 | 136 | 67 | 7 | 62 | 185 | 33 | 165 | 1.19e-20 | 84.7 |
| MS.gene36818.t1 | AT1G54095 | 39.706 | 136 | 69 | 5 | 61 | 185 | 14 | 147 | 3.25e-19 | 80.5 |
| MS.gene36818.t1 | AT5G20670 | 33.582 | 134 | 82 | 3 | 59 | 185 | 19 | 152 | 4.36e-19 | 80.1 |
| MS.gene36818.t1 | AT2G09970 | 34.058 | 138 | 73 | 7 | 62 | 185 | 33 | 166 | 3.97e-16 | 72.8 |
Find 42 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAACATGGATGGGAAAATT+AGG | 0.194429 | 8.3:-74810997 | MS.gene36818:CDS |
| CGACATTTCCTTCGAGTTGA+TGG | 0.257929 | 8.3:-74811329 | MS.gene36818:CDS |
| CCTCCTCCTTTCTTGTCCCT+TGG | 0.275546 | 8.3:+74810959 | None:intergenic |
| AAAATAGATAGATAGTTAAT+TGG | 0.284549 | 8.3:+74810868 | None:intergenic |
| TGTGTTAAGTTTAACAAATA+TGG | 0.300385 | 8.3:-74811076 | MS.gene36818:CDS |
| TATATTTCTTATCATGGTTA+TGG | 0.301068 | 8.3:-74811461 | None:intergenic |
| GCTTGTGCTTGAAACAAAAC+TGG | 0.379794 | 8.3:+74811043 | None:intergenic |
| GACAAGAAAGGAGGAGGAGG+AGG | 0.400333 | 8.3:-74810953 | MS.gene36818:CDS |
| GAAAGTTTCGTTGGTTTGTT+TGG | 0.408422 | 8.3:+74811382 | None:intergenic |
| TAACATGGATGGGAAAATTA+GGG | 0.434099 | 8.3:-74810996 | MS.gene36818:CDS |
| ATTTGTGTGCGGTTTATGTT+CGG | 0.438573 | 8.3:-74811173 | MS.gene36818:CDS |
| TTGATCTCTCTTGTAAGTGC+TGG | 0.461637 | 8.3:+74810905 | None:intergenic |
| ACACTTTGCATCTTCAACTT+CGG | 0.466067 | 8.3:+74811267 | None:intergenic |
| TGTCGGAGACCGTTCTTTGA+AGG | 0.474473 | 8.3:+74811347 | None:intergenic |
| TTAAGTTTAACAAATATGGT+AGG | 0.490124 | 8.3:-74811072 | MS.gene36818:CDS |
| AGGGACAAGAAAGGAGGAGG+AGG | 0.494514 | 8.3:-74810956 | MS.gene36818:CDS |
| TGTTGTCAAGTTCATTCTCA+AGG | 0.519029 | 8.3:-74811420 | MS.gene36818:CDS |
| TTCTTTCGCCATCAACTCGA+AGG | 0.530628 | 8.3:+74811321 | None:intergenic |
| TAAGTTTAACAAATATGGTA+GGG | 0.538103 | 8.3:-74811071 | MS.gene36818:CDS |
| TCGGAAGTTGAAAGTTTCGT+TGG | 0.539469 | 8.3:+74811373 | None:intergenic |
| GGAGGCGGTGAAAGAAGAGT+TGG | 0.546775 | 8.3:-74811152 | MS.gene36818:CDS |
| GACCGTTCTTTGAAGGTGGT+CGG | 0.559329 | 8.3:+74811354 | None:intergenic |
| ATCATGGTTATGGCACCTCA+TGG | 0.562684 | 8.3:-74811451 | MS.gene36818:CDS |
| CCAAGGGACAAGAAAGGAGG+AGG | 0.566147 | 8.3:-74810959 | MS.gene36818:CDS |
| CGGAGACCGTTCTTTGAAGG+TGG | 0.567308 | 8.3:+74811350 | None:intergenic |
| GGGCTAAGTCAATTAGTCCA+AGG | 0.570684 | 8.3:-74810976 | MS.gene36818:CDS |
| ATTAGTCCAAGGGACAAGAA+AGG | 0.576487 | 8.3:-74810965 | MS.gene36818:CDS |
| ACGAACACGATCTATGTACT+CGG | 0.578833 | 8.3:+74811213 | None:intergenic |
| CGTGTTCGTAACAAGTTCGA+AGG | 0.581435 | 8.3:-74811199 | MS.gene36818:CDS |
| ACAAGAAAGGAGGAGGAGGA+GGG | 0.591395 | 8.3:-74810952 | MS.gene36818:CDS |
| GGCTAAGTCAATTAGTCCAA+GGG | 0.598516 | 8.3:-74810975 | MS.gene36818:CDS |
| TGTGTGCGGTTTATGTTCGG+AGG | 0.599984 | 8.3:-74811170 | MS.gene36818:CDS |
| TTCCGACCACCTTCAAAGAA+CGG | 0.607623 | 8.3:-74811356 | MS.gene36818:CDS |
| CATCAACTCGAAGGAAATGT+CGG | 0.632792 | 8.3:+74811330 | None:intergenic |
| TCTTCAACTTCGGATATCGA+TGG | 0.633325 | 8.3:+74811277 | None:intergenic |
| GTGTTCGTAACAAGTTCGAA+GGG | 0.639090 | 8.3:-74811198 | MS.gene36818:CDS |
| TTCGAAGGGAAATTTGTGTG+CGG | 0.644656 | 8.3:-74811184 | MS.gene36818:CDS |
| CGAACACGATCTATGTACTC+GGG | 0.649900 | 8.3:+74811214 | None:intergenic |
| GTGCGGTTTATGTTCGGAGG+CGG | 0.662587 | 8.3:-74811167 | MS.gene36818:CDS |
| GATGCAAAGTGTGAGTGTTG+TGG | 0.665594 | 8.3:-74811256 | MS.gene36818:CDS |
| AGTCCAAGGGACAAGAAAGG+AGG | 0.666513 | 8.3:-74810962 | MS.gene36818:CDS |
| GACAACAAACATTCTCCATG+AGG | 0.716500 | 8.3:+74811436 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGTTTAACAAATATGGTA+GGG | - | chr8.3:74811260-74811279 | MS.gene36818:CDS | 20.0% |
| !! | TGTGTTAAGTTTAACAAATA+TGG | - | chr8.3:74811255-74811274 | MS.gene36818:CDS | 20.0% |
| !! | TTAAGTTTAACAAATATGGT+AGG | - | chr8.3:74811259-74811278 | MS.gene36818:CDS | 20.0% |
| ! | AATGTTGAAAAAGAGTAACA+TGG | - | chr8.3:74811320-74811339 | MS.gene36818:CDS | 25.0% |
| AAAGAAGAGTTGGAGAAAAA+TGG | - | chr8.3:74811189-74811208 | MS.gene36818:CDS | 30.0% | |
| TAACATGGATGGGAAAATTA+GGG | - | chr8.3:74811335-74811354 | MS.gene36818:CDS | 30.0% | |
| TGAAAAAGAGTAACATGGAT+GGG | - | chr8.3:74811325-74811344 | MS.gene36818:CDS | 30.0% | |
| TTGAAAAAGAGTAACATGGA+TGG | - | chr8.3:74811324-74811343 | MS.gene36818:CDS | 30.0% | |
| AAGAGTTGGAGAAAAATGGT+GGG | - | chr8.3:74811193-74811212 | MS.gene36818:CDS | 35.0% | |
| ACACTTTGCATCTTCAACTT+CGG | + | chr8.3:74811067-74811086 | None:intergenic | 35.0% | |
| ATTTGTGTGCGGTTTATGTT+CGG | - | chr8.3:74811158-74811177 | MS.gene36818:CDS | 35.0% | |
| GTAACATGGATGGGAAAATT+AGG | - | chr8.3:74811334-74811353 | MS.gene36818:CDS | 35.0% | |
| TGTTGTCAAGTTCATTCTCA+AGG | - | chr8.3:74810911-74810930 | MS.gene36818:CDS | 35.0% | |
| !! | GAAAGTTTCGTTGGTTTGTT+TGG | + | chr8.3:74810952-74810971 | None:intergenic | 35.0% |
| ACGAACACGATCTATGTACT+CGG | + | chr8.3:74811121-74811140 | None:intergenic | 40.0% | |
| ATTAGTCCAAGGGACAAGAA+AGG | - | chr8.3:74811366-74811385 | MS.gene36818:CDS | 40.0% | |
| CATCAACTCGAAGGAAATGT+CGG | + | chr8.3:74811004-74811023 | None:intergenic | 40.0% | |
| GAAGAGTTGGAGAAAAATGG+TGG | - | chr8.3:74811192-74811211 | MS.gene36818:CDS | 40.0% | |
| GACAACAAACATTCTCCATG+AGG | + | chr8.3:74810898-74810917 | None:intergenic | 40.0% | |
| GCTTGTGCTTGAAACAAAAC+TGG | + | chr8.3:74811291-74811310 | None:intergenic | 40.0% | |
| GGCTAAGTCAATTAGTCCAA+GGG | - | chr8.3:74811356-74811375 | MS.gene36818:CDS | 40.0% | |
| GTGTTCGTAACAAGTTCGAA+GGG | - | chr8.3:74811133-74811152 | MS.gene36818:CDS | 40.0% | |
| TCGGAAGTTGAAAGTTTCGT+TGG | + | chr8.3:74810961-74810980 | None:intergenic | 40.0% | |
| TCTTCAACTTCGGATATCGA+TGG | + | chr8.3:74811057-74811076 | None:intergenic | 40.0% | |
| TTCGAAGGGAAATTTGTGTG+CGG | - | chr8.3:74811147-74811166 | MS.gene36818:CDS | 40.0% | |
| TTGATCTCTCTTGTAAGTGC+TGG | + | chr8.3:74811429-74811448 | None:intergenic | 40.0% | |
| CGAACACGATCTATGTACTC+GGG | + | chr8.3:74811120-74811139 | None:intergenic | 45.0% | |
| CGTGTTCGTAACAAGTTCGA+AGG | - | chr8.3:74811132-74811151 | MS.gene36818:CDS | 45.0% | |
| GGGCTAAGTCAATTAGTCCA+AGG | - | chr8.3:74811355-74811374 | MS.gene36818:CDS | 45.0% | |
| TTCCGACCACCTTCAAAGAA+CGG | - | chr8.3:74810975-74810994 | MS.gene36818:CDS | 45.0% | |
| TTCTTTCGCCATCAACTCGA+AGG | + | chr8.3:74811013-74811032 | None:intergenic | 45.0% | |
| ! | GATGCAAAGTGTGAGTGTTG+TGG | - | chr8.3:74811075-74811094 | MS.gene36818:CDS | 45.0% |
| !! | CGACATTTCCTTCGAGTTGA+TGG | - | chr8.3:74811002-74811021 | MS.gene36818:CDS | 45.0% |
| ACAAGAAAGGAGGAGGAGGA+GGG | - | chr8.3:74811379-74811398 | MS.gene36818:CDS | 50.0% | |
| AGTCCAAGGGACAAGAAAGG+AGG | - | chr8.3:74811369-74811388 | MS.gene36818:CDS | 50.0% | |
| TGTCGGAGACCGTTCTTTGA+AGG | + | chr8.3:74810987-74811006 | None:intergenic | 50.0% | |
| TGTGTGCGGTTTATGTTCGG+AGG | - | chr8.3:74811161-74811180 | MS.gene36818:CDS | 50.0% | |
| ! | GACCGTTCTTTGAAGGTGGT+CGG | + | chr8.3:74810980-74810999 | None:intergenic | 50.0% |
| AGGGACAAGAAAGGAGGAGG+AGG | - | chr8.3:74811375-74811394 | MS.gene36818:CDS | 55.0% | |
| CCAAGGGACAAGAAAGGAGG+AGG | - | chr8.3:74811372-74811391 | MS.gene36818:CDS | 55.0% | |
| CCTCCTCCTTTCTTGTCCCT+TGG | + | chr8.3:74811375-74811394 | None:intergenic | 55.0% | |
| GACAAGAAAGGAGGAGGAGG+AGG | - | chr8.3:74811378-74811397 | MS.gene36818:CDS | 55.0% | |
| GGAGGCGGTGAAAGAAGAGT+TGG | - | chr8.3:74811179-74811198 | MS.gene36818:CDS | 55.0% | |
| GTGCGGTTTATGTTCGGAGG+CGG | - | chr8.3:74811164-74811183 | MS.gene36818:CDS | 55.0% | |
| ! | CGGAGACCGTTCTTTGAAGG+TGG | + | chr8.3:74810984-74811003 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 74810883 | 74811470 | 74810883 | ID=MS.gene36818 |
| chr8.3 | mRNA | 74810883 | 74811470 | 74810883 | ID=MS.gene36818.t1;Parent=MS.gene36818 |
| chr8.3 | exon | 74810883 | 74811470 | 74810883 | ID=MS.gene36818.t1.exon1;Parent=MS.gene36818.t1 |
| chr8.3 | CDS | 74810883 | 74811470 | 74810883 | ID=cds.MS.gene36818.t1;Parent=MS.gene36818.t1 |
| Gene Sequence |
| Protein sequence |
