AlfalfaGEDB | MS.gene41739

M. sativa cultivar XinJiangDaYe / MS.gene41739

KEGG: -
GO: -
PFAM: PF03016.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41739.t1	XP_003624636.3	85	487	57	3	1	472	1	486	8.80E-237	829.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41739.t1	Q9FFN2	38.1	352	186	9	140	467	172	515	2.0e-56	221.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41739.t1	Q2HVN7	85.0	487	57	3	1	472	1	486	6.4e-237	829.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049171	MS.gene41739	-0.815326	9.79E-52	-1.69E-46
MS.gene049281	MS.gene41739	0.829511	4.94E-55	-1.69E-46
MS.gene049285	MS.gene41739	-0.806365	8.52E-50	-1.69E-46
MS.gene049320	MS.gene41739	-0.829532	4.88E-55	-1.69E-46
MS.gene05010	MS.gene41739	-0.809226	2.10E-50	-1.69E-46
MS.gene050129	MS.gene41739	0.810805	9.60E-51	-1.69E-46
MS.gene050363	MS.gene41739	0.850745	1.39E-60	-1.69E-46
MS.gene050381	MS.gene41739	0.85562	5.58E-62	-1.69E-46
MS.gene050504	MS.gene41739	-0.841475	4.65E-58	-1.69E-46
MS.gene050547	MS.gene41739	0.806021	1.01E-49	-1.69E-46
MS.gene050612	MS.gene41739	-0.823919	1.07E-53	-1.69E-46
MS.gene050699	MS.gene41739	-0.800748	1.25E-48	-1.69E-46
MS.gene05080	MS.gene41739	-0.802437	5.61E-49	-1.69E-46
MS.gene050868	MS.gene41739	-0.812566	3.98E-51	-1.69E-46
MS.gene050871	MS.gene41739	-0.813186	2.91E-51	-1.69E-46
MS.gene050883	MS.gene41739	0.882709	8.30E-71	-1.69E-46
MS.gene050986	MS.gene41739	-0.804514	2.08E-49	-1.69E-46
MS.gene051044	MS.gene41739	0.844227	8.61E-59	-1.69E-46
MS.gene05104	MS.gene41739	0.802847	4.62E-49	-1.69E-46
MS.gene051127	MS.gene41739	0.867004	1.88E-65	-1.69E-46
MS.gene05141	MS.gene41739	0.801142	1.04E-48	-1.69E-46
MS.gene051946	MS.gene41739	0.837798	4.20E-57	-1.69E-46
MS.gene053069	MS.gene41739	0.807886	4.06E-50	-1.69E-46
MS.gene053213	MS.gene41739	-0.803666	3.13E-49	-1.69E-46
MS.gene053286	MS.gene41739	-0.803833	2.89E-49	-1.69E-46
MS.gene053420	MS.gene41739	0.833496	5.16E-56	-1.69E-46
MS.gene053488	MS.gene41739	0.820972	5.17E-53	-1.69E-46
MS.gene053549	MS.gene41739	0.822262	2.60E-53	-1.69E-46
MS.gene053561	MS.gene41739	0.865766	4.65E-65	-1.69E-46
MS.gene053826	MS.gene41739	0.818178	2.24E-52	-1.69E-46
MS.gene054595	MS.gene41739	-0.821655	3.60E-53	-1.69E-46
MS.gene054642	MS.gene41739	-0.802778	4.77E-49	-1.69E-46
MS.gene054708	MS.gene41739	0.863878	1.82E-64	-1.69E-46
MS.gene05470	MS.gene41739	-0.803742	3.01E-49	-1.69E-46
MS.gene054954	MS.gene41739	-0.807981	3.88E-50	-1.69E-46
MS.gene054959	MS.gene41739	0.831352	1.75E-55	-1.69E-46
MS.gene055124	MS.gene41739	0.833271	5.87E-56	-1.69E-46
MS.gene055154	MS.gene41739	0.857553	1.51E-62	-1.69E-46
MS.gene055362	MS.gene41739	-0.824709	6.97E-54	-1.69E-46
MS.gene055502	MS.gene41739	-0.829722	4.39E-55	-1.69E-46
MS.gene055549	MS.gene41739	0.802672	5.02E-49	-1.69E-46
MS.gene055550	MS.gene41739	0.806448	8.19E-50	-1.69E-46
MS.gene055750	MS.gene41739	-0.800933	1.14E-48	-1.69E-46
MS.gene05589	MS.gene41739	-0.805988	1.02E-49	-1.69E-46
MS.gene055942	MS.gene41739	0.817462	3.26E-52	-1.69E-46
MS.gene056310	MS.gene41739	0.817007	4.12E-52	-1.69E-46
MS.gene056311	MS.gene41739	0.838595	2.62E-57	-1.69E-46
MS.gene056313	MS.gene41739	0.838184	3.34E-57	-1.69E-46
MS.gene056408	MS.gene41739	0.830049	3.65E-55	-1.69E-46
MS.gene056504	MS.gene41739	-0.814247	1.70E-51	-1.69E-46
MS.gene056657	MS.gene41739	-0.806076	9.80E-50	-1.69E-46
MS.gene057014	MS.gene41739	0.831314	1.79E-55	-1.69E-46
MS.gene058099	MS.gene41739	0.814067	1.86E-51	-1.69E-46
MS.gene058109	MS.gene41739	0.80314	4.02E-49	-1.69E-46
MS.gene058171	MS.gene41739	0.810123	1.35E-50	-1.69E-46
MS.gene058173	MS.gene41739	0.802755	4.83E-49	-1.69E-46
MS.gene058175	MS.gene41739	0.810177	1.31E-50	-1.69E-46
MS.gene05837	MS.gene41739	-0.833675	4.65E-56	-1.69E-46
MS.gene058419	MS.gene41739	-0.81126	7.65E-51	-1.69E-46
MS.gene058544	MS.gene41739	-0.816077	6.66E-52	-1.69E-46
MS.gene058628	MS.gene41739	0.835927	1.26E-56	-1.69E-46
MS.gene058629	MS.gene41739	0.849559	2.99E-60	-1.69E-46
MS.gene058630	MS.gene41739	0.840532	8.21E-58	-1.69E-46
MS.gene058691	MS.gene41739	0.81211	5.00E-51	-1.69E-46
MS.gene058840	MS.gene41739	0.807986	3.87E-50	-1.69E-46
MS.gene059022	MS.gene41739	-0.836945	6.95E-57	-1.69E-46
MS.gene059223	MS.gene41739	0.810646	1.04E-50	-1.69E-46
MS.gene059677	MS.gene41739	-0.800915	1.15E-48	-1.69E-46
MS.gene059690	MS.gene41739	0.802543	5.34E-49	-1.69E-46
MS.gene059691	MS.gene41739	0.813866	2.06E-51	-1.69E-46
MS.gene059694	MS.gene41739	0.818439	1.96E-52	-1.69E-46
MS.gene059697	MS.gene41739	0.826395	2.78E-54	-1.69E-46
MS.gene059718	MS.gene41739	-0.805617	1.22E-49	-1.69E-46
MS.gene059865	MS.gene41739	-0.812939	3.29E-51	-1.69E-46
MS.gene059916	MS.gene41739	0.82572	4.02E-54	-1.69E-46
MS.gene06077	MS.gene41739	-0.841176	5.57E-58	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41739.t1	MTR_7g085840	93.373	332	9	1	154	472	1	332	0.0	645
MS.gene41739.t1	MTR_5g031480	42.466	365	180	9	119	465	61	413	1.03e-92	287
MS.gene41739.t1	MTR_5g049790	41.979	374	181	10	105	465	83	433	8.81e-90	280
MS.gene41739.t1	MTR_7g103260	39.193	347	179	10	140	462	54	392	1.54e-69	227
MS.gene41739.t1	MTR_7g103270	37.255	357	182	9	140	467	55	398	5.67e-66	218
MS.gene41739.t1	MTR_1g061760	37.243	341	181	9	147	462	147	479	6.19e-62	209
MS.gene41739.t1	MTR_3g097310	34.908	381	207	10	114	467	125	491	5.52e-61	207
MS.gene41739.t1	MTR_7g103150	36.415	357	176	12	140	462	141	480	7.64e-61	206
MS.gene41739.t1	MTR_3g106690	37.429	350	182	11	147	468	52	392	8.69e-60	201
MS.gene41739.t1	MTR_3g110198	36.975	357	174	14	140	462	250	589	4.99e-59	204
MS.gene41739.t1	MTR_4g100730	34.270	356	191	10	140	462	186	531	3.45e-58	201
MS.gene41739.t1	MTR_1g090733	36.467	351	184	12	140	464	208	545	4.28e-57	198
MS.gene41739.t1	MTR_1g006600	35.475	358	178	13	140	462	243	582	1.26e-56	197
MS.gene41739.t1	MTR_5g031480	39.146	281	142	8	119	381	61	330	3.83e-56	190
MS.gene41739.t1	MTR_4g115540	34.840	376	191	11	122	462	263	619	5.83e-56	196
MS.gene41739.t1	MTR_5g031480	38.929	280	142	8	119	380	61	329	1.71e-55	188
MS.gene41739.t1	MTR_3g080690	33.780	373	197	11	128	467	89	444	2.11e-55	191
MS.gene41739.t1	MTR_8g102840	35.674	356	181	12	140	462	265	605	3.22e-55	194
MS.gene41739.t1	MTR_3g110200	34.819	359	179	11	140	462	247	586	7.97e-55	193
MS.gene41739.t1	MTR_3g081240	33.159	383	224	10	109	467	72	446	1.83e-54	189
MS.gene41739.t1	MTR_4g115530	33.333	381	200	13	117	462	24	385	1.21e-53	185
MS.gene41739.t1	MTR_4g115530	34.012	344	179	12	154	462	1	331	6.83e-51	176
MS.gene41739.t1	MTR_4g115460	32.603	365	196	11	140	469	115	464	6.66e-50	177
MS.gene41739.t1	MTR_5g049790	38.735	253	129	8	105	343	83	323	1.49e-45	161
MS.gene41739.t1	MTR_5g049790	39.749	239	118	8	119	343	114	340	1.38e-44	159
MS.gene41739.t1	MTR_5g081290	27.103	321	155	12	154	465	1	251	9.91e-30	117
MS.gene41739.t1	MTR_4g115540	31.959	291	145	10	122	377	263	535	8.30e-29	119
MS.gene41739.t1	MTR_8g102840	32.593	270	135	11	140	376	265	520	2.95e-27	115
MS.gene41739.t1	MTR_2g084245	27.215	316	183	10	186	458	115	426	9.95e-24	103
MS.gene41739.t1	MTR_4g057500	26.498	317	184	12	186	458	133	444	3.78e-21	96.3
MS.gene41739.t1	MTR_8g096160	25.161	310	193	9	186	458	77	384	1.65e-20	94.0
MS.gene41739.t1	MTR_8g096140	24.839	310	194	9	186	458	77	384	2.45e-19	90.5
MS.gene41739.t1	MTR_3g037720	24.242	297	184	10	203	465	188	477	3.17e-14	75.1
MS.gene41739.t1	MTR_7g087100	25.172	290	165	11	204	454	190	466	6.65e-14	74.3
MS.gene41739.t1	MTR_4g077920	26.644	289	161	13	194	444	171	446	8.96e-14	73.6
MS.gene41739.t1	MTR_4g077920	26.829	287	159	13	196	444	173	446	9.56e-14	73.6
MS.gene41739.t1	MTR_4g077920	27.273	242	135	10	231	444	160	388	1.71e-13	72.8
MS.gene41739.t1	MTR_1g029350	24.496	347	206	11	157	458	73	408	2.26e-13	72.4
MS.gene41739.t1	MTR_6g027310	25.503	298	166	11	198	454	179	461	5.84e-13	71.2
MS.gene41739.t1	MTR_4g084200	22.464	276	173	8	205	444	163	433	7.50e-13	70.9
MS.gene41739.t1	MTR_4g084200	22.619	252	155	7	205	420	163	410	4.48e-11	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41739.t1	AT4G38040	45.029	342	164	7	138	461	84	419	6.84e-94	291
MS.gene41739.t1	AT4G38040	42.947	319	156	8	138	437	84	395	3.02e-76	244
MS.gene41739.t1	AT4G16745	35.516	397	205	13	101	459	141	524	8.18e-66	221
MS.gene41739.t1	AT5G03795	38.592	355	180	10	137	467	175	515	4.67e-63	213
MS.gene41739.t1	AT5G37000	38.068	352	177	11	140	462	208	547	2.86e-62	212
MS.gene41739.t1	AT4G16745	35.476	389	200	13	101	451	141	516	1.36e-60	208
MS.gene41739.t1	AT5G11610	36.752	351	183	14	140	462	202	541	3.17e-57	198
MS.gene41739.t1	AT4G32790	36.585	369	173	15	136	462	240	589	2.13e-56	197
MS.gene41739.t1	AT4G32790	36.585	369	173	15	136	462	240	589	2.13e-56	197
MS.gene41739.t1	AT4G32790	36.585	369	173	15	136	462	240	589	2.13e-56	197
MS.gene41739.t1	AT5G11130	34.417	369	190	11	137	470	128	479	4.08e-56	194
MS.gene41739.t1	AT5G19670	34.540	359	181	12	140	462	263	603	3.97e-55	194
MS.gene41739.t1	AT5G19670	34.540	359	181	12	140	462	263	603	3.97e-55	194
MS.gene41739.t1	AT5G11130	34.659	352	178	11	154	470	1	335	3.03e-54	185
MS.gene41739.t1	AT5G20260	34.066	364	203	12	127	462	106	460	4.88e-54	188
MS.gene41739.t1	AT5G25820	34.454	357	186	12	140	462	306	648	3.24e-53	189
MS.gene41739.t1	AT5G25310	33.516	364	197	9	137	468	130	480	4.51e-53	186
MS.gene41739.t1	AT5G20260	34.897	341	185	12	153	465	27	358	5.72e-53	182
MS.gene41739.t1	AT5G20260	35.015	337	182	12	154	462	1	328	2.01e-52	180
MS.gene41739.t1	AT3G42180	32.970	367	201	11	131	465	113	466	2.08e-51	181
MS.gene41739.t1	AT3G07620	33.151	365	209	10	130	468	104	459	2.15e-51	181
MS.gene41739.t1	AT3G42180	33.430	344	190	9	154	465	1	337	7.75e-51	176
MS.gene41739.t1	AT5G33290	31.831	355	207	10	138	462	144	493	1.15e-47	172
MS.gene41739.t1	AT5G11610	32.685	257	136	12	140	369	202	448	9.67e-25	107
MS.gene41739.t1	AT2G28110	25.392	319	187	10	186	458	120	433	2.43e-20	93.6
MS.gene41739.t1	AT5G22940	26.415	318	185	13	186	459	136	448	3.63e-20	93.2
MS.gene41739.t1	AT5G22940	26.415	318	185	13	186	459	165	477	4.37e-20	93.2
MS.gene41739.t1	AT1G27440	24.920	313	190	10	186	458	73	380	5.77e-19	89.4
MS.gene41739.t1	AT5G11610	38.462	130	58	5	140	251	202	327	2.46e-16	80.5
MS.gene41739.t1	AT3G03650	23.558	416	245	17	108	459	69	475	6.37e-15	77.4
MS.gene41739.t1	AT5G44930	25.843	267	161	10	205	441	129	388	1.75e-12	69.7
MS.gene41739.t1	AT5G44930	25.843	267	161	10	205	441	129	388	1.75e-12	69.7
MS.gene41739.t1	AT1G74680	26.642	274	150	11	187	420	133	395	2.26e-12	69.3
MS.gene41739.t1	AT3G45400	25.352	284	170	12	205	454	157	432	1.50e-11	66.6

Find 92 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGACGGTTCAGGAAAATTTA+AGG	0.187479	7.2:-21995326	MS.gene41739:CDS
GGAGAAGGAAGAATGAATTT+TGG	0.206250	7.2:+22003150	None:intergenic
ATATGGTTATGTATGAATTA+TGG	0.236996	7.2:-21994016	MS.gene41739:CDS
AAGTTCTATACCTATTGTTT+TGG	0.284491	7.2:-21993985	MS.gene41739:CDS
TGACTTTGATGCATTCTATA+TGG	0.287970	7.2:-21994033	MS.gene41739:CDS
TTCCAATTGGGTCATGGCCT+TGG	0.288004	7.2:-22003063	MS.gene41739:CDS
ATGCATGCCTACCACAAATT+TGG	0.291197	7.2:-21994811	MS.gene41739:CDS
CGTAGACTTGCTATGGAAAA+AGG	0.292417	7.2:+21995067	None:intergenic
CCAACCTTGTTTCATCAAAT+AGG	0.304692	7.2:-21994769	MS.gene41739:intron
ATTGGTGATTCATTATACTA+TGG	0.326408	7.2:-21994263	MS.gene41739:CDS
CATACCCTTTGAGCTGGATT+GGG	0.333824	7.2:+22003014	None:intergenic
CAAGTCTCATACTTTCCAAT+TGG	0.342232	7.2:-22003076	MS.gene41739:CDS
ATAGAAGAGAATGGAAAATA+TGG	0.344052	7.2:+22003251	None:intergenic
GCATACCCTTTGAGCTGGAT+TGG	0.354741	7.2:+22003013	None:intergenic
CTGAAAGGTATAGTTAGTTC+TGG	0.366270	7.2:-21994125	MS.gene41739:CDS
CCATACGGTGATGAGTTATT+AGG	0.385062	7.2:-21994335	MS.gene41739:CDS
AAGTGGTTATATTGCTCATA+AGG	0.385596	7.2:-21994834	MS.gene41739:CDS
GGCAAACCCCGTTGACTTTG+TGG	0.400455	7.2:+22003039	None:intergenic
ATGATTGTTGTGTAAGGTAT+TGG	0.414772	7.2:+22003113	None:intergenic
CCTTGGACCACAAAGTCAAC+GGG	0.437971	7.2:-22003046	MS.gene41739:CDS
GTTAAGAGAGCTAAGGTAGT+TGG	0.438077	7.2:+22003273	None:intergenic
TATGTGGCATGTCATTCAAT+TGG	0.444024	7.2:-21994932	MS.gene41739:CDS
TCATCAAGTTATTTCTTAAG+TGG	0.445359	7.2:-21994851	MS.gene41739:CDS
AGAAGAATGTGTTGAAGGTA+AGG	0.445791	7.2:-21994085	MS.gene41739:CDS
TAATAGTTGGCAATGATCAC+TGG	0.452560	7.2:+21994233	None:intergenic
AAGTCTCATACTTTCCAATT+GGG	0.455013	7.2:-22003075	MS.gene41739:CDS
TTTCTTGAAGTAACTTTCAC+TGG	0.456582	7.2:+21995150	None:intergenic
ATAGTAAGCATAGAAGAGAA+TGG	0.460134	7.2:+22003242	None:intergenic
AGTATGAGAGTATTGGTAAA+GGG	0.464059	7.2:+22003335	None:intergenic
GTCCAAGGCCATGACCCAAT+TGG	0.469081	7.2:+22003061	None:intergenic
CTAGAAACATATCTCTATCA+TGG	0.469141	7.2:+21995287	None:intergenic
GTTAAGTGAGGGGTTGGAGA+AGG	0.469191	7.2:+22003135	None:intergenic
TGTAAGGTATTGGTTAAGTG+AGG	0.473954	7.2:+22003123	None:intergenic
AAAAGGAAGGTCATAATAGT+TGG	0.482102	7.2:+21994220	None:intergenic
ATGGCATTGAATTTCACATC+AGG	0.483309	7.2:+21994887	None:intergenic
TTCACTGGCATAATTGCCAC+CGG	0.483530	7.2:+21995165	None:intergenic
TGATGAACAAACAACTTGAA+TGG	0.484985	7.2:+21994868	None:intergenic
CCACCCCAATCCAGCTCAAA+GGG	0.486308	7.2:-22003018	MS.gene41739:intron
CCCGTTGACTTTGTGGTCCA+AGG	0.486935	7.2:+22003046	None:intergenic
CTATTTGATGAAACAAGGTT+GGG	0.490527	7.2:+21994770	None:intergenic
CAACATGAGTATGAGAGTAT+TGG	0.492668	7.2:+22003328	None:intergenic
TGATTCACAAGTATCCGTAT+TGG	0.495104	7.2:-21994982	MS.gene41739:CDS
AGAGTGGATTGGTGGTTATG+TGG	0.497762	7.2:+22003192	None:intergenic
CCTATTTGATGAAACAAGGT+TGG	0.500790	7.2:+21994769	None:intergenic
CCACCGGTGCGGTTCCAATA+CGG	0.501589	7.2:+21994968	None:intergenic
GTATTGGTTAAGTGAGGGGT+TGG	0.505320	7.2:+22003129	None:intergenic
CATACTTTCCAATTGGGTCA+TGG	0.508311	7.2:-22003069	MS.gene41739:CDS
CAATTCAAAATATCTGCAAA+AGG	0.508336	7.2:+21994203	None:intergenic
ATCATGCCGTAGACTTGCTA+TGG	0.511496	7.2:+21995060	None:intergenic
GTAAGGTATTGGTTAAGTGA+GGG	0.513043	7.2:+22003124	None:intergenic
TGAAGTTAAGAGTGGATTGG+TGG	0.513765	7.2:+22003184	None:intergenic
TGATGATTTGAAGTTAAGAG+TGG	0.517478	7.2:+22003176	None:intergenic
GAGTATTGGTAAAGGGAAGA+AGG	0.517846	7.2:+22003342	None:intergenic
TCGACAAGATTTATCCGTAC+TGG	0.518253	7.2:+21994410	None:intergenic
GAGTATGAGAGTATTGGTAA+AGG	0.519981	7.2:+22003334	None:intergenic
GGTAATAGCACATTTGCAAA+AGG	0.529147	7.2:+21995202	None:intergenic
TTCAATTGGAAGGTCTGCTA+TGG	0.532886	7.2:-21994918	MS.gene41739:CDS
GCCTTGGACCACAAAGTCAA+CGG	0.533654	7.2:-22003047	MS.gene41739:CDS
GAAGTGAACACAGCACGTAT+TGG	0.536936	7.2:-21994281	MS.gene41739:CDS
GAAGAATGTGTTGAAGGTAA+GGG	0.537595	7.2:-21994084	MS.gene41739:CDS
ATTTGAAGTTAAGAGTGGAT+TGG	0.541977	7.2:+22003181	None:intergenic
TTCTTGGCCAAATTTGTGGT+AGG	0.544146	7.2:+21994804	None:intergenic
ATAAAAGTGATCCGCGCCAC+CGG	0.547434	7.2:+21994952	None:intergenic
ATCAGAATGATTGTTGTGTA+AGG	0.547521	7.2:+22003107	None:intergenic
GAGAAGTGAATTCGCCAGTA+CGG	0.551348	7.2:-21994424	MS.gene41739:CDS
GCTACAGAAGAATGTGTTGA+AGG	0.551649	7.2:-21994090	MS.gene41739:CDS
CCTAATAACTCATCACCGTA+TGG	0.554944	7.2:+21994335	None:intergenic
GGATAAATCTTGTCGAGACA+TGG	0.555807	7.2:-21994403	MS.gene41739:CDS
GCCACCCCAATCCAGCTCAA+AGG	0.556511	7.2:-22003019	MS.gene41739:CDS
TTGGAACCGCACCGGTGGCG+CGG	0.557524	7.2:-21994963	MS.gene41739:CDS
TCAAAATATCTGCAAAAGGA+AGG	0.557935	7.2:+21994207	None:intergenic
TTTGATGAAACAAGGTTGGG+TGG	0.562781	7.2:+21994773	None:intergenic
TACTGGCGAATTCACTTCTC+CGG	0.566201	7.2:+21994427	None:intergenic
CCCTTTGAGCTGGATTGGGG+TGG	0.566358	7.2:+22003018	None:intergenic
ATACCCTTTGAGCTGGATTG+GGG	0.576758	7.2:+22003015	None:intergenic
ACAGAAATCTTTGTTCACAA+TGG	0.577531	7.2:-21994371	MS.gene41739:CDS
AAATATGGTTAAGAGAGCTA+AGG	0.581380	7.2:+22003266	None:intergenic
CCGTATTGGAACCGCACCGG+TGG	0.597029	7.2:-21994968	MS.gene41739:CDS
TGGCATGTCATTCAATTGGA+AGG	0.599398	7.2:-21994928	MS.gene41739:CDS
GGTACCTATTTGATGAAACA+AGG	0.607743	7.2:+21994765	None:intergenic
TATCCGTATTGGAACCGCAC+CGG	0.608918	7.2:-21994971	MS.gene41739:CDS
TAGAATGCATCAAAGTCAAG+TGG	0.609625	7.2:+21994038	None:intergenic
TAAGGTATTGGTTAAGTGAG+GGG	0.610496	7.2:+22003125	None:intergenic
AAGGGAAGAAGGACGAAGCA+TGG	0.619694	7.2:+22003353	None:intergenic
AGTGATCCGCGCCACCGGTG+CGG	0.629143	7.2:+21994957	None:intergenic
ATTGGTGGTTATGTGGACGA+TGG	0.634173	7.2:+22003199	None:intergenic
AATGCATCAAAGTCAAGTGG+AGG	0.658492	7.2:+21994041	None:intergenic
TTACCCGTGAAAACTGAACC+CGG	0.660789	7.2:-21995184	MS.gene41739:CDS
TCACTGGCATAATTGCCACC+GGG	0.685601	7.2:+21995166	None:intergenic
CTTGGACCACAAAGTCAACG+GGG	0.749981	7.2:-22003045	MS.gene41739:CDS
ATGGTGTGTGAAGATGATTG+AGG	0.755003	7.2:+22003218	None:intergenic
CCCGTGAAAACTGAACCCGG+TGG	0.789625	7.2:-21995181	MS.gene41739:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr7.2	gene	21993974	22003373	21993974	ID=MS.gene41739
chr7.2	mRNA	21993974	22003373	21993974	ID=MS.gene41739.t1;Parent=MS.gene41739
chr7.2	exon	22003019	22003373	22003019	ID=MS.gene41739.t1.exon1;Parent=MS.gene41739.t1
chr7.2	CDS	22003019	22003373	22003019	ID=cds.MS.gene41739.t1;Parent=MS.gene41739.t1
chr7.2	exon	21995059	21995376	21995059	ID=MS.gene41739.t1.exon2;Parent=MS.gene41739.t1
chr7.2	CDS	21995059	21995376	21995059	ID=cds.MS.gene41739.t1;Parent=MS.gene41739.t1
chr7.2	exon	21994770	21995019	21994770	ID=MS.gene41739.t1.exon3;Parent=MS.gene41739.t1
chr7.2	CDS	21994770	21995019	21994770	ID=cds.MS.gene41739.t1;Parent=MS.gene41739.t1
chr7.2	exon	21993974	21994469	21993974	ID=MS.gene41739.t1.exon4;Parent=MS.gene41739.t1
chr7.2	CDS	21993974	21994469	21993974	ID=cds.MS.gene41739.t1;Parent=MS.gene41739.t1

Gene Sequence

>MS.gene41739

ATGCTTCGTCCTTCTTCCCTTTACCAATACTCTCATACTCATGTTGCAAGTTCATTCAAGAGCTTTTTCTTCTTCATTCCAACTACCTTAGCTCTCTTAACCATATTTTCCATTCTCTTCTATGCTTACTATACCTCAATCATCTTCACACACCATCGTCCACATAACCACCAATCCACTCTTAACTTCAAATCATCATCTCCAAAATTCATTCTTCCTTCTCCAACCCCTCACTTAACCAATACCTTACACAACAATCATTCTGATCAGTTCATCAAGTCTCATACTTTCCAATTGGGTCATGGCCTTGGACCACAAAGTCAACGGGGTTTGCCACCCCAATCCAGCTCAAAGGGTATGCAAAATGTTTCAATATTTTTTTTTAATATTGTTGTTTGTTAATATGGTTTGTGTGGTATAATTTTTTTATTTGAGTTTGACTTTGTCAAAATAAATACTATATATCATATTATCATTCATTTTAAGGTGGCTTTTGTTGGAAGAAGTAGAAACTTGTTTATTATTCAAAGTTTAAGTCTTTCACGTCTCTTGATCCATGAGATCATTTTTACAACCATGGCATGCTGTTGTTGAACCTTGGAAATTGTTTAACTAATGCATGATATTGTGTAATGTATTCTATGTAGATGTAGATGTAGATAACTCGTACTCTTTCTCAATAAGACAAACATAATTATGTGGACCTTTCTCTATTTTTGGAAATGTTGTGGACATTATTTGCTTGCTGTAAATGCATATTGTTATATACGACAATGAACACGTTACATAACACATGTAATTTGTAGTTTACTTTTAAATATGTGTAATTGAGATGAAGCTGGCATTAGGGCATGAAATTCGAACCTTCCATCAAAATAGAAAGTTTCAAAAGATTGTGTATCAGTAACTGACGCAATCTATCTATAAGGACTGATTAATTAAGAATGTACTGCCATTTTAGTTTGCAATATTGTATATTTTCTTTTTTCTGGTAGAAAAAGAGGGCCAAAGCCCTGCATTATTTTATTCTAATATTCCTAGATTGGTAAATGGCTCACGCTTTTGGCACCCTATAAGAAATGGTTGTAGACTAAAATAAAACATGGTAGAAATTAGGGATGTCAATTTTATACAAACTCATAATGTGTTGTTTTTGGATTTCCAAACTGTTAAATTTGAATCTCCAAATTCTATCATCTACCGAAGTTGTTACTAGGTTGAGTCACGACCAGGTCGCTCTCTTTAAGACGTTTCGTGGCACTACCCAAAGTTGTGCAAGGTAGACTATCAACCACGCCGCCTCCAGGATAAAACAAGCCCAGCTACAACTGTTCGATTAACTACTGCACTGTAGATAAATCGTTCGAGAATTACACCCTCAAAATATGGCTCAATCGTTTGATCGAAGCCACTCGATACGGTACGTAACCGCTCTATTCGAAACCGTTCAAATTAATATGGTATTATTACCATTCTATTATGGTGCTGAGACCACTCAAATATGGTGTTACCACCATTCTAACTTCTCCAAAACATGAATATGGCACTACGACCACTCAAATATGGTGATACCACCATTTCTCCTTAAAATTATTAAAATAATATATATACTGTTAAGATCATTCTTTAATATGATCTTAATAGCACTCTATATTCCGAAGAATCATATATTATCGAAGGGAATATGAACCTAAGACCAAGGGACTATGGTCTTAAGAACACTCTTAATACCGAAGGGACAGAAAGGAGTAGAAGAAGAAGAACGATTTGTTAAAATCGAAAGGGAGAAGAGAGAAAACCGCACAGGAAGCATCAACTGTGAGATTTTTGGTGTGAAGAATGAGTGGGGCGAGCTCTCCTTTTATAGGCAGAGTTACTTGGGGATTAAGTTTGCTTAATCCTTAAGCAAACGCGTTTTACGCGTGACTTGGGGATTAAGTTTGCTTAATCCTCAAGCAAACATGTTTTCTTAATTGGAAATATCCGGAAGCTTCTGGATACGGGTTTGGATCGGGTCGGAATGTAACACATCAATTTGTTACGCGTAACACTTTCGTATAATGAAAAATTAATTAATTAATTAATTAATTTAACATTTTAAAGTGACAAAAAAATATATATCAATTTTTTTAAGCGTTCACCCGTTCACAAAATTGGGTACCCCAAGGGCACACCCTTAGAGGTCACTTTTCCCGTATATAAACACTTACTAGTTGGGGTGACCCTTCAATGTGGGACATTTTTAAGTCACACCCACACACTAGTTTTTTTCATAGTGTTTTTCTTTCCAATTTTCTTCACTAGAATTAACTAGTGTTCCAACAATCCCCCACTTGACTTCAAAATGGTTTCGAGAAATAACGTAAAACGTTTCCATAAGATTTGCTAATATACAAAGGTGTCGCCAACAACTTGAACCTTTGCATAGTGGAAGGTATTCTGATTTAACAAGAGTTGCTTACAGCATTGAACTCTATCTCAGACATAGAATCCACACACAAACCTTTTCATAGGTGTATTCTAAAAGCCCGTGCGTTTTAAGGCCCTGCACGTGTATCCCGGTTTTAACGAATGCTCTAGGAATTCTGCCTCGAAATTCCATAGGATCGGCCTAAGTTCCACATTCGTATAGGTGAGTCTATCAAGAGTACTCCTGTAGCTGTGTACCCCACTCAACATAGAGTATAGATCTCATTAAGAGTTACTATTACCTCATCCTTCTTTCGCTGCAGGATCATGCTTTCTATATTCTTTATCTCATAGCATGTTCTACCACATCATGACTTGTTTTTACCCATTGAACCTATTTCTTGGGATCTCCAGTCATTTAGGTCGGGTTACCATCACTTGTGGGCTATAGGCATTAGTCCCATCCTACTGGATGTTTCTTGGACTTTCTCTCTATTAAGTCCTTTCGTCAAAGGATCAGCTAAGTTTTCATTCGTACGTACAAAATCAACTCTAACCGCTCCATTTAGAGATACACTCTCTAATCGTGCTATGTTTTCGCCTTATCTGTCGTCTCTTACCATTGTAATAACGATTCTTAATCTTTGCAATAGCCGCGGTACTATCGCAATGAATTAACATAGCTGGTAACGGTTTCTCCCATAAAGGGATTTCAGCTAGCAAGGATCTTAGCCAACTTGCTTCTTCACTAGTTTTCTCTAGTGTTCTCATCTCAGATTCATTCCATAGTGGACTGAGTCAATATCATTTGTTTTAACAAACAACTCCTCTAGTGATGCTCAATGTGCAAACACTAGTCGCTAAATATTCATCTGAAAGATGTTCTATTTTATATCTTGTACCATTTAAGTACAATATGTTACTCCTAGTGAAGTAATCTTAGAGTCATAGTCTTCTCATGACTCTTTCTATAGCATGGCAATTCTTTCCATCCGTCTACTAGTAAACTTGCACAAGAGTTTCACGACATCGACAATGTCGGATCTAATACATTCAGTGGCATAGCTAAGTGCTGCCAATGATGCTCGTATATTCTTTTTTCTAGCTCCATCTCAAGTGTTCTTACACTTGGATCATAATATGTGATTGCAAGTTTACGGTGAAATAATTACATTTCTTTAAGATCTTCTCAACTTTGTGAGATTTATCAAAAAAGTTATCTTTTCTGATCTAGTAATCTTGAAACCAAGAATTACTTCAATTTTTTTTTTGTTTAGGTCTTTCTTATCAATGTTGTTGATAAACAATGATTTCACATAATTCATAACATGAATCTTTAAATCAAATATGAGCAAGTCGTCTTCATAGAGACATATGATCGTGCAAATATTATTTGTCACTTTCATTCACTTTATACTCATTCGATAACATTAGAATGTCAAATTTTTCATGCCATTCCTCAGGAGTTTATTTTAGACCATTCAAATAATTATCTAACTTACAGACCTTGTTTTCTTGTCCATGAATTGCAAAATTTTTCAGGTTGTTTCATATAGACTTGTTCTTCTAGTTCACCATAAAAAGGCAACTTTCACATCCATTTGGAGTACTATCGAGTTATAAACGGCGGCTAAAGGGACTAGTACTCTTATGGATATGATTTTCGTGACTGGTGAATGAATGTCGAAGAAGTCTATATTTTTCTCTTTGTCTAAAACCTTTGACTACAAGGAAAGCCTTGTATTCATCAACCGTACCATCAGGTTTTAGTTCCTTTTTTTTTTTTTTTTTCAAAAATCCAAATACAACCGATTGGTTTTGCAACTATGAGACAAGTCAACTAAGTTTCATGTTTTGTTAGACTCTAGAAAATCCATTTCATCGTTTATTGTTTCTTGCCATAATTCAGCATCCATTAAGGATATAGCTTTTTAAGGCTTAATGGATCTTCTTCCATTGTATAAACCAAGTTCATACTCTTTAGCAATTTTAGCTTTCTTACCTCCTTGAGGTTCTATAACATCTCGTACGATGTTTTCATAACTGTTTCATAACTATTTCTGATAACATGAATGTGATCAGATTTATTGCCCCCACTAGTTCTTAATTTTTAAAAGGGAAATTTAATTTGCCCCTACTAATGTCGTGCTCCCATTAGAGCCCCCACTAGTGCCCCCACTATTCTTTAGTTAAAGGGGTATATATTTACATAGAATTCGACATCTTTTAAATTCTATGATCACTTTAACATTTAGGTCATAAAACCTATATGTTTCGTTATTTATCGCATACCTGATGAATACATATTTATAGGCTCTACTAGTGAGTTCAACTCTCTTGGGGTCCAGGATCTAAATATAGTCCAGACAATCCCAAGTTCAAAAAATAAGACAAGTTGGATTGTCTTTTCTTCAAAAATTTCTTAATTAGAATTTTTGTTCTTAGACTTGGGAACTCTATAAATTTCAATTTTCGTTATAAAAATTGAACATTCAAGCACATCAATTTTATTTTCCAAAATTCACAGTCATCAATAAATATGATAAAAATATCATTTTATCATTTCTAATTTATGTGTCATCAAATTAACACATATCATAATTTATTATGTTTAGAGATTCAATTCTCTAAATTCTGATTTATATGAACTTTTGGTTCATATATCTTGACTGCAATAAATAAAATTGTTTAATTATATAACTTTGGAATTAAGTCCAAGTTACTCAAGTTTAAAATTAAACACTTGTTCGTGATCAATTTTGATATGTCAAATATTTAAAATCACACAACTAATAACATAGAAGGAGAATTTAATTTTTAACATACCATCAAAGTGCAATCTTTTTCCACAAGAGTGCATGGTACACAAGTCTCTCTTTAAGTCTGAGTCAACTCAGTCTTATTCAATAGAAATCTGAAATTCAGATTTCTTAAACATAAATAGAATTTCACAATTCCATTTATTTTCCTTATTGCATATTTACAAGTTTGGATTATGTAAAACGATCGATGCATATGTTTATCAATTCTTGTTAAAGATTTGAAAACCAGTACGTGATATCAATGTTTAAAAGAAAACAAAACACTTTTAGAATTCACCATAACAAAATAACAACCTTGCATTATTTTATTTTCCGCTGCAAACAATTTTTTATGTTTTGTAACAAACTAAACTTGTTTAGTTCTGTAACAAATAATTTGTTTTGTAACAAATTATTGTTTTCATCAAACAAATTTTTTTTAGTAACTAATAATTTGTTTTGTAACAAATTATTGTTTTCATCGTTTCATTCGAAAGATGTAAATCTATAGCTTGATTTATCCTTAATGTATCTAGGGACAACTTAACCTCAATATGTAACTTCTTCGGTAGACATAGCAGATCGAAACGTCTTAAAATTGTTGTTTTTGGATTTCCAAACTGTTAAATTTGAATCTCCAAATTCTATCATCTACCGAAGTTGTTACTAGGTTGAGTCACGACCAGGTCGCTCTCTTTAAGACGTTTCGTGGCACTACCCAAAGTTGTGCAAGGTAGACTATCAACCACGCCGCCTCCAGGATAAAACAAGCCCAGCTACAACTGTTCGATTAACTACTGCACTGTAGATAAATCGTTCGAGAATTACACCCTCAAAATATGGCTCAATCGTTTGATCGAAGCCACTCGATACGGTACGTAACCGCTCTATTCGAAACCGTTCAAATTAATATGGTATTATTACCATTCTATTATGGTGCTGAGACCACTCAAATATGGTGTTACCACCATTCTAACTTCTCCAAAACATGAATATGGCACTACGACCACTCAAATATGGTGATACCACCATTTCTCCTTAAAATTATTAAAATAATATATATACTGTTAAGATCATTCTTTAATATGATCTTAATAGCACTCTATATTCCGAAGAATCATATATTATCGAAGGGAATATGAACCTAAGACCAAGGGACTATGGTCTTAAGAACACTCTTAATACCGAAGGGACAGAAAGGAGTAGAAGAAGAAGAACGATTTGTTAAAATCGAAAGGGAGAAGAGAGAAAACCGCACAGGAAGCATCAACTGTGAGATTTTTGGTGTGAAGAATGAGTGGGGCGAGCTCTCCTTTTATAGGCAGAGTTACTTGGGGATTAAGTTTGCTTAATCCTTAAGCAAACGCGTTTTACGCGTGACTTGGGGATTAAGTTTGCTTAATCCTCAAGCAAACATGTTTTCTTAATTGGAAATATCCGGAAGCTTCTGGATACGGGTTTGGATCGGGTCGGAATGTAACACATCAATTTGTTACGCGTAACACTTTCGTATAATGAAAAATTAATTAATTAATTAATTAATTTAACATTTTAAAGTGACAAAAAAATATATATCAATTTTTTTAAGCGTTCACCCGTTCACAAAATTGGGTACCCCAAGGGCACACCCTTAGAGGTCACTTTTCCCGTATATAAACACTTACTAGTTGGGGTGACCCTTCAATGTGGGACATTTTTAAGTCACACCCACACACTAGTTTTTTTCATAGTGTTTTTCTTTCCAATTTTCTTCACTAGAATTAACTAGTGTTCCAACATAATGTGTACGAGTATATTATAAATAAATTATAGTAATTTTAAATATGTATTAATTTATTTATTTAATTAAAAATTATTGAGTAATTAAAAAAATTATAACTTTAAATTTCAGATAATTTTTTTTGTCTTAAATGCAATTTTTTTTGACAAAAGCTTAAAAGCAATTTTGATCCCTCTATTTTTAAAATTGTTAACTTTTGGTACCCCTATTTCTAAAACCGATTTTTTGATCCCCTATTTAAAAAGTCAAAAAAATATTTTGGGAATAAAAAGATGGTATTAAAATAATGCAATCAAATCCCAAGTATCATAAACGAAAAACATGATAAACAGAGCCACTCAAATAAATCCAATTCTTTTTTAAATTTCAATAATAATTTGTTATTTAATTTTTTGATAGTTGTAATATAGAATTTATAATTAAAATGACATGGAAATGAGATGTTAAATGATATGCCATGTAGGCAATGTCACATAAGCTTCATGTCATTAATGAACATGGCACATTATTTAGAGAGGAGAAAGACCAAAATATTTTGTTGACTTTTTAAACAGAGGGATCAAAAAACCGGTTTTAGAAATAGGGGTATCAAAAATTAACAATTTTGAAAATAGGGGGATCAAAATTGCATTCAAGTTTTTATTTTATTTATTTTTTTATGTATGTGTGTTTAATCATTGTATATAGAATCATATACACTTTTTGTTGTAAATATGATTCTAAATTTTGTTTTTTGAAGGAATGATTCTATATTTTGTTGTTTTTTCTTTTTTGATCAATTCATTCTATATTTTGTTGTTATAAGTAGAGATTATAATCGGTCCATTAATCAGCTGTGTTAGGTTAACAATTTAGTGCTTTTACTCTCATACGTTTGAAATTATATATTAAGAACCAATTTTTCAAAATTCTATACCTTTTTAATGCAAATTTATCGAATATATTAGTATTCACTATTTGTATGAACTATAGAGTTCATATGTGAGCACATGTTTTTGTCATTGCAGGACAAAACACACACGAAAACTCTGTTTTTGACGGTTCAGGAAAATTTAAGGAAAACAACAATGTGTTCCATGATAGAGATATGTTTCTAGAAGACTATAAAGAAATGAATAGAAGCTTTAAGATATATGTTTATCCTCACAGAAAAGATGATCCTTTTGCAAATGTGCTATTACCCGTGAAAACTGAACCCGGTGGCAATTATGCCAGTGAAAGTTACTTCAAGAAAGCGCTTATGAAGAGCCATTTCATTACAAAAGATCCAACAAAAGCAGATCTTTTCTTCATGCCTTTTTCCATAGCAAGTCTACGGCATGATCGTCGAGTTGGTGTGGGAGGTATCCAAGATTTCATTAGAGACTATGTTCAGAATATGATTCACAAGTATCCGTATTGGAACCGCACCGGTGGCGCGGATCACTTTTATGTGGCATGTCATTCAATTGGAAGGTCTGCTATGGATAAAGCACCTGATGTGAAATTCAATGCCATTCAAGTTGTTTGTTCATCAAGTTATTTCTTAAGTGGTTATATTGCTCATAAGGATGCATGCCTACCACAAATTTGGCCAAGAAAAGAAAATCCACCCAACCTTGTTTCATCAAATAGGTACCATTTCTTCCTCTTTCTAGGTACATTTATTATTGACGTAAACCTAATCCACCTGATTGATTCGACATCAACATGTTTTATATCATCGGAATGAAAAACTTGACCATCACCACTTTTGGGTCTAAAAATATGAACTAGACAACCAAAACTAGATTTTAAATTAATAGAGGACCAACTCCGTTAGTGATTAAAAATAGGAGGATCAAAACTGCGCAGTTAAGTCTAAAAAATTTCTAAAGAAACATTTCAACTATGATTTTATTACATGATATTTTTTTGCTTTTGTAAAAATGACAGGAAAAAGCTAGCTTTCTTTGCCGGAGAAGTGAATTCGCCAGTACGGATAAATCTTGTCGAGACATGGAAAAATGATACAGAAATCTTTGTTCACAATGGAAGACTAAAAACACCATACGGTGATGAGTTATTAGGAAGCAAGTTCTGTTTTCATGTTAGAGGCTATGAAGTGAACACAGCACGTATTGGTGATTCATTATACTATGGTTGTGTTCCAGTGATCATTGCCAACTATTATGACCTTCCTTTTGCAGATATTTTGAATTGGAAAAGTTTTTCTGTTGTTGTCACTACTTTAGATATACCTTTATTGAAAAAGATTCTGAAAGGTATAGTTAGTTCTGGTGAGTATTTGATGCTACAGAAGAATGTGTTGAAGGTAAGGGAGCATTTTCAATGGCATTCACCTCCACTTGACTTTGATGCATTCTATATGGTTATGTATGAATTATGGCTTAGACGAAGTTCTATACCTATTGTTTTGGGGGATTCATAG

Protein sequence

>MS.gene41739.t1

MLRPSSLYQYSHTHVASSFKSFFFFIPTTLALLTIFSILFYAYYTSIIFTHHRPHNHQSTLNFKSSSPKFILPSPTPHLTNTLHNNHSDQFIKSHTFQLGHGLGPQSQRGLPPQSSSKGQNTHENSVFDGSGKFKENNNVFHDRDMFLEDYKEMNRSFKIYVYPHRKDDPFANVLLPVKTEPGGNYASESYFKKALMKSHFITKDPTKADLFFMPFSIASLRHDHYVQNMIHKYPYWNRTGGADHFYVACHSIGRSAMDKAPDVKFNAIQVVCSSSYFLSGYIAHKDACLPQIWPRKENPPNLVSSNRKKLAFFAGEVNSPVRINLVETWKNDTEIFVHNGRLKTPYGDELLGSKFCFHVRGYEVNTARIGDSLYYGCVPVIIANYYDLPFADILNWKSFSVVVTTLDIPLLKKILKGIVSSGEYLMLQKNVLKVREHFQWHSPPLDFDAFYMVMYELWLRRSSIPIVLGDS