Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45578.t1 | GAU20823.1 | 98 | 101 | 2 | 0 | 37 | 137 | 36 | 136 | 2.50E-52 | 214.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45578.t1 | A6QPY8 | 50.6 | 83 | 30 | 2 | 45 | 127 | 38 | 109 | 1.7e-14 | 80.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45578.t1 | A0A2Z6MD87 | 98.0 | 101 | 2 | 0 | 37 | 137 | 36 | 136 | 1.8e-52 | 214.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene45578 | 0.804015 | 2.65E-49 | -1.69E-46 |
| MS.gene049341 | MS.gene45578 | 0.811994 | 5.30E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene45578 | 0.803981 | 2.69E-49 | -1.69E-46 |
| MS.gene049756 | MS.gene45578 | 0.831191 | 1.92E-55 | -1.69E-46 |
| MS.gene04984 | MS.gene45578 | 0.803452 | 3.46E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene45578 | 0.801452 | 8.94E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene45578 | 0.808682 | 2.75E-50 | -1.69E-46 |
| MS.gene050277 | MS.gene45578 | 0.834453 | 2.97E-56 | -1.69E-46 |
| MS.gene050303 | MS.gene45578 | 0.809827 | 1.56E-50 | -1.69E-46 |
| MS.gene050438 | MS.gene45578 | 0.844091 | 9.37E-59 | -1.69E-46 |
| MS.gene050719 | MS.gene45578 | 0.864535 | 1.13E-64 | -1.69E-46 |
| MS.gene050721 | MS.gene45578 | 0.870526 | 1.36E-66 | -1.69E-46 |
| MS.gene050724 | MS.gene45578 | 0.858911 | 5.95E-63 | -1.69E-46 |
| MS.gene050780 | MS.gene45578 | 0.834032 | 3.79E-56 | -1.69E-46 |
| MS.gene050815 | MS.gene45578 | 0.858209 | 9.64E-63 | -1.69E-46 |
| MS.gene050844 | MS.gene45578 | 0.807951 | 3.93E-50 | -1.69E-46 |
| MS.gene051063 | MS.gene45578 | 0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene051088 | MS.gene45578 | 0.828237 | 1.00E-54 | -1.69E-46 |
| MS.gene051243 | MS.gene45578 | 0.843815 | 1.11E-58 | -1.69E-46 |
| MS.gene051245 | MS.gene45578 | 0.84328 | 1.54E-58 | -1.69E-46 |
| MS.gene051247 | MS.gene45578 | 0.811476 | 6.87E-51 | -1.69E-46 |
| MS.gene051328 | MS.gene45578 | 0.836621 | 8.41E-57 | -1.69E-46 |
| MS.gene051349 | MS.gene45578 | 0.838248 | 3.22E-57 | -1.69E-46 |
| MS.gene051452 | MS.gene45578 | 0.828348 | 9.45E-55 | -1.69E-46 |
| MS.gene051577 | MS.gene45578 | 0.807443 | 5.04E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene45578 | 0.823004 | 1.75E-53 | -1.69E-46 |
| MS.gene051757 | MS.gene45578 | 0.865393 | 6.10E-65 | -1.69E-46 |
| MS.gene051903 | MS.gene45578 | 0.802206 | 6.26E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene45578 | 0.821283 | 4.38E-53 | -1.69E-46 |
| MS.gene052176 | MS.gene45578 | 0.818969 | 1.48E-52 | -1.69E-46 |
| MS.gene052286 | MS.gene45578 | 0.810368 | 1.19E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene45578 | 0.833651 | 4.72E-56 | -1.69E-46 |
| MS.gene052323 | MS.gene45578 | 0.803884 | 2.82E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene45578 | 0.83963 | 1.41E-57 | -1.69E-46 |
| MS.gene052613 | MS.gene45578 | 0.80887 | 2.50E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene45578 | 0.806221 | 9.14E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene45578 | 0.803741 | 3.02E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene45578 | 0.815622 | 8.41E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene45578 | 0.82596 | 3.52E-54 | -1.69E-46 |
| MS.gene053008 | MS.gene45578 | 0.814031 | 1.90E-51 | -1.69E-46 |
| MS.gene053630 | MS.gene45578 | 0.803024 | 4.25E-49 | -1.69E-46 |
| MS.gene054472 | MS.gene45578 | 0.828812 | 7.30E-55 | -1.69E-46 |
| MS.gene055133 | MS.gene45578 | 0.801372 | 9.29E-49 | -1.69E-46 |
| MS.gene055591 | MS.gene45578 | -0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene055623 | MS.gene45578 | 0.826243 | 3.02E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene45578 | 0.822309 | 2.54E-53 | -1.69E-46 |
| MS.gene056069 | MS.gene45578 | -0.807335 | 5.32E-50 | -1.69E-46 |
| MS.gene056432 | MS.gene45578 | 0.826533 | 2.58E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene45578 | 0.801525 | 8.64E-49 | -1.69E-46 |
| MS.gene056580 | MS.gene45578 | 0.802582 | 5.24E-49 | -1.69E-46 |
| MS.gene056631 | MS.gene45578 | 0.844934 | 5.56E-59 | -1.69E-46 |
| MS.gene056760 | MS.gene45578 | 0.854485 | 1.19E-61 | -1.69E-46 |
| MS.gene056875 | MS.gene45578 | 0.801248 | 9.85E-49 | -1.69E-46 |
| MS.gene057057 | MS.gene45578 | 0.80961 | 1.74E-50 | -1.69E-46 |
| MS.gene057140 | MS.gene45578 | 0.876231 | 1.65E-68 | -1.69E-46 |
| MS.gene057234 | MS.gene45578 | 0.837335 | 5.52E-57 | -1.69E-46 |
| MS.gene057260 | MS.gene45578 | 0.858915 | 5.94E-63 | -1.69E-46 |
| MS.gene057754 | MS.gene45578 | 0.800673 | 1.29E-48 | -1.69E-46 |
| MS.gene05795 | MS.gene45578 | 0.805977 | 1.03E-49 | -1.69E-46 |
| MS.gene057980 | MS.gene45578 | 0.803148 | 4.00E-49 | -1.69E-46 |
| MS.gene058055 | MS.gene45578 | 0.817569 | 3.08E-52 | -1.69E-46 |
| MS.gene058084 | MS.gene45578 | 0.825989 | 3.47E-54 | -1.69E-46 |
| MS.gene058146 | MS.gene45578 | 0.811748 | 6.00E-51 | -1.69E-46 |
| MS.gene058168 | MS.gene45578 | 0.818578 | 1.82E-52 | -1.69E-46 |
| MS.gene058182 | MS.gene45578 | 0.848114 | 7.53E-60 | -1.69E-46 |
| MS.gene058238 | MS.gene45578 | 0.835479 | 1.64E-56 | -1.69E-46 |
| MS.gene058399 | MS.gene45578 | 0.81041 | 1.17E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene45578 | 0.809264 | 2.06E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene45578 | 0.92369 | 1.90E-89 | -1.69E-46 |
| MS.gene058982 | MS.gene45578 | 0.804867 | 1.76E-49 | -1.69E-46 |
| MS.gene059249 | MS.gene45578 | 0.84096 | 6.35E-58 | -1.69E-46 |
| MS.gene059569 | MS.gene45578 | 0.823769 | 1.16E-53 | -1.69E-46 |
| MS.gene059789 | MS.gene45578 | 0.807948 | 3.94E-50 | -1.69E-46 |
| MS.gene059830 | MS.gene45578 | 0.805074 | 1.59E-49 | -1.69E-46 |
| MS.gene059898 | MS.gene45578 | 0.855659 | 5.44E-62 | -1.69E-46 |
| MS.gene06001 | MS.gene45578 | 0.838138 | 3.43E-57 | -1.69E-46 |
| MS.gene060322 | MS.gene45578 | 0.820905 | 5.36E-53 | -1.69E-46 |
| MS.gene060429 | MS.gene45578 | 0.825019 | 5.89E-54 | -1.69E-46 |
| MS.gene060476 | MS.gene45578 | 0.802771 | 4.79E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene45578 | 0.860876 | 1.52E-63 | -1.69E-46 |
| MS.gene060586 | MS.gene45578 | 0.821271 | 4.41E-53 | -1.69E-46 |
| MS.gene060619 | MS.gene45578 | 0.822856 | 1.89E-53 | -1.69E-46 |
| MS.gene060803 | MS.gene45578 | 0.823865 | 1.10E-53 | -1.69E-46 |
| MS.gene060998 | MS.gene45578 | 0.80659 | 7.64E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45578.t1 | MTR_3g037570 | 95.652 | 138 | 6 | 0 | 1 | 138 | 1 | 138 | 6.89e-94 | 268 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45578.t1 | AT1G26550 | 87.603 | 121 | 15 | 0 | 18 | 138 | 16 | 136 | 1.08e-68 | 204 |
Find 0 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTATTTTCTTTACTT+TGG | + | 23426:65616-65635 | MS.gene45578:intron | 10.0% |
| !! | ATATATAATAACAACTAGAA+GGG | - | 23426:66381-66400 | None:intergenic | 15.0% |
| !!! | AAATGCTTTTCAAAAATAAA+CGG | + | 23426:65397-65416 | MS.gene45578:intron | 15.0% |
| !!! | ATATTTTGATATCAACAAAT+CGG | - | 23426:66006-66025 | None:intergenic | 15.0% |
| !! | CATATATAATAACAACTAGA+AGG | - | 23426:66382-66401 | None:intergenic | 20.0% |
| !! | TTAAATAGAAAGCCAAATAA+GGG | - | 23426:65820-65839 | None:intergenic | 20.0% |
| !! | TTTAAATAGAAAGCCAAATA+AGG | - | 23426:65821-65840 | None:intergenic | 20.0% |
| !!! | AATGCTTTTCAAAAATAAAC+GGG | + | 23426:65398-65417 | MS.gene45578:intron | 20.0% |
| !!! | ATTTGGCTTTCTATTTAAAA+TGG | + | 23426:65822-65841 | MS.gene45578:intron | 20.0% |
| !!! | TTGCAAATAGATTGAAATTT+TGG | + | 23426:65300-65319 | MS.gene45578:intron | 20.0% |
| !!! | TTGTTTTCATTGTTTTTGAA+AGG | + | 23426:65336-65355 | MS.gene45578:intron | 20.0% |
| !!! | TTTGGCTTTCTATTTAAAAT+GGG | + | 23426:65823-65842 | MS.gene45578:intron | 20.0% |
| ! | AAACTGTAAAATGAACATAG+TGG | - | 23426:65280-65299 | None:intergenic | 25.0% |
| ! | AACTGTAAAATGAACATAGT+GGG | - | 23426:65279-65298 | None:intergenic | 25.0% |
| ! | CGTAGAATTACATTCATTTA+TGG | + | 23426:65464-65483 | MS.gene45578:intron | 25.0% |
| ! | GAAACTTATTATGTGGTAAA+TGG | + | 23426:65851-65870 | MS.gene45578:intron | 25.0% |
| ! | GTTGAAGTGAAAATAAAAAC+AGG | - | 23426:65222-65241 | None:intergenic | 25.0% |
| ! | TATACACTAGGATAAAACAT+AGG | + | 23426:65643-65662 | MS.gene45578:intron | 25.0% |
| !! | ACTGCTTGGAAATTTTTAAA+AGG | + | 23426:65714-65733 | MS.gene45578:intron | 25.0% |
| !! | ATGCTTTTCAAAAATAAACG+GGG | + | 23426:65399-65418 | MS.gene45578:intron | 25.0% |
| !! | TTGGCTTTCTATTTAAAATG+GGG | + | 23426:65824-65843 | MS.gene45578:intron | 25.0% |
| !!! | CTGCTTGGAAATTTTTAAAA+GGG | + | 23426:65715-65734 | MS.gene45578:intron | 25.0% |
| AAAAAGAGACTATAACTGCT+TGG | + | 23426:65700-65719 | MS.gene45578:intron | 30.0% | |
| ACTGTAAAATGAACATAGTG+GGG | - | 23426:65278-65297 | None:intergenic | 30.0% | |
| CATATCTTATGTGAGAAACA+AGG | + | 23426:65508-65527 | MS.gene45578:CDS | 30.0% | |
| GTATACACTAAACCCTTATT+TGG | + | 23426:65805-65824 | MS.gene45578:intron | 30.0% | |
| ! | ACTGACATGCATATGTATTT+TGG | - | 23426:66099-66118 | None:intergenic | 30.0% |
| ! | TACTTTGGAAGTTATACACT+AGG | + | 23426:65631-65650 | MS.gene45578:intron | 30.0% |
| !! | ACATGCATATGTATTTTGGA+GGG | - | 23426:66095-66114 | None:intergenic | 30.0% |
| ATTGAAGTAAATGAACCCTG+AGG | - | 23426:65194-65213 | None:intergenic | 35.0% | |
| GGAAGGGGATAAAATAACTA+TGG | - | 23426:65884-65903 | None:intergenic | 35.0% | |
| TGAAAGAAATTTAGCGTGTC+TGG | - | 23426:65434-65453 | None:intergenic | 35.0% | |
| !! | ATGCATATGTATTTTGGAGG+GGG | - | 23426:66093-66112 | None:intergenic | 35.0% |
| !! | CATGCATATGTATTTTGGAG+GGG | - | 23426:66094-66113 | None:intergenic | 35.0% |
| !! | GACATGCATATGTATTTTGG+AGG | - | 23426:66096-66115 | None:intergenic | 35.0% |
| !! | GAGCAATACGTTGATTTGAA+AGG | - | 23426:66353-66372 | None:intergenic | 35.0% |
| AAGTGATGAGAATGCTTCCA+AGG | + | 23426:65084-65103 | MS.gene45578:CDS | 40.0% | |
| AGTGATGAGAATGCTTCCAA+GGG | + | 23426:65085-65104 | MS.gene45578:CDS | 40.0% | |
| GCATTGAATCCATTTCTGAG+CGG | - | 23426:65905-65924 | None:intergenic | 40.0% | |
| GGGCTGAGAAACTTATTATG+TGG | + | 23426:65844-65863 | MS.gene45578:intron | 40.0% | |
| GGTACTTGCACTTATGTCAA+AGG | + | 23426:65142-65161 | MS.gene45578:CDS | 40.0% | |
| GTCAGTAAATACCCGTCAAT+GGG | - | 23426:66053-66072 | None:intergenic | 40.0% | |
| TATACCTTTGCAAACTCTGC+TGG | - | 23426:65598-65617 | None:intergenic | 40.0% | |
| TGAAGGCAACTTCCTGAAAT+GGG | - | 23426:66304-66323 | None:intergenic | 40.0% | |
| TTGAAGGCAACTTCCTGAAA+TGG | - | 23426:66305-66324 | None:intergenic | 40.0% | |
| ! | GAACATAGTGGGGAAACTAT+TGG | - | 23426:65268-65287 | None:intergenic | 40.0% |
| !! | AAGATGGTTGGCTTGACAAT+GGG | + | 23426:65560-65579 | MS.gene45578:CDS | 40.0% |
| !! | ATGCATGTCAGTTTTGTCGA+AGG | + | 23426:66107-66126 | MS.gene45578:intron | 40.0% |
| !! | TGCATATGTATTTTGGAGGG+GGG | - | 23426:66092-66111 | None:intergenic | 40.0% |
| AACTCCAACAGGTGTGTTGA+AGG | - | 23426:66321-66340 | None:intergenic | 45.0% | |
| AATCCATTTCTGAGCGGAAG+GGG | - | 23426:65899-65918 | None:intergenic | 45.0% | |
| ACAAGAAGCTGCAAGATGGT+TGG | + | 23426:65548-65567 | MS.gene45578:CDS | 45.0% | |
| ACAGCTGAATTCAAGACTGC+TGG | - | 23426:65939-65958 | None:intergenic | 45.0% | |
| ACCATCTTGCAGCTTCTTGT+AGG | - | 23426:65548-65567 | None:intergenic | 45.0% | |
| CCAAGGGAAAAGGAAAAGGT+GGG | + | 23426:65101-65120 | MS.gene45578:CDS | 45.0% | |
| CTGCATACAATGCCCATTGA+CGG | + | 23426:66038-66057 | MS.gene45578:intron | 45.0% | |
| GAATCCATTTCTGAGCGGAA+GGG | - | 23426:65900-65919 | None:intergenic | 45.0% | |
| GAATGCCCATCAGGAAAGAA+GGG | + | 23426:66239-66258 | MS.gene45578:CDS | 45.0% | |
| GAGAATGCTTCCAAGGGAAA+AGG | + | 23426:65091-65110 | MS.gene45578:CDS | 45.0% | |
| GAGTATTCTGAATGCCCATC+AGG | + | 23426:66230-66249 | MS.gene45578:CDS | 45.0% | |
| GCAAAGGAGTCAAAGGGTAA+GGG | + | 23426:65043-65062 | MS.gene45578:CDS | 45.0% | |
| GCAAAGGCAAAGGAGTCAAA+GGG | + | 23426:65037-65056 | MS.gene45578:CDS | 45.0% | |
| GCAGTCTTGAATTCAGCTGT+AGG | + | 23426:65939-65958 | MS.gene45578:intron | 45.0% | |
| GCTTCCAAGGGAAAAGGAAA+AGG | + | 23426:65097-65116 | MS.gene45578:CDS | 45.0% | |
| GGTCAGTAAATACCCGTCAA+TGG | - | 23426:66054-66073 | None:intergenic | 45.0% | |
| TCCAAGGGAAAAGGAAAAGG+TGG | + | 23426:65100-65119 | MS.gene45578:CDS | 45.0% | |
| TGAATCCATTTCTGAGCGGA+AGG | - | 23426:65901-65920 | None:intergenic | 45.0% | |
| TGAATGCCCATCAGGAAAGA+AGG | + | 23426:66238-66257 | MS.gene45578:CDS | 45.0% | |
| TGCATACAATGCCCATTGAC+GGG | + | 23426:66039-66058 | MS.gene45578:intron | 45.0% | |
| ! | TTGGCTTGACAATGGGGATA+AGG | + | 23426:65567-65586 | MS.gene45578:CDS | 45.0% |
| !! | AGATGGTTGGCTTGACAATG+GGG | + | 23426:65561-65580 | MS.gene45578:CDS | 45.0% |
| !! | CAAGATGGTTGGCTTGACAA+TGG | + | 23426:65559-65578 | MS.gene45578:CDS | 45.0% |
| !! | CGTTGATTTGAAAGGAGCAC+TGG | - | 23426:66345-66364 | None:intergenic | 45.0% |
| AAAGGTGGGAAAGCTGCTGA+TGG | + | 23426:65115-65134 | MS.gene45578:CDS | 50.0% | |
| AAGGTGGGAAAGCTGCTGAT+GGG | + | 23426:65116-65135 | MS.gene45578:CDS | 50.0% | |
| ACCTTTGCAAACTCTGCTGG+AGG | - | 23426:65595-65614 | None:intergenic | 50.0% | |
| AGACCTTGGATGGTTTCCAC+GGG | + | 23426:66265-66284 | MS.gene45578:CDS | 50.0% | |
| ATACTCTTGAGCTACCTGCG+AGG | - | 23426:66216-66235 | None:intergenic | 50.0% | |
| ATGGTTTCCACGGGGAAAGA+TGG | + | 23426:66274-66293 | MS.gene45578:CDS | 50.0% | |
| CGCAAAGGCAAAGGAGTCAA+AGG | + | 23426:65036-65055 | MS.gene45578:CDS | 50.0% | |
| CTCCACCCTTCTTTCCTGAT+GGG | - | 23426:66247-66266 | None:intergenic | 50.0% | |
| GACGGGTATTTACTGACCAC+AGG | + | 23426:66056-66075 | MS.gene45578:intron | 50.0% | |
| GAGACCTTGGATGGTTTCCA+CGG | + | 23426:66264-66283 | MS.gene45578:CDS | 50.0% | |
| GCCTACAAGAAGCTGCAAGA+TGG | + | 23426:65544-65563 | MS.gene45578:CDS | 50.0% | |
| GGCAAAGGAGTCAAAGGGTA+AGG | + | 23426:65042-65061 | MS.gene45578:CDS | 50.0% | |
| GGGAAAAGACGCAAAGGCAA+AGG | + | 23426:65027-65046 | MS.gene45578:CDS | 50.0% | |
| GTCAAAGGGTAAGGGAAAGC+AGG | + | 23426:65051-65070 | MS.gene45578:CDS | 50.0% | |
| GTTGCCTTCAACACACCTGT+TGG | + | 23426:66314-66333 | MS.gene45578:CDS | 50.0% | |
| TAATATTTCGCCGACCTCGC+AGG | + | 23426:66199-66218 | MS.gene45578:intron | 50.0% | |
| TATCCCCTTCCGCTCAGAAA+TGG | + | 23426:65893-65912 | MS.gene45578:intron | 50.0% | |
| TCCTCCAGCAGAGTTTGCAA+AGG | + | 23426:65591-65610 | MS.gene45578:CDS | 50.0% | |
| TCTCCACCCTTCTTTCCTGA+TGG | - | 23426:66248-66267 | None:intergenic | 50.0% | |
| ! | AAAGATGGCTGGCCCATTTC+AGG | + | 23426:66289-66308 | MS.gene45578:CDS | 50.0% |
| ! | AACCCTGAGGTGCTTGTGAA+TGG | - | 23426:65181-65200 | None:intergenic | 50.0% |
| ! | ACCCTGAGGTGCTTGTGAAT+GGG | - | 23426:65180-65199 | None:intergenic | 50.0% |
| ! | CCCACCTTTTCCTTTTCCCT+TGG | - | 23426:65104-65123 | None:intergenic | 50.0% |
| !! | TGTATTTTGGAGGGGGGATC+AGG | - | 23426:66086-66105 | None:intergenic | 50.0% |
| AAGGGAAAGCAGGCTGCAAG+TGG | + | 23426:65061-65080 | MS.gene45578:CDS | 55.0% | |
| AGAAGGGTGGAGACCTTGGA+TGG | + | 23426:66255-66274 | MS.gene45578:CDS | 55.0% | |
| CCCCATTCACAAGCACCTCA+GGG | + | 23426:65176-65195 | MS.gene45578:intron | 55.0% | |
| GACCTTGGATGGTTTCCACG+GGG | + | 23426:66266-66285 | MS.gene45578:CDS | 55.0% | |
| GGAAAGAAGGGTGGAGACCT+TGG | + | 23426:66251-66270 | MS.gene45578:CDS | 55.0% | |
| TCCCCATTCACAAGCACCTC+AGG | + | 23426:65175-65194 | MS.gene45578:intron | 55.0% | |
| TCTTGAGCTACCTGCGAGGT+CGG | - | 23426:66212-66231 | None:intergenic | 55.0% | |
| TGCCCATCAGGAAAGAAGGG+TGG | + | 23426:66242-66261 | MS.gene45578:CDS | 55.0% | |
| TTCCCCGTGGAAACCATCCA+AGG | - | 23426:66271-66290 | None:intergenic | 55.0% | |
| TTTCCACGGGGAAAGATGGC+TGG | + | 23426:66278-66297 | MS.gene45578:CDS | 55.0% | |
| ! | CCCTGAGGTGCTTGTGAATG+GGG | - | 23426:65179-65198 | None:intergenic | 55.0% |
| !! | GGAGCACTGGTAACTCCAAC+AGG | - | 23426:66332-66351 | None:intergenic | 55.0% |
| GGGGGGATCAGGATTTCCTG+TGG | - | 23426:66075-66094 | None:intergenic | 60.0% | |
| !! | GGGAAAGCTGCTGATGGGCT+TGG | + | 23426:65121-65140 | MS.gene45578:CDS | 60.0% |
| GGGCCAGCCATCTTTCCCCG+TGG | - | 23426:66284-66303 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 23426 | gene | 65025 | 66415 | 65025 | ID=MS.gene45578 |
| 23426 | mRNA | 65025 | 66415 | 65025 | ID=MS.gene45578.t1;Parent=MS.gene45578 |
| 23426 | exon | 65025 | 65163 | 65025 | ID=MS.gene45578.t1.exon1;Parent=MS.gene45578.t1 |
| 23426 | CDS | 65025 | 65163 | 65025 | ID=cds.MS.gene45578.t1;Parent=MS.gene45578.t1 |
| 23426 | exon | 65503 | 65612 | 65503 | ID=MS.gene45578.t1.exon2;Parent=MS.gene45578.t1 |
| 23426 | CDS | 65503 | 65612 | 65503 | ID=cds.MS.gene45578.t1;Parent=MS.gene45578.t1 |
| 23426 | exon | 66221 | 66415 | 66221 | ID=MS.gene45578.t1.exon3;Parent=MS.gene45578.t1 |
| 23426 | CDS | 66221 | 66415 | 66221 | ID=cds.MS.gene45578.t1;Parent=MS.gene45578.t1 |
| Gene Sequence |
| Protein sequence |
