Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49733.t1 | XP_003630390.1 | 97.5 | 640 | 16 | 0 | 1 | 640 | 1 | 640 | 0.00E+00 | 1146 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49733.t1 | G7LFS2 | 97.5 | 640 | 16 | 0 | 1 | 640 | 1 | 640 | 0.0e+00 | 1146.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene49733 | 0.804761 | 1.85E-49 | -1.69E-46 |
| MS.gene04918 | MS.gene49733 | 0.809019 | 2.33E-50 | -1.69E-46 |
| MS.gene04919 | MS.gene49733 | 0.816679 | 4.88E-52 | -1.69E-46 |
| MS.gene04920 | MS.gene49733 | 0.823276 | 1.51E-53 | -1.69E-46 |
| MS.gene049283 | MS.gene49733 | 0.856231 | 3.70E-62 | -1.69E-46 |
| MS.gene049368 | MS.gene49733 | 0.806211 | 9.18E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene49733 | 0.815379 | 9.53E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene49733 | 0.834461 | 2.96E-56 | -1.69E-46 |
| MS.gene04998 | MS.gene49733 | 0.826317 | 2.90E-54 | -1.69E-46 |
| MS.gene050084 | MS.gene49733 | 0.817695 | 2.89E-52 | -1.69E-46 |
| MS.gene050085 | MS.gene49733 | 0.839702 | 1.35E-57 | -1.69E-46 |
| MS.gene050359 | MS.gene49733 | 0.852129 | 5.65E-61 | -1.69E-46 |
| MS.gene050386 | MS.gene49733 | 0.801828 | 7.49E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene49733 | 0.813022 | 3.16E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene49733 | 0.842862 | 2.00E-58 | -1.69E-46 |
| MS.gene050654 | MS.gene49733 | 0.874847 | 4.90E-68 | -1.69E-46 |
| MS.gene050689 | MS.gene49733 | 0.816284 | 5.99E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene49733 | 0.81172 | 6.08E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene49733 | 0.825816 | 3.81E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene49733 | 0.815701 | 8.08E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene49733 | 0.855228 | 7.26E-62 | -1.69E-46 |
| MS.gene051043 | MS.gene49733 | 0.817559 | 3.10E-52 | -1.69E-46 |
| MS.gene051184 | MS.gene49733 | 0.853871 | 1.79E-61 | -1.69E-46 |
| MS.gene051226 | MS.gene49733 | 0.800144 | 1.65E-48 | -1.69E-46 |
| MS.gene051234 | MS.gene49733 | 0.833779 | 4.38E-56 | -1.69E-46 |
| MS.gene051343 | MS.gene49733 | 0.840655 | 7.63E-58 | -1.69E-46 |
| MS.gene051381 | MS.gene49733 | 0.816241 | 6.12E-52 | -1.69E-46 |
| MS.gene051676 | MS.gene49733 | 0.800372 | 1.49E-48 | -1.69E-46 |
| MS.gene051831 | MS.gene49733 | 0.820511 | 6.60E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene49733 | 0.803094 | 4.11E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene49733 | 0.808064 | 3.72E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene49733 | 0.823567 | 1.29E-53 | -1.69E-46 |
| MS.gene052118 | MS.gene49733 | 0.813616 | 2.34E-51 | -1.69E-46 |
| MS.gene052242 | MS.gene49733 | -0.801934 | 7.12E-49 | -1.69E-46 |
| MS.gene052296 | MS.gene49733 | 0.823982 | 1.03E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene49733 | 0.842697 | 2.21E-58 | -1.69E-46 |
| MS.gene052342 | MS.gene49733 | 0.838762 | 2.37E-57 | -1.69E-46 |
| MS.gene052434 | MS.gene49733 | 0.829941 | 3.88E-55 | -1.69E-46 |
| MS.gene052533 | MS.gene49733 | 0.804311 | 2.30E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene49733 | 0.811679 | 6.20E-51 | -1.69E-46 |
| MS.gene052932 | MS.gene49733 | 0.81786 | 2.65E-52 | -1.69E-46 |
| MS.gene053058 | MS.gene49733 | 0.839107 | 1.93E-57 | -1.69E-46 |
| MS.gene053295 | MS.gene49733 | 0.827903 | 1.21E-54 | -1.69E-46 |
| MS.gene053298 | MS.gene49733 | 0.814575 | 1.44E-51 | -1.69E-46 |
| MS.gene053456 | MS.gene49733 | 0.826588 | 2.50E-54 | -1.69E-46 |
| MS.gene053564 | MS.gene49733 | 0.829089 | 6.26E-55 | -1.69E-46 |
| MS.gene053726 | MS.gene49733 | 0.827886 | 1.22E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene49733 | 0.812745 | 3.63E-51 | -1.69E-46 |
| MS.gene053879 | MS.gene49733 | 0.860605 | 1.84E-63 | -1.69E-46 |
| MS.gene054004 | MS.gene49733 | 0.830033 | 3.69E-55 | -1.69E-46 |
| MS.gene054892 | MS.gene49733 | 0.848607 | 5.50E-60 | -1.69E-46 |
| MS.gene054893 | MS.gene49733 | 0.859759 | 3.31E-63 | -1.69E-46 |
| MS.gene055150 | MS.gene49733 | 0.803361 | 3.62E-49 | -1.69E-46 |
| MS.gene055222 | MS.gene49733 | 0.805756 | 1.14E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene49733 | 0.841329 | 5.08E-58 | -1.69E-46 |
| MS.gene056045 | MS.gene49733 | 0.815695 | 8.10E-52 | -1.69E-46 |
| MS.gene056071 | MS.gene49733 | 0.811543 | 6.64E-51 | -1.69E-46 |
| MS.gene056097 | MS.gene49733 | 0.828688 | 7.82E-55 | -1.69E-46 |
| MS.gene056181 | MS.gene49733 | 0.845162 | 4.82E-59 | -1.69E-46 |
| MS.gene056699 | MS.gene49733 | 0.809051 | 2.29E-50 | -1.69E-46 |
| MS.gene056786 | MS.gene49733 | 0.805075 | 1.59E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene49733 | 0.808836 | 2.55E-50 | -1.69E-46 |
| MS.gene056831 | MS.gene49733 | 0.822552 | 2.23E-53 | -1.69E-46 |
| MS.gene056849 | MS.gene49733 | 0.805373 | 1.38E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene49733 | 0.805484 | 1.31E-49 | -1.69E-46 |
| MS.gene056992 | MS.gene49733 | 0.836926 | 7.03E-57 | -1.69E-46 |
| MS.gene057093 | MS.gene49733 | 0.801664 | 8.09E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene49733 | 0.817176 | 3.78E-52 | -1.69E-46 |
| MS.gene057622 | MS.gene49733 | 0.853621 | 2.12E-61 | -1.69E-46 |
| MS.gene05781 | MS.gene49733 | 0.808377 | 3.19E-50 | -1.69E-46 |
| MS.gene057890 | MS.gene49733 | -0.814329 | 1.63E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene49733 | 0.833026 | 6.76E-56 | -1.69E-46 |
| MS.gene058054 | MS.gene49733 | 0.811643 | 6.32E-51 | -1.69E-46 |
| MS.gene058095 | MS.gene49733 | 0.815377 | 9.54E-52 | -1.69E-46 |
| MS.gene058159 | MS.gene49733 | 0.836135 | 1.12E-56 | -1.69E-46 |
| MS.gene058292 | MS.gene49733 | 0.818923 | 1.52E-52 | -1.69E-46 |
| MS.gene058429 | MS.gene49733 | 0.822574 | 2.20E-53 | -1.69E-46 |
| MS.gene058592 | MS.gene49733 | 0.845388 | 4.19E-59 | -1.69E-46 |
| MS.gene058758 | MS.gene49733 | 0.802463 | 5.54E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene49733 | 0.81015 | 1.33E-50 | -1.69E-46 |
| MS.gene05878 | MS.gene49733 | 0.822048 | 2.92E-53 | -1.69E-46 |
| MS.gene059007 | MS.gene49733 | 0.818274 | 2.13E-52 | -1.69E-46 |
| MS.gene059146 | MS.gene49733 | 0.858393 | 8.50E-63 | -1.69E-46 |
| MS.gene059170 | MS.gene49733 | 0.838444 | 2.87E-57 | -1.69E-46 |
| MS.gene05952 | MS.gene49733 | 0.848424 | 6.18E-60 | -1.69E-46 |
| MS.gene05985 | MS.gene49733 | -0.815015 | 1.15E-51 | -1.69E-46 |
| MS.gene059901 | MS.gene49733 | -0.826711 | 2.34E-54 | -1.69E-46 |
| MS.gene06010 | MS.gene49733 | 0.802361 | 5.82E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene49733 | 0.825408 | 4.76E-54 | -1.69E-46 |
| MS.gene060259 | MS.gene49733 | 0.8163 | 5.94E-52 | -1.69E-46 |
| MS.gene060763 | MS.gene49733 | 0.853624 | 2.11E-61 | -1.69E-46 |
| MS.gene060932 | MS.gene49733 | 0.824635 | 7.26E-54 | -1.69E-46 |
| MS.gene060933 | MS.gene49733 | 0.842116 | 3.15E-58 | -1.69E-46 |
| MS.gene060935 | MS.gene49733 | 0.824577 | 7.49E-54 | -1.69E-46 |
| MS.gene060937 | MS.gene49733 | 0.84691 | 1.61E-59 | -1.69E-46 |
| MS.gene061100 | MS.gene49733 | 0.853948 | 1.70E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49733.t1 | MTR_8g095080 | 97.500 | 640 | 16 | 0 | 1 | 640 | 1 | 640 | 0.0 | 1280 |
| MS.gene49733.t1 | MTR_8g095080 | 98.305 | 472 | 8 | 0 | 1 | 472 | 1 | 472 | 0.0 | 959 |
| MS.gene49733.t1 | MTR_3g097240 | 71.831 | 568 | 143 | 6 | 73 | 640 | 73 | 623 | 0.0 | 769 |
| MS.gene49733.t1 | MTR_1g096970 | 64.022 | 542 | 183 | 6 | 101 | 637 | 2 | 536 | 0.0 | 676 |
| MS.gene49733.t1 | MTR_3g097240 | 75.584 | 385 | 80 | 4 | 73 | 457 | 73 | 443 | 0.0 | 584 |
| MS.gene49733.t1 | MTR_3g097240 | 74.167 | 360 | 79 | 4 | 73 | 432 | 73 | 418 | 0.0 | 535 |
| MS.gene49733.t1 | MTR_3g114010 | 45.908 | 501 | 233 | 7 | 100 | 578 | 76 | 560 | 1.80e-143 | 430 |
| MS.gene49733.t1 | MTR_1g025340 | 49.268 | 410 | 200 | 3 | 105 | 512 | 86 | 489 | 7.35e-126 | 384 |
| MS.gene49733.t1 | MTR_0318s0020 | 25.551 | 454 | 257 | 12 | 150 | 531 | 128 | 572 | 6.38e-28 | 119 |
| MS.gene49733.t1 | MTR_1g044135 | 29.187 | 209 | 138 | 2 | 150 | 355 | 43 | 244 | 9.37e-17 | 84.3 |
| MS.gene49733.t1 | MTR_1g044135 | 28.966 | 145 | 90 | 3 | 373 | 513 | 440 | 575 | 2.55e-13 | 73.6 |
| MS.gene49733.t1 | MTR_1g073890 | 27.907 | 215 | 146 | 2 | 150 | 361 | 46 | 254 | 2.26e-16 | 83.2 |
| MS.gene49733.t1 | MTR_1g073890 | 30.137 | 146 | 87 | 3 | 373 | 513 | 410 | 545 | 1.19e-12 | 71.2 |
| MS.gene49733.t1 | MTR_6g461910 | 27.570 | 214 | 147 | 3 | 150 | 359 | 36 | 245 | 1.77e-13 | 73.9 |
| MS.gene49733.t1 | MTR_6g461910 | 33.333 | 141 | 83 | 3 | 373 | 510 | 356 | 488 | 4.55e-13 | 72.4 |
| MS.gene49733.t1 | MTR_1g092540 | 24.528 | 212 | 148 | 4 | 149 | 355 | 25 | 229 | 2.02e-13 | 73.9 |
| MS.gene49733.t1 | MTR_1g092540 | 31.250 | 144 | 86 | 3 | 371 | 510 | 433 | 567 | 2.98e-13 | 73.2 |
| MS.gene49733.t1 | MTR_1g061540 | 30.070 | 143 | 87 | 3 | 373 | 513 | 387 | 518 | 9.88e-13 | 71.2 |
| MS.gene49733.t1 | MTR_3g091180 | 29.801 | 151 | 88 | 4 | 371 | 513 | 424 | 564 | 2.18e-11 | 67.4 |
| MS.gene49733.t1 | MTR_7g103490 | 37.500 | 88 | 55 | 0 | 150 | 237 | 29 | 116 | 5.15e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49733.t1 | AT1G34320 | 56.383 | 658 | 266 | 9 | 1 | 640 | 1 | 655 | 0.0 | 703 |
| MS.gene49733.t1 | AT1G34320 | 56.383 | 658 | 266 | 9 | 1 | 640 | 1 | 655 | 0.0 | 703 |
| MS.gene49733.t1 | AT5G08660 | 53.385 | 650 | 279 | 9 | 1 | 640 | 1 | 636 | 0.0 | 614 |
| MS.gene49733.t1 | AT5G08660 | 53.385 | 650 | 279 | 9 | 1 | 640 | 1 | 636 | 0.0 | 614 |
| MS.gene49733.t1 | AT5G08660 | 53.385 | 650 | 279 | 9 | 1 | 640 | 1 | 636 | 0.0 | 614 |
| MS.gene49733.t1 | AT5G08660 | 65.423 | 402 | 135 | 2 | 71 | 472 | 74 | 471 | 2.16e-178 | 514 |
| MS.gene49733.t1 | AT1G30755 | 48.723 | 470 | 228 | 5 | 100 | 562 | 83 | 546 | 7.40e-143 | 429 |
| MS.gene49733.t1 | AT1G30755 | 48.723 | 470 | 228 | 5 | 100 | 562 | 83 | 546 | 7.40e-143 | 429 |
| MS.gene49733.t1 | AT1G30755 | 48.723 | 470 | 228 | 5 | 100 | 562 | 83 | 546 | 7.40e-143 | 429 |
| MS.gene49733.t1 | AT1G30755 | 52.279 | 373 | 175 | 2 | 100 | 471 | 83 | 453 | 1.36e-128 | 387 |
| MS.gene49733.t1 | AT1G30755 | 51.253 | 359 | 172 | 2 | 100 | 457 | 83 | 439 | 2.27e-117 | 357 |
| MS.gene49733.t1 | AT1G30755 | 51.253 | 359 | 172 | 2 | 100 | 457 | 83 | 439 | 2.27e-117 | 357 |
| MS.gene49733.t1 | AT5G51670 | 24.235 | 425 | 260 | 7 | 145 | 512 | 32 | 451 | 8.71e-23 | 102 |
| MS.gene49733.t1 | AT5G51670 | 24.235 | 425 | 260 | 7 | 145 | 512 | 32 | 451 | 8.71e-23 | 102 |
| MS.gene49733.t1 | AT3G23160 | 28.708 | 209 | 140 | 2 | 150 | 355 | 43 | 245 | 1.11e-16 | 84.0 |
| MS.gene49733.t1 | AT3G23160 | 31.724 | 145 | 87 | 3 | 373 | 513 | 361 | 497 | 2.01e-13 | 73.6 |
Find 113 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATAGTGTTCTTCCTTCT+TGG | 0.214550 | 4.4:+7675916 | None:intergenic |
| TTGCTGATGGTTCGAATAAA+TGG | 0.240623 | 4.4:+7671115 | None:intergenic |
| AGTGCTTAACCTGCTTCTTT+TGG | 0.267827 | 4.4:+7671749 | None:intergenic |
| TGCAGAGCGCATCACGGTTT+TGG | 0.282124 | 4.4:-7669813 | MS.gene49733:intron |
| GGACTTTGACAGTCTGAAAA+TGG | 0.283201 | 4.4:-7669335 | MS.gene49733:CDS |
| AGATTTAGTATCAAAGGATA+TGG | 0.300423 | 4.4:-7673921 | MS.gene49733:CDS |
| GGGTGTGGATAGTAAGAAAA+AGG | 0.306250 | 4.4:-7675822 | MS.gene49733:CDS |
| GGCTACCTCCTCCAAACTTC+TGG | 0.310516 | 4.4:+7671705 | None:intergenic |
| TCTGATGAGGTGATTCGTTT+TGG | 0.312370 | 4.4:-7673743 | MS.gene49733:CDS |
| AACATGAAATGTAGGTAATT+TGG | 0.317265 | 4.4:+7670523 | None:intergenic |
| GTCACTCTGGTCCAGAAGTT+TGG | 0.335880 | 4.4:-7671716 | MS.gene49733:CDS |
| AGTGTATCCCTTGTATTTGC+AGG | 0.358116 | 4.4:+7670587 | None:intergenic |
| AGCATGACAAATTTAAATTC+TGG | 0.359223 | 4.4:-7674106 | MS.gene49733:CDS |
| CTAGGCAGAGCTGGCACTAT+TGG | 0.364186 | 4.4:-7674169 | MS.gene49733:CDS |
| CAAGTCTACAAAAGGTAATA+AGG | 0.364781 | 4.4:-7675945 | MS.gene49733:CDS |
| AGGATATGGACGAACTTCTA+AGG | 0.365311 | 4.4:-7673907 | MS.gene49733:CDS |
| TCTGGCGGTGGCTTTGCATA+TGG | 0.369637 | 4.4:-7674088 | MS.gene49733:CDS |
| AGTAACAAGATTCCTGTTAG+AGG | 0.372855 | 4.4:-7669379 | MS.gene49733:CDS |
| TCTCTTGTGGCTTCACCGCT+TGG | 0.373772 | 4.4:-7669554 | MS.gene49733:CDS |
| CACTATGGTAATCATAAATC+TGG | 0.382794 | 4.4:-7675902 | MS.gene49733:CDS |
| ATACCATGAGTTACATGCTT+TGG | 0.387151 | 4.4:-7672232 | MS.gene49733:CDS |
| AGAAGAGGTGCTTAAGTTAG+AGG | 0.388917 | 4.4:-7673951 | MS.gene49733:CDS |
| GCCCTGCAGGACCCAATCTT+TGG | 0.389603 | 4.4:+7671089 | None:intergenic |
| CATCAGCAATCGCCAAAGAT+TGG | 0.396750 | 4.4:-7671101 | MS.gene49733:CDS |
| AGAGCTGGCACTATTGGATT+CGG | 0.398439 | 4.4:-7674163 | MS.gene49733:CDS |
| CGCCAAAGATTGGGTCCTGC+AGG | 0.405769 | 4.4:-7671091 | MS.gene49733:CDS |
| TGGTTCGAATAAATGGTTTA+CGG | 0.411166 | 4.4:+7671122 | None:intergenic |
| AGGAATGATGATTTCTATGA+TGG | 0.418073 | 4.4:-7675758 | MS.gene49733:CDS |
| TACTTACTAGAGTATCCATT+TGG | 0.418537 | 4.4:+7671038 | None:intergenic |
| TTGGAGATAAATAAAGCCTT+TGG | 0.420581 | 4.4:-7671431 | MS.gene49733:CDS |
| GTTGGAGAGTGGGCAAGCAC+TGG | 0.422682 | 4.4:-7669786 | MS.gene49733:CDS |
| TTGGCTGTGTTTGTAGCAAT+TGG | 0.429155 | 4.4:+7669958 | None:intergenic |
| TGTATTTGCAGGCATAGAAC+TGG | 0.429803 | 4.4:+7670598 | None:intergenic |
| CGATAGTCTGTCAATCTTGA+AGG | 0.439047 | 4.4:-7671785 | MS.gene49733:CDS |
| GAGCTGGCACTATTGGATTC+GGG | 0.443156 | 4.4:-7674162 | MS.gene49733:CDS |
| GAATAGTCCCATATATTATC+TGG | 0.443168 | 4.4:+7669153 | None:intergenic |
| CTTGTGGCTTCACCGCTTGG+CGG | 0.452374 | 4.4:-7669551 | MS.gene49733:CDS |
| CACTGTAGCAGATATTAAAC+AGG | 0.455035 | 4.4:-7670010 | MS.gene49733:CDS |
| CAATCTTTGGCGATTGCTGA+TGG | 0.459530 | 4.4:+7671102 | None:intergenic |
| TGCAAATATAGTGCTCCAAA+TGG | 0.466071 | 4.4:-7671053 | MS.gene49733:CDS |
| ATCAGCAATCGCCAAAGATT+GGG | 0.466852 | 4.4:-7671100 | MS.gene49733:CDS |
| CTTTGTTCCAAGTCTACAAA+AGG | 0.469105 | 4.4:-7675953 | MS.gene49733:CDS |
| TGCAGGCATAGAACTGGATC+TGG | 0.477034 | 4.4:+7670604 | None:intergenic |
| AATAAAGCCTTTGGCAGTGC+AGG | 0.481849 | 4.4:-7671422 | MS.gene49733:intron |
| GATCATTAAAAGTAAAAGCT+TGG | 0.481852 | 4.4:-7669356 | MS.gene49733:CDS |
| TACATTTCATGTTGCAGAAG+AGG | 0.484223 | 4.4:-7670513 | MS.gene49733:intron |
| GGATCCTCAGTGGCACAACT+TGG | 0.485426 | 4.4:-7673708 | MS.gene49733:CDS |
| GCATATGGAGCTGTAACAAA+GGG | 0.491949 | 4.4:-7674073 | MS.gene49733:CDS |
| AGTTCACGCCTAGGCAGAGC+TGG | 0.493448 | 4.4:-7674178 | MS.gene49733:CDS |
| CCGCTTGGCGGTCAAAAGTA+AGG | 0.494542 | 4.4:-7669539 | MS.gene49733:CDS |
| GTTCTATGCCTGCAAATACA+AGG | 0.505891 | 4.4:-7670595 | MS.gene49733:CDS |
| TGTCAAGGGCTTTAGTCTCA+TGG | 0.508920 | 4.4:-7674008 | MS.gene49733:CDS |
| AAGACAAGCTGCTGTTGCTA+AGG | 0.512156 | 4.4:-7675684 | MS.gene49733:intron |
| GACTTCTCCAACATCACCTC+CGG | 0.514412 | 4.4:+7669516 | None:intergenic |
| ACTTAGAAGCCAAAAGAAGC+AGG | 0.515237 | 4.4:-7671758 | MS.gene49733:CDS |
| TCTTCTGCAACATGAAATGT+AGG | 0.515563 | 4.4:+7670515 | None:intergenic |
| AGTAAGGCCGGAGGTGATGT+TGG | 0.515673 | 4.4:-7669523 | MS.gene49733:CDS |
| TAATGCAAAGAGAGCCCTGC+AGG | 0.516772 | 4.4:+7671076 | None:intergenic |
| AGCAGATATTAAACAGGAGA+TGG | 0.519050 | 4.4:-7670004 | MS.gene49733:CDS |
| GATGAGTTTAGTTCAACATA+CGG | 0.524002 | 4.4:-7673493 | MS.gene49733:CDS |
| TTGGTGTTGCTGCAGAAACT+AGG | 0.524480 | 4.4:-7675778 | MS.gene49733:CDS |
| ACCAAGAAGGAAGAACACTA+TGG | 0.524865 | 4.4:-7675917 | MS.gene49733:CDS |
| TCACCATGCAGATAAAGAAA+AGG | 0.528930 | 4.4:-7669599 | MS.gene49733:CDS |
| TATTAAACATTTGAAAGAAG+AGG | 0.530195 | 4.4:-7673966 | MS.gene49733:CDS |
| TGTTCAAGATTTAGTATCAA+AGG | 0.536250 | 4.4:-7673927 | MS.gene49733:CDS |
| GTAACAAAGGGGAACGAAGT+TGG | 0.536469 | 4.4:-7674061 | MS.gene49733:CDS |
| GGTAATCATAAATCTGGTGT+TGG | 0.537321 | 4.4:-7675896 | MS.gene49733:CDS |
| TGCTCATCGGTTGTTAGCAA+TGG | 0.540892 | 4.4:+7669421 | None:intergenic |
| CAATAGTGCCAGCTCTGCCT+AGG | 0.543379 | 4.4:+7674170 | None:intergenic |
| TTGGAGAGTGGGCAAGCACT+GGG | 0.543558 | 4.4:-7669785 | MS.gene49733:intron |
| TGCATATGGAGCTGTAACAA+AGG | 0.543642 | 4.4:-7674074 | MS.gene49733:CDS |
| TGTTTCAATCCGCATTACTT+CGG | 0.546642 | 4.4:+7669624 | None:intergenic |
| GACAAGTGCAAAGGAGGGTG+TGG | 0.549385 | 4.4:-7675837 | MS.gene49733:CDS |
| ACAAATTTAAATTCTGGCGG+TGG | 0.549754 | 4.4:-7674100 | MS.gene49733:CDS |
| TGATTTGACAAGTGCAAAGG+AGG | 0.552376 | 4.4:-7675843 | MS.gene49733:CDS |
| CTTCAGCATGATCTGCTCAT+CGG | 0.555626 | 4.4:+7669408 | None:intergenic |
| ATATTCTTGAACTTCTCTTG+TGG | 0.555712 | 4.4:-7669567 | MS.gene49733:CDS |
| TCAAAGACAAACAAAAGAAG+AGG | 0.561166 | 4.4:-7673538 | MS.gene49733:CDS |
| TATCCAAAGCATGTAACTCA+TGG | 0.568232 | 4.4:+7672229 | None:intergenic |
| TAATAAGGCTTTAACCAAGA+AGG | 0.570936 | 4.4:-7675930 | MS.gene49733:CDS |
| TTGGCGGTCAAAAGTAAGGC+CGG | 0.572795 | 4.4:-7669535 | MS.gene49733:CDS |
| GGTTGCAAACACTATTGTCA+AGG | 0.574498 | 4.4:-7674023 | MS.gene49733:CDS |
| GGAATGATGATTTCTATGAT+GGG | 0.579366 | 4.4:-7675757 | MS.gene49733:CDS |
| ACTCTGGTCCAGAAGTTTGG+AGG | 0.584664 | 4.4:-7671713 | MS.gene49733:CDS |
| GTTGACGTTCTAGACACACT+TGG | 0.587915 | 4.4:-7674133 | MS.gene49733:CDS |
| GTATATACCTGCACTGCCAA+AGG | 0.592690 | 4.4:+7671415 | None:intergenic |
| GTAACAAGATTCCTGTTAGA+GGG | 0.600949 | 4.4:-7669378 | MS.gene49733:CDS |
| ACTTGAAGAAGAAGTCACTC+TGG | 0.601104 | 4.4:-7671729 | MS.gene49733:CDS |
| CGATGAGCAGATCATGCTGA+AGG | 0.606428 | 4.4:-7669407 | MS.gene49733:CDS |
| TAGTGATTTGACAAGTGCAA+AGG | 0.607913 | 4.4:-7675846 | MS.gene49733:CDS |
| GTTGCAAACACTATTGTCAA+GGG | 0.609003 | 4.4:-7674022 | MS.gene49733:CDS |
| GGATTGTTGCTGCAGACAAG+AGG | 0.610168 | 4.4:-7673886 | MS.gene49733:intron |
| CTCAACGACAAGTAGAAGCA+AGG | 0.611322 | 4.4:-7669272 | MS.gene49733:CDS |
| CTGGTCCAGAAGTTTGGAGG+AGG | 0.611782 | 4.4:-7671710 | MS.gene49733:intron |
| TTGACGTTCTAGACACACTT+GGG | 0.616300 | 4.4:-7674132 | MS.gene49733:CDS |
| GCCAAAGATTGGGTCCTGCA+GGG | 0.618606 | 4.4:-7671090 | MS.gene49733:CDS |
| ATGACAAATTTAAATTCTGG+CGG | 0.623658 | 4.4:-7674103 | MS.gene49733:CDS |
| GCCTAGGCGTGAACTCACCT+CGG | 0.624055 | 4.4:+7674186 | None:intergenic |
| TCAGCATAAGCGTGATGAGG+AGG | 0.627680 | 4.4:-7672190 | MS.gene49733:CDS |
| TCTGTCATAAAGTCTCATGT+TGG | 0.633215 | 4.4:-7669490 | MS.gene49733:CDS |
| GATTTGACAAGTGCAAAGGA+GGG | 0.634502 | 4.4:-7675842 | MS.gene49733:CDS |
| TTCTATGCCTGCAAATACAA+GGG | 0.637331 | 4.4:-7670594 | MS.gene49733:CDS |
| CTTTCTATTTCAGGTCTCCG+AGG | 0.639149 | 4.4:-7674203 | MS.gene49733:intron |
| TCCGAGGTGAGTTCACGCCT+AGG | 0.646167 | 4.4:-7674187 | MS.gene49733:CDS |
| CGATCCAAGTTGTGCCACTG+AGG | 0.655867 | 4.4:+7673704 | None:intergenic |
| CTATGAAGACCGAAGTAATG+CGG | 0.659298 | 4.4:-7669633 | MS.gene49733:CDS |
| TTATCAGCATAAGCGTGATG+AGG | 0.663554 | 4.4:-7672193 | MS.gene49733:CDS |
| AATTGATGCAGAGCGCATCA+CGG | 0.675237 | 4.4:-7669819 | MS.gene49733:intron |
| GCGGTCAAAAGTAAGGCCGG+AGG | 0.707260 | 4.4:-7669532 | MS.gene49733:CDS |
| CATATGGAGCTGTAACAAAG+GGG | 0.707348 | 4.4:-7674072 | MS.gene49733:CDS |
| ATCGGTCAAAGGATCCTCAG+TGG | 0.720581 | 4.4:-7673718 | MS.gene49733:CDS |
| AATTCAAGTGCAGCTCAAAG+CGG | 0.724106 | 4.4:-7672165 | MS.gene49733:intron |
| GAGTTTAGTTCAACATACGG+CGG | 0.743997 | 4.4:-7673490 | MS.gene49733:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTAAAAAATTAATTAA+AGG | - | chr4.4:7674181-7674200 | MS.gene49733:CDS | 0.0% |
| !! | AAAAAATTAATTAAAGGAAT+AGG | - | chr4.4:7674187-7674206 | MS.gene49733:CDS | 10.0% |
| !! | ATATGGATATATTTATAATT+TGG | - | chr4.4:7670802-7670821 | MS.gene49733:intron | 10.0% |
| !! | TATGGATATATTTATAATTT+GGG | - | chr4.4:7670803-7670822 | MS.gene49733:intron | 10.0% |
| !! | TTTCTAATTTAATGTTAATT+TGG | - | chr4.4:7673077-7673096 | MS.gene49733:intron | 10.0% |
| !!! | AAATTTTTCATAAAATCTTA+TGG | + | chr4.4:7672717-7672736 | None:intergenic | 10.0% |
| !! | AAAATTTACAACAAAAATAC+TGG | + | chr4.4:7671549-7671568 | None:intergenic | 15.0% |
| !! | AATTGAAAAATCTTTCTTTA+TGG | - | chr4.4:7672864-7672883 | MS.gene49733:intron | 15.0% |
| !! | ATGGATATATTTATAATTTG+GGG | - | chr4.4:7670804-7670823 | MS.gene49733:intron | 15.0% |
| !! | TACAATAATATAGAATATGT+TGG | + | chr4.4:7670598-7670617 | None:intergenic | 15.0% |
| !!! | AAAGTTAATTTTATATTAGG+AGG | + | chr4.4:7674582-7674601 | None:intergenic | 15.0% |
| !!! | AATTTGGATCTTAATATTTT+TGG | + | chr4.4:7673048-7673067 | None:intergenic | 15.0% |
| !!! | ATTATAAAAGATGCAATTTT+AGG | + | chr4.4:7669823-7669842 | None:intergenic | 15.0% |
| !!! | CCATTTAAATAGTTTTTTTT+GGG | - | chr4.4:7671751-7671770 | MS.gene49733:CDS | 15.0% |
| !!! | TAATATGTTTTTCTAGTTTT+TGG | - | chr4.4:7673879-7673898 | MS.gene49733:intron | 15.0% |
| !!! | TCATTTTTAACATTTGTAAA+AGG | + | chr4.4:7674667-7674686 | None:intergenic | 15.0% |
| !!! | TCCATTTAAATAGTTTTTTT+TGG | - | chr4.4:7671750-7671769 | MS.gene49733:CDS | 15.0% |
| !!! | TTAGAAATTTTCACAAAATT+TGG | + | chr4.4:7673064-7673083 | None:intergenic | 15.0% |
| !! | AAACATTTGAAAACAGTATA+GGG | - | chr4.4:7673258-7673277 | MS.gene49733:intron | 20.0% |
| !! | AACACAATTAAAAAAAACTG+CGG | + | chr4.4:7675059-7675078 | None:intergenic | 20.0% |
| !! | ACTAGAAAAACATATTAACA+AGG | + | chr4.4:7673876-7673895 | None:intergenic | 20.0% |
| !! | ATAAAAAGATATTTCCACTT+CGG | + | chr4.4:7671895-7671914 | None:intergenic | 20.0% |
| !! | CCCAAAAAAAACTATTTAAA+TGG | + | chr4.4:7671754-7671773 | None:intergenic | 20.0% |
| !! | GTCAGAACAAAAATAATAAA+AGG | + | chr4.4:7671527-7671546 | None:intergenic | 20.0% |
| !! | TAAACATTTGAAAACAGTAT+AGG | - | chr4.4:7673257-7673276 | MS.gene49733:intron | 20.0% |
| !! | TATACATGGATAAATTACTA+TGG | + | chr4.4:7673523-7673542 | None:intergenic | 20.0% |
| !! | TATCCATATATCTTAAACAT+TGG | + | chr4.4:7670791-7670810 | None:intergenic | 20.0% |
| !! | TATTAAACATTTGAAAGAAG+AGG | - | chr4.4:7671164-7671183 | MS.gene49733:intron | 20.0% |
| !! | TTCATTACCTAATAATTTAC+AGG | - | chr4.4:7673638-7673657 | MS.gene49733:intron | 20.0% |
| !!! | AATCAAACAAGAATTTTGAA+GGG | + | chr4.4:7675450-7675469 | None:intergenic | 20.0% |
| !!! | AATTCTAGAGATTAATAAGT+TGG | + | chr4.4:7672189-7672208 | None:intergenic | 20.0% |
| !!! | ATGGAAGTATAAAAACATAT+AGG | + | chr4.4:7673504-7673523 | None:intergenic | 20.0% |
| !!! | CGCAAAGTTAATTTTATATT+AGG | + | chr4.4:7674585-7674604 | None:intergenic | 20.0% |
| !!! | CTTATTCTTTTTCTTTTGTT+TGG | - | chr4.4:7675279-7675298 | MS.gene49733:intron | 20.0% |
| !!! | TGGAAGTATAAAAACATATA+GGG | + | chr4.4:7673503-7673522 | None:intergenic | 20.0% |
| !!! | TTACGAAAAGGTAATTTTTT+CGG | + | chr4.4:7671919-7671938 | None:intergenic | 20.0% |
| !!! | TTCATTCAACTTTTATTTTG+TGG | - | chr4.4:7672824-7672843 | MS.gene49733:intron | 20.0% |
| !!! | TTTATTGATCATTTGATGAT+TGG | - | chr4.4:7674265-7674284 | MS.gene49733:intron | 20.0% |
| !!! | TTTTGACAAAAATTACGAAA+AGG | + | chr4.4:7671931-7671950 | None:intergenic | 20.0% |
| ! | AAAAGTAGGAGCAAAAAATA+AGG | + | chr4.4:7675422-7675441 | None:intergenic | 25.0% |
| ! | AAAATAACCAACAGTGAAAA+TGG | + | chr4.4:7670382-7670401 | None:intergenic | 25.0% |
| ! | AAAGTAGGAGCAAAAAATAA+GGG | + | chr4.4:7675421-7675440 | None:intergenic | 25.0% |
| ! | AAATAACCAACAGTGAAAAT+GGG | + | chr4.4:7670381-7670400 | None:intergenic | 25.0% |
| ! | AACATGAAATGTAGGTAATT+TGG | + | chr4.4:7674610-7674629 | None:intergenic | 25.0% |
| ! | AAGAAGAAAAATGTAACATG+TGG | + | chr4.4:7670414-7670433 | None:intergenic | 25.0% |
| ! | AAGGTTCAAAATACTCAAAA+AGG | - | chr4.4:7674861-7674880 | MS.gene49733:intron | 25.0% |
| ! | AAGTATAAAAACATATAGGG+TGG | + | chr4.4:7673500-7673519 | None:intergenic | 25.0% |
| ! | AATTAAAGGAATAGGTAACT+AGG | - | chr4.4:7674195-7674214 | MS.gene49733:intron | 25.0% |
| ! | AATTTATCCATGTATAATGC+TGG | - | chr4.4:7673527-7673546 | MS.gene49733:CDS | 25.0% |
| ! | ACCTAATAATTTACAGGTTA+TGG | - | chr4.4:7673644-7673663 | MS.gene49733:intron | 25.0% |
| ! | ACTGTAATTATTTCCTAACA+TGG | - | chr4.4:7674125-7674144 | MS.gene49733:CDS | 25.0% |
| ! | AGATTTAGTATCAAAGGATA+TGG | - | chr4.4:7671209-7671228 | MS.gene49733:intron | 25.0% |
| ! | AGCATGACAAATTTAAATTC+TGG | - | chr4.4:7671024-7671043 | MS.gene49733:intron | 25.0% |
| ! | AGGTTCAAAATACTCAAAAA+GGG | - | chr4.4:7674862-7674881 | MS.gene49733:intron | 25.0% |
| ! | ATACTGATAAAACAAACTCT+TGG | + | chr4.4:7674158-7674177 | None:intergenic | 25.0% |
| ! | ATGAAAAACTGAGAAAATAG+TGG | - | chr4.4:7674683-7674702 | MS.gene49733:intron | 25.0% |
| ! | ATGACAAATTTAAATTCTGG+CGG | - | chr4.4:7671027-7671046 | MS.gene49733:intron | 25.0% |
| ! | ATGATAAACTCAGAGAAATT+AGG | + | chr4.4:7670732-7670751 | None:intergenic | 25.0% |
| ! | ATTGAGTTTAGATAGATAGA+GGG | - | chr4.4:7669782-7669801 | MS.gene49733:intron | 25.0% |
| ! | CAAAAAATAAGGGAAAAAAG+TGG | + | chr4.4:7675411-7675430 | None:intergenic | 25.0% |
| ! | GATCATTAAAAGTAAAAGCT+TGG | - | chr4.4:7675774-7675793 | MS.gene49733:CDS | 25.0% |
| ! | GTATAGGGTAATATTTCTTT+AGG | - | chr4.4:7673273-7673292 | MS.gene49733:intron | 25.0% |
| ! | TATTTATAATTTGGGGATCA+AGG | - | chr4.4:7670811-7670830 | MS.gene49733:intron | 25.0% |
| ! | TCAATACAAAAATCAATCAC+AGG | + | chr4.4:7675916-7675935 | None:intergenic | 25.0% |
| ! | TCCATAACCTGTAAATTATT+AGG | + | chr4.4:7673648-7673667 | None:intergenic | 25.0% |
| ! | TGATAAACTCAGAGAAATTA+GGG | + | chr4.4:7670731-7670750 | None:intergenic | 25.0% |
| ! | TGATATATGATAGAATATCG+TGG | + | chr4.4:7672157-7672176 | None:intergenic | 25.0% |
| ! | TGTTCAAGATTTAGTATCAA+AGG | - | chr4.4:7671203-7671222 | MS.gene49733:intron | 25.0% |
| ! | TTGAATCATCAAATTACTCT+TGG | - | chr4.4:7673913-7673932 | MS.gene49733:CDS | 25.0% |
| ! | TTTGAAGGGAAAAAAAAAGT+AGG | + | chr4.4:7675436-7675455 | None:intergenic | 25.0% |
| !! | ACTTATTTGAGTTTATGTAC+CGG | - | chr4.4:7669551-7669570 | MS.gene49733:CDS | 25.0% |
| !! | ATTGTTTATTTGTCTTTTGC+AGG | + | chr4.4:7675672-7675691 | None:intergenic | 25.0% |
| !! | CAATCAAACAAGAATTTTGA+AGG | + | chr4.4:7675451-7675470 | None:intergenic | 25.0% |
| !! | GAACCAATGTTTAAGATATA+TGG | - | chr4.4:7670785-7670804 | MS.gene49733:intron | 25.0% |
| !! | GTTATATTGATAACTGATGA+TGG | + | chr4.4:7673811-7673830 | None:intergenic | 25.0% |
| !! | TTTTAACAGAATTCTCACTA+AGG | - | chr4.4:7675888-7675907 | MS.gene49733:CDS | 25.0% |
| !!! | ACTGAAAGTTAGTTTGTTAA+TGG | + | chr4.4:7671299-7671318 | None:intergenic | 25.0% |
| !!! | ATTATTCATTAGTGCTGATT+TGG | - | chr4.4:7670515-7670534 | MS.gene49733:CDS | 25.0% |
| !!! | ATTCTTTTTCACATAAGTCT+AGG | - | chr4.4:7669412-7669431 | MS.gene49733:CDS | 25.0% |
| !!! | ATTGAAAGTATTTTCTGATG+AGG | - | chr4.4:7671374-7671393 | MS.gene49733:intron | 25.0% |
| !!! | TGTTTTTTGTTTTTTCCATG+TGG | - | chr4.4:7675075-7675094 | MS.gene49733:intron | 25.0% |
| AAAAATGTAACATGTGGTTG+TGG | + | chr4.4:7670408-7670427 | None:intergenic | 30.0% | |
| AAAGTAACAGAAAAGATAGG+AGG | + | chr4.4:7670358-7670377 | None:intergenic | 30.0% | |
| AAATACTTTCAATTCATCCC+TGG | + | chr4.4:7671367-7671386 | None:intergenic | 30.0% | |
| AAATCTTTCTTTATGGTCTC+AGG | - | chr4.4:7672871-7672890 | MS.gene49733:intron | 30.0% | |
| AAATGATAACATTGGAGACA+GGG | + | chr4.4:7672382-7672401 | None:intergenic | 30.0% | |
| AAATTTCTGAACCAAGTGAA+AGG | - | chr4.4:7670863-7670882 | MS.gene49733:intron | 30.0% | |
| AACTGAGAAAATAGTGGTTT+AGG | - | chr4.4:7674689-7674708 | MS.gene49733:intron | 30.0% | |
| AAGACCTAAAAAGACTATAC+GGG | + | chr4.4:7672223-7672242 | None:intergenic | 30.0% | |
| AATGAAAACAGTCCAGAAAA+AGG | - | chr4.4:7670691-7670710 | MS.gene49733:intron | 30.0% | |
| AATTTCTGAACCAAGTGAAA+GGG | - | chr4.4:7670864-7670883 | MS.gene49733:intron | 30.0% | |
| ACTTAGTAAGATCAGCTATA+TGG | - | chr4.4:7672121-7672140 | MS.gene49733:intron | 30.0% | |
| AGATGGAAAAAACATTGCAT+TGG | - | chr4.4:7675143-7675162 | MS.gene49733:intron | 30.0% | |
| AGCAATTGGGAATGAAATTT+CGG | - | chr4.4:7669873-7669892 | MS.gene49733:intron | 30.0% | |
| AGCAGAACTATAGAGAAAAT+GGG | + | chr4.4:7672047-7672066 | None:intergenic | 30.0% | |
| AGGAATGATGATTTCTATGA+TGG | - | chr4.4:7669372-7669391 | MS.gene49733:CDS | 30.0% | |
| AGGAGTAGAAATGATAACAT+TGG | + | chr4.4:7672390-7672409 | None:intergenic | 30.0% | |
| AGGTAGTAACGAAAATCTTA+TGG | + | chr4.4:7674928-7674947 | None:intergenic | 30.0% | |
| ATAGGAACTTGGATATTATG+GGG | - | chr4.4:7670124-7670143 | MS.gene49733:intron | 30.0% | |
| ATATAGCTGATCTTACTAAG+TGG | + | chr4.4:7672122-7672141 | None:intergenic | 30.0% | |
| ATATTCTTGAACTTCTCTTG+TGG | - | chr4.4:7675563-7675582 | MS.gene49733:intron | 30.0% | |
| ATGAAAACAGTCCAGAAAAA+GGG | - | chr4.4:7670692-7670711 | MS.gene49733:intron | 30.0% | |
| CAAGTCTACAAAAGGTAATA+AGG | - | chr4.4:7669185-7669204 | MS.gene49733:CDS | 30.0% | |
| CACTATGGTAATCATAAATC+TGG | - | chr4.4:7669228-7669247 | MS.gene49733:CDS | 30.0% | |
| CCAAAAAGAATATGCAAATC+AGG | + | chr4.4:7673171-7673190 | None:intergenic | 30.0% | |
| CCTAAAAATCTAGCTATCAA+GGG | + | chr4.4:7670215-7670234 | None:intergenic | 30.0% | |
| CTAAAAATCTAGCTATCAAG+GGG | + | chr4.4:7670214-7670233 | None:intergenic | 30.0% | |
| CTATAACTGTAGAATGTACA+AGG | - | chr4.4:7674842-7674861 | MS.gene49733:intron | 30.0% | |
| CTATGAAACAAACAAGAGAA+TGG | + | chr4.4:7669486-7669505 | None:intergenic | 30.0% | |
| GAAGACCTAAAAAGACTATA+CGG | + | chr4.4:7672224-7672243 | None:intergenic | 30.0% | |
| GACTAATGTCTTTCTATTTC+AGG | - | chr4.4:7670918-7670937 | MS.gene49733:intron | 30.0% | |
| GATAGGAACTTGGATATTAT+GGG | - | chr4.4:7670123-7670142 | MS.gene49733:intron | 30.0% | |
| GATTGAGTTTAGATAGATAG+AGG | - | chr4.4:7669781-7669800 | MS.gene49733:intron | 30.0% | |
| GCTAAATGGGAAAGATTATT+TGG | + | chr4.4:7670026-7670045 | None:intergenic | 30.0% | |
| GGAATGATGATTTCTATGAT+GGG | - | chr4.4:7669373-7669392 | MS.gene49733:CDS | 30.0% | |
| GTGCTTATGGAAATAGTTTA+TGG | - | chr4.4:7669598-7669617 | MS.gene49733:CDS | 30.0% | |
| GTGTTACACAATAAACAGAA+AGG | - | chr4.4:7670308-7670327 | MS.gene49733:intron | 30.0% | |
| TAGAAAAGAATGTGGAAACT+TGG | + | chr4.4:7672341-7672360 | None:intergenic | 30.0% | |
| TAGAGTACAAACTGCTAAAT+GGG | + | chr4.4:7670039-7670058 | None:intergenic | 30.0% | |
| TAGCAGAACTATAGAGAAAA+TGG | + | chr4.4:7672048-7672067 | None:intergenic | 30.0% | |
| TATAGCTGATCTTACTAAGT+GGG | + | chr4.4:7672121-7672140 | None:intergenic | 30.0% | |
| TCAAAGACAAACAAAAGAAG+AGG | - | chr4.4:7671592-7671611 | MS.gene49733:intron | 30.0% | |
| TGATAGGAACTTGGATATTA+TGG | - | chr4.4:7670122-7670141 | MS.gene49733:intron | 30.0% | |
| TGCTCAAAATTAATCAACCT+CGG | + | chr4.4:7673588-7673607 | None:intergenic | 30.0% | |
| TGGTTCGAATAAATGGTTTA+CGG | + | chr4.4:7674011-7674030 | None:intergenic | 30.0% | |
| TGTACAATTGGAATGAAGTT+TGG | + | chr4.4:7670081-7670100 | None:intergenic | 30.0% | |
| TTATCATACAGCTGTAAGAT+TGG | + | chr4.4:7672524-7672543 | None:intergenic | 30.0% | |
| TTATCTCCAAATGCAAAAAG+TGG | + | chr4.4:7673689-7673708 | None:intergenic | 30.0% | |
| TTGCATGTCAATTGAATAGA+GGG | - | chr4.4:7672007-7672026 | MS.gene49733:intron | 30.0% | |
| TTGGAGATAAATAAAGCCTT+TGG | - | chr4.4:7673699-7673718 | MS.gene49733:CDS | 30.0% | |
| TTGTCAAAATGTACTGTTGA+GGG | - | chr4.4:7671942-7671961 | MS.gene49733:intron | 30.0% | |
| TTTGTCAAAATGTACTGTTG+AGG | - | chr4.4:7671941-7671960 | MS.gene49733:intron | 30.0% | |
| ! | AAATCGAATGGATAGCTTTT+GGG | - | chr4.4:7669926-7669945 | MS.gene49733:intron | 30.0% |
| ! | AAGCTTGTGTTCATTTTGTT+AGG | - | chr4.4:7674500-7674519 | MS.gene49733:intron | 30.0% |
| ! | AAGGCTGAAATTTGTTTCTT+TGG | + | chr4.4:7673857-7673876 | None:intergenic | 30.0% |
| ! | ATTTTCGTTACTACCTTAGT+AGG | - | chr4.4:7674932-7674951 | MS.gene49733:intron | 30.0% |
| ! | ATTTTGCTTCATAACTGCAA+TGG | - | chr4.4:7673958-7673977 | MS.gene49733:CDS | 30.0% |
| ! | CTCTCTTATTTCAAATCGAA+TGG | - | chr4.4:7669914-7669933 | MS.gene49733:intron | 30.0% |
| ! | CTTATTACCTTTTGTAGACT+TGG | + | chr4.4:7669187-7669206 | None:intergenic | 30.0% |
| ! | GATGAGTTTAGTTCAACATA+CGG | - | chr4.4:7671637-7671656 | MS.gene49733:intron | 30.0% |
| ! | TAATAAGGCTTTAACCAAGA+AGG | - | chr4.4:7669200-7669219 | MS.gene49733:CDS | 30.0% |
| ! | TACTTACTAGAGTATCCATT+TGG | + | chr4.4:7674095-7674114 | None:intergenic | 30.0% |
| ! | TATTCCCGTATAGTCTTTTT+AGG | - | chr4.4:7672216-7672235 | MS.gene49733:CDS | 30.0% |
| ! | TATTGACAAAAAGAGAGCAT+TGG | - | chr4.4:7675930-7675949 | MS.gene49733:CDS | 30.0% |
| ! | TTTATGAAAGCACAAAGAGA+TGG | - | chr4.4:7673195-7673214 | MS.gene49733:intron | 30.0% |
| ! | TTTTGCTTCATAACTGCAAT+GGG | - | chr4.4:7673959-7673978 | MS.gene49733:CDS | 30.0% |
| !! | AATGCAAGGATTGATTTTTG+AGG | - | chr4.4:7669959-7669978 | MS.gene49733:CDS | 30.0% |
| !! | ACTTCGTTTTATTCTCGTAT+TGG | - | chr4.4:7672461-7672480 | MS.gene49733:intron | 30.0% |
| !! | CCTGATTTGCATATTCTTTT+TGG | - | chr4.4:7673168-7673187 | MS.gene49733:intron | 30.0% |
| !! | CCTTGATAGCTAGATTTTTA+GGG | - | chr4.4:7670213-7670232 | MS.gene49733:intron | 30.0% |
| !! | TTATTTTTCCATGCATTGCA+AGG | + | chr4.4:7671504-7671523 | None:intergenic | 30.0% |
| !!! | AGGATTGATTTTTGAGGTTT+TGG | - | chr4.4:7669965-7669984 | MS.gene49733:CDS | 30.0% |
| !!! | GACTCTAAGATGTTTTTTAC+TGG | - | chr4.4:7673562-7673581 | MS.gene49733:CDS | 30.0% |
| !!! | GTTGTTTTTGAATTATGAGC+TGG | - | chr4.4:7669849-7669868 | MS.gene49733:intron | 30.0% |
| !!! | TGATTTTTGAGGTTTTGGAA+TGG | - | chr4.4:7669970-7669989 | MS.gene49733:CDS | 30.0% |
| AAGTTCCTATCAGATTCTTG+AGG | + | chr4.4:7670114-7670133 | None:intergenic | 35.0% | |
| AATAAGCCGAAAACAGCTTA+TGG | + | chr4.4:7669629-7669648 | None:intergenic | 35.0% | |
| AATTATGAGCTGGAAGCAAT+TGG | - | chr4.4:7669859-7669878 | MS.gene49733:intron | 35.0% | |
| ACAAATTTAAATTCTGGCGG+TGG | - | chr4.4:7671030-7671049 | MS.gene49733:intron | 35.0% | |
| ACCTATCGTAGAAAAGAATG+TGG | + | chr4.4:7672349-7672368 | None:intergenic | 35.0% | |
| ACTAGTTCCAGCATTATACA+TGG | + | chr4.4:7673537-7673556 | None:intergenic | 35.0% | |
| ACTGTCTCTCTTCATCATAT+AGG | - | chr4.4:7673322-7673341 | MS.gene49733:intron | 35.0% | |
| AGCAGATATTAAACAGGAGA+TGG | - | chr4.4:7675126-7675145 | MS.gene49733:intron | 35.0% | |
| AGTAACAAGATTCCTGTTAG+AGG | - | chr4.4:7675751-7675770 | MS.gene49733:CDS | 35.0% | |
| AGTAAGGAGAGTAGATCATA+TGG | + | chr4.4:7672274-7672293 | None:intergenic | 35.0% | |
| ATACCATGAGTTACATGCTT+TGG | - | chr4.4:7672898-7672917 | MS.gene49733:intron | 35.0% | |
| ATGAGAAATATCCAAGCACT+TGG | + | chr4.4:7670247-7670266 | None:intergenic | 35.0% | |
| ATGATCTACTCTCCTTACTA+CGG | - | chr4.4:7672275-7672294 | MS.gene49733:intron | 35.0% | |
| ATGATGAAGAGAGACAGTTT+GGG | + | chr4.4:7673320-7673339 | None:intergenic | 35.0% | |
| ATTATGAGCTGGAAGCAATT+GGG | - | chr4.4:7669860-7669879 | MS.gene49733:intron | 35.0% | |
| ATTGAAAGTGGAAAGGTGAA+AGG | + | chr4.4:7675034-7675053 | None:intergenic | 35.0% | |
| ATTTCTGAACCAAGTGAAAG+GGG | - | chr4.4:7670865-7670884 | MS.gene49733:intron | 35.0% | |
| CACTGTAGCAGATATTAAAC+AGG | - | chr4.4:7675120-7675139 | MS.gene49733:intron | 35.0% | |
| CCCTAAAAATCTAGCTATCA+AGG | + | chr4.4:7670216-7670235 | None:intergenic | 35.0% | |
| CTTTGTTCCAAGTCTACAAA+AGG | - | chr4.4:7669177-7669196 | MS.gene49733:CDS | 35.0% | |
| GAAATGATAACATTGGAGAC+AGG | + | chr4.4:7672383-7672402 | None:intergenic | 35.0% | |
| GGGAAAGTAACAGAAAAGAT+AGG | + | chr4.4:7670361-7670380 | None:intergenic | 35.0% | |
| GGTAATCATAAATCTGGTGT+TGG | - | chr4.4:7669234-7669253 | MS.gene49733:CDS | 35.0% | |
| GTAACAAGATTCCTGTTAGA+GGG | - | chr4.4:7675752-7675771 | MS.gene49733:CDS | 35.0% | |
| GTAGAGTACAAACTGCTAAA+TGG | + | chr4.4:7670040-7670059 | None:intergenic | 35.0% | |
| GTGCTTGGATATTTCTCATT+TGG | - | chr4.4:7670248-7670267 | MS.gene49733:intron | 35.0% | |
| GTGGTAAGATTAGACAAGAT+AGG | + | chr4.4:7672410-7672429 | None:intergenic | 35.0% | |
| GTTGCAAACACTATTGTCAA+GGG | - | chr4.4:7671108-7671127 | MS.gene49733:CDS | 35.0% | |
| GTTGCATGTCAATTGAATAG+AGG | - | chr4.4:7672006-7672025 | MS.gene49733:intron | 35.0% | |
| TAATTATTCTCGAACCGAAG+TGG | - | chr4.4:7671878-7671897 | MS.gene49733:intron | 35.0% | |
| TACATTTCATGTTGCAGAAG+AGG | - | chr4.4:7674617-7674636 | MS.gene49733:intron | 35.0% | |
| TACCAAAAATCAGAGCAAGT+TGG | + | chr4.4:7671339-7671358 | None:intergenic | 35.0% | |
| TAGTGATTTGACAAGTGCAA+AGG | - | chr4.4:7669284-7669303 | MS.gene49733:CDS | 35.0% | |
| TATCCAAAGCATGTAACTCA+TGG | + | chr4.4:7672904-7672923 | None:intergenic | 35.0% | |
| TATGATGAAGAGAGACAGTT+TGG | + | chr4.4:7673321-7673340 | None:intergenic | 35.0% | |
| TCAAATTAACCCCTTTCACT+TGG | + | chr4.4:7670877-7670896 | None:intergenic | 35.0% | |
| TCAAGAATCTGATAGGAACT+TGG | - | chr4.4:7670113-7670132 | MS.gene49733:intron | 35.0% | |
| TCACCATGCAGATAAAGAAA+AGG | - | chr4.4:7675531-7675550 | MS.gene49733:intron | 35.0% | |
| TCTAAAGACACTACAACTTC+TGG | + | chr4.4:7671705-7671724 | None:intergenic | 35.0% | |
| TCTGTCATAAAGTCTCATGT+TGG | - | chr4.4:7675640-7675659 | MS.gene49733:intron | 35.0% | |
| TCTTCTGCAACATGAAATGT+AGG | + | chr4.4:7674618-7674637 | None:intergenic | 35.0% | |
| TCTTGGAACTTAACCATGTT+AGG | + | chr4.4:7674141-7674160 | None:intergenic | 35.0% | |
| TGAGAAAATAGTGGTTTAGG+CGG | - | chr4.4:7674692-7674711 | MS.gene49733:intron | 35.0% | |
| TGATCTTACTAAGTGGGATA+AGG | + | chr4.4:7672115-7672134 | None:intergenic | 35.0% | |
| TGCAAATATAGTGCTCCAAA+TGG | - | chr4.4:7674077-7674096 | MS.gene49733:CDS | 35.0% | |
| TGTAACATGCAGTTTCTGTT+TGG | + | chr4.4:7674767-7674786 | None:intergenic | 35.0% | |
| TGTTTCAATCCGCATTACTT+CGG | + | chr4.4:7675509-7675528 | None:intergenic | 35.0% | |
| TTAAGTCGTTTATCCCAACA+AGG | - | chr4.4:7669747-7669766 | MS.gene49733:intron | 35.0% | |
| TTCAGCACATAAATCAGACA+TGG | + | chr4.4:7674468-7674487 | None:intergenic | 35.0% | |
| TTCTATGCCTGCAAATACAA+GGG | - | chr4.4:7674536-7674555 | MS.gene49733:intron | 35.0% | |
| TTGCTGATGGTTCGAATAAA+TGG | + | chr4.4:7674018-7674037 | None:intergenic | 35.0% | |
| TTGGGAATGAAATTTCGGTT+AGG | - | chr4.4:7669878-7669897 | MS.gene49733:intron | 35.0% | |
| ! | AAAACTGTGAACCCTTTTTC+TGG | + | chr4.4:7670706-7670725 | None:intergenic | 35.0% |
| ! | AATCGAATGGATAGCTTTTG+GGG | - | chr4.4:7669927-7669946 | MS.gene49733:intron | 35.0% |
| ! | CAAATCGAATGGATAGCTTT+TGG | - | chr4.4:7669925-7669944 | MS.gene49733:intron | 35.0% |
| ! | CTACCTTTTCTTTATCTGCA+TGG | + | chr4.4:7675537-7675556 | None:intergenic | 35.0% |
| ! | CTCACTCTCAATTTGAAATG+AGG | + | chr4.4:7670440-7670459 | None:intergenic | 35.0% |
| ! | CTTTTAATGATCCCTCTAAC+AGG | + | chr4.4:7675766-7675785 | None:intergenic | 35.0% |
| ! | GGAAAAAACATTGCATTGGT+TGG | - | chr4.4:7675147-7675166 | MS.gene49733:intron | 35.0% |
| ! | GTTTGTTAATGGAATCTCTG+AGG | + | chr4.4:7671288-7671307 | None:intergenic | 35.0% |
| ! | TAACATGCAACTCTTGTTTG+TGG | - | chr4.4:7673008-7673027 | MS.gene49733:intron | 35.0% |
| ! | TACTTTCCCATTTTCACTGT+TGG | - | chr4.4:7670372-7670391 | MS.gene49733:intron | 35.0% |
| ! | TCCACATTCTTTTCTACGAT+AGG | - | chr4.4:7672345-7672364 | MS.gene49733:intron | 35.0% |
| ! | TGTTTTCGTGTAAGCTATCA+TGG | + | chr4.4:7669664-7669683 | None:intergenic | 35.0% |
| ! | TGTTTTCTGCTGTACAATCA+AGG | - | chr4.4:7672757-7672776 | MS.gene49733:intron | 35.0% |
| !! | CCCTTGATAGCTAGATTTTT+AGG | - | chr4.4:7670212-7670231 | MS.gene49733:intron | 35.0% |
| !! | GCATATCCATAAGCTGTTTT+CGG | - | chr4.4:7669620-7669639 | MS.gene49733:CDS | 35.0% |
| !! | TAAGATTGGTGACGTTGTAT+GGG | + | chr4.4:7672510-7672529 | None:intergenic | 35.0% |
| !! | TCTTAAACATTGGTTCCTCA+TGG | + | chr4.4:7670781-7670800 | None:intergenic | 35.0% |
| !! | TGATAGCTAGATTTTTAGGG+TGG | - | chr4.4:7670216-7670235 | MS.gene49733:intron | 35.0% |
| !! | TGGATTAGTGTTACTTCCTT+TGG | + | chr4.4:7674908-7674927 | None:intergenic | 35.0% |
| !! | TTCAAGTTGGATGGTTGAAA+TGG | + | chr4.4:7672605-7672624 | None:intergenic | 35.0% |
| !!! | AGGTGATTCGTTTTGGAAAT+CGG | - | chr4.4:7671394-7671413 | MS.gene49733:intron | 35.0% |
| !!! | AGTTGGTATTTTAGCGTTTG+AGG | - | chr4.4:7671086-7671105 | MS.gene49733:CDS | 35.0% |
| !!! | CATAGTCCACTTTTTGCATT+TGG | - | chr4.4:7673680-7673699 | MS.gene49733:intron | 35.0% |
| !!! | GATAGCTAGATTTTTAGGGT+GGG | - | chr4.4:7670217-7670236 | MS.gene49733:intron | 35.0% |
| !!! | TCGTCATTTTTCTCCAAAGT+TGG | + | chr4.4:7670900-7670919 | None:intergenic | 35.0% |
| !!! | TGATTTTTGGTACGTTTCCA+GGG | - | chr4.4:7671347-7671366 | MS.gene49733:intron | 35.0% |
| AAAACTGCGGTGATTGAAAG+TGG | + | chr4.4:7675046-7675065 | None:intergenic | 40.0% | |
| AAACTTGGCTTAGGTGGTTT+GGG | + | chr4.4:7672326-7672345 | None:intergenic | 40.0% | |
| AAGGAGAGTAGATCATATGG+AGG | + | chr4.4:7672271-7672290 | None:intergenic | 40.0% | |
| AAGTTGGATGGTTGAAATGG+AGG | + | chr4.4:7672602-7672621 | None:intergenic | 40.0% | |
| AATTCAAGTGCAGCTCAAAG+CGG | - | chr4.4:7672965-7672984 | MS.gene49733:intron | 40.0% | |
| ACAAAGCCAGACATCTTACT+TGG | + | chr4.4:7675194-7675213 | None:intergenic | 40.0% | |
| ACAGAAAAGATAGGAGGTAG+TGG | + | chr4.4:7670352-7670371 | None:intergenic | 40.0% | |
| ACCAAGAAGGAAGAACACTA+TGG | - | chr4.4:7669213-7669232 | MS.gene49733:CDS | 40.0% | |
| ACCATAGTGTTCTTCCTTCT+TGG | + | chr4.4:7669217-7669236 | None:intergenic | 40.0% | |
| ACCATCCAACTTGAATTCGA+TGG | - | chr4.4:7672610-7672629 | MS.gene49733:intron | 40.0% | |
| ACTTAGAAGCCAAAAGAAGC+AGG | - | chr4.4:7673372-7673391 | MS.gene49733:intron | 40.0% | |
| ACTTGAAGAAGAAGTCACTC+TGG | - | chr4.4:7673401-7673420 | MS.gene49733:intron | 40.0% | |
| ACTTTCCTATGCTGAAACGA+AGG | + | chr4.4:7672654-7672673 | None:intergenic | 40.0% | |
| AGAATGTGGAAACTTGGCTT+AGG | + | chr4.4:7672335-7672354 | None:intergenic | 40.0% | |
| AGGAGAGTAGATCATATGGA+GGG | + | chr4.4:7672270-7672289 | None:intergenic | 40.0% | |
| AGGATATGGACGAACTTCTA+AGG | - | chr4.4:7671223-7671242 | MS.gene49733:intron | 40.0% | |
| AGGATGTTGTGTTGGATATG+TGG | + | chr4.4:7672429-7672448 | None:intergenic | 40.0% | |
| AGTCAAATCACTAGAGGTAG+AGG | + | chr4.4:7672246-7672265 | None:intergenic | 40.0% | |
| AGTGTATCCCTTGTATTTGC+AGG | + | chr4.4:7674546-7674565 | None:intergenic | 40.0% | |
| ATAACATTGGAGACAGGGTT+GGG | + | chr4.4:7672377-7672396 | None:intergenic | 40.0% | |
| ATCAGCAATCGCCAAAGATT+GGG | - | chr4.4:7674030-7674049 | MS.gene49733:CDS | 40.0% | |
| CAGTGTGCTAAAACCTACTA+AGG | + | chr4.4:7674948-7674967 | None:intergenic | 40.0% | |
| CATATGGAGCTGTAACAAAG+GGG | - | chr4.4:7671058-7671077 | MS.gene49733:CDS | 40.0% | |
| CCACACTTGTGAGACTATTT+GGG | - | chr4.4:7669574-7669593 | MS.gene49733:CDS | 40.0% | |
| CGATAGTCTGTCAATCTTGA+AGG | - | chr4.4:7673345-7673364 | MS.gene49733:intron | 40.0% | |
| CTATGAAGACCGAAGTAATG+CGG | - | chr4.4:7675497-7675516 | MS.gene49733:intron | 40.0% | |
| CTGACAAGTGACAATCAACT+CGG | + | chr4.4:7670277-7670296 | None:intergenic | 40.0% | |
| GAAAAAGAATCAGCATAGCG+TGG | + | chr4.4:7669402-7669421 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGAAGCTGT+TGG | - | chr4.4:7669333-7669352 | MS.gene49733:CDS | 40.0% | |
| GACTTGTACATTCCGTAGTA+AGG | + | chr4.4:7672290-7672309 | None:intergenic | 40.0% | |
| GATTTGACAAGTGCAAAGGA+GGG | - | chr4.4:7669288-7669307 | MS.gene49733:CDS | 40.0% | |
| GCAAACCATCGAATTCAAGT+TGG | + | chr4.4:7672618-7672637 | None:intergenic | 40.0% | |
| GCATATGGAGCTGTAACAAA+GGG | - | chr4.4:7671057-7671076 | MS.gene49733:CDS | 40.0% | |
| GGACTTTGACAGTCTGAAAA+TGG | - | chr4.4:7675795-7675814 | MS.gene49733:CDS | 40.0% | |
| GGGTGTGGATAGTAAGAAAA+AGG | - | chr4.4:7669308-7669327 | MS.gene49733:CDS | 40.0% | |
| GGTTGCAAACACTATTGTCA+AGG | - | chr4.4:7671107-7671126 | MS.gene49733:CDS | 40.0% | |
| GTTCTATGCCTGCAAATACA+AGG | - | chr4.4:7674535-7674554 | MS.gene49733:intron | 40.0% | |
| GTTTAACAGAGTGAACCATG+AGG | - | chr4.4:7670763-7670782 | MS.gene49733:intron | 40.0% | |
| TACTAAGTGGGATAAGGCTT+TGG | + | chr4.4:7672109-7672128 | None:intergenic | 40.0% | |
| TCAAGTATGTGCAAATCTGC+TGG | + | chr4.4:7670563-7670582 | None:intergenic | 40.0% | |
| TGATTTGACAAGTGCAAAGG+AGG | - | chr4.4:7669287-7669306 | MS.gene49733:CDS | 40.0% | |
| TGCAGGTATATACTCACCAA+AGG | - | chr4.4:7673725-7673744 | MS.gene49733:CDS | 40.0% | |
| TGCATATGGAGCTGTAACAA+AGG | - | chr4.4:7671056-7671075 | MS.gene49733:CDS | 40.0% | |
| TGGGGAACGAAATTAATGCA+AGG | - | chr4.4:7669945-7669964 | MS.gene49733:intron | 40.0% | |
| TGTATCACATAGAACACCTG+AGG | - | chr4.4:7672572-7672591 | MS.gene49733:intron | 40.0% | |
| TGTATTTGCAGGCATAGAAC+TGG | + | chr4.4:7674535-7674554 | None:intergenic | 40.0% | |
| TGTTGAGGGACTTGATTGAA+AGG | - | chr4.4:7671956-7671975 | MS.gene49733:intron | 40.0% | |
| TTATCAGCATAAGCGTGATG+AGG | - | chr4.4:7672937-7672956 | MS.gene49733:intron | 40.0% | |
| TTCTGCATGACATTCAATGC+TGG | + | chr4.4:7674802-7674821 | None:intergenic | 40.0% | |
| TTGGCTGTGTTTGTAGCAAT+TGG | + | chr4.4:7675175-7675194 | None:intergenic | 40.0% | |
| TTTCTCCTTCGTTTCAGCAT+AGG | - | chr4.4:7672646-7672665 | MS.gene49733:intron | 40.0% | |
| ! | ACAAACCAAAAGTGTGTGCT+AGG | + | chr4.4:7673118-7673137 | None:intergenic | 40.0% |
| ! | AGAGGTATGTTCTCATCTGT+TGG | - | chr4.4:7674635-7674654 | MS.gene49733:intron | 40.0% |
| ! | AGTGCTTAACCTGCTTCTTT+TGG | + | chr4.4:7673384-7673403 | None:intergenic | 40.0% |
| ! | AGTTGATTGTCACTTGTCAG+TGG | - | chr4.4:7670277-7670296 | MS.gene49733:intron | 40.0% |
| ! | ATTTGCCTAGCACACACTTT+TGG | - | chr4.4:7673110-7673129 | MS.gene49733:intron | 40.0% |
| ! | GAGTTTAGTTCAACATACGG+CGG | - | chr4.4:7671640-7671659 | MS.gene49733:intron | 40.0% |
| ! | GGGGTTAATTTGACCAACTT+TGG | - | chr4.4:7670884-7670903 | MS.gene49733:intron | 40.0% |
| ! | TCTGATGAGGTGATTCGTTT+TGG | - | chr4.4:7671387-7671406 | MS.gene49733:intron | 40.0% |
| ! | TTGACGTTCTAGACACACTT+GGG | - | chr4.4:7670998-7671017 | MS.gene49733:intron | 40.0% |
| !! | ACCATCGAATTCAAGTTGGA+TGG | + | chr4.4:7672614-7672633 | None:intergenic | 40.0% |
| !! | AGAAGAGGTGCTTAAGTTAG+AGG | - | chr4.4:7671179-7671198 | MS.gene49733:intron | 40.0% |
| !! | AGACTATTTGGGAGTGCTTA+TGG | - | chr4.4:7669585-7669604 | MS.gene49733:CDS | 40.0% |
| !! | CATGAGCTCTAAAGTGATTC+AGG | + | chr4.4:7674308-7674327 | None:intergenic | 40.0% |
| !! | CTGAATCACTTTAGAGCTCA+TGG | - | chr4.4:7674306-7674325 | MS.gene49733:intron | 40.0% |
| !! | CTGATTTGGTGCTGATTTGT+TGG | - | chr4.4:7670529-7670548 | MS.gene49733:CDS | 40.0% |
| !! | GTAAGATTGGTGACGTTGTA+TGG | + | chr4.4:7672511-7672530 | None:intergenic | 40.0% |
| !! | TATACTCACCAAAGGCATTC+AGG | - | chr4.4:7673733-7673752 | MS.gene49733:CDS | 40.0% |
| !! | TGCCAACTTGCTCTGATTTT+TGG | - | chr4.4:7671334-7671353 | MS.gene49733:intron | 40.0% |
| !!! | AAGATGTTTTTTACTGGCCG+AGG | - | chr4.4:7673568-7673587 | MS.gene49733:intron | 40.0% |
| !!! | CTGATTTTTGGTACGTTTCC+AGG | - | chr4.4:7671346-7671365 | MS.gene49733:intron | 40.0% |
| !!! | GTTTTTAGCCTTGCAATGCA+TGG | - | chr4.4:7671493-7671512 | MS.gene49733:intron | 40.0% |
| !!! | TCGTTTTGGAAATCGGTCAA+AGG | - | chr4.4:7671401-7671420 | MS.gene49733:intron | 40.0% |
| AACGAAGTGTAGCAGAGATG+AGG | + | chr4.4:7672449-7672468 | None:intergenic | 45.0% | |
| AAGACAAGCTGCTGTTGCTA+AGG | - | chr4.4:7669446-7669465 | MS.gene49733:CDS | 45.0% | |
| AAGTACAGCCTGAATGCCTT+TGG | + | chr4.4:7673744-7673763 | None:intergenic | 45.0% | |
| AATAAAGCCTTTGGCAGTGC+AGG | - | chr4.4:7673708-7673727 | MS.gene49733:CDS | 45.0% | |
| AATAGTCTCACAAGTGTGGC+CGG | + | chr4.4:7669573-7669592 | None:intergenic | 45.0% | |
| AATTGATGCAGAGCGCATCA+CGG | - | chr4.4:7675311-7675330 | MS.gene49733:intron | 45.0% | |
| AATTTACCCTTCCACTCGAG+CGG | - | chr4.4:7672543-7672562 | MS.gene49733:intron | 45.0% | |
| ACACAGCCAAGTAAGATGTC+TGG | - | chr4.4:7675185-7675204 | MS.gene49733:intron | 45.0% | |
| AGAGCTGGCACTATTGGATT+CGG | - | chr4.4:7670967-7670986 | MS.gene49733:intron | 45.0% | |
| ATCCGGTAGTACAGAATGCT+CGG | - | chr4.4:7670161-7670180 | MS.gene49733:intron | 45.0% | |
| ATGTGGAAACTTGGCTTAGG+TGG | + | chr4.4:7672332-7672351 | None:intergenic | 45.0% | |
| CAAACAAAGGAGGCTACCAA+AGG | - | chr4.4:7674889-7674908 | MS.gene49733:intron | 45.0% | |
| CAATCTTTGGCGATTGCTGA+TGG | + | chr4.4:7674031-7674050 | None:intergenic | 45.0% | |
| CAGAGATGAGGATGTTGTGT+TGG | + | chr4.4:7672437-7672456 | None:intergenic | 45.0% | |
| CATCAGCAATCGCCAAAGAT+TGG | - | chr4.4:7674029-7674048 | MS.gene49733:CDS | 45.0% | |
| CATTCTGTACTACCGGATGT+GGG | + | chr4.4:7670159-7670178 | None:intergenic | 45.0% | |
| CCCAAATAGTCTCACAAGTG+TGG | + | chr4.4:7669577-7669596 | None:intergenic | 45.0% | |
| CGTTTATCCCAACAAGGTCT+TGG | - | chr4.4:7669753-7669772 | MS.gene49733:intron | 45.0% | |
| CTCAACGACAAGTAGAAGCA+AGG | - | chr4.4:7675858-7675877 | MS.gene49733:CDS | 45.0% | |
| CTTCAGCATGATCTGCTCAT+CGG | + | chr4.4:7675725-7675744 | None:intergenic | 45.0% | |
| GAAACTTGGCTTAGGTGGTT+TGG | + | chr4.4:7672327-7672346 | None:intergenic | 45.0% | |
| GAGGGTAGTCAAATCACTAG+AGG | + | chr4.4:7672252-7672271 | None:intergenic | 45.0% | |
| GATAACATTGGAGACAGGGT+TGG | + | chr4.4:7672378-7672397 | None:intergenic | 45.0% | |
| GCCACACTTGTGAGACTATT+TGG | - | chr4.4:7669573-7669592 | MS.gene49733:CDS | 45.0% | |
| GCTCACCTCAAGAATCTGAT+AGG | - | chr4.4:7670106-7670125 | MS.gene49733:intron | 45.0% | |
| GTAACAAAGGGGAACGAAGT+TGG | - | chr4.4:7671069-7671088 | MS.gene49733:CDS | 45.0% | |
| GTATATACCTGCACTGCCAA+AGG | + | chr4.4:7673718-7673737 | None:intergenic | 45.0% | |
| TAACATTGGAGACAGGGTTG+GGG | + | chr4.4:7672376-7672395 | None:intergenic | 45.0% | |
| TGAGACAGATAGCAACCACA+TGG | + | chr4.4:7675093-7675112 | None:intergenic | 45.0% | |
| TGCGGTGATTGAAAGTGGAA+AGG | + | chr4.4:7675041-7675060 | None:intergenic | 45.0% | |
| TGGATGGTTGAAATGGAGGA+TGG | + | chr4.4:7672598-7672617 | None:intergenic | 45.0% | |
| TGTCGATGGATATCTGCAGA+TGG | - | chr4.4:7673985-7674004 | MS.gene49733:CDS | 45.0% | |
| TTGCTGCAGACAAGAGGTAA+TGG | - | chr4.4:7671250-7671269 | MS.gene49733:intron | 45.0% | |
| ! | CTTTCTATTTCAGGTCTCCG+AGG | - | chr4.4:7670927-7670946 | MS.gene49733:intron | 45.0% |
| ! | CTTTGGTAGCCTCCTTTGTT+TGG | + | chr4.4:7674891-7674910 | None:intergenic | 45.0% |
| ! | GTTGACGTTCTAGACACACT+TGG | - | chr4.4:7670997-7671016 | MS.gene49733:intron | 45.0% |
| ! | TGCTCATCGGTTGTTAGCAA+TGG | + | chr4.4:7675712-7675731 | None:intergenic | 45.0% |
| ! | TGTCAAGGGCTTTAGTCTCA+TGG | - | chr4.4:7671122-7671141 | MS.gene49733:CDS | 45.0% |
| !! | AGATAGGAGGTAGTGGAACT+TGG | + | chr4.4:7670345-7670364 | None:intergenic | 45.0% |
| !! | AGTGAGTTTTGTCCAACGTG+AGG | - | chr4.4:7670454-7670473 | MS.gene49733:intron | 45.0% |
| !! | ATACAAAAGTACCGCTCGAG+TGG | + | chr4.4:7672557-7672576 | None:intergenic | 45.0% |
| !! | ATTGGTGACGTTGTATGGGA+CGG | + | chr4.4:7672506-7672525 | None:intergenic | 45.0% |
| !! | GATAGGAGGTAGTGGAACTT+GGG | + | chr4.4:7670344-7670363 | None:intergenic | 45.0% |
| !! | TTGGTGTTGCTGCAGAAACT+AGG | - | chr4.4:7669352-7669371 | MS.gene49733:CDS | 45.0% |
| !!! | TTTTGGTTGGGTTGGAGAGT+GGG | - | chr4.4:7675334-7675353 | MS.gene49733:intron | 45.0% |
| !!! | TTTTTTTTTTTTTAATTTTG+TGG | - | chr4.4:7673143-7673162 | MS.gene49733:intron | 5.0% |
| ACTCTGGTCCAGAAGTTTGG+AGG | - | chr4.4:7673417-7673436 | MS.gene49733:intron | 50.0% | |
| ATCCATCGCCAAGACCTTGT+TGG | + | chr4.4:7669764-7669783 | None:intergenic | 50.0% | |
| ATCGGTCAAAGGATCCTCAG+TGG | - | chr4.4:7671412-7671431 | MS.gene49733:intron | 50.0% | |
| CAAAAAGGGCCGCCAAACAA+AGG | - | chr4.4:7674876-7674895 | MS.gene49733:intron | 50.0% | |
| CACCGAGCATTCTGTACTAC+CGG | + | chr4.4:7670166-7670185 | None:intergenic | 50.0% | |
| CGATGAGCAGATCATGCTGA+AGG | - | chr4.4:7675723-7675742 | MS.gene49733:CDS | 50.0% | |
| GACTTCTCCAACATCACCTC+CGG | + | chr4.4:7675617-7675636 | None:intergenic | 50.0% | |
| GAGCTGGCACTATTGGATTC+GGG | - | chr4.4:7670968-7670987 | MS.gene49733:intron | 50.0% | |
| GCATTCTGTACTACCGGATG+TGG | + | chr4.4:7670160-7670179 | None:intergenic | 50.0% | |
| GGATTGTTGCTGCAGACAAG+AGG | - | chr4.4:7671244-7671263 | MS.gene49733:intron | 50.0% | |
| GGTGAGCGAGTGTGTACAAT+TGG | + | chr4.4:7670093-7670112 | None:intergenic | 50.0% | |
| GGTGGAGCAGTTAAATGGCT+TGG | - | chr4.4:7670182-7670201 | MS.gene49733:intron | 50.0% | |
| GTCACTCTGGTCCAGAAGTT+TGG | - | chr4.4:7673414-7673433 | MS.gene49733:intron | 50.0% | |
| TAATGCAAAGAGAGCCCTGC+AGG | + | chr4.4:7674057-7674076 | None:intergenic | 50.0% | |
| TACTACCGGATGTGGGACTT+GGG | + | chr4.4:7670152-7670171 | None:intergenic | 50.0% | |
| TCAGCATAAGCGTGATGAGG+AGG | - | chr4.4:7672940-7672959 | MS.gene49733:intron | 50.0% | |
| TCCATCGCCAAGACCTTGTT+GGG | + | chr4.4:7669763-7669782 | None:intergenic | 50.0% | |
| TGCAGGCATAGAACTGGATC+TGG | + | chr4.4:7674529-7674548 | None:intergenic | 50.0% | |
| TTGAAATGGAGGATGGCCTC+AGG | + | chr4.4:7672591-7672610 | None:intergenic | 50.0% | |
| TTGGCGGTCAAAAGTAAGGC+CGG | - | chr4.4:7675595-7675614 | MS.gene49733:intron | 50.0% | |
| ! | TGCTCGGTGGAGCAGTTAAA+TGG | - | chr4.4:7670177-7670196 | MS.gene49733:intron | 50.0% |
| ! | TGGTAGCCTCCTTTGTTTGG+CGG | + | chr4.4:7674888-7674907 | None:intergenic | 50.0% |
| !! | AAAAGTACCGCTCGAGTGGA+AGG | + | chr4.4:7672553-7672572 | None:intergenic | 50.0% |
| !! | AAAGTACCGCTCGAGTGGAA+GGG | + | chr4.4:7672552-7672571 | None:intergenic | 50.0% |
| !! | CCTTACTTTTGACCGCCAAG+CGG | + | chr4.4:7675594-7675613 | None:intergenic | 50.0% |
| !! | TTGGTGACGTTGTATGGGAC+GGG | + | chr4.4:7672505-7672524 | None:intergenic | 50.0% |
| !!! | AGCGCATCACGGTTTTGGTT+GGG | - | chr4.4:7675322-7675341 | MS.gene49733:intron | 50.0% |
| !!! | CATCACGGTTTTGGTTGGGT+TGG | - | chr4.4:7675326-7675345 | MS.gene49733:intron | 50.0% |
| !!! | GTTTTGGTTGGGTTGGAGAG+TGG | - | chr4.4:7675333-7675352 | MS.gene49733:intron | 50.0% |
| AAAGGGCCGCCAAACAAAGG+AGG | - | chr4.4:7674879-7674898 | MS.gene49733:intron | 55.0% | |
| AGTAAGGCCGGAGGTGATGT+TGG | - | chr4.4:7675607-7675626 | MS.gene49733:intron | 55.0% | |
| CAATAGTGCCAGCTCTGCCT+AGG | + | chr4.4:7670963-7670982 | None:intergenic | 55.0% | |
| CCGCTTGGCGGTCAAAAGTA+AGG | - | chr4.4:7675591-7675610 | MS.gene49733:intron | 55.0% | |
| CGGTAGTACAGAATGCTCGG+TGG | - | chr4.4:7670164-7670183 | MS.gene49733:intron | 55.0% | |
| CTAGGCAGAGCTGGCACTAT+TGG | - | chr4.4:7670961-7670980 | MS.gene49733:intron | 55.0% | |
| CTGCGTTTCTCTCCTCACGT+TGG | + | chr4.4:7670469-7670488 | None:intergenic | 55.0% | |
| CTGGTCCAGAAGTTTGGAGG+AGG | - | chr4.4:7673420-7673439 | MS.gene49733:intron | 55.0% | |
| GACAAGTGCAAAGGAGGGTG+TGG | - | chr4.4:7669293-7669312 | MS.gene49733:CDS | 55.0% | |
| GCCAAAGATTGGGTCCTGCA+GGG | - | chr4.4:7674040-7674059 | MS.gene49733:CDS | 55.0% | |
| GGATCCTCAGTGGCACAACT+TGG | - | chr4.4:7671422-7671441 | MS.gene49733:intron | 55.0% | |
| GGCTACCTCCTCCAAACTTC+TGG | + | chr4.4:7673428-7673447 | None:intergenic | 55.0% | |
| GTACTACCGGATGTGGGACT+TGG | + | chr4.4:7670153-7670172 | None:intergenic | 55.0% | |
| TCCCAACAAGGTCTTGGCGA+TGG | - | chr4.4:7669759-7669778 | MS.gene49733:intron | 55.0% | |
| TCTCTTGTGGCTTCACCGCT+TGG | - | chr4.4:7675576-7675595 | MS.gene49733:intron | 55.0% | |
| TTGGAGAGTGGGCAAGCACT+GGG | - | chr4.4:7675345-7675364 | MS.gene49733:intron | 55.0% | |
| ! | ACTGCAATGGGTGCTGTCGA+TGG | - | chr4.4:7673971-7673990 | MS.gene49733:CDS | 55.0% |
| ! | CGATCCAAGTTGTGCCACTG+AGG | + | chr4.4:7671429-7671448 | None:intergenic | 55.0% |
| ! | TCTGGCGGTGGCTTTGCATA+TGG | - | chr4.4:7671042-7671061 | MS.gene49733:intron | 55.0% |
| ! | TGCAGAGCGCATCACGGTTT+TGG | - | chr4.4:7675317-7675336 | MS.gene49733:intron | 55.0% |
| ! | TGGTGACGTTGTATGGGACG+GGG | + | chr4.4:7672504-7672523 | None:intergenic | 55.0% |
| !! | GAGCGCATCACGGTTTTGGT+TGG | - | chr4.4:7675321-7675340 | MS.gene49733:intron | 55.0% |
| AGTTCACGCCTAGGCAGAGC+TGG | - | chr4.4:7670952-7670971 | MS.gene49733:intron | 60.0% | |
| CGCCAAAGATTGGGTCCTGC+AGG | - | chr4.4:7674039-7674058 | MS.gene49733:CDS | 60.0% | |
| CGTTGTATGGGACGGGGTGT+TGG | + | chr4.4:7672498-7672517 | None:intergenic | 60.0% | |
| CTTGTGGCTTCACCGCTTGG+CGG | - | chr4.4:7675579-7675598 | MS.gene49733:intron | 60.0% | |
| GCCCTGCAGGACCCAATCTT+TGG | + | chr4.4:7674044-7674063 | None:intergenic | 60.0% | |
| GCCTAGGCGTGAACTCACCT+CGG | + | chr4.4:7670947-7670966 | None:intergenic | 60.0% | |
| GCGGTCAAAAGTAAGGCCGG+AGG | - | chr4.4:7675598-7675617 | MS.gene49733:intron | 60.0% | |
| GTTGGAGAGTGGGCAAGCAC+TGG | - | chr4.4:7675344-7675363 | MS.gene49733:intron | 60.0% | |
| TCCGAGGTGAGTTCACGCCT+AGG | - | chr4.4:7670943-7670962 | MS.gene49733:intron | 60.0% | |
| ! | GGGTGGGTTCACCAAGTGCT+TGG | - | chr4.4:7670233-7670252 | MS.gene49733:intron | 60.0% |
| !! | GTATGGGACGGGGTGTTGGA+CGG | + | chr4.4:7672494-7672513 | None:intergenic | 60.0% |
| GGGTGCCCAAGTCCCACATC+CGG | - | chr4.4:7670144-7670163 | MS.gene49733:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 7669168 | 7675984 | 7669168 | ID=MS.gene49733 |
| chr4.4 | mRNA | 7669168 | 7675984 | 7669168 | ID=MS.gene49733.t1;Parent=MS.gene49733 |
| chr4.4 | exon | 7675685 | 7675984 | 7675685 | ID=MS.gene49733.t1.exon1;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7675685 | 7675984 | 7675685 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7673887 | 7674212 | 7673887 | ID=MS.gene49733.t1.exon2;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7673887 | 7674212 | 7673887 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7673692 | 7673784 | 7673692 | ID=MS.gene49733.t1.exon3;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7673692 | 7673784 | 7673692 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7673491 | 7673581 | 7673491 | ID=MS.gene49733.t1.exon4;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7673491 | 7673581 | 7673491 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7672166 | 7672259 | 7672166 | ID=MS.gene49733.t1.exon5;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7672166 | 7672259 | 7672166 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7671711 | 7671808 | 7671711 | ID=MS.gene49733.t1.exon6;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7671711 | 7671808 | 7671711 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7671423 | 7671492 | 7671423 | ID=MS.gene49733.t1.exon7;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7671423 | 7671492 | 7671423 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7671045 | 7671148 | 7671045 | ID=MS.gene49733.t1.exon8;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7671045 | 7671148 | 7671045 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7670514 | 7670630 | 7670514 | ID=MS.gene49733.t1.exon9;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7670514 | 7670630 | 7670514 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7669958 | 7670034 | 7669958 | ID=MS.gene49733.t1.exon10;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7669958 | 7670034 | 7669958 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7669786 | 7669830 | 7669786 | ID=MS.gene49733.t1.exon11;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7669786 | 7669830 | 7669786 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| chr4.4 | exon | 7669168 | 7669675 | 7669168 | ID=MS.gene49733.t1.exon12;Parent=MS.gene49733.t1 |
| chr4.4 | CDS | 7669168 | 7669675 | 7669168 | ID=cds.MS.gene49733.t1;Parent=MS.gene49733.t1 |
| Gene Sequence |
| Protein sequence |
