Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54413.t1 | XP_003621060.1 | 89.1 | 110 | 12 | 0 | 1 | 110 | 69 | 178 | 1.80E-52 | 214.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54413.t1 | Q9SXZ2 | 72.2 | 108 | 30 | 0 | 1 | 108 | 68 | 175 | 1.7e-43 | 176.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54413.t1 | F8T7T3 | 89.1 | 110 | 12 | 0 | 1 | 110 | 69 | 178 | 1.3e-52 | 214.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene54413 | 0.805147 | 1.54E-49 | -1.69E-46 |
| MS.gene049232 | MS.gene54413 | 0.864822 | 9.22E-65 | -1.69E-46 |
| MS.gene049320 | MS.gene54413 | 0.800159 | 1.64E-48 | -1.69E-46 |
| MS.gene049552 | MS.gene54413 | 0.853377 | 2.49E-61 | -1.69E-46 |
| MS.gene049600 | MS.gene54413 | 0.824612 | 7.34E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene54413 | 0.826934 | 2.07E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene54413 | 0.844117 | 9.22E-59 | -1.69E-46 |
| MS.gene05010 | MS.gene54413 | 0.834838 | 2.38E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene54413 | 0.848592 | 5.56E-60 | -1.69E-46 |
| MS.gene050216 | MS.gene54413 | 0.809147 | 2.18E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene54413 | 0.839434 | 1.59E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene54413 | 0.851692 | 7.52E-61 | -1.69E-46 |
| MS.gene050502 | MS.gene54413 | 0.844318 | 8.14E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene54413 | 0.833267 | 5.88E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene54413 | 0.83981 | 1.27E-57 | -1.69E-46 |
| MS.gene050697 | MS.gene54413 | 0.802199 | 6.28E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene54413 | 0.800241 | 1.58E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene54413 | 0.818428 | 1.97E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene54413 | 0.823305 | 1.49E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene54413 | 0.803529 | 3.34E-49 | -1.69E-46 |
| MS.gene05118 | MS.gene54413 | 0.820153 | 7.97E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene54413 | 0.833192 | 6.14E-56 | -1.69E-46 |
| MS.gene051560 | MS.gene54413 | 0.823657 | 1.23E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene54413 | 0.829401 | 5.25E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene54413 | 0.829046 | 6.41E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene54413 | 0.834535 | 2.83E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene54413 | 0.822802 | 1.95E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene54413 | 0.812421 | 4.28E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene54413 | 0.811198 | 7.89E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene54413 | 0.832876 | 7.36E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene54413 | 0.81997 | 8.78E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene54413 | 0.822712 | 2.05E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene54413 | 0.804353 | 2.25E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene54413 | 0.811758 | 5.96E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene54413 | 0.844308 | 8.19E-59 | -1.69E-46 |
| MS.gene053480 | MS.gene54413 | 0.803771 | 2.97E-49 | -1.69E-46 |
| MS.gene053505 | MS.gene54413 | 0.812216 | 4.74E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene54413 | 0.8233 | 1.49E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene54413 | 0.854995 | 8.49E-62 | -1.69E-46 |
| MS.gene053633 | MS.gene54413 | 0.836944 | 6.95E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene54413 | 0.828142 | 1.06E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene54413 | 0.834028 | 3.80E-56 | -1.69E-46 |
| MS.gene055362 | MS.gene54413 | 0.811311 | 7.46E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene54413 | 0.802535 | 5.36E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene54413 | 0.802698 | 4.96E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene54413 | 0.809272 | 2.05E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene54413 | 0.821536 | 3.83E-53 | -1.69E-46 |
| MS.gene056040 | MS.gene54413 | 0.810244 | 1.27E-50 | -1.69E-46 |
| MS.gene056046 | MS.gene54413 | 0.887819 | 1.02E-72 | -1.69E-46 |
| MS.gene056166 | MS.gene54413 | 0.805765 | 1.14E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene54413 | 0.873665 | 1.23E-67 | -1.69E-46 |
| MS.gene056510 | MS.gene54413 | 0.819898 | 9.12E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene54413 | 0.806944 | 6.43E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene54413 | 0.829341 | 5.43E-55 | -1.69E-46 |
| MS.gene057173 | MS.gene54413 | -0.805962 | 1.04E-49 | -1.69E-46 |
| MS.gene05726 | MS.gene54413 | -0.810827 | 9.50E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene54413 | 0.807091 | 5.99E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene54413 | 0.843496 | 1.35E-58 | -1.69E-46 |
| MS.gene058157 | MS.gene54413 | 0.854412 | 1.25E-61 | -1.69E-46 |
| MS.gene058183 | MS.gene54413 | 0.849084 | 4.06E-60 | -1.69E-46 |
| MS.gene059022 | MS.gene54413 | 0.811936 | 5.46E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene54413 | 0.854901 | 9.04E-62 | -1.69E-46 |
| MS.gene059367 | MS.gene54413 | 0.844968 | 5.44E-59 | -1.69E-46 |
| MS.gene059667 | MS.gene54413 | 0.806716 | 7.19E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene54413 | 0.802159 | 6.40E-49 | -1.69E-46 |
| MS.gene059837 | MS.gene54413 | 0.848503 | 5.88E-60 | -1.69E-46 |
| MS.gene059865 | MS.gene54413 | 0.833984 | 3.89E-56 | -1.69E-46 |
| MS.gene05995 | MS.gene54413 | 0.82437 | 8.37E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene54413 | 0.826571 | 2.52E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene54413 | 0.841906 | 3.58E-58 | -1.69E-46 |
| MS.gene060187 | MS.gene54413 | -0.815194 | 1.05E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene54413 | 0.852978 | 3.24E-61 | -1.69E-46 |
| MS.gene060595 | MS.gene54413 | -0.837847 | 4.08E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene54413 | 0.817566 | 3.09E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene54413 | 0.880478 | 5.31E-70 | -1.69E-46 |
| MS.gene06077 | MS.gene54413 | 0.849031 | 4.20E-60 | -1.69E-46 |
| MS.gene060982 | MS.gene54413 | 0.842611 | 2.33E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54413.t1 | MTR_7g006690 | 89.091 | 110 | 12 | 0 | 1 | 110 | 69 | 178 | 5.31e-72 | 212 |
| MS.gene54413.t1 | MTR_7g006630 | 88.182 | 110 | 13 | 0 | 1 | 110 | 64 | 173 | 1.68e-70 | 208 |
| MS.gene54413.t1 | MTR_6g033040 | 70.370 | 108 | 32 | 0 | 1 | 108 | 68 | 175 | 6.30e-55 | 169 |
| MS.gene54413.t1 | MTR_7g084970 | 67.925 | 106 | 34 | 0 | 1 | 106 | 68 | 173 | 2.19e-52 | 162 |
| MS.gene54413.t1 | MTR_7g085020 | 66.038 | 106 | 36 | 0 | 1 | 106 | 69 | 174 | 1.44e-49 | 155 |
| MS.gene54413.t1 | MTR_0020s0120 | 60.377 | 106 | 42 | 0 | 1 | 106 | 67 | 172 | 1.86e-45 | 145 |
| MS.gene54413.t1 | MTR_7g085040 | 59.813 | 107 | 42 | 1 | 1 | 107 | 65 | 170 | 2.77e-43 | 139 |
| MS.gene54413.t1 | MTR_7g104460 | 57.944 | 107 | 44 | 1 | 1 | 106 | 68 | 174 | 1.30e-40 | 132 |
| MS.gene54413.t1 | MTR_0020s0120 | 57.547 | 106 | 38 | 1 | 1 | 106 | 67 | 165 | 3.23e-40 | 131 |
| MS.gene54413.t1 | MTR_1g060190 | 57.143 | 98 | 40 | 1 | 1 | 96 | 68 | 165 | 7.92e-38 | 125 |
| MS.gene54413.t1 | MTR_2g086270 | 51.402 | 107 | 51 | 1 | 1 | 106 | 67 | 173 | 1.45e-36 | 122 |
| MS.gene54413.t1 | MTR_8g106840 | 51.485 | 101 | 48 | 1 | 1 | 100 | 67 | 167 | 9.97e-30 | 105 |
| MS.gene54413.t1 | MTR_5g078320 | 44.118 | 68 | 37 | 1 | 34 | 100 | 16 | 83 | 3.78e-11 | 55.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54413.t1 | AT1G65480 | 72.222 | 108 | 30 | 0 | 1 | 108 | 68 | 175 | 1.86e-56 | 172 |
| MS.gene54413.t1 | AT1G65480 | 72.222 | 108 | 30 | 0 | 1 | 108 | 112 | 219 | 3.46e-56 | 173 |
| MS.gene54413.t1 | AT4G20370 | 67.290 | 107 | 35 | 0 | 1 | 107 | 68 | 174 | 1.72e-51 | 160 |
| MS.gene54413.t1 | AT5G03840 | 57.009 | 107 | 45 | 1 | 1 | 106 | 71 | 177 | 1.49e-39 | 130 |
| MS.gene54413.t1 | AT2G27550 | 53.846 | 104 | 47 | 1 | 1 | 103 | 69 | 172 | 1.94e-38 | 127 |
| MS.gene54413.t1 | AT5G62040 | 55.340 | 103 | 45 | 1 | 1 | 102 | 68 | 170 | 1.24e-37 | 125 |
| MS.gene54413.t1 | AT1G18100 | 53.333 | 105 | 47 | 1 | 1 | 103 | 66 | 170 | 4.31e-34 | 116 |
Find 0 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCCAAAAATATTATAAAT+TGG | + | 50630:24243-24262 | None:intergenic | 10.0% |
| !! | TTATTTATTAAAGATCTATT+TGG | + | 50630:24077-24096 | None:intergenic | 10.0% |
| !! | TTGTATAAATATTCAAAAAA+TGG | + | 50630:24283-24302 | None:intergenic | 10.0% |
| !!! | AATTTTTTAATAATTTAGCA+TGG | - | 50630:24439-24458 | MS.gene54413:intron | 10.0% |
| !!! | ATACATTTTTATATATAACA+AGG | - | 50630:25318-25337 | MS.gene54413:intron | 10.0% |
| !!! | ATCATATTTTTATTTTGTTT+CGG | - | 50630:23729-23748 | MS.gene54413:CDS | 10.0% |
| !!! | TAATATTTTTGGAATTTATA+AGG | - | 50630:24248-24267 | MS.gene54413:intron | 10.0% |
| !!! | TACATTTTTATATATAACAA+GGG | - | 50630:25319-25338 | MS.gene54413:intron | 10.0% |
| !! | ACAAAATAAAAATATGATTG+TGG | + | 50630:23727-23746 | None:intergenic | 15.0% |
| !! | TGATAAATATTATTATGTCT+TGG | - | 50630:23761-23780 | MS.gene54413:CDS | 15.0% |
| !!! | AAAAAAAAAGTGTTGTATTT+AGG | - | 50630:24903-24922 | MS.gene54413:intron | 15.0% |
| !!! | CAACCAATTTATAATATTTT+TGG | - | 50630:24237-24256 | MS.gene54413:intron | 15.0% |
| !!! | TATATTTTTCATGAATTCAA+AGG | + | 50630:24593-24612 | None:intergenic | 15.0% |
| !! | AGTGTAAGAACAAATAATTT+GGG | + | 50630:24330-24349 | None:intergenic | 20.0% |
| !! | ATATTCAAAAAATGGTAAGT+TGG | + | 50630:24275-24294 | None:intergenic | 20.0% |
| !! | ATCAAAATAAAGATAAACAG+TGG | + | 50630:24744-24763 | None:intergenic | 20.0% |
| !! | GAAAAATATAACTTCAATTG+TGG | - | 50630:24603-24622 | MS.gene54413:intron | 20.0% |
| !! | TAGTGTAAGAACAAATAATT+TGG | + | 50630:24331-24350 | None:intergenic | 20.0% |
| !! | TATTTAGGTCAGAAAATAAT+TGG | - | 50630:24918-24937 | MS.gene54413:intron | 20.0% |
| !! | TCAAAATAAAGATAAACAGT+GGG | + | 50630:24743-24762 | None:intergenic | 20.0% |
| !!! | GTTTATCTTTATTTTGATGA+TGG | - | 50630:24746-24765 | MS.gene54413:intron | 20.0% |
| ! | AAATTCAAACTTACCAATAC+AGG | + | 50630:23667-23686 | None:intergenic | 25.0% |
| ! | AATACACAACTTATGATTTG+CGG | - | 50630:24404-24423 | MS.gene54413:intron | 25.0% |
| ! | ATAGTTCATTCTTTGCAATT+TGG | - | 50630:24693-24712 | MS.gene54413:intron | 25.0% |
| ! | ATGCATTTGAACAATGTTTA+TGG | - | 50630:24796-24815 | MS.gene54413:intron | 25.0% |
| !! | TTTTTATATATAACAAGGGC+CGG | - | 50630:25323-25342 | MS.gene54413:intron | 25.0% |
| !! | TTTTTGATAAGTCAATTCAC+TGG | + | 50630:24383-24402 | None:intergenic | 25.0% |
| !!! | ATATTTTAAGAGTGCGTTTT+AGG | - | 50630:23858-23877 | MS.gene54413:intron | 25.0% |
| !!! | CACGTTGTTTTATTAATTGT+AGG | - | 50630:25512-25531 | MS.gene54413:intron | 25.0% |
| !!! | TATTTTAAGAGTGCGTTTTA+GGG | - | 50630:23859-23878 | MS.gene54413:intron | 25.0% |
| ACCATTTCCCTCTTTATTAT+TGG | - | 50630:25146-25165 | MS.gene54413:intron | 30.0% | |
| ATAGCGATCCAATAATAAAG+AGG | + | 50630:25157-25176 | None:intergenic | 30.0% | |
| CAAAATAAGCCAAACAAAAG+AGG | + | 50630:23885-23904 | None:intergenic | 30.0% | |
| CTATAGGACTTAAATTTGGT+TGG | + | 50630:24356-24375 | None:intergenic | 30.0% | |
| TAGCGATCCAATAATAAAGA+GGG | + | 50630:25156-25175 | None:intergenic | 30.0% | |
| TCCAATAATAAAGAGGGAAA+TGG | + | 50630:25150-25169 | None:intergenic | 30.0% | |
| TTATTATTGGATCGCTATAC+AGG | - | 50630:25159-25178 | MS.gene54413:intron | 30.0% | |
| TTTGCAGAAGTTTACAATCT+TGG | - | 50630:25668-25687 | MS.gene54413:intron | 30.0% | |
| ! | ATAAAATTTTGTCTCGATCG+AGG | + | 50630:25638-25657 | None:intergenic | 30.0% |
| ! | ATACACAACTTATGATTTGC+GGG | - | 50630:24405-24424 | MS.gene54413:intron | 30.0% |
| ! | TGGCTAGAATTCACATTTTA+AGG | + | 50630:25378-25397 | None:intergenic | 30.0% |
| !!! | TTTTTTGTCAAGTAGTCTAG+TGG | + | 50630:25398-25417 | None:intergenic | 30.0% |
| AAAATCCAAGACCAACAAGA+GGG | - | 50630:25555-25574 | MS.gene54413:intron | 35.0% | |
| ATATGAGGGAATACCTGTAT+TGG | - | 50630:23651-23670 | MS.gene54413:CDS | 35.0% | |
| CTTTATTCTATTCGCTCACA+AGG | + | 50630:24843-24862 | None:intergenic | 35.0% | |
| GAGGGAAATGGTAATTAGAA+TGG | + | 50630:25138-25157 | None:intergenic | 35.0% | |
| GGATAAACAATAGAACCAAG+TGG | - | 50630:24624-24643 | MS.gene54413:intron | 35.0% | |
| GTGATGTGATAGACAAAACA+AGG | - | 50630:25004-25023 | MS.gene54413:intron | 35.0% | |
| TACAGGTATTCCCTCATATT+AGG | + | 50630:23650-23669 | None:intergenic | 35.0% | |
| TTCAATTGTCAACGAGAAAG+TGG | - | 50630:25713-25732 | MS.gene54413:CDS | 35.0% | |
| TTGATAAGTCAATTCACTGG+CGG | + | 50630:24380-24399 | None:intergenic | 35.0% | |
| ! | TCACTCATGTTTGTTGAACT+TGG | + | 50630:24545-24564 | None:intergenic | 35.0% |
| ! | TGTTGTTTAAGCAACCTTGT+AGG | - | 50630:25597-25616 | MS.gene54413:intron | 35.0% |
| !! | CTTGGTATTGTTTTGTTCAG+TGG | - | 50630:23779-23798 | MS.gene54413:CDS | 35.0% |
| !!! | CACATTTTAAGGTGAGTAAG+TGG | + | 50630:25367-25386 | None:intergenic | 35.0% |
| ATATTAGGATCAGTAGGGCT+TGG | + | 50630:23635-23654 | None:intergenic | 40.0% | |
| CCCTACTGATCCTAATATGA+GGG | - | 50630:23637-23656 | MS.gene54413:CDS | 40.0% | |
| CCCTCATATTAGGATCAGTA+GGG | + | 50630:23640-23659 | None:intergenic | 40.0% | |
| CGGGCTATAGGACTTAAATT+TGG | + | 50630:24360-24379 | None:intergenic | 40.0% | |
| GAAAATCCAAGACCAACAAG+AGG | - | 50630:25554-25573 | MS.gene54413:intron | 40.0% | |
| GCTAATATAGTGTGCCTACA+AGG | + | 50630:25614-25633 | None:intergenic | 40.0% | |
| GTCTCTGAGTATAGATCAGT+TGG | - | 50630:25287-25306 | MS.gene54413:intron | 40.0% | |
| TATTGGATCGCTATACAGGA+TGG | - | 50630:25163-25182 | MS.gene54413:intron | 40.0% | |
| TCCCTCATATTAGGATCAGT+AGG | + | 50630:23641-23660 | None:intergenic | 40.0% | |
| TGATAAGTCAATTCACTGGC+GGG | + | 50630:24379-24398 | None:intergenic | 40.0% | |
| TTGAAATAGAGAGCAGCAAC+AGG | + | 50630:25698-25717 | None:intergenic | 40.0% | |
| !!! | GTTTTAGGGCCTCTTTTGTT+TGG | - | 50630:23873-23892 | MS.gene54413:intron | 40.0% |
| AAGGTGAGTAAGTGGAGTGT+CGG | + | 50630:25359-25378 | None:intergenic | 45.0% | |
| ACACGATGAATCCCTCTTGT+TGG | + | 50630:25569-25588 | None:intergenic | 45.0% | |
| ACCAATATTCCAGCGACTAC+AGG | - | 50630:25188-25207 | MS.gene54413:intron | 45.0% | |
| ACTTGGTCACATCTTGTGCA+TGG | + | 50630:24528-24547 | None:intergenic | 45.0% | |
| CACAGACACAAGAAACCACT+TGG | + | 50630:24642-24661 | None:intergenic | 45.0% | |
| CCAATATTCCAGCGACTACA+GGG | - | 50630:25189-25208 | MS.gene54413:intron | 45.0% | |
| GCCCTACTGATCCTAATATG+AGG | - | 50630:23636-23655 | MS.gene54413:CDS | 45.0% | |
| TGTCAACGAGAAAGTGGTTC+CGG | - | 50630:25719-25738 | MS.gene54413:CDS | 45.0% | |
| ! | ATTCGCTCACAAGGTGTCTA+CGG | + | 50630:24834-24853 | None:intergenic | 45.0% |
| ! | TGAATCCCTCTTGTTGGTCT+TGG | + | 50630:25563-25582 | None:intergenic | 45.0% |
| !! | TTTCTATATAATTAAAAAAA+TGG | - | 50630:24154-24173 | MS.gene54413:CDS | 5.0% |
| AATGTTGTCCCTGTAGTCGC+TGG | + | 50630:25200-25219 | None:intergenic | 50.0% | |
| CCCTGTAGTCGCTGGAATAT+TGG | + | 50630:25192-25211 | None:intergenic | 50.0% | |
| GCGACTACAGGGACAACATT+CGG | - | 50630:25200-25219 | MS.gene54413:intron | 50.0% | |
| ! | AGGTGAGTAAGTGGAGTGTC+GGG | + | 50630:25358-25377 | None:intergenic | 50.0% |
| ! | TTCGCTCACAAGGTGTCTAC+GGG | + | 50630:24833-24852 | None:intergenic | 50.0% |
| !! | TCAATTCACTGGCGGGCTAT+AGG | + | 50630:24372-24391 | None:intergenic | 50.0% |
| AAAGTGGTTCCGGTGGAAGG+AGG | - | 50630:25729-25748 | MS.gene54413:CDS | 55.0% | |
| CAACGAGAAAGTGGTTCCGG+TGG | - | 50630:25722-25741 | MS.gene54413:CDS | 55.0% | |
| GAGAAAGTGGTTCCGGTGGA+AGG | - | 50630:25726-25745 | MS.gene54413:CDS | 55.0% | |
| ! | CAAGGTGTCTACGGGATGGA+TGG | + | 50630:24825-24844 | None:intergenic | 55.0% |
| ! | CTCACAAGGTGTCTACGGGA+TGG | + | 50630:24829-24848 | None:intergenic | 55.0% |
| !! | CAGTAGGGCTTGGTGCATCA+GGG | + | 50630:23625-23644 | None:intergenic | 55.0% |
| !! | GATGGTTAGCCTCCTTCCAC+CGG | + | 50630:25741-25760 | None:intergenic | 55.0% |
| !! | GGTGAGTAAGTGGAGTGTCG+GGG | + | 50630:25357-25376 | None:intergenic | 55.0% |
| !! | TCAGTAGGGCTTGGTGCATC+AGG | + | 50630:23626-23645 | None:intergenic | 55.0% |
| !! | GAGTGTCGGGGTTCGAACAC+CGG | + | 50630:25345-25364 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50630 | gene | 23611 | 25763 | 23611 | ID=MS.gene54413 |
| 50630 | mRNA | 23611 | 25763 | 23611 | ID=MS.gene54413.t1;Parent=MS.gene54413 |
| 50630 | exon | 25702 | 25763 | 25702 | ID=MS.gene54413.t1.exon1;Parent=MS.gene54413.t1 |
| 50630 | CDS | 25702 | 25763 | 25702 | ID=cds.MS.gene54413.t1;Parent=MS.gene54413.t1 |
| 50630 | exon | 24153 | 24193 | 24153 | ID=MS.gene54413.t1.exon2;Parent=MS.gene54413.t1 |
| 50630 | CDS | 24153 | 24193 | 24153 | ID=cds.MS.gene54413.t1;Parent=MS.gene54413.t1 |
| 50630 | exon | 23611 | 23840 | 23611 | ID=MS.gene54413.t1.exon3;Parent=MS.gene54413.t1 |
| 50630 | CDS | 23611 | 23840 | 23611 | ID=cds.MS.gene54413.t1;Parent=MS.gene54413.t1 |
| Gene Sequence |
| Protein sequence |
