Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57647.t1 | AES92246.2 | 61.1 | 898 | 43 | 7 | 1 | 648 | 1 | 842 | 1.30E-283 | 985.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57647.t1 | Q8L7W8 | 43.0 | 784 | 163 | 6 | 26 | 547 | 44 | 805 | 2.4e-172 | 607.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57647.t1 | G7JUA1 | 61.1 | 898 | 43 | 7 | 1 | 648 | 1 | 842 | 9.5e-284 | 985.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene57647 | 0.824213 | 9.12E-54 | -1.69E-46 |
| MS.gene049173 | MS.gene57647 | 0.818881 | 1.55E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene57647 | 0.812523 | 4.06E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene57647 | 0.840355 | 9.14E-58 | -1.69E-46 |
| MS.gene049232 | MS.gene57647 | 0.834225 | 3.39E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene57647 | 0.872522 | 2.98E-67 | -1.69E-46 |
| MS.gene049320 | MS.gene57647 | 0.869694 | 2.55E-66 | -1.69E-46 |
| MS.gene05010 | MS.gene57647 | 0.859641 | 3.59E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene57647 | 0.846118 | 2.65E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene57647 | 0.852021 | 6.06E-61 | -1.69E-46 |
| MS.gene050216 | MS.gene57647 | 0.817052 | 4.03E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene57647 | 0.805878 | 1.08E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene57647 | 0.848651 | 5.35E-60 | -1.69E-46 |
| MS.gene050504 | MS.gene57647 | 0.869539 | 2.87E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene57647 | 0.873122 | 1.88E-67 | -1.69E-46 |
| MS.gene050612 | MS.gene57647 | 0.860744 | 1.67E-63 | -1.69E-46 |
| MS.gene050675 | MS.gene57647 | 0.809966 | 1.46E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene57647 | 0.81724 | 3.65E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene57647 | 0.836521 | 8.91E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene57647 | 0.811239 | 7.73E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene57647 | 0.808498 | 3.01E-50 | -1.69E-46 |
| MS.gene050876 | MS.gene57647 | 0.809973 | 1.45E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene57647 | 0.830024 | 3.71E-55 | -1.69E-46 |
| MS.gene05100 | MS.gene57647 | 0.831465 | 1.64E-55 | -1.69E-46 |
| MS.gene051551 | MS.gene57647 | 0.820396 | 7.01E-53 | -1.69E-46 |
| MS.gene051564 | MS.gene57647 | 0.802629 | 5.12E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene57647 | 0.849524 | 3.06E-60 | -1.69E-46 |
| MS.gene051858 | MS.gene57647 | 0.804711 | 1.89E-49 | -1.69E-46 |
| MS.gene051949 | MS.gene57647 | 0.820406 | 6.97E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene57647 | 0.802493 | 5.46E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene57647 | 0.817247 | 3.64E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene57647 | 0.813433 | 2.57E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene57647 | 0.815109 | 1.09E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene57647 | 0.806034 | 1.00E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene57647 | 0.844548 | 7.06E-59 | -1.69E-46 |
| MS.gene053286 | MS.gene57647 | 0.850453 | 1.68E-60 | -1.69E-46 |
| MS.gene053420 | MS.gene57647 | -0.800179 | 1.63E-48 | -1.69E-46 |
| MS.gene053561 | MS.gene57647 | -0.822114 | 2.82E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene57647 | 0.822435 | 2.37E-53 | -1.69E-46 |
| MS.gene054373 | MS.gene57647 | 0.801175 | 1.02E-48 | -1.69E-46 |
| MS.gene054374 | MS.gene57647 | 0.86239 | 5.24E-64 | -1.69E-46 |
| MS.gene054600 | MS.gene57647 | 0.819286 | 1.26E-52 | -1.69E-46 |
| MS.gene054616 | MS.gene57647 | -0.813855 | 2.07E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene57647 | 0.875098 | 4.03E-68 | -1.69E-46 |
| MS.gene054954 | MS.gene57647 | 0.868606 | 5.76E-66 | -1.69E-46 |
| MS.gene055154 | MS.gene57647 | -0.804086 | 2.56E-49 | -1.69E-46 |
| MS.gene055212 | MS.gene57647 | 0.817461 | 3.26E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene57647 | 0.854277 | 1.37E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene57647 | 0.853358 | 2.52E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene57647 | 0.839977 | 1.15E-57 | -1.69E-46 |
| MS.gene055634 | MS.gene57647 | 0.835177 | 1.95E-56 | -1.69E-46 |
| MS.gene055636 | MS.gene57647 | 0.812054 | 5.14E-51 | -1.69E-46 |
| MS.gene055638 | MS.gene57647 | 0.839282 | 1.74E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene57647 | 0.806089 | 9.74E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene57647 | 0.810181 | 1.31E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene57647 | 0.821493 | 3.92E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene57647 | 0.827322 | 1.67E-54 | -1.69E-46 |
| MS.gene055776 | MS.gene57647 | 0.826382 | 2.80E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene57647 | 0.818369 | 2.03E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene57647 | 0.844754 | 6.21E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene57647 | 0.833114 | 6.42E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene57647 | 0.871904 | 4.79E-67 | -1.69E-46 |
| MS.gene056692 | MS.gene57647 | 0.826549 | 2.55E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene57647 | 0.815051 | 1.13E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene57647 | 0.821766 | 3.39E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene57647 | 0.860442 | 2.06E-63 | -1.69E-46 |
| MS.gene058544 | MS.gene57647 | 0.805132 | 1.55E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene57647 | 0.805882 | 1.08E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene57647 | 0.855715 | 5.24E-62 | -1.69E-46 |
| MS.gene059022 | MS.gene57647 | 0.865676 | 4.97E-65 | -1.69E-46 |
| MS.gene059023 | MS.gene57647 | 0.816458 | 5.47E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene57647 | 0.831736 | 1.41E-55 | -1.69E-46 |
| MS.gene05913 | MS.gene57647 | 0.842707 | 2.19E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene57647 | 0.855879 | 4.69E-62 | -1.69E-46 |
| MS.gene059718 | MS.gene57647 | 0.832365 | 9.85E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene57647 | 0.846541 | 2.04E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene57647 | 0.808896 | 2.47E-50 | -1.69E-46 |
| MS.gene060337 | MS.gene57647 | -0.814634 | 1.39E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene57647 | 0.883111 | 5.91E-71 | -1.69E-46 |
| MS.gene060762 | MS.gene57647 | 0.818631 | 1.77E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene57647 | 0.846345 | 2.30E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene57647 | 0.804539 | 2.06E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene57647 | 0.821641 | 3.62E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene57647 | 0.811712 | 6.10E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57647.t1 | MTR_4g127370 | 94.118 | 221 | 13 | 0 | 121 | 341 | 232 | 452 | 3.39e-140 | 430 |
| MS.gene57647.t1 | MTR_4g127370 | 70.093 | 321 | 29 | 5 | 339 | 648 | 578 | 842 | 1.32e-135 | 418 |
| MS.gene57647.t1 | MTR_4g127370 | 87.770 | 139 | 16 | 1 | 1 | 138 | 1 | 139 | 1.28e-71 | 248 |
| MS.gene57647.t1 | MTR_1g107135 | 90.521 | 211 | 19 | 1 | 339 | 549 | 651 | 860 | 6.40e-132 | 410 |
| MS.gene57647.t1 | MTR_1g107135 | 79.339 | 242 | 49 | 1 | 121 | 362 | 306 | 546 | 3.97e-124 | 389 |
| MS.gene57647.t1 | MTR_1g107135 | 71.831 | 142 | 34 | 1 | 1 | 142 | 60 | 195 | 4.00e-59 | 214 |
| MS.gene57647.t1 | MTR_4g127360 | 74.038 | 104 | 16 | 1 | 556 | 648 | 1 | 104 | 1.96e-44 | 154 |
| MS.gene57647.t1 | MTR_4g014040 | 54.808 | 104 | 36 | 1 | 556 | 648 | 1 | 104 | 1.33e-29 | 114 |
| MS.gene57647.t1 | MTR_4g014040 | 54.808 | 104 | 36 | 1 | 556 | 648 | 1 | 104 | 1.85e-29 | 113 |
| MS.gene57647.t1 | MTR_4g014040 | 54.808 | 104 | 36 | 1 | 556 | 648 | 1 | 104 | 2.04e-29 | 114 |
| MS.gene57647.t1 | MTR_7g059460 | 48.077 | 104 | 43 | 1 | 556 | 648 | 1 | 104 | 5.71e-23 | 94.7 |
| MS.gene57647.t1 | MTR_7g059460 | 48.077 | 104 | 43 | 1 | 556 | 648 | 1 | 104 | 6.77e-23 | 94.7 |
| MS.gene57647.t1 | MTR_1g107145 | 74.545 | 55 | 13 | 1 | 21 | 75 | 56 | 109 | 2.73e-19 | 84.7 |
| MS.gene57647.t1 | MTR_4g013730 | 41.748 | 103 | 49 | 2 | 556 | 647 | 1 | 103 | 3.98e-19 | 83.6 |
| MS.gene57647.t1 | MTR_0562s0020 | 41.748 | 103 | 49 | 2 | 556 | 647 | 1 | 103 | 3.98e-19 | 83.6 |
| MS.gene57647.t1 | MTR_7g070250 | 40.777 | 103 | 50 | 1 | 556 | 647 | 1 | 103 | 1.14e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57647.t1 | AT4G34260 | 71.292 | 209 | 59 | 1 | 339 | 547 | 598 | 805 | 1.55e-101 | 328 |
| MS.gene57647.t1 | AT4G34260 | 57.674 | 215 | 70 | 2 | 127 | 341 | 279 | 472 | 2.69e-72 | 250 |
| MS.gene57647.t1 | AT4G34260 | 57.522 | 113 | 48 | 0 | 26 | 138 | 44 | 156 | 7.69e-35 | 141 |
| MS.gene57647.t1 | AT5G57170 | 77.670 | 103 | 12 | 1 | 556 | 647 | 1 | 103 | 2.88e-45 | 157 |
| MS.gene57647.t1 | AT5G57170 | 77.670 | 103 | 12 | 1 | 556 | 647 | 1 | 103 | 4.89e-45 | 156 |
| MS.gene57647.t1 | AT5G01650 | 52.885 | 104 | 38 | 1 | 556 | 648 | 1 | 104 | 5.63e-29 | 112 |
| MS.gene57647.t1 | AT5G01650 | 52.885 | 104 | 38 | 1 | 556 | 648 | 1 | 104 | 1.09e-28 | 110 |
| MS.gene57647.t1 | AT5G01650 | 52.885 | 104 | 38 | 1 | 556 | 648 | 1 | 104 | 1.26e-28 | 111 |
| MS.gene57647.t1 | AT5G01650 | 52.885 | 104 | 38 | 1 | 556 | 648 | 1 | 104 | 1.26e-28 | 111 |
| MS.gene57647.t1 | AT3G51660 | 36.275 | 102 | 54 | 1 | 556 | 646 | 1 | 102 | 1.57e-13 | 67.8 |
Find 157 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATCTTCAAATGAATTAT+TGG | 0.184612 | 8.1:+5664520 | MS.gene57647:CDS |
| CTGCGCTGCCTCGGGATAAA+TGG | 0.224145 | 8.1:+5666040 | MS.gene57647:CDS |
| CATTTGTTTGGCTTGTTTCC+GGG | 0.239436 | 8.1:+5665298 | MS.gene57647:CDS |
| AAAAGGAGTTATACATGTTT+TGG | 0.239754 | 8.1:+5663783 | MS.gene57647:CDS |
| CGGACTTCAGCCAGCGCTTC+AGG | 0.247003 | 8.1:-5662925 | None:intergenic |
| ACATTTGTTTGGCTTGTTTC+CGG | 0.260856 | 8.1:+5665297 | MS.gene57647:CDS |
| TGCTAGGGATGGATCAATTA+TGG | 0.289988 | 8.1:+5665068 | MS.gene57647:CDS |
| ACAGCTTCCTCGTCGTTTGA+TGG | 0.292756 | 8.1:+5663856 | MS.gene57647:CDS |
| ACCCAAAGTTCGCGTCAATT+TGG | 0.294452 | 8.1:-5665852 | None:intergenic |
| ACAAAGATGTTGTGCCTAAA+TGG | 0.300498 | 8.1:+5664271 | MS.gene57647:CDS |
| TCGTCTTGGTGCCATGATTT+GGG | 0.304806 | 8.1:+5662556 | MS.gene57647:CDS |
| TCATTGCTTCCGACATTCTC+AGG | 0.318713 | 8.1:+5667363 | MS.gene57647:CDS |
| CGGCATGTTTCACATTTGTT+TGG | 0.319279 | 8.1:+5665286 | MS.gene57647:CDS |
| AGGTTTGCCACCTGAGTTCC+AGG | 0.326926 | 8.1:-5664234 | None:intergenic |
| CTGATATCAATTGGCGGACT+TGG | 0.336187 | 8.1:+5667683 | MS.gene57647:CDS |
| ATGAAGCTCAGTAATGAAAA+AGG | 0.338778 | 8.1:+5663766 | MS.gene57647:intron |
| GTCGTCTTGGTGCCATGATT+TGG | 0.342453 | 8.1:+5662555 | MS.gene57647:CDS |
| TCATCTGCATTTGCTAAACT+TGG | 0.351811 | 8.1:-5662452 | None:intergenic |
| TCCAAATTGACGCGAACTTT+GGG | 0.352849 | 8.1:+5665851 | MS.gene57647:CDS |
| TGGCAAACCTACAGGGTATA+TGG | 0.362855 | 8.1:+5664247 | MS.gene57647:CDS |
| ATAAAATTTGATGTAGAATC+TGG | 0.367314 | 8.1:-5667777 | None:intergenic |
| TTCCAAATTGACGCGAACTT+TGG | 0.374868 | 8.1:+5665850 | MS.gene57647:CDS |
| AACTTGGAAAGCTGCATTGT+GGG | 0.388241 | 8.1:+5665699 | MS.gene57647:CDS |
| CAATGTATAGTTTAGTTTGA+AGG | 0.396267 | 8.1:-5667748 | None:intergenic |
| AAACCAACAGCTTCCTGCTC+AGG | 0.402559 | 8.1:-5665784 | None:intergenic |
| ACTTACTTCCTGCGCTGCCT+CGG | 0.402607 | 8.1:+5666031 | MS.gene57647:CDS |
| CTCAAATTGTCGGGACCTCC+TGG | 0.407621 | 8.1:+5662994 | MS.gene57647:CDS |
| TGAACCTTCAATGCCCTTGA+AGG | 0.412727 | 8.1:+5662478 | MS.gene57647:CDS |
| TGCGCTGCCTCGGGATAAAT+GGG | 0.419323 | 8.1:+5666041 | MS.gene57647:CDS |
| ATCTGCATGAAGTTGGCCTT+TGG | 0.420261 | 8.1:+5666133 | MS.gene57647:CDS |
| GGTGGAGTGCCTATTGCATT+TGG | 0.425683 | 8.1:+5667629 | MS.gene57647:CDS |
| TCTTCACAGAGGACACACTA+TGG | 0.426753 | 8.1:+5662866 | MS.gene57647:intron |
| ACATGCCGATGATGTACATC+TGG | 0.430968 | 8.1:-5665271 | None:intergenic |
| GGAAGATGGAGAATGGATTA+TGG | 0.432678 | 8.1:+5662397 | MS.gene57647:CDS |
| GGGAAAACATACTCCCATTT+AGG | 0.432850 | 8.1:-5664285 | None:intergenic |
| GAGAGCTGCAGTTGTAGCTT+CGG | 0.436172 | 8.1:-5662974 | None:intergenic |
| GTAACCTTCAAGGGCATTGA+AGG | 0.437048 | 8.1:-5662482 | None:intergenic |
| ATTTCCTCTTTGTCAGTCAA+TGG | 0.448002 | 8.1:+5664594 | MS.gene57647:CDS |
| TTTCTAGGCCTGCCAAGTAC+TGG | 0.448087 | 8.1:+5662507 | MS.gene57647:CDS |
| CAAAGATGTTGTGCCTAAAT+GGG | 0.448272 | 8.1:+5664272 | MS.gene57647:CDS |
| GAAGCAATGACAGGATCAAC+GGG | 0.452665 | 8.1:-5667350 | None:intergenic |
| TAGAGTTGAAGGTTCAGATT+GGG | 0.452982 | 8.1:+5663819 | MS.gene57647:CDS |
| TCCACAGCTTTACAAAGATC+TGG | 0.454802 | 8.1:-5665346 | None:intergenic |
| AACTCAGGTGGCAAACCTAC+AGG | 0.457009 | 8.1:+5664239 | MS.gene57647:CDS |
| ACTGAAGAGCCGGCTGCCTA+TGG | 0.457767 | 8.1:+5667656 | MS.gene57647:CDS |
| GTCCCGGGTGGTCAACAACT+TGG | 0.458789 | 8.1:+5665683 | MS.gene57647:CDS |
| TCAGTCCCACCAAATGCAAT+AGG | 0.463249 | 8.1:-5667638 | None:intergenic |
| TTGTTCACGTCCTGGAACTC+AGG | 0.465346 | 8.1:+5664224 | MS.gene57647:CDS |
| ACTCATGTAGGTTGCAAGAA+AGG | 0.468098 | 8.1:-5664548 | None:intergenic |
| CTACAATGGAAGATGGAGAA+TGG | 0.469723 | 8.1:+5662390 | None:intergenic |
| GGCATTGCGTTGCACTCACA+CGG | 0.470144 | 8.1:-5667302 | None:intergenic |
| CATTTATCCCGAGGCAGCGC+AGG | 0.470354 | 8.1:-5666039 | None:intergenic |
| TTTCTTAAGGACTCGGAAGT+AGG | 0.471772 | 8.1:-5663913 | None:intergenic |
| GGGTGACAGTCAACATCTGC+TGG | 0.473712 | 8.1:+5666100 | MS.gene57647:CDS |
| TATGGAGAGCTGATATCAAT+TGG | 0.477027 | 8.1:+5667674 | MS.gene57647:CDS |
| GGATGGATCAATTATGGAAT+GGG | 0.477988 | 8.1:+5665074 | MS.gene57647:CDS |
| CCAAGACGACCATTGCCAAT+GGG | 0.478151 | 8.1:-5662542 | None:intergenic |
| AACTGCAGCTCTCAAATTGT+CGG | 0.478299 | 8.1:+5662984 | MS.gene57647:CDS |
| GATCTTTGCAACAACTTTGG+TGG | 0.479941 | 8.1:-5667390 | None:intergenic |
| GGTGCAAGGTCCTCCACATA+AGG | 0.480757 | 8.1:+5662418 | MS.gene57647:CDS |
| TGTCTTGGCGGACCCTGAGC+AGG | 0.485401 | 8.1:+5665771 | MS.gene57647:CDS |
| CCCATTGGCAATGGTCGTCT+TGG | 0.486952 | 8.1:+5662542 | MS.gene57647:CDS |
| CTAATTGCTTGTTCACGTCC+TGG | 0.488943 | 8.1:+5664216 | MS.gene57647:CDS |
| CTATCAAAATCTATTTCATC+GGG | 0.490402 | 8.1:+5663993 | MS.gene57647:CDS |
| AAAACACTTGATTGTCTTGG+CGG | 0.491492 | 8.1:+5665759 | MS.gene57647:CDS |
| TGGGCAAATGGTTGTGTGAA+AGG | 0.495474 | 8.1:+5666060 | MS.gene57647:CDS |
| GATAAGAAGCTTAGAGTTGA+AGG | 0.495802 | 8.1:+5663808 | MS.gene57647:CDS |
| CCTCGGGATAAATGGGCAAA+TGG | 0.496290 | 8.1:+5666048 | MS.gene57647:CDS |
| GTTACAGGAGATGAAGGTCC+CGG | 0.498255 | 8.1:+5665667 | MS.gene57647:intron |
| CATTATGTTACAGGAGATGA+AGG | 0.498282 | 8.1:+5665661 | MS.gene57647:intron |
| GACAGGATCAACGGGGATGT+TGG | 0.499738 | 8.1:-5667342 | None:intergenic |
| GTCAACATCTGCTGGAAAGA+AGG | 0.503287 | 8.1:+5666108 | MS.gene57647:CDS |
| ATGGAGGATGTGCTGTGAAC+AGG | 0.504751 | 8.1:-5665828 | None:intergenic |
| CTTACTTCCTGCGCTGCCTC+GGG | 0.508430 | 8.1:+5666032 | MS.gene57647:CDS |
| GATAAAACACTTGATTGTCT+TGG | 0.511687 | 8.1:+5665756 | MS.gene57647:CDS |
| AAGGATTAAAAGCACGTGGC+GGG | 0.511813 | 8.1:+5666079 | MS.gene57647:CDS |
| GATGGCATCAGTCCAGTACT+TGG | 0.512637 | 8.1:-5662519 | None:intergenic |
| ACTATCAAAATCTATTTCAT+CGG | 0.514434 | 8.1:+5663992 | MS.gene57647:CDS |
| ACTACCATTGACTGACAAAG+AGG | 0.515252 | 8.1:-5664598 | None:intergenic |
| GGGTTCCACAAGTCCTTATG+TGG | 0.515502 | 8.1:-5662431 | None:intergenic |
| CTCATGTAGGTTGCAAGAAA+GGG | 0.516829 | 8.1:-5664547 | None:intergenic |
| ACTGCAGCTCTCAAATTGTC+GGG | 0.517930 | 8.1:+5662985 | MS.gene57647:CDS |
| GATTTGATTCTCGATGAAGT+TGG | 0.518466 | 8.1:-5664132 | None:intergenic |
| GGAGTGCCTATTGCATTTGG+TGG | 0.518848 | 8.1:+5667632 | MS.gene57647:CDS |
| ATTTGTTTGGCTTGTTTCCG+GGG | 0.520272 | 8.1:+5665299 | MS.gene57647:CDS |
| TTAGAGTTGAAGGTTCAGAT+TGG | 0.523034 | 8.1:+5663818 | MS.gene57647:CDS |
| CTGTATGCCACCCCAAATCA+TGG | 0.524612 | 8.1:-5662567 | None:intergenic |
| CATCTGCATTTGCTAAACTT+GGG | 0.525917 | 8.1:-5662451 | None:intergenic |
| GAGGAAATGTGATCAAATAG+TGG | 0.526093 | 8.1:-5664579 | None:intergenic |
| TCCAGATCTTTGTAAAGCTG+TGG | 0.528714 | 8.1:+5665345 | MS.gene57647:CDS |
| GACCCTGAGCAGGAAGCTGT+TGG | 0.531476 | 8.1:+5665781 | MS.gene57647:CDS |
| GCATCAGTCCAGTACTTGGC+AGG | 0.533349 | 8.1:-5662515 | None:intergenic |
| TCGATATTTATTGTGTGCCC+CGG | 0.534754 | 8.1:-5665316 | None:intergenic |
| GGGATGGATCAATTATGGAA+TGG | 0.536443 | 8.1:+5665073 | MS.gene57647:CDS |
| GAAGGTGATCTGCATGAAGT+TGG | 0.538771 | 8.1:+5666126 | MS.gene57647:CDS |
| CATTGCTTCCGACATTCTCA+GGG | 0.542406 | 8.1:+5667364 | MS.gene57647:CDS |
| TGAAGATTTATGTTCAAGTG+TGG | 0.542997 | 8.1:-5664507 | None:intergenic |
| TGGACTGATGCCATCCCCAT+TGG | 0.544755 | 8.1:+5662527 | MS.gene57647:CDS |
| ACCAAGACGACCATTGCCAA+TGG | 0.545373 | 8.1:-5662543 | None:intergenic |
| ACGACCATTGCCAATGGGGA+TGG | 0.551444 | 8.1:-5662537 | None:intergenic |
| AATTGATATCAGCTCTCCAT+AGG | 0.553233 | 8.1:-5667672 | None:intergenic |
| CTTTGTTCCATATACCCTGT+AGG | 0.553516 | 8.1:-5664254 | None:intergenic |
| ACACTATGGACTGGTATACC+TGG | 0.553528 | 8.1:+5662880 | MS.gene57647:CDS |
| GAGTGCCTATTGCATTTGGT+GGG | 0.560113 | 8.1:+5667633 | MS.gene57647:CDS |
| CAACGGGGATGTTGGTGAAG+AGG | 0.560879 | 8.1:-5667334 | None:intergenic |
| AACCAACAGCTTCCTGCTCA+GGG | 0.561258 | 8.1:-5665783 | None:intergenic |
| AGAATGTCGGAAGCAATGAC+AGG | 0.561473 | 8.1:-5667359 | None:intergenic |
| GTCCTCCACATAAGGACTTG+TGG | 0.569172 | 8.1:+5662426 | MS.gene57647:CDS |
| GGAAGCAATGACAGGATCAA+CGG | 0.572198 | 8.1:-5667351 | None:intergenic |
| GATTATAGTCTAATTAAAAG+AGG | 0.572479 | 8.1:+5665367 | MS.gene57647:CDS |
| GGAGAGCTGATATCAATTGG+CGG | 0.574098 | 8.1:+5667677 | MS.gene57647:CDS |
| GATGCCATCCCCATTGGCAA+TGG | 0.574840 | 8.1:+5662533 | MS.gene57647:CDS |
| AAGTTCGCGTCAATTTGGAA+TGG | 0.575095 | 8.1:-5665847 | None:intergenic |
| ACCTTATCCTGAAGGACTCA+AGG | 0.575347 | 8.1:+5667275 | MS.gene57647:intron |
| TTCGCGTCAATTTGGAATGG+AGG | 0.575642 | 8.1:-5665844 | None:intergenic |
| AACAAAAGCTCCACAACGGA+AGG | 0.576567 | 8.1:-5664174 | None:intergenic |
| TTTCCAAGTTGTTGACCACC+CGG | 0.580247 | 8.1:-5665686 | None:intergenic |
| TGATGTTTATGCTCGTCACT+TGG | 0.581330 | 8.1:+5663966 | MS.gene57647:CDS |
| ATCAGCTCTCCATAGGCAGC+CGG | 0.584190 | 8.1:-5667665 | None:intergenic |
| CGTCTTGGTGCCATGATTTG+GGG | 0.589784 | 8.1:+5662557 | MS.gene57647:CDS |
| ATTTGGTGGGACTGAAGAGC+CGG | 0.598688 | 8.1:+5667646 | MS.gene57647:CDS |
| TTGCGTTGCACTCACACGGG+TGG | 0.602556 | 8.1:-5667298 | None:intergenic |
| GGTGGCATCCCTGAGAATGT+CGG | 0.604831 | 8.1:-5667372 | None:intergenic |
| ACAGAGGACACACTATGGAC+TGG | 0.606130 | 8.1:+5662871 | MS.gene57647:intron |
| CAATGGTAGTAAAACTGCAA+AGG | 0.610567 | 8.1:+5664611 | MS.gene57647:CDS |
| CAACTTGGAAAGCTGCATTG+TGG | 0.614081 | 8.1:+5665698 | MS.gene57647:CDS |
| TTACAGGAGATGAAGGTCCC+GGG | 0.615350 | 8.1:+5665668 | MS.gene57647:intron |
| CATGCCGATGATGTACATCT+GGG | 0.627526 | 8.1:-5665270 | None:intergenic |
| TTCCAAGTTGTTGACCACCC+GGG | 0.628756 | 8.1:-5665685 | None:intergenic |
| GCATTGCGTTGCACTCACAC+GGG | 0.630770 | 8.1:-5667301 | None:intergenic |
| TGATGAAGATCCTTCCGTTG+TGG | 0.632061 | 8.1:+5664164 | MS.gene57647:CDS |
| ACTCAGGTGGCAAACCTACA+GGG | 0.633425 | 8.1:+5664240 | MS.gene57647:CDS |
| TTCCACAAGTCCTTATGTGG+AGG | 0.633472 | 8.1:-5662428 | None:intergenic |
| CTTGGTGCCATGATTTGGGG+TGG | 0.637211 | 8.1:+5662560 | MS.gene57647:CDS |
| AGGACCCAGATGTACATCAT+CGG | 0.638301 | 8.1:+5665266 | MS.gene57647:CDS |
| GTGGCTCTTGACACTCATGT+AGG | 0.641147 | 8.1:-5664560 | None:intergenic |
| AGTGTGTTACATACTTCACC+AGG | 0.642894 | 8.1:-5663012 | None:intergenic |
| TGTAGGTTGCAAGAAAGGGA+CGG | 0.643834 | 8.1:-5664543 | None:intergenic |
| GGAGAATGGATTATGGTGCA+AGG | 0.644352 | 8.1:+5662404 | MS.gene57647:CDS |
| ACTAACATATCTCAATTGAG+AGG | 0.644837 | 8.1:+5664096 | MS.gene57647:CDS |
| TTCACGTCCTGGAACTCAGG+TGG | 0.645681 | 8.1:+5664227 | MS.gene57647:CDS |
| AACATATCTCAATTGAGAGG+TGG | 0.647631 | 8.1:+5664099 | MS.gene57647:CDS |
| CCATTTGCCCATTTATCCCG+AGG | 0.650971 | 8.1:-5666048 | None:intergenic |
| CAAGACGACCATTGCCAATG+GGG | 0.655150 | 8.1:-5662541 | None:intergenic |
| AGGATTAAAAGCACGTGGCG+GGG | 0.657776 | 8.1:+5666080 | MS.gene57647:CDS |
| GTTGGTGAAGAGGTTCAAAG+TGG | 0.658271 | 8.1:-5667324 | None:intergenic |
| GCAGCGCAGGAAGTAAGTAG+AGG | 0.661819 | 8.1:-5666026 | None:intergenic |
| TTGGTGAAGAGGTTCAAAGT+GGG | 0.677235 | 8.1:-5667323 | None:intergenic |
| GCTTGTTCAAAGCACAACGA+AGG | 0.677962 | 8.1:+5666002 | MS.gene57647:CDS |
| TCTGAAGTTCTACAGCTCAA+CGG | 0.681667 | 8.1:+5662590 | MS.gene57647:CDS |
| AAAGGATTAAAAGCACGTGG+CGG | 0.688457 | 8.1:+5666078 | MS.gene57647:CDS |
| TTGAAACAAAAGCTCCACAA+CGG | 0.707270 | 8.1:-5664178 | None:intergenic |
| GTGAAAGGATTAAAAGCACG+TGG | 0.709520 | 8.1:+5666075 | MS.gene57647:CDS |
| CAGGAGATGAAGGTCCCGGG+TGG | 0.726183 | 8.1:+5665671 | MS.gene57647:intron |
| GTGTTACATACTTCACCAGG+AGG | 0.744967 | 8.1:-5663009 | None:intergenic |
| AAATGGACCATCAAACGACG+AGG | 0.768244 | 8.1:-5663863 | None:intergenic |
| AAGCAATGACAGGATCAACG+GGG | 0.795788 | 8.1:-5667349 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATAATGC+TGG | - | chr8.1:5663057-5663076 | None:intergenic | 10.0% |
| !!! | ATGTATACTAAATTTAATTT+TGG | - | chr8.1:5667132-5667151 | None:intergenic | 10.0% |
| !! | AGCAAAAATAAAATATAATG+TGG | + | chr8.1:5663496-5663515 | MS.gene57647:intron | 15.0% |
| !! | ATTTATAGAATTAAGATATC+AGG | + | chr8.1:5662743-5662762 | MS.gene57647:intron | 15.0% |
| !! | GCAAAAATAAAATATAATGT+GGG | + | chr8.1:5663497-5663516 | MS.gene57647:intron | 15.0% |
| !! | GTGATAAATAAATATGTAAA+AGG | + | chr8.1:5664330-5664349 | MS.gene57647:intron | 15.0% |
| !! | TAAATCTTCAAATGAATTAT+TGG | + | chr8.1:5664520-5664539 | MS.gene57647:CDS | 15.0% |
| !! | TTAAATTTAGTATACATATG+AGG | + | chr8.1:5667135-5667154 | MS.gene57647:intron | 15.0% |
| !! | TTAACAATAACAACATATTA+GGG | - | chr8.1:5666726-5666745 | None:intergenic | 15.0% |
| !! | TTCATTCAAAATAAAAAAAC+AGG | - | chr8.1:5663374-5663393 | None:intergenic | 15.0% |
| !! | TTTAACAATAACAACATATT+AGG | - | chr8.1:5666727-5666746 | None:intergenic | 15.0% |
| !! | TTTATAGAATTAAGATATCA+GGG | + | chr8.1:5662744-5662763 | MS.gene57647:intron | 15.0% |
| !!! | AAAAATCAAATAATAATGGA+AGG | + | chr8.1:5663662-5663681 | MS.gene57647:intron | 15.0% |
| !!! | AATTTTCCAATAAAATCTTA+AGG | + | chr8.1:5666314-5666333 | MS.gene57647:intron | 15.0% |
| !!! | ATGATTTTTTTCTTTTTTAG+AGG | + | chr8.1:5667172-5667191 | MS.gene57647:intron | 15.0% |
| !!! | TGATTTTTTTCTTTTTTAGA+GGG | + | chr8.1:5667173-5667192 | MS.gene57647:intron | 15.0% |
| !!! | TGTTTTTTTATTTTGAATGA+AGG | + | chr8.1:5663373-5663392 | MS.gene57647:intron | 15.0% |
| !!! | TTAAGATTTTATTGGAAAAT+TGG | - | chr8.1:5666315-5666334 | None:intergenic | 15.0% |
| !! | AAGTTTACTCGTATAATAAT+TGG | + | chr8.1:5666229-5666248 | MS.gene57647:intron | 20.0% |
| !! | ACATATTTATTTATCACTAG+AGG | - | chr8.1:5664327-5664346 | None:intergenic | 20.0% |
| !! | ACTATCAAAATCTATTTCAT+CGG | + | chr8.1:5663992-5664011 | MS.gene57647:CDS | 20.0% |
| !! | ATAAAATTTGATGTAGAATC+TGG | - | chr8.1:5667780-5667799 | None:intergenic | 20.0% |
| !! | ATATATATATAATGCTGGAA+GGG | - | chr8.1:5663052-5663071 | None:intergenic | 20.0% |
| !! | ATATTTATTTATCACTAGAG+GGG | - | chr8.1:5664325-5664344 | None:intergenic | 20.0% |
| !! | ATTATCATTTACAGTATCTT+TGG | + | chr8.1:5663604-5663623 | MS.gene57647:intron | 20.0% |
| !! | ATTCAAAATAAAAAAACAGG+AGG | - | chr8.1:5663371-5663390 | None:intergenic | 20.0% |
| !! | CAGCAAAAATCAAATAATAA+TGG | + | chr8.1:5663658-5663677 | MS.gene57647:intron | 20.0% |
| !! | CATATTTATTTATCACTAGA+GGG | - | chr8.1:5664326-5664345 | None:intergenic | 20.0% |
| !! | GATTATAGTCTAATTAAAAG+AGG | + | chr8.1:5665367-5665386 | MS.gene57647:CDS | 20.0% |
| !! | TAACAATAACAACATATTAG+GGG | - | chr8.1:5666725-5666744 | None:intergenic | 20.0% |
| !! | TATATATATATAATGCTGGA+AGG | - | chr8.1:5663053-5663072 | None:intergenic | 20.0% |
| !! | TCAAGAAAATTGAAATTACA+TGG | - | chr8.1:5663216-5663235 | None:intergenic | 20.0% |
| !! | TTATACTACATTCTCAAATT+AGG | + | chr8.1:5665531-5665550 | MS.gene57647:intron | 20.0% |
| !!! | AAAATTTTGGATTGTAAACT+AGG | + | chr8.1:5665192-5665211 | MS.gene57647:intron | 20.0% |
| !!! | AAATTTTGGATTGTAAACTA+GGG | + | chr8.1:5665193-5665212 | MS.gene57647:intron | 20.0% |
| !!! | ATAAGGTGTTAAATTTAACA+TGG | - | chr8.1:5665222-5665241 | None:intergenic | 20.0% |
| !!! | ATATGGAATTATGATTTTGA+AGG | - | chr8.1:5666673-5666692 | None:intergenic | 20.0% |
| !!! | ATGATTTTATTTGAATGTCA+TGG | + | chr8.1:5666951-5666970 | MS.gene57647:intron | 20.0% |
| !!! | GGAAAACAGTTATATTTTTA+GGG | - | chr8.1:5666294-5666313 | None:intergenic | 20.0% |
| !!! | GTATGCTTTTTAAATAACAA+AGG | - | chr8.1:5662824-5662843 | None:intergenic | 20.0% |
| !!! | TAGTTATCCTAATTTTTTCT+TGG | + | chr8.1:5664954-5664973 | MS.gene57647:intron | 20.0% |
| !!! | TGGAAAACAGTTATATTTTT+AGG | - | chr8.1:5666295-5666314 | None:intergenic | 20.0% |
| !!! | TTAAAAAGCATACTAATATG+AGG | + | chr8.1:5662831-5662850 | MS.gene57647:intron | 20.0% |
| !!! | TTTTTGATTTGATTTGAAGT+TGG | + | chr8.1:5666637-5666656 | MS.gene57647:intron | 20.0% |
| ! | AAATGAGACTACATTATAGA+GGG | + | chr8.1:5666175-5666194 | MS.gene57647:intron | 25.0% |
| ! | AACAATTGGATTGAAACATT+TGG | + | chr8.1:5667033-5667052 | MS.gene57647:intron | 25.0% |
| ! | ACACAATTACATTTAATTGG+AGG | - | chr8.1:5664786-5664805 | None:intergenic | 25.0% |
| ! | ACTATATTCATTAAAACCTC+CGG | + | chr8.1:5665483-5665502 | MS.gene57647:intron | 25.0% |
| ! | CACACACAATTACATTTAAT+TGG | - | chr8.1:5664789-5664808 | None:intergenic | 25.0% |
| ! | CACCAATATATCTTTAGTAA+TGG | - | chr8.1:5663307-5663326 | None:intergenic | 25.0% |
| ! | CTATCAAAATCTATTTCATC+GGG | + | chr8.1:5663993-5664012 | MS.gene57647:CDS | 25.0% |
| ! | CTCCATTACTAAAGATATAT+TGG | + | chr8.1:5663302-5663321 | MS.gene57647:intron | 25.0% |
| ! | GATAAAAAAGATACAACCTT+AGG | - | chr8.1:5665596-5665615 | None:intergenic | 25.0% |
| ! | TATTTATATATCATGCTCCT+TGG | - | chr8.1:5663186-5663205 | None:intergenic | 25.0% |
| ! | TATTTATTTATCACTAGAGG+GGG | - | chr8.1:5664324-5664343 | None:intergenic | 25.0% |
| ! | TCTATAATGTAGTCTCATTT+CGG | - | chr8.1:5666175-5666194 | None:intergenic | 25.0% |
| ! | TTAACATACACCTGATTAAT+AGG | - | chr8.1:5664744-5664763 | None:intergenic | 25.0% |
| ! | TTGACATTCTATGTTAGAAA+GGG | + | chr8.1:5664669-5664688 | MS.gene57647:intron | 25.0% |
| ! | TTGCAATGTTTAGAAAGTTT+GGG | + | chr8.1:5667105-5667124 | MS.gene57647:intron | 25.0% |
| !! | AAAAGGAGTTATACATGTTT+TGG | + | chr8.1:5663783-5663802 | MS.gene57647:CDS | 25.0% |
| !! | AAAAGTTCAAAGACTGTTTT+AGG | + | chr8.1:5664033-5664052 | MS.gene57647:CDS | 25.0% |
| !! | AATTTTGGATTGTAAACTAG+GGG | + | chr8.1:5665194-5665213 | MS.gene57647:intron | 25.0% |
| !! | ATATATCTTTAGTAATGGAG+TGG | - | chr8.1:5663302-5663321 | None:intergenic | 25.0% |
| !! | CTGATCTTCAATGAAAATTT+TGG | + | chr8.1:5665179-5665198 | MS.gene57647:intron | 25.0% |
| !! | TAACACCTTATTTATTTGAC+AGG | + | chr8.1:5665231-5665250 | MS.gene57647:intron | 25.0% |
| !! | TATATCTTTAGTAATGGAGT+GGG | - | chr8.1:5663301-5663320 | None:intergenic | 25.0% |
| !! | TATGTGATGATTTTGTTGAA+TGG | + | chr8.1:5667608-5667627 | MS.gene57647:CDS | 25.0% |
| !!! | ATTATGTAGTTTTGAAGACA+TGG | - | chr8.1:5667528-5667547 | None:intergenic | 25.0% |
| !!! | CAATGTATAGTTTAGTTTGA+AGG | - | chr8.1:5667751-5667770 | None:intergenic | 25.0% |
| !!! | CACAAACTTCATTTTTCTTA+AGG | - | chr8.1:5663929-5663948 | None:intergenic | 25.0% |
| !!! | CTATTTTTTAGACTGATATC+AGG | + | chr8.1:5663151-5663170 | MS.gene57647:intron | 25.0% |
| !!! | GTTTTAAATACAAGAAGGAT+AGG | + | chr8.1:5664808-5664827 | MS.gene57647:intron | 25.0% |
| !!! | TAGAAACTAGTTTCTAGTAT+TGG | - | chr8.1:5664936-5664955 | None:intergenic | 25.0% |
| !!! | TGTGTGTTTTAAATACAAGA+AGG | + | chr8.1:5664803-5664822 | MS.gene57647:intron | 25.0% |
| !!! | TGTTTTAGGAAAACCTATTT+TGG | + | chr8.1:5664047-5664066 | MS.gene57647:CDS | 25.0% |
| !!! | TTATGTAGTTTTGAAGACAT+GGG | - | chr8.1:5667527-5667546 | None:intergenic | 25.0% |
| !!! | TTCAATTTTTTTCTTCACAG+AGG | + | chr8.1:5662855-5662874 | MS.gene57647:intron | 25.0% |
| !!! | TTTTACAATTTGTTACGTAC+AGG | + | chr8.1:5666350-5666369 | MS.gene57647:intron | 25.0% |
| AAAGTTGTTGCAAAGATCAT+TGG | + | chr8.1:5667395-5667414 | MS.gene57647:intron | 30.0% | |
| AATGATCTTTGCAACAACTT+TGG | - | chr8.1:5667396-5667415 | None:intergenic | 30.0% | |
| AATTTCATCAAACAACTGGT+GGG | - | chr8.1:5667476-5667495 | None:intergenic | 30.0% | |
| ACAATAAACAAAGGAGGAAA+AGG | - | chr8.1:5667451-5667470 | None:intergenic | 30.0% | |
| ACTAACATATCTCAATTGAG+AGG | + | chr8.1:5664096-5664115 | MS.gene57647:CDS | 30.0% | |
| ATACAAGAAGGATAGGAATT+AGG | + | chr8.1:5664815-5664834 | MS.gene57647:intron | 30.0% | |
| ATACTGAAAGTCTTCAAGAT+TGG | - | chr8.1:5662644-5662663 | None:intergenic | 30.0% | |
| ATATATTGGTGCATGAGTTA+AGG | + | chr8.1:5663316-5663335 | MS.gene57647:intron | 30.0% | |
| ATATCACAGAGAACTTGATT+TGG | + | chr8.1:5663463-5663482 | MS.gene57647:intron | 30.0% | |
| ATCATCACATACTGAAACAA+AGG | - | chr8.1:5667599-5667618 | None:intergenic | 30.0% | |
| ATGAAGCTCAGTAATGAAAA+AGG | + | chr8.1:5663766-5663785 | MS.gene57647:intron | 30.0% | |
| ATGGGATAGAATATACTCTA+GGG | + | chr8.1:5666484-5666503 | MS.gene57647:intron | 30.0% | |
| ATTATACGAGTAAACTTTCC+CGG | - | chr8.1:5666226-5666245 | None:intergenic | 30.0% | |
| ATTCTATGTTAGAAAGGGAT+TGG | + | chr8.1:5664674-5664693 | MS.gene57647:intron | 30.0% | |
| ATTTAATATCGCCAAGAAGT+TGG | - | chr8.1:5663403-5663422 | None:intergenic | 30.0% | |
| ATTTATTTATCACTAGAGGG+GGG | - | chr8.1:5664323-5664342 | None:intergenic | 30.0% | |
| CAATAAACAAAGGAGGAAAA+GGG | - | chr8.1:5667450-5667469 | None:intergenic | 30.0% | |
| CATATTAGTGTTCTCATTCA+TGG | + | chr8.1:5663258-5663277 | MS.gene57647:intron | 30.0% | |
| CATTGAATTTGTCAGAATCA+TGG | + | chr8.1:5666921-5666940 | MS.gene57647:intron | 30.0% | |
| CATTTCTTGCATTATGTTAC+AGG | + | chr8.1:5665652-5665671 | MS.gene57647:intron | 30.0% | |
| CTAAAATAACTACTACGTCA+GGG | - | chr8.1:5665425-5665444 | None:intergenic | 30.0% | |
| CTAGAAAAAGTAACCTTCAA+GGG | - | chr8.1:5662494-5662513 | None:intergenic | 30.0% | |
| CTATATTCATTAAAACCTCC+GGG | + | chr8.1:5665484-5665503 | MS.gene57647:intron | 30.0% | |
| CTTAGAGTTTCTATATGGAT+AGG | + | chr8.1:5664397-5664416 | MS.gene57647:intron | 30.0% | |
| CTTGACATTCTATGTTAGAA+AGG | + | chr8.1:5664668-5664687 | MS.gene57647:intron | 30.0% | |
| GAAATGAGACTACATTATAG+AGG | + | chr8.1:5666174-5666193 | MS.gene57647:intron | 30.0% | |
| GAATTAAGATATCAGGGATA+AGG | + | chr8.1:5662750-5662769 | MS.gene57647:intron | 30.0% | |
| GACGAGAACAATCAAAATTT+AGG | - | chr8.1:5666848-5666867 | None:intergenic | 30.0% | |
| GAGTAATTTCATCAAACAAC+TGG | - | chr8.1:5667480-5667499 | None:intergenic | 30.0% | |
| GATAAAACACTTGATTGTCT+TGG | + | chr8.1:5665756-5665775 | MS.gene57647:CDS | 30.0% | |
| GGAGCATGATATATAAATAG+AGG | + | chr8.1:5663187-5663206 | MS.gene57647:intron | 30.0% | |
| GTTAAATATTTGCAAGCCAT+GGG | + | chr8.1:5666741-5666760 | MS.gene57647:intron | 30.0% | |
| GTTGCAATGTTTAGAAAGTT+TGG | + | chr8.1:5667104-5667123 | MS.gene57647:intron | 30.0% | |
| TAATTTCATCAAACAACTGG+TGG | - | chr8.1:5667477-5667496 | None:intergenic | 30.0% | |
| TCCTCCTATAAAAATTGCTA+GGG | + | chr8.1:5665053-5665072 | MS.gene57647:CDS | 30.0% | |
| TCTATTGCTTCTAGATTCTA+AGG | + | chr8.1:5664371-5664390 | MS.gene57647:intron | 30.0% | |
| TGAAGATTTATGTTCAAGTG+TGG | - | chr8.1:5664510-5664529 | None:intergenic | 30.0% | |
| TGTTAAATATTTGCAAGCCA+TGG | + | chr8.1:5666740-5666759 | MS.gene57647:intron | 30.0% | |
| TTAATTGGAGGTAATTGCTT+TGG | - | chr8.1:5664774-5664793 | None:intergenic | 30.0% | |
| TTCAGCCTGTCAAATAAATA+AGG | - | chr8.1:5665239-5665258 | None:intergenic | 30.0% | |
| TTCCCTATCTGTTATGAAAT+GGG | + | chr8.1:5666586-5666605 | MS.gene57647:intron | 30.0% | |
| TTCCTCCTATAAAAATTGCT+AGG | + | chr8.1:5665052-5665071 | MS.gene57647:CDS | 30.0% | |
| ! | ATATCTTTAGTAATGGAGTG+GGG | - | chr8.1:5663300-5663319 | None:intergenic | 30.0% |
| ! | ATTTTCTCTTCGTCCAAAAT+AGG | - | chr8.1:5664063-5664082 | None:intergenic | 30.0% |
| ! | CACGTTCCTTAAGATTTTAT+TGG | - | chr8.1:5666323-5666342 | None:intergenic | 30.0% |
| ! | CCTTGTCAAAAACAGATTTT+GGG | + | chr8.1:5664979-5664998 | MS.gene57647:intron | 30.0% |
| !! | CTCATAATTTTGAGTCACAT+TGG | + | chr8.1:5665927-5665946 | MS.gene57647:intron | 30.0% |
| !! | CTTCATTTTTCTTAAGGACT+CGG | - | chr8.1:5663923-5663942 | None:intergenic | 30.0% |
| !! | TTTTGATTGTTCTCGTCTAT+GGG | + | chr8.1:5666851-5666870 | MS.gene57647:intron | 30.0% |
| !!! | AATTCTGGTTTTTTGACCAA+AGG | - | chr8.1:5666152-5666171 | None:intergenic | 30.0% |
| !!! | ATTTTGATTGTTCTCGTCTA+TGG | + | chr8.1:5666850-5666869 | MS.gene57647:intron | 30.0% |
| !!! | CCAAAATCTGTTTTTGACAA+GGG | - | chr8.1:5664981-5665000 | None:intergenic | 30.0% |
| AAAACACTTGATTGTCTTGG+CGG | + | chr8.1:5665759-5665778 | MS.gene57647:CDS | 35.0% | |
| AAAACTTTGTCACTAGCACT+TGG | - | chr8.1:5663565-5663584 | None:intergenic | 35.0% | |
| AAACACTCACTTCTTGCTTT+CGG | + | chr8.1:5662616-5662635 | MS.gene57647:intron | 35.0% | |
| AACATATCTCAATTGAGAGG+TGG | + | chr8.1:5664099-5664118 | MS.gene57647:CDS | 35.0% | |
| AAGGAGGAAAAGGGTTAAAA+TGG | - | chr8.1:5667441-5667460 | None:intergenic | 35.0% | |
| AAGGGCTCAACAATAACAAT+TGG | + | chr8.1:5667019-5667038 | MS.gene57647:intron | 35.0% | |
| AATTCAAGTGACGAACCAAA+AGG | + | chr8.1:5663719-5663738 | MS.gene57647:intron | 35.0% | |
| AATTGATATCAGCTCTCCAT+AGG | - | chr8.1:5667675-5667694 | None:intergenic | 35.0% | |
| ACAAAGATGTTGTGCCTAAA+TGG | + | chr8.1:5664271-5664290 | MS.gene57647:CDS | 35.0% | |
| ACACTTGAAAGATGAAGAGA+AGG | - | chr8.1:5665127-5665146 | None:intergenic | 35.0% | |
| ACATACACCTGATTAATAGG+AGG | - | chr8.1:5664741-5664760 | None:intergenic | 35.0% | |
| ACCATCTTCAAAACACGAAT+TGG | + | chr8.1:5667235-5667254 | MS.gene57647:intron | 35.0% | |
| ACTACATTATAGAGGGAACA+AGG | + | chr8.1:5666182-5666201 | MS.gene57647:intron | 35.0% | |
| ATATCAGGAGTTAACAACCA+AGG | + | chr8.1:5663166-5663185 | MS.gene57647:intron | 35.0% | |
| ATCTGTTATGAAATGGGAGA+GGG | + | chr8.1:5666592-5666611 | MS.gene57647:intron | 35.0% | |
| ATTAGAAGCAAAATGCTCTC+TGG | - | chr8.1:5663537-5663556 | None:intergenic | 35.0% | |
| ATTTCCTCTTTGTCAGTCAA+TGG | + | chr8.1:5664594-5664613 | MS.gene57647:CDS | 35.0% | |
| CAAAGATGTTGTGCCTAAAT+GGG | + | chr8.1:5664272-5664291 | MS.gene57647:CDS | 35.0% | |
| CAAGGGACCAAGAAAAAATT+AGG | - | chr8.1:5664964-5664983 | None:intergenic | 35.0% | |
| CAATGGTAGTAAAACTGCAA+AGG | + | chr8.1:5664611-5664630 | MS.gene57647:CDS | 35.0% | |
| CATGGGATAGAATATACTCT+AGG | + | chr8.1:5666483-5666502 | MS.gene57647:intron | 35.0% | |
| CATGGGATAGGACTAATATT+AGG | + | chr8.1:5666758-5666777 | MS.gene57647:intron | 35.0% | |
| CATTATGTTACAGGAGATGA+AGG | + | chr8.1:5665661-5665680 | MS.gene57647:intron | 35.0% | |
| CCATTAAATTACATCTTCCC+AGG | - | chr8.1:5666445-5666464 | None:intergenic | 35.0% | |
| CCTAAAATAACTACTACGTC+AGG | - | chr8.1:5665426-5665445 | None:intergenic | 35.0% | |
| CCTAGAAAAAGTAACCTTCA+AGG | - | chr8.1:5662495-5662514 | None:intergenic | 35.0% | |
| CCTATAAAAATTGCTAGGGA+TGG | + | chr8.1:5665057-5665076 | MS.gene57647:CDS | 35.0% | |
| CCTGGGAAGATGTAATTTAA+TGG | + | chr8.1:5666442-5666461 | MS.gene57647:intron | 35.0% | |
| CGATTATCTTCTACATTACC+CGG | - | chr8.1:5665505-5665524 | None:intergenic | 35.0% | |
| CTAATATTAGTCCTATCCCA+TGG | - | chr8.1:5666760-5666779 | None:intergenic | 35.0% | |
| CTAGAGTATATTCTATCCCA+TGG | - | chr8.1:5666485-5666504 | None:intergenic | 35.0% | |
| CTCCCATTTCATAACAGATA+GGG | - | chr8.1:5666591-5666610 | None:intergenic | 35.0% | |
| CTTCCCTATCTGTTATGAAA+TGG | + | chr8.1:5666585-5666604 | MS.gene57647:intron | 35.0% | |
| GAGGAAATGTGATCAAATAG+TGG | - | chr8.1:5664582-5664601 | None:intergenic | 35.0% | |
| GATAAGAAGCTTAGAGTTGA+AGG | + | chr8.1:5663808-5663827 | MS.gene57647:CDS | 35.0% | |
| GATTTGATTCTCGATGAAGT+TGG | - | chr8.1:5664135-5664154 | None:intergenic | 35.0% | |
| GCAAATTACATCACAATACG+CGG | + | chr8.1:5663630-5663649 | MS.gene57647:intron | 35.0% | |
| GGATGGATCAATTATGGAAT+GGG | + | chr8.1:5665074-5665093 | MS.gene57647:CDS | 35.0% | |
| TACTAGACCTCCTATTAATC+AGG | + | chr8.1:5664731-5664750 | MS.gene57647:intron | 35.0% | |
| TAGAGTTGAAGGTTCAGATT+GGG | + | chr8.1:5663819-5663838 | MS.gene57647:CDS | 35.0% | |
| TATCTGTTATGAAATGGGAG+AGG | + | chr8.1:5666591-5666610 | MS.gene57647:intron | 35.0% | |
| TATGGAGAGCTGATATCAAT+TGG | + | chr8.1:5667674-5667693 | MS.gene57647:CDS | 35.0% | |
| TATTCGTAGTGTTTCCTCTA+TGG | - | chr8.1:5662790-5662809 | None:intergenic | 35.0% | |
| TCTCCCATTTCATAACAGAT+AGG | - | chr8.1:5666592-5666611 | None:intergenic | 35.0% | |
| TTAGAGTTGAAGGTTCAGAT+TGG | + | chr8.1:5663818-5663837 | MS.gene57647:CDS | 35.0% | |
| TTATACGAGTAAACTTTCCC+GGG | - | chr8.1:5666225-5666244 | None:intergenic | 35.0% | |
| TTCTCTGTGATATGACTCTT+CGG | - | chr8.1:5663456-5663475 | None:intergenic | 35.0% | |
| TTGAAACAAAAGCTCCACAA+CGG | - | chr8.1:5664181-5664200 | None:intergenic | 35.0% | |
| TTGTACACCAAAATGACCTA+AGG | + | chr8.1:5665577-5665596 | MS.gene57647:intron | 35.0% | |
| ! | AAGGGTTAAAATGGACTCAA+CGG | - | chr8.1:5667432-5667451 | None:intergenic | 35.0% |
| ! | AAGTTTGATAATCCTTGCCA+TGG | + | chr8.1:5666465-5666484 | MS.gene57647:intron | 35.0% |
| ! | ACTGTAAATGATAATGACCC+CGG | - | chr8.1:5663599-5663618 | None:intergenic | 35.0% |
| ! | AGTTTGATAATCCTTGCCAT+GGG | + | chr8.1:5666466-5666485 | MS.gene57647:intron | 35.0% |
| ! | ATGAAGGTATACCAACTTCT+TGG | + | chr8.1:5663389-5663408 | MS.gene57647:intron | 35.0% |
| ! | ATTGCTTCTAGATTCTAAGG+TGG | + | chr8.1:5664374-5664393 | MS.gene57647:intron | 35.0% |
| ! | CATCTGCATTTGCTAAACTT+GGG | - | chr8.1:5662454-5662473 | None:intergenic | 35.0% |
| ! | CCATCCCTAGCAATTTTTAT+AGG | - | chr8.1:5665060-5665079 | None:intergenic | 35.0% |
| ! | CCCTTGTCAAAAACAGATTT+TGG | + | chr8.1:5664978-5664997 | MS.gene57647:intron | 35.0% |
| ! | CTCAGTTTTGCATTAACACT+TGG | - | chr8.1:5667710-5667729 | None:intergenic | 35.0% |
| ! | GACTTCACACATTTTAGACA+AGG | - | chr8.1:5663344-5663363 | None:intergenic | 35.0% |
| ! | GATACAACCTTAGGTCATTT+TGG | - | chr8.1:5665587-5665606 | None:intergenic | 35.0% |
| ! | GGATCTTTCTTAGAGTTTTC+AGG | - | chr8.1:5663895-5663914 | None:intergenic | 35.0% |
| ! | GTGATGATTTTGTTGAATGG+TGG | + | chr8.1:5667611-5667630 | MS.gene57647:CDS | 35.0% |
| ! | TAAAATGGACTCAACGGATT+CGG | - | chr8.1:5667426-5667445 | None:intergenic | 35.0% |
| ! | TCATCTGCATTTGCTAAACT+TGG | - | chr8.1:5662455-5662474 | None:intergenic | 35.0% |
| ! | TCCCTAGCAATTTTTATAGG+AGG | - | chr8.1:5665057-5665076 | None:intergenic | 35.0% |
| ! | TGCAGAAACTGAATTCCTTT+TGG | - | chr8.1:5663737-5663756 | None:intergenic | 35.0% |
| ! | TGGGTAAGTCTTGTCTTTAA+CGG | + | chr8.1:5665870-5665889 | MS.gene57647:intron | 35.0% |
| ! | TTCTGTCATCGACAAGTTTT+CGG | - | chr8.1:5662948-5662967 | None:intergenic | 35.0% |
| !! | ACATTTGTTTGGCTTGTTTC+CGG | + | chr8.1:5665297-5665316 | MS.gene57647:CDS | 35.0% |
| !! | CCTGACGTAGTAGTTATTTT+AGG | + | chr8.1:5665423-5665442 | MS.gene57647:intron | 35.0% |
| !! | GAGTTTTCAGGATCAGTAAA+TGG | - | chr8.1:5663883-5663902 | None:intergenic | 35.0% |
| !! | GTGGAGCTTTTGTTTCAATA+CGG | + | chr8.1:5664183-5664202 | MS.gene57647:CDS | 35.0% |
| !! | TTAGGTCATTTTGGTGTACA+AGG | - | chr8.1:5665578-5665597 | None:intergenic | 35.0% |
| !!! | ACCAATTCGTGTTTTGAAGA+TGG | - | chr8.1:5667239-5667258 | None:intergenic | 35.0% |
| !!! | CCCAAAATCTGTTTTTGACA+AGG | - | chr8.1:5664982-5665001 | None:intergenic | 35.0% |
| !!! | CCTTGAAGGTTACTTTTTCT+AGG | + | chr8.1:5662492-5662511 | MS.gene57647:CDS | 35.0% |
| !!! | CTCTTTTTTTGTCATCCAGT+GGG | + | chr8.1:5664481-5664500 | MS.gene57647:intron | 35.0% |
| !!! | TCTCTTTTTTTGTCATCCAG+TGG | + | chr8.1:5664480-5664499 | MS.gene57647:intron | 35.0% |
| !!! | TCTTTTTTTGTCATCCAGTG+GGG | + | chr8.1:5664482-5664501 | MS.gene57647:intron | 35.0% |
| AACTGCAGCTCTCAAATTGT+CGG | + | chr8.1:5662984-5663003 | MS.gene57647:CDS | 40.0% | |
| AACTTGGAAAGCTGCATTGT+GGG | + | chr8.1:5665699-5665718 | MS.gene57647:CDS | 40.0% | |
| AAGTTCGCGTCAATTTGGAA+TGG | - | chr8.1:5665850-5665869 | None:intergenic | 40.0% | |
| ACAAGGTTGAACATGAACGA+GGG | - | chr8.1:5665561-5665580 | None:intergenic | 40.0% | |
| ACTCATGTAGGTTGCAAGAA+AGG | - | chr8.1:5664551-5664570 | None:intergenic | 40.0% | |
| AGACAAACACCTTATCCTGA+AGG | + | chr8.1:5667267-5667286 | MS.gene57647:intron | 40.0% | |
| AGTGTGTTACATACTTCACC+AGG | - | chr8.1:5663015-5663034 | None:intergenic | 40.0% | |
| ATATTTGCAAGCCATGGGAT+AGG | + | chr8.1:5666746-5666765 | MS.gene57647:intron | 40.0% | |
| CACTTGAATTCACTTGTGGA+GGG | - | chr8.1:5663709-5663728 | None:intergenic | 40.0% | |
| CAGTTTGTCAATGCTTGAAC+AGG | - | chr8.1:5666524-5666543 | None:intergenic | 40.0% | |
| CATAGTTCCTCATTAACTGC+TGG | - | chr8.1:5663131-5663150 | None:intergenic | 40.0% | |
| CGGCATGTTTCACATTTGTT+TGG | + | chr8.1:5665286-5665305 | MS.gene57647:CDS | 40.0% | |
| CTCATGTAGGTTGCAAGAAA+GGG | - | chr8.1:5664550-5664569 | None:intergenic | 40.0% | |
| CTTTGTTCCATATACCCTGT+AGG | - | chr8.1:5664257-5664276 | None:intergenic | 40.0% | |
| GATCTTTGCAACAACTTTGG+TGG | - | chr8.1:5667393-5667412 | None:intergenic | 40.0% | |
| GCAATACTTGAAACGAGTTG+TGG | - | chr8.1:5666998-5667017 | None:intergenic | 40.0% | |
| GGGAAAACATACTCCCATTT+AGG | - | chr8.1:5664288-5664307 | None:intergenic | 40.0% | |
| GGGATGGATCAATTATGGAA+TGG | + | chr8.1:5665073-5665092 | MS.gene57647:CDS | 40.0% | |
| GGTACCAAACATGTACTTAG+AGG | + | chr8.1:5666972-5666991 | MS.gene57647:intron | 40.0% | |
| GGTGGCTTAGAGTTTCTATA+TGG | + | chr8.1:5664392-5664411 | MS.gene57647:intron | 40.0% | |
| GTAGTCTCATTTCGGAATTC+TGG | - | chr8.1:5666167-5666186 | None:intergenic | 40.0% | |
| GTATATTCTATCCCATGGCA+AGG | - | chr8.1:5666480-5666499 | None:intergenic | 40.0% | |
| TACAAGGTTGAACATGAACG+AGG | - | chr8.1:5665562-5665581 | None:intergenic | 40.0% | |
| TCACTTGAATTCACTTGTGG+AGG | - | chr8.1:5663710-5663729 | None:intergenic | 40.0% | |
| TCATGCTGCATTATCCATAG+AGG | + | chr8.1:5662773-5662792 | MS.gene57647:intron | 40.0% | |
| TCCAAATTGACGCGAACTTT+GGG | + | chr8.1:5665851-5665870 | MS.gene57647:CDS | 40.0% | |
| TCCACAGCTTTACAAAGATC+TGG | - | chr8.1:5665349-5665368 | None:intergenic | 40.0% | |
| TCCAGATCTTTGTAAAGCTG+TGG | + | chr8.1:5665345-5665364 | MS.gene57647:CDS | 40.0% | |
| TCGATATTTATTGTGTGCCC+CGG | - | chr8.1:5665319-5665338 | None:intergenic | 40.0% | |
| TCGTCACTTGAATTCACTTG+TGG | - | chr8.1:5663713-5663732 | None:intergenic | 40.0% | |
| TGATGTTTATGCTCGTCACT+TGG | + | chr8.1:5663966-5663985 | MS.gene57647:CDS | 40.0% | |
| TGCTAGGGATGGATCAATTA+TGG | + | chr8.1:5665068-5665087 | MS.gene57647:CDS | 40.0% | |
| TGGGCAACAATAAACAAAGG+AGG | - | chr8.1:5667457-5667476 | None:intergenic | 40.0% | |
| TTAGGGATTCACTTCGCAAA+GGG | - | chr8.1:5666277-5666296 | None:intergenic | 40.0% | |
| TTATCTTCTACATTACCCGG+AGG | - | chr8.1:5665502-5665521 | None:intergenic | 40.0% | |
| TTCCAAATTGACGCGAACTT+TGG | + | chr8.1:5665850-5665869 | MS.gene57647:CDS | 40.0% | |
| TTCCTCATTAACTGCTGGAA+GGG | - | chr8.1:5663126-5663145 | None:intergenic | 40.0% | |
| TTGGTGAAGAGGTTCAAAGT+GGG | - | chr8.1:5667326-5667345 | None:intergenic | 40.0% | |
| TTTAGGGATTCACTTCGCAA+AGG | - | chr8.1:5666278-5666297 | None:intergenic | 40.0% | |
| TTTCTTAAGGACTCGGAAGT+AGG | - | chr8.1:5663916-5663935 | None:intergenic | 40.0% | |
| TTTGATCCAAAGTGCATGCT+GGG | + | chr8.1:5662680-5662699 | MS.gene57647:intron | 40.0% | |
| ! | AAAATGGACTCAACGGATTC+GGG | - | chr8.1:5667425-5667444 | None:intergenic | 40.0% |
| ! | AAAGGATTAAAAGCACGTGG+CGG | + | chr8.1:5666078-5666097 | MS.gene57647:CDS | 40.0% |
| ! | AAAGTTTTCCACCAGCAAAC+CGG | + | chr8.1:5663577-5663596 | MS.gene57647:intron | 40.0% |
| ! | ACGTACAGGAAGTAATTTGC+TGG | + | chr8.1:5666364-5666383 | MS.gene57647:intron | 40.0% |
| ! | ACTACCATTGACTGACAAAG+AGG | - | chr8.1:5664601-5664620 | None:intergenic | 40.0% |
| ! | ACTCGTTTCAAGTATTGCGA+AGG | + | chr8.1:5667000-5667019 | MS.gene57647:intron | 40.0% |
| ! | AGTCACATTGGCTGAGAAAA+TGG | + | chr8.1:5665939-5665958 | MS.gene57647:intron | 40.0% |
| ! | ATATACTCTAGGGACAGTTC+AGG | + | chr8.1:5666494-5666513 | MS.gene57647:intron | 40.0% |
| ! | ATTAACTGCTGGAAGGGTTT+TGG | - | chr8.1:5663120-5663139 | None:intergenic | 40.0% |
| ! | CTCGTTTCAAGTATTGCGAA+GGG | + | chr8.1:5667001-5667020 | MS.gene57647:intron | 40.0% |
| ! | GTGAAAGGATTAAAAGCACG+TGG | + | chr8.1:5666075-5666094 | MS.gene57647:CDS | 40.0% |
| ! | TATACTCTAGGGACAGTTCA+GGG | + | chr8.1:5666495-5666514 | MS.gene57647:intron | 40.0% |
| ! | TCTGAAGTTCTACAGCTCAA+CGG | + | chr8.1:5662590-5662609 | MS.gene57647:CDS | 40.0% |
| ! | TGGTGGGCAACAATAAACAA+AGG | - | chr8.1:5667460-5667479 | None:intergenic | 40.0% |
| ! | TTGACAGGCTGAAGATTTTC+AGG | + | chr8.1:5665246-5665265 | MS.gene57647:intron | 40.0% |
| ! | TTTTGATCCAAAGTGCATGC+TGG | + | chr8.1:5662679-5662698 | MS.gene57647:intron | 40.0% |
| !! | ATTTGTTTGGCTTGTTTCCG+GGG | + | chr8.1:5665299-5665318 | MS.gene57647:CDS | 40.0% |
| !! | CATTTGTTTGGCTTGTTTCC+GGG | + | chr8.1:5665298-5665317 | MS.gene57647:CDS | 40.0% |
| !! | CGTACAGGAAGTAATTTGCT+GGG | + | chr8.1:5666365-5666384 | MS.gene57647:intron | 40.0% |
| !! | GGAAGATGGAGAATGGATTA+TGG | + | chr8.1:5662397-5662416 | MS.gene57647:CDS | 40.0% |
| !!! | GTAGTTTTGAAGACATGGGT+TGG | - | chr8.1:5667523-5667542 | None:intergenic | 40.0% |
| AAATGGACCATCAAACGACG+AGG | - | chr8.1:5663866-5663885 | None:intergenic | 45.0% | |
| AACAAAAGCTCCACAACGGA+AGG | - | chr8.1:5664177-5664196 | None:intergenic | 45.0% | |
| AACCCTTCCAGCAGTTAATG+AGG | + | chr8.1:5663121-5663140 | MS.gene57647:intron | 45.0% | |
| AAGCAATGACAGGATCAACG+GGG | - | chr8.1:5667352-5667371 | None:intergenic | 45.0% | |
| ACATGCCGATGATGTACATC+TGG | - | chr8.1:5665274-5665293 | None:intergenic | 45.0% | |
| ACCCAAAGTTCGCGTCAATT+TGG | - | chr8.1:5665855-5665874 | None:intergenic | 45.0% | |
| ACCTTATCCTGAAGGACTCA+AGG | + | chr8.1:5667275-5667294 | MS.gene57647:intron | 45.0% | |
| ACTGCAGCTCTCAAATTGTC+GGG | + | chr8.1:5662985-5663004 | MS.gene57647:CDS | 45.0% | |
| AGAATGTCGGAAGCAATGAC+AGG | - | chr8.1:5667362-5667381 | None:intergenic | 45.0% | |
| AGGACCCAGATGTACATCAT+CGG | + | chr8.1:5665266-5665285 | MS.gene57647:CDS | 45.0% | |
| ATCAGTTCACCTCAGCAACA+TGG | - | chr8.1:5664900-5664919 | None:intergenic | 45.0% | |
| ATGACTCACAGTGGCAAAGA+AGG | + | chr8.1:5666877-5666896 | MS.gene57647:intron | 45.0% | |
| ATTTATCACTAGAGGGGGGA+TGG | - | chr8.1:5664319-5664338 | None:intergenic | 45.0% | |
| CAACTTGGAAAGCTGCATTG+TGG | + | chr8.1:5665698-5665717 | MS.gene57647:CDS | 45.0% | |
| CATGCCGATGATGTACATCT+GGG | - | chr8.1:5665273-5665292 | None:intergenic | 45.0% | |
| CATTGCTTCCGACATTCTCA+GGG | + | chr8.1:5667364-5667383 | MS.gene57647:CDS | 45.0% | |
| CTAATTGCTTGTTCACGTCC+TGG | + | chr8.1:5664216-5664235 | MS.gene57647:CDS | 45.0% | |
| CTCCATGAGTCATTTAGCCT+GGG | + | chr8.1:5666425-5666444 | MS.gene57647:intron | 45.0% | |
| CTTTGTCACTAGCACTTGGT+CGG | - | chr8.1:5663561-5663580 | None:intergenic | 45.0% | |
| GAAGCAATGACAGGATCAAC+GGG | - | chr8.1:5667353-5667372 | None:intergenic | 45.0% | |
| GAAGGTGATCTGCATGAAGT+TGG | + | chr8.1:5666126-5666145 | MS.gene57647:CDS | 45.0% | |
| GAGTGCCTATTGCATTTGGT+GGG | + | chr8.1:5667633-5667652 | MS.gene57647:CDS | 45.0% | |
| GCTTGTTCAAAGCACAACGA+AGG | + | chr8.1:5666002-5666021 | MS.gene57647:CDS | 45.0% | |
| GGAAGCAATGACAGGATCAA+CGG | - | chr8.1:5667354-5667373 | None:intergenic | 45.0% | |
| GGACAGTAGTACTAGAGTCT+AGG | + | chr8.1:5662704-5662723 | MS.gene57647:intron | 45.0% | |
| GGAGAGCTGATATCAATTGG+CGG | + | chr8.1:5667677-5667696 | MS.gene57647:CDS | 45.0% | |
| GTCAACATCTGCTGGAAAGA+AGG | + | chr8.1:5666108-5666127 | MS.gene57647:CDS | 45.0% | |
| GTCGTGGCAAATTTATCACC+CGG | + | chr8.1:5666204-5666223 | MS.gene57647:intron | 45.0% | |
| GTGGCCTCTAAGTACATGTT+TGG | - | chr8.1:5666979-5666998 | None:intergenic | 45.0% | |
| GTGTTACATACTTCACCAGG+AGG | - | chr8.1:5663012-5663031 | None:intergenic | 45.0% | |
| GTTCCTCATTAACTGCTGGA+AGG | - | chr8.1:5663127-5663146 | None:intergenic | 45.0% | |
| TATGGGATGATGACTCACAG+TGG | + | chr8.1:5666868-5666887 | MS.gene57647:intron | 45.0% | |
| TCAGTCCCACCAAATGCAAT+AGG | - | chr8.1:5667641-5667660 | None:intergenic | 45.0% | |
| TCATTGCTTCCGACATTCTC+AGG | + | chr8.1:5667363-5667382 | MS.gene57647:CDS | 45.0% | |
| TCGTGGCAAATTTATCACCC+GGG | + | chr8.1:5666205-5666224 | MS.gene57647:intron | 45.0% | |
| TCTCCATGAGTCATTTAGCC+TGG | + | chr8.1:5666424-5666443 | MS.gene57647:intron | 45.0% | |
| TCTTCACAGAGGACACACTA+TGG | + | chr8.1:5662866-5662885 | MS.gene57647:intron | 45.0% | |
| TGAACCTTCAATGCCCTTGA+AGG | + | chr8.1:5662478-5662497 | MS.gene57647:CDS | 45.0% | |
| TGATGAAGATCCTTCCGTTG+TGG | + | chr8.1:5664164-5664183 | MS.gene57647:CDS | 45.0% | |
| TGGCAAACCTACAGGGTATA+TGG | + | chr8.1:5664247-5664266 | MS.gene57647:CDS | 45.0% | |
| TGGGCAAATGGTTGTGTGAA+AGG | + | chr8.1:5666060-5666079 | MS.gene57647:CDS | 45.0% | |
| TGTAGGTTGCAAGAAAGGGA+CGG | - | chr8.1:5664546-5664565 | None:intergenic | 45.0% | |
| TTATAGAGGGAACAAGGTCG+TGG | + | chr8.1:5666188-5666207 | MS.gene57647:intron | 45.0% | |
| TTCCACAAGTCCTTATGTGG+AGG | - | chr8.1:5662431-5662450 | None:intergenic | 45.0% | |
| TTCCCAGGCTAAATGACTCA+TGG | - | chr8.1:5666430-5666449 | None:intergenic | 45.0% | |
| TTGATCCAAAGTGCATGCTG+GGG | + | chr8.1:5662681-5662700 | MS.gene57647:intron | 45.0% | |
| TTTCCAAGTTGTTGACCACC+CGG | - | chr8.1:5665689-5665708 | None:intergenic | 45.0% | |
| TTTGTCACTAGCACTTGGTC+GGG | - | chr8.1:5663560-5663579 | None:intergenic | 45.0% | |
| ! | AAGGATTAAAAGCACGTGGC+GGG | + | chr8.1:5666079-5666098 | MS.gene57647:CDS | 45.0% |
| ! | AAGTTTTCCACCAGCAAACC+GGG | + | chr8.1:5663578-5663597 | MS.gene57647:intron | 45.0% |
| ! | ATAATGGAAGGAAGCTGTCC+TGG | + | chr8.1:5663674-5663693 | MS.gene57647:intron | 45.0% |
| ! | GTTGGTGAAGAGGTTCAAAG+TGG | - | chr8.1:5667327-5667346 | None:intergenic | 45.0% |
| ! | TCTTTAGTAATGGAGTGGGG+TGG | - | chr8.1:5663297-5663316 | None:intergenic | 45.0% |
| ! | TTCGCGTCAATTTGGAATGG+AGG | - | chr8.1:5665847-5665866 | None:intergenic | 45.0% |
| ! | TTTTTGTCGGTGTAGTTGCC+AGG | - | chr8.1:5662901-5662920 | None:intergenic | 45.0% |
| !! | ACACTATGGACTGGTATACC+TGG | + | chr8.1:5662880-5662899 | MS.gene57647:CDS | 45.0% |
| !! | ATCTGCATGAAGTTGGCCTT+TGG | + | chr8.1:5666133-5666152 | MS.gene57647:CDS | 45.0% |
| !! | CTGATATCAATTGGCGGACT+TGG | + | chr8.1:5667683-5667702 | MS.gene57647:CDS | 45.0% |
| !! | GGAGAATGGATTATGGTGCA+AGG | + | chr8.1:5662404-5662423 | MS.gene57647:CDS | 45.0% |
| !! | GTAACCTTCAAGGGCATTGA+AGG | - | chr8.1:5662485-5662504 | None:intergenic | 45.0% |
| !! | TCGTCTTGGTGCCATGATTT+GGG | + | chr8.1:5662556-5662575 | MS.gene57647:CDS | 45.0% |
| !!! | CAGGAAGCTGTTGGTTTTGA+AGG | + | chr8.1:5665790-5665809 | MS.gene57647:CDS | 45.0% |
| !!! | CGCTTCAGGAGCATTTTTGT+CGG | - | chr8.1:5662914-5662933 | None:intergenic | 45.0% |
| !!! | GAAGCTGTTGGTTTTGAAGG+AGG | + | chr8.1:5665793-5665812 | MS.gene57647:CDS | 45.0% |
| AAACCAACAGCTTCCTGCTC+AGG | - | chr8.1:5665787-5665806 | None:intergenic | 50.0% | |
| AACCAACAGCTTCCTGCTCA+GGG | - | chr8.1:5665786-5665805 | None:intergenic | 50.0% | |
| AACTCAGGTGGCAAACCTAC+AGG | + | chr8.1:5664239-5664258 | MS.gene57647:CDS | 50.0% | |
| AAGGAAGCTGTCCTGGCAAA+AGG | + | chr8.1:5663681-5663700 | MS.gene57647:intron | 50.0% | |
| ACAGAGGACACACTATGGAC+TGG | + | chr8.1:5662871-5662890 | MS.gene57647:intron | 50.0% | |
| ACAGCTTCCTCGTCGTTTGA+TGG | + | chr8.1:5663856-5663875 | MS.gene57647:CDS | 50.0% | |
| ACCAAGACGACCATTGCCAA+TGG | - | chr8.1:5662546-5662565 | None:intergenic | 50.0% | |
| ACCAATCCACCATGTTGCTG+AGG | + | chr8.1:5664888-5664907 | MS.gene57647:intron | 50.0% | |
| ACTCAGGTGGCAAACCTACA+GGG | + | chr8.1:5664240-5664259 | MS.gene57647:CDS | 50.0% | |
| AGTTCACCTCAGCAACATGG+TGG | - | chr8.1:5664897-5664916 | None:intergenic | 50.0% | |
| ATGGAGGATGTGCTGTGAAC+AGG | - | chr8.1:5665831-5665850 | None:intergenic | 50.0% | |
| ATGGGAGAGGGACTCAGAAA+TGG | + | chr8.1:5666604-5666623 | MS.gene57647:intron | 50.0% | |
| CAAAAATGCTCCTGAAGCGC+TGG | + | chr8.1:5662915-5662934 | MS.gene57647:CDS | 50.0% | |
| CAAGACGACCATTGCCAATG+GGG | - | chr8.1:5662544-5662563 | None:intergenic | 50.0% | |
| CCAAGACGACCATTGCCAAT+GGG | - | chr8.1:5662545-5662564 | None:intergenic | 50.0% | |
| CCATTTGCCCATTTATCCCG+AGG | - | chr8.1:5666051-5666070 | None:intergenic | 50.0% | |
| CCTCGGGATAAATGGGCAAA+TGG | + | chr8.1:5666048-5666067 | MS.gene57647:CDS | 50.0% | |
| CTGTATGCCACCCCAAATCA+TGG | - | chr8.1:5662570-5662589 | None:intergenic | 50.0% | |
| GAGAGCTGCAGTTGTAGCTT+CGG | - | chr8.1:5662977-5662996 | None:intergenic | 50.0% | |
| GATGGCATCAGTCCAGTACT+TGG | - | chr8.1:5662522-5662541 | None:intergenic | 50.0% | |
| GCCTTGAGTCCTTCAGGATA+AGG | - | chr8.1:5667279-5667298 | None:intergenic | 50.0% | |
| GGGTTCCACAAGTCCTTATG+TGG | - | chr8.1:5662434-5662453 | None:intergenic | 50.0% | |
| GTCCTCCACATAAGGACTTG+TGG | + | chr8.1:5662426-5662445 | MS.gene57647:CDS | 50.0% | |
| GTGGCTCTTGACACTCATGT+AGG | - | chr8.1:5664563-5664582 | None:intergenic | 50.0% | |
| GTTACAGGAGATGAAGGTCC+CGG | + | chr8.1:5665667-5665686 | MS.gene57647:intron | 50.0% | |
| TCTTGCATGTTGCTACGCAC+AGG | + | chr8.1:5664856-5664875 | MS.gene57647:intron | 50.0% | |
| TGATCCAAAGTGCATGCTGG+GGG | + | chr8.1:5662682-5662701 | MS.gene57647:intron | 50.0% | |
| TTACAGGAGATGAAGGTCCC+GGG | + | chr8.1:5665668-5665687 | MS.gene57647:intron | 50.0% | |
| TTCCAAGTTGTTGACCACCC+GGG | - | chr8.1:5665688-5665707 | None:intergenic | 50.0% | |
| TTGTTCACGTCCTGGAACTC+AGG | + | chr8.1:5664224-5664243 | MS.gene57647:CDS | 50.0% | |
| TTTCTAGGCCTGCCAAGTAC+TGG | + | chr8.1:5662507-5662526 | MS.gene57647:CDS | 50.0% | |
| ! | AGGATTAAAAGCACGTGGCG+GGG | + | chr8.1:5666080-5666099 | MS.gene57647:CDS | 50.0% |
| ! | AGTTTTCCACCAGCAAACCG+GGG | + | chr8.1:5663579-5663598 | MS.gene57647:intron | 50.0% |
| ! | ATTTGGTGGGACTGAAGAGC+CGG | + | chr8.1:5667646-5667665 | MS.gene57647:CDS | 50.0% |
| ! | GGAGTGCCTATTGCATTTGG+TGG | + | chr8.1:5667632-5667651 | MS.gene57647:CDS | 50.0% |
| ! | GGTGGAGTGCCTATTGCATT+TGG | + | chr8.1:5667629-5667648 | MS.gene57647:CDS | 50.0% |
| ! | TGATAATGACCCCGGTTTGC+TGG | - | chr8.1:5663591-5663610 | None:intergenic | 50.0% |
| ! | TTAGTAATGGAGTGGGGTGG+AGG | - | chr8.1:5663294-5663313 | None:intergenic | 50.0% |
| !! | ACCTCAGCAACATGGTGGAT+TGG | - | chr8.1:5664892-5664911 | None:intergenic | 50.0% |
| !! | CGTCTTGGTGCCATGATTTG+GGG | + | chr8.1:5662557-5662576 | MS.gene57647:CDS | 50.0% |
| !! | GTCGTCTTGGTGCCATGATT+TGG | + | chr8.1:5662555-5662574 | MS.gene57647:CDS | 50.0% |
| !! | TCAGCAACATGGTGGATTGG+TGG | - | chr8.1:5664889-5664908 | None:intergenic | 50.0% |
| ACGACCATTGCCAATGGGGA+TGG | - | chr8.1:5662540-5662559 | None:intergenic | 55.0% | |
| ACTTACTTCCTGCGCTGCCT+CGG | + | chr8.1:5666031-5666050 | MS.gene57647:CDS | 55.0% | |
| AGAGGGGGGATGGAAAGTGA+AGG | - | chr8.1:5664309-5664328 | None:intergenic | 55.0% | |
| AGGTTTGCCACCTGAGTTCC+AGG | - | chr8.1:5664237-5664256 | None:intergenic | 55.0% | |
| ATCAGCTCTCCATAGGCAGC+CGG | - | chr8.1:5667668-5667687 | None:intergenic | 55.0% | |
| CCCATTGGCAATGGTCGTCT+TGG | + | chr8.1:5662542-5662561 | MS.gene57647:CDS | 55.0% | |
| CTCAAATTGTCGGGACCTCC+TGG | + | chr8.1:5662994-5663013 | MS.gene57647:CDS | 55.0% | |
| GACAGGATCAACGGGGATGT+TGG | - | chr8.1:5667345-5667364 | None:intergenic | 55.0% | |
| GAGGGGGGATGGAAAGTGAA+GGG | - | chr8.1:5664308-5664327 | None:intergenic | 55.0% | |
| GATCCAAAGTGCATGCTGGG+GGG | + | chr8.1:5662683-5662702 | MS.gene57647:intron | 55.0% | |
| GATGCCATCCCCATTGGCAA+TGG | + | chr8.1:5662533-5662552 | MS.gene57647:CDS | 55.0% | |
| GCAGCGCAGGAAGTAAGTAG+AGG | - | chr8.1:5666029-5666048 | None:intergenic | 55.0% | |
| GCATCAGTCCAGTACTTGGC+AGG | - | chr8.1:5662518-5662537 | None:intergenic | 55.0% | |
| GCATTGCGTTGCACTCACAC+GGG | - | chr8.1:5667304-5667323 | None:intergenic | 55.0% | |
| GGCATTGCGTTGCACTCACA+CGG | - | chr8.1:5667305-5667324 | None:intergenic | 55.0% | |
| GGGTGACAGTCAACATCTGC+TGG | + | chr8.1:5666100-5666119 | MS.gene57647:CDS | 55.0% | |
| GGTGCAAGGTCCTCCACATA+AGG | + | chr8.1:5662418-5662437 | MS.gene57647:CDS | 55.0% | |
| GGTGGCATCCCTGAGAATGT+CGG | - | chr8.1:5667375-5667394 | None:intergenic | 55.0% | |
| TGCGCTGCCTCGGGATAAAT+GGG | + | chr8.1:5666041-5666060 | MS.gene57647:CDS | 55.0% | |
| TGGACTGATGCCATCCCCAT+TGG | + | chr8.1:5662527-5662546 | MS.gene57647:CDS | 55.0% | |
| TTCACGTCCTGGAACTCAGG+TGG | + | chr8.1:5664227-5664246 | MS.gene57647:CDS | 55.0% | |
| ! | CAACGGGGATGTTGGTGAAG+AGG | - | chr8.1:5667337-5667356 | None:intergenic | 55.0% |
| ! | TGTGGAGGGATCCTTTTGCC+AGG | - | chr8.1:5663695-5663714 | None:intergenic | 55.0% |
| !! | CTTGGTGCCATGATTTGGGG+TGG | + | chr8.1:5662560-5662579 | MS.gene57647:CDS | 55.0% |
| !! | TAATGACCCCGGTTTGCTGG+TGG | - | chr8.1:5663588-5663607 | None:intergenic | 55.0% |
| ACTGAAGAGCCGGCTGCCTA+TGG | + | chr8.1:5667656-5667675 | MS.gene57647:CDS | 60.0% | |
| CATTTATCCCGAGGCAGCGC+AGG | - | chr8.1:5666042-5666061 | None:intergenic | 60.0% | |
| CTGCGCTGCCTCGGGATAAA+TGG | + | chr8.1:5666040-5666059 | MS.gene57647:CDS | 60.0% | |
| CTTACTTCCTGCGCTGCCTC+GGG | + | chr8.1:5666032-5666051 | MS.gene57647:CDS | 60.0% | |
| GACCCTGAGCAGGAAGCTGT+TGG | + | chr8.1:5665781-5665800 | MS.gene57647:CDS | 60.0% | |
| GTCCCGGGTGGTCAACAACT+TGG | + | chr8.1:5665683-5665702 | MS.gene57647:CDS | 60.0% | |
| GTTCAAGTGTGGAGCCCCAC+TGG | - | chr8.1:5664499-5664518 | None:intergenic | 60.0% | |
| TGTCCCCCCAGCATGCACTT+TGG | - | chr8.1:5662689-5662708 | None:intergenic | 60.0% | |
| TTGCGTTGCACTCACACGGG+TGG | - | chr8.1:5667301-5667320 | None:intergenic | 60.0% | |
| CAGGAGATGAAGGTCCCGGG+TGG | + | chr8.1:5665671-5665690 | MS.gene57647:intron | 65.0% | |
| CGGACTTCAGCCAGCGCTTC+AGG | - | chr8.1:5662928-5662947 | None:intergenic | 65.0% | |
| ! | CGGGTGGCCTTGAGTCCTTC+AGG | - | chr8.1:5667285-5667304 | None:intergenic | 65.0% |
| ! | TGTCTTGGCGGACCCTGAGC+AGG | + | chr8.1:5665771-5665790 | MS.gene57647:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 5662395 | 5667808 | 5662395 | ID=MS.gene57647 |
| chr8.1 | mRNA | 5662395 | 5667808 | 5662395 | ID=MS.gene57647.t1;Parent=MS.gene57647 |
| chr8.1 | exon | 5662395 | 5662611 | 5662395 | ID=MS.gene57647.t1.exon1;Parent=MS.gene57647.t1 |
| chr8.1 | CDS | 5662395 | 5662611 | 5662395 | ID=cds.MS.gene57647.t1;Parent=MS.gene57647.t1 |
| chr8.1 | exon | 5662875 | 5663020 | 5662875 | ID=MS.gene57647.t1.exon2;Parent=MS.gene57647.t1 |
| chr8.1 | CDS | 5662875 | 5663020 | 5662875 | ID=cds.MS.gene57647.t1;Parent=MS.gene57647.t1 |
| chr8.1 | exon | 5663772 | 5664295 | 5663772 | ID=MS.gene57647.t1.exon3;Parent=MS.gene57647.t1 |
| chr8.1 | CDS | 5663772 | 5664295 | 5663772 | ID=cds.MS.gene57647.t1;Parent=MS.gene57647.t1 |
| chr8.1 | exon | 5664500 | 5664632 | 5664500 | ID=MS.gene57647.t1.exon4;Parent=MS.gene57647.t1 |
| chr8.1 | CDS | 5664500 | 5664632 | 5664500 | ID=cds.MS.gene57647.t1;Parent=MS.gene57647.t1 |
| chr8.1 | exon | 5664994 | 5665095 | 5664994 | ID=MS.gene57647.t1.exon5;Parent=MS.gene57647.t1 |
| chr8.1 | CDS | 5664994 | 5665095 | 5664994 | ID=cds.MS.gene57647.t1;Parent=MS.gene57647.t1 |
| chr8.1 | exon | 5665253 | 5665388 | 5665253 | ID=MS.gene57647.t1.exon6;Parent=MS.gene57647.t1 |
| chr8.1 | CDS | 5665253 | 5665388 | 5665253 | ID=cds.MS.gene57647.t1;Parent=MS.gene57647.t1 |
| chr8.1 | exon | 5665674 | 5665872 | 5665674 | ID=MS.gene57647.t1.exon7;Parent=MS.gene57647.t1 |
| chr8.1 | CDS | 5665674 | 5665872 | 5665674 | ID=cds.MS.gene57647.t1;Parent=MS.gene57647.t1 |
| chr8.1 | exon | 5665978 | 5666154 | 5665978 | ID=MS.gene57647.t1.exon8;Parent=MS.gene57647.t1 |
| chr8.1 | CDS | 5665978 | 5666154 | 5665978 | ID=cds.MS.gene57647.t1;Parent=MS.gene57647.t1 |
| chr8.1 | exon | 5667289 | 5667397 | 5667289 | ID=MS.gene57647.t1.exon9;Parent=MS.gene57647.t1 |
| chr8.1 | CDS | 5667289 | 5667397 | 5667289 | ID=cds.MS.gene57647.t1;Parent=MS.gene57647.t1 |
| chr8.1 | exon | 5667608 | 5667808 | 5667608 | ID=MS.gene57647.t1.exon10;Parent=MS.gene57647.t1 |
| chr8.1 | CDS | 5667608 | 5667808 | 5667608 | ID=cds.MS.gene57647.t1;Parent=MS.gene57647.t1 |
| Gene Sequence |
| Protein sequence |
